View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17615_high_56 (Length: 247)

Name: NF17615_high_56
Description: NF17615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17615_high_56
NF17615_high_56
[»] chr4 (85 HSPs)
chr4 (1-172)||(46193405-46193576)
chr4 (1-172)||(22434179-22434350)
chr4 (1-170)||(2118295-2118464)
chr4 (1-173)||(11153145-11153317)
chr4 (1-172)||(45082798-45082969)
chr4 (1-175)||(23494817-23494991)
chr4 (1-174)||(15523233-15523406)
chr4 (1-174)||(51021170-51021342)
chr4 (1-174)||(54995067-54995240)
chr4 (1-173)||(25938045-25938217)
chr4 (1-172)||(25447247-25447418)
chr4 (1-175)||(20470885-20471059)
chr4 (1-175)||(4219933-4220107)
chr4 (1-169)||(18751602-18751770)
chr4 (1-172)||(12234703-12234874)
chr4 (1-169)||(48526555-48526723)
chr4 (9-170)||(46193788-46193948)
chr4 (46-174)||(33109883-33110011)
chr4 (1-155)||(12503453-12503607)
chr4 (9-170)||(23494445-23494605)
chr4 (9-174)||(25447619-25447783)
chr4 (9-170)||(33109686-33109846)
chr4 (9-173)||(15523617-15523780)
chr4 (9-172)||(11153530-11153692)
chr4 (12-170)||(4219559-4219716)
chr4 (12-178)||(12234323-12234488)
chr4 (9-175)||(25937667-25937832)
chr4 (8-173)||(22170319-22170482)
chr4 (9-170)||(38962202-38962362)
chr4 (9-175)||(22434561-22434724)
chr4 (10-173)||(48526195-48526356)
chr4 (58-175)||(18763951-18764068)
chr4 (9-175)||(51020794-51020959)
chr4 (57-174)||(54995498-54995614)
chr4 (9-176)||(45082428-45082592)
chr4 (44-173)||(10258304-10258433)
chr4 (55-171)||(20958288-20958403)
chr4 (9-169)||(2118679-2118837)
chr4 (58-174)||(48293592-48293708)
chr4 (55-154)||(43243708-43243807)
chr4 (55-172)||(35363028-35363146)
chr4 (58-174)||(48713777-48713893)
chr4 (46-169)||(16690939-16691062)
chr4 (55-178)||(44892576-44892699)
chr4 (66-174)||(48708293-48708401)
chr4 (46-172)||(48294961-48295088)
chr4 (46-154)||(43281210-43281317)
chr4 (46-172)||(16691491-16691616)
chr4 (60-165)||(20957196-20957301)
chr4 (46-171)||(44890518-44890643)
chr4 (9-173)||(17503973-17504135)
chr4 (9-104)||(12503819-12503913)
chr4 (102-173)||(16318251-16318322)
chr4 (46-179)||(30597940-30598072)
chr4 (1-169)||(40160467-40160633)
chr4 (46-114)||(43242328-43242396)
chr4 (64-172)||(55189528-55189636)
chr4 (11-179)||(34789375-34789542)
chr4 (11-175)||(12593409-12593572)
chr4 (11-176)||(34789768-34789933)
chr4 (11-174)||(46737041-46737203)
chr4 (11-173)||(12593023-12593184)
chr4 (11-174)||(19528867-19529030)
chr4 (11-170)||(24336149-24336307)
chr4 (11-174)||(34807114-34807277)
chr4 (11-169)||(14439831-14439988)
chr4 (11-177)||(28465467-28465632)
chr4 (9-135)||(35193345-35193469)
chr4 (11-173)||(55677343-55677505)
chr4 (9-73)||(17504343-17504407)
chr4 (12-176)||(35193691-35193852)
chr4 (55-111)||(44220805-44220861)
chr4 (11-169)||(229545-229702)
chr4 (11-173)||(21034622-21034784)
chr4 (89-175)||(33689826-33689912)
chr4 (11-170)||(54440573-54440729)
chr4 (11-174)||(229159-229321)
chr4 (91-175)||(45838544-45838628)
chr4 (119-170)||(44219377-44219428)
chr4 (119-177)||(41608908-41608966)
chr4 (11-175)||(28465078-28465241)
chr4 (61-169)||(55191208-55191318)
chr4 (11-172)||(56077710-56077870)
chr4 (11-170)||(24851851-24852010)
chr4 (9-173)||(40160093-40160255)
[»] chr8 (46 HSPs)
chr8 (1-173)||(13225013-13225185)
chr8 (1-176)||(19176286-19176461)
chr8 (11-173)||(11656841-11657003)
chr8 (1-169)||(12572225-12572393)
chr8 (1-173)||(44831246-44831418)
chr8 (1-172)||(41681508-41681679)
chr8 (1-169)||(9928912-9929080)
chr8 (21-175)||(34540942-34541096)
chr8 (2-170)||(33328515-33328683)
chr8 (1-171)||(31133594-31133764)
chr8 (1-175)||(33742919-33743092)
chr8 (9-175)||(19176673-19176838)
chr8 (12-174)||(41681132-41681292)
chr8 (9-173)||(9930040-9930203)
chr8 (9-175)||(11656452-11656618)
chr8 (21-174)||(4629795-4629948)
chr8 (9-175)||(12571860-12572026)
chr8 (9-174)||(31133218-31133382)
chr8 (9-182)||(44831628-44831800)
chr8 (9-169)||(33328161-33328320)
chr8 (9-168)||(13224645-13224802)
chr8 (9-172)||(9178019-9178180)
chr8 (64-174)||(11336959-11337069)
chr8 (9-169)||(4630175-4630328)
chr8 (60-173)||(8073985-8074097)
chr8 (46-175)||(10918123-10918252)
chr8 (1-80)||(9177724-9177803)
chr8 (9-120)||(33743302-33743412)
chr8 (11-171)||(28254812-28254971)
chr8 (11-175)||(5730814-5730977)
chr8 (11-176)||(35427198-35427362)
chr8 (46-93)||(43958264-43958311)
chr8 (91-177)||(15255848-15255934)
chr8 (29-175)||(16578105-16578250)
chr8 (11-175)||(6115496-6115660)
chr8 (12-172)||(18049590-18049750)
chr8 (139-174)||(9177665-9177700)
chr8 (11-178)||(9796720-9796886)
chr8 (11-173)||(599531-599692)
chr8 (11-169)||(18428147-18428305)
chr8 (9-67)||(18805267-18805324)
chr8 (132-173)||(10919691-10919732)
chr8 (9-169)||(28877274-28877432)
chr8 (11-181)||(41260647-41260816)
chr8 (125-175)||(43958206-43958256)
chr8 (11-171)||(42035773-42035932)
[»] chr7 (51 HSPs)
chr7 (1-175)||(19590899-19591073)
chr7 (1-175)||(38859015-38859189)
chr7 (1-174)||(2658837-2659010)
chr7 (1-174)||(32004612-32004785)
chr7 (1-172)||(35288903-35289074)
chr7 (13-175)||(37787153-37787315)
chr7 (1-174)||(34533789-34533962)
chr7 (1-173)||(19830794-19830965)
chr7 (2-176)||(23952726-23952901)
chr7 (1-169)||(4641818-4641983)
chr7 (11-159)||(29099863-29100011)
chr7 (9-174)||(19830418-19830582)
chr7 (9-173)||(37786766-37786929)
chr7 (9-172)||(19590525-19590687)
chr7 (9-172)||(32004997-32005159)
chr7 (9-169)||(29100234-29100393)
chr7 (9-173)||(38858642-38858805)
chr7 (56-175)||(38160948-38161067)
chr7 (9-179)||(35289284-35289453)
chr7 (9-174)||(34534174-34534338)
chr7 (9-177)||(2659223-2659390)
chr7 (9-169)||(4641443-4641602)
chr7 (9-179)||(23953112-23953280)
chr7 (9-174)||(4478083-4478247)
chr7 (46-174)||(28583437-28583565)
chr7 (46-171)||(28584341-28584466)
chr7 (13-172)||(4477702-4477860)
chr7 (11-170)||(9181534-9181692)
chr7 (11-173)||(34595158-34595319)
chr7 (33-173)||(49064033-49064171)
chr7 (11-175)||(7732485-7732648)
chr7 (11-172)||(27245203-27245364)
chr7 (11-175)||(48247977-48248141)
chr7 (11-169)||(26026320-26026478)
chr7 (12-170)||(9393738-9393894)
chr7 (11-169)||(25637584-25637741)
chr7 (12-176)||(25637193-25637357)
chr7 (9-169)||(35578902-35579060)
chr7 (91-178)||(5334284-5334371)
chr7 (91-173)||(39136998-39137080)
chr7 (11-171)||(15712366-15712525)
chr7 (91-174)||(787251-787334)
chr7 (89-172)||(26048409-26048492)
chr7 (44-175)||(33880617-33880748)
chr7 (96-171)||(39388738-39388813)
chr7 (11-173)||(786781-786943)
chr7 (11-173)||(16081685-16081846)
chr7 (9-67)||(32427404-32427461)
chr7 (11-175)||(48247584-48247751)
chr7 (22-173)||(7732884-7733034)
chr7 (89-173)||(11971333-11971417)
[»] chr6 (43 HSPs)
chr6 (1-175)||(12935154-12935328)
chr6 (1-175)||(11445361-11445535)
chr6 (1-175)||(22219727-22219901)
chr6 (9-169)||(10899942-10900102)
chr6 (1-174)||(23075502-23075675)
chr6 (1-173)||(31470314-31470486)
chr6 (1-173)||(20741475-20741650)
chr6 (9-174)||(20741098-20741262)
chr6 (1-169)||(18504922-18505090)
chr6 (1-176)||(2319668-2319842)
chr6 (1-172)||(18257511-18257682)
chr6 (9-174)||(18257135-18257299)
chr6 (9-172)||(10900313-10900475)
chr6 (11-173)||(11276589-11276751)
chr6 (9-175)||(28472634-28472798)
chr6 (9-175)||(29859823-29859987)
chr6 (1-171)||(15827639-15827810)
chr6 (9-172)||(11276965-11277127)
chr6 (9-173)||(15828024-15828187)
chr6 (9-175)||(11444984-11445149)
chr6 (9-177)||(1149814-1149982)
chr6 (9-174)||(12935540-12935704)
chr6 (10-171)||(31470700-31470860)
chr6 (11-172)||(4811641-4811801)
chr6 (9-169)||(2322602-2322760)
chr6 (75-173)||(23073998-23074096)
chr6 (12-171)||(18505305-18505463)
chr6 (46-170)||(29033436-29033560)
chr6 (9-172)||(4811372-4811534)
chr6 (59-170)||(29035069-29035180)
chr6 (84-174)||(1149463-1149553)
chr6 (46-178)||(3835145-3835277)
chr6 (55-175)||(18296142-18296262)
chr6 (12-175)||(5120856-5121018)
chr6 (11-173)||(35163572-35163734)
chr6 (11-173)||(31574111-31574272)
chr6 (11-172)||(31073528-31073688)
chr6 (116-172)||(22534214-22534270)
chr6 (11-172)||(25472398-25472559)
chr6 (9-172)||(32836381-32836542)
chr6 (11-173)||(5114467-5114628)
chr6 (9-59)||(32836114-32836163)
chr6 (11-79)||(31573817-31573885)
[»] chr2 (63 HSPs)
chr2 (1-171)||(239726-239896)
chr2 (1-180)||(43058707-43058885)
chr2 (1-174)||(22374699-22374872)
chr2 (1-169)||(40027514-40027682)
chr2 (1-173)||(18450829-18451001)
chr2 (1-173)||(28616988-28617160)
chr2 (1-175)||(7446720-7446894)
chr2 (9-175)||(26538461-26538627)
chr2 (1-174)||(1978483-1978656)
chr2 (1-170)||(40815347-40815516)
chr2 (1-174)||(11090894-11091067)
chr2 (9-174)||(11090519-11090683)
chr2 (12-172)||(3025848-3026006)
chr2 (1-169)||(8425358-8425525)
chr2 (11-175)||(14432525-14432689)
chr2 (9-176)||(239349-239514)
chr2 (9-175)||(18451214-18451379)
chr2 (9-174)||(22374318-22374482)
chr2 (9-175)||(40815728-40815893)
chr2 (9-169)||(8425743-8425902)
chr2 (9-173)||(40027139-40027302)
chr2 (9-172)||(28616613-28616776)
chr2 (9-174)||(1978106-1978270)
chr2 (9-169)||(14432145-14432304)
chr2 (9-173)||(26538096-26538259)
chr2 (46-173)||(20444748-20444875)
chr2 (9-172)||(43058333-43058495)
chr2 (9-177)||(3025461-3025627)
chr2 (54-174)||(28847122-28847242)
chr2 (15-173)||(7446341-7446497)
chr2 (57-175)||(20440461-20440579)
chr2 (46-172)||(35779708-35779834)
chr2 (57-171)||(35781093-35781207)
chr2 (46-170)||(8972239-8972363)
chr2 (59-170)||(15551501-15551612)
chr2 (55-170)||(15552482-15552596)
chr2 (9-176)||(28143414-28143579)
chr2 (9-174)||(14942228-14942394)
chr2 (13-173)||(31797166-31797324)
chr2 (11-172)||(4355755-4355915)
chr2 (11-175)||(62954-63117)
chr2 (11-175)||(20128123-20128286)
chr2 (12-175)||(38007947-38008110)
chr2 (11-174)||(44219642-44219804)
chr2 (11-172)||(42192240-42192400)
chr2 (11-173)||(42192628-42192790)
chr2 (11-173)||(43216095-43216256)
chr2 (11-173)||(11539636-11539798)
chr2 (11-176)||(15550669-15550834)
chr2 (11-176)||(16175735-16175900)
chr2 (33-172)||(6949850-6949990)
chr2 (11-171)||(16953320-16953479)
chr2 (11-175)||(33920997-33921161)
chr2 (11-173)||(32418158-32418317)
chr2 (11-173)||(6949450-6949612)
chr2 (82-176)||(25336056-25336150)
chr2 (11-173)||(38008337-38008498)
chr2 (11-174)||(43160007-43160170)
chr2 (12-173)||(43160397-43160558)
chr2 (80-162)||(2190530-2190612)
chr2 (11-173)||(20127735-20127897)
chr2 (91-176)||(24140139-24140224)
chr2 (97-169)||(3824179-3824251)
[»] chr5 (66 HSPs)
chr5 (1-174)||(19359510-19359683)
chr5 (1-174)||(5818927-5819100)
chr5 (1-175)||(8647812-8647986)
chr5 (1-183)||(16018961-16019142)
chr5 (1-170)||(2864756-2864925)
chr5 (1-173)||(8461305-8461477)
chr5 (1-173)||(25000463-25000635)
chr5 (1-170)||(14215243-14215412)
chr5 (1-173)||(29454739-29454911)
chr5 (1-174)||(18182968-18183141)
chr5 (1-175)||(24331556-24331732)
chr5 (1-172)||(164191-164361)
chr5 (9-172)||(8647438-8647600)
chr5 (9-172)||(19359136-19359298)
chr5 (12-170)||(15371873-15372030)
chr5 (9-175)||(18183352-18183517)
chr5 (9-174)||(2865138-2865302)
chr5 (9-173)||(29455125-29455288)
chr5 (1-172)||(15709343-15709513)
chr5 (10-172)||(5819313-5819474)
chr5 (9-174)||(24362219-24362383)
chr5 (9-175)||(15372256-15372421)
chr5 (9-175)||(15708968-15709132)
chr5 (9-174)||(8460928-8461092)
chr5 (9-174)||(14463904-14464067)
chr5 (9-175)||(14215626-14215791)
chr5 (1-166)||(24361843-24362007)
chr5 (1-166)||(24325218-24325382)
chr5 (9-175)||(164574-164739)
chr5 (55-173)||(16018588-16018705)
chr5 (55-171)||(4222150-4222266)
chr5 (46-172)||(7349436-7349562)
chr5 (55-172)||(4623148-4623265)
chr5 (10-150)||(25000112-25000251)
chr5 (46-172)||(7348559-7348685)
chr5 (55-172)||(4219663-4219780)
chr5 (44-171)||(6018315-6018441)
chr5 (11-90)||(14462686-14462769)
chr5 (9-170)||(24331943-24332107)
chr5 (9-173)||(41834443-41834606)
chr5 (1-171)||(10721787-10721955)
chr5 (46-166)||(6019189-6019309)
chr5 (11-174)||(28290030-28290192)
chr5 (11-173)||(28289683-28289844)
chr5 (46-159)||(4624644-4624757)
chr5 (11-174)||(15029695-15029857)
chr5 (1-173)||(27307060-27307230)
chr5 (9-109)||(32305881-32305979)
chr5 (11-170)||(16752955-16753114)
chr5 (11-177)||(28494839-28495003)
chr5 (11-172)||(19291356-19291517)
chr5 (9-181)||(16752573-16752743)
chr5 (11-170)||(22651347-22651505)
chr5 (9-73)||(28495225-28495288)
chr5 (12-171)||(8419008-8419165)
chr5 (91-169)||(4966819-4966897)
chr5 (10-67)||(27307443-27307499)
chr5 (89-177)||(15115555-15115643)
chr5 (11-175)||(21371082-21371245)
chr5 (55-90)||(13814155-13814190)
chr5 (11-174)||(18150109-18150272)
chr5 (44-175)||(20266333-20266464)
chr5 (91-174)||(22651776-22651859)
chr5 (173-206)||(5501739-5501772)
chr5 (31-168)||(38900648-38900784)
chr5 (149-181)||(4967294-4967326)
[»] chr3 (92 HSPs)
chr3 (1-178)||(5137355-5137532)
chr3 (1-173)||(39555577-39555749)
chr3 (1-172)||(25853234-25853405)
chr3 (1-173)||(20840935-20841107)
chr3 (1-172)||(37727304-37727475)
chr3 (1-174)||(4275738-4275911)
chr3 (1-180)||(29801790-29801969)
chr3 (1-173)||(30098137-30098309)
chr3 (1-173)||(31778652-31778824)
chr3 (1-175)||(43973814-43973988)
chr3 (1-176)||(17464487-17464662)
chr3 (1-172)||(23644839-23645010)
chr3 (2-169)||(32534962-32535129)
chr3 (1-174)||(26837358-26837531)
chr3 (1-173)||(27393660-27393832)
chr3 (1-175)||(22424811-22424985)
chr3 (9-172)||(39555960-39556122)
chr3 (9-175)||(20840557-20840722)
chr3 (8-174)||(31779034-31779199)
chr3 (9-174)||(5136978-5137142)
chr3 (1-169)||(26274570-26274738)
chr3 (1-169)||(41047073-41047239)
chr3 (9-175)||(24300939-24301104)
chr3 (1-169)||(24300560-24300727)
chr3 (16-179)||(48452982-48453144)
chr3 (9-173)||(23644461-23644624)
chr3 (9-169)||(41046703-41046862)
chr3 (9-173)||(27393960-27394123)
chr3 (9-173)||(37726928-37727091)
chr3 (9-175)||(30104479-30104643)
chr3 (9-172)||(32535342-32535508)
chr3 (46-169)||(25612396-25612519)
chr3 (9-172)||(43973441-43973603)
chr3 (9-175)||(26837739-26837903)
chr3 (9-170)||(25853610-25853770)
chr3 (55-171)||(32697128-32697244)
chr3 (9-179)||(17464874-17465044)
chr3 (22-168)||(22425209-22425354)
chr3 (46-172)||(23228427-23228552)
chr3 (55-172)||(29801356-29801473)
chr3 (46-175)||(51474753-51474882)
chr3 (58-171)||(51473429-51473542)
chr3 (46-172)||(50116828-50116954)
chr3 (61-174)||(45965936-45966049)
chr3 (9-175)||(26274950-26275114)
chr3 (46-170)||(25420560-25420684)
chr3 (55-174)||(37220555-37220674)
chr3 (97-174)||(37222041-37222118)
chr3 (9-176)||(36701480-36701646)
chr3 (75-171)||(25419145-25419242)
chr3 (58-153)||(18010176-18010271)
chr3 (9-176)||(27200076-27200241)
chr3 (11-173)||(51827956-51828117)
chr3 (11-174)||(55389603-55389765)
chr3 (1-171)||(37076050-37076219)
chr3 (11-181)||(49720362-49720531)
chr3 (10-175)||(50900913-50901076)
chr3 (11-176)||(52237203-52237367)
chr3 (58-169)||(32695706-32695817)
chr3 (11-177)||(52375717-52375882)
chr3 (9-175)||(49407793-49407957)
chr3 (9-67)||(55192222-55192279)
chr3 (11-174)||(47431694-47431857)
chr3 (11-169)||(22370599-22370757)
chr3 (9-79)||(37075781-37075850)
chr3 (11-172)||(40275093-40275255)
chr3 (11-172)||(50662798-50662958)
chr3 (12-173)||(330223-330383)
chr3 (11-173)||(14654577-14654736)
chr3 (9-171)||(49408167-49408326)
chr3 (11-78)||(8873784-8873850)
chr3 (11-173)||(25534889-25535051)
chr3 (11-169)||(44676858-44677015)
chr3 (11-169)||(40839038-40839195)
chr3 (11-172)||(49951932-49952092)
chr3 (11-173)||(51828538-51828700)
chr3 (11-84)||(2323466-2323538)
chr3 (11-172)||(51828343-51828504)
chr3 (58-173)||(23227261-23227370)
chr3 (11-175)||(38535306-38535469)
chr3 (11-114)||(32730775-32730877)
chr3 (11-174)||(41998227-41998390)
chr3 (11-173)||(46013421-46013582)
chr3 (141-179)||(25611491-25611529)
chr3 (91-173)||(41998693-41998775)
chr3 (11-169)||(49951549-49951706)
chr3 (11-173)||(51472854-51473015)
chr3 (11-169)||(51473241-51473399)
chr3 (11-172)||(43222390-43222550)
chr3 (9-73)||(37847204-37847267)
chr3 (126-178)||(40275593-40275645)
chr3 (89-173)||(49720824-49720908)
[»] chr1 (63 HSPs)
chr1 (1-173)||(18984493-18984665)
chr1 (1-171)||(5539817-5539987)
chr1 (1-170)||(17433589-17433758)
chr1 (1-173)||(39154394-39154566)
chr1 (9-172)||(29307324-29307487)
chr1 (1-179)||(15173468-15173645)
chr1 (1-174)||(50970276-50970449)
chr1 (1-172)||(29869993-29870164)
chr1 (1-171)||(8678542-8678712)
chr1 (1-175)||(21856039-21856213)
chr1 (1-174)||(15646190-15646363)
chr1 (1-164)||(33143925-33144088)
chr1 (12-171)||(4636356-4636515)
chr1 (1-172)||(26859059-26859230)
chr1 (9-175)||(9019345-9019511)
chr1 (9-169)||(15173099-15173258)
chr1 (9-173)||(50970661-50970824)
chr1 (9-174)||(18984117-18984281)
chr1 (9-170)||(33144302-33144462)
chr1 (9-173)||(5540201-5540364)
chr1 (9-173)||(15646578-15646741)
chr1 (2-171)||(5962579-5962748)
chr1 (9-172)||(8678925-8679086)
chr1 (1-172)||(17112282-17112452)
chr1 (9-172)||(29306953-29307115)
chr1 (9-169)||(5962961-5963120)
chr1 (9-173)||(29869619-29869782)
chr1 (9-174)||(26859443-26859606)
chr1 (22-175)||(9018970-9019122)
chr1 (9-172)||(21856426-21856588)
chr1 (9-172)||(17433216-17433378)
chr1 (46-173)||(52268289-52268416)
chr1 (9-170)||(39154021-39154181)
chr1 (56-170)||(52269177-52269291)
chr1 (86-175)||(2733416-2733505)
chr1 (97-170)||(47826966-47827039)
chr1 (72-164)||(47827033-47827125)
chr1 (9-175)||(44802555-44802720)
chr1 (9-178)||(39485059-39485226)
chr1 (9-177)||(17088524-17088690)
chr1 (11-177)||(9992149-9992315)
chr1 (22-177)||(45048533-45048686)
chr1 (22-172)||(9833549-9833698)
chr1 (9-79)||(17088243-17088312)
chr1 (9-169)||(45048158-45048316)
chr1 (9-112)||(4636033-4636134)
chr1 (91-172)||(50419725-50419806)
chr1 (13-176)||(29021252-29021415)
chr1 (91-173)||(29438929-29439011)
chr1 (11-169)||(17641750-17641912)
chr1 (15-84)||(44291701-44291769)
chr1 (11-170)||(50926232-50926392)
chr1 (11-170)||(34555766-34555926)
chr1 (11-174)||(50926627-50926789)
chr1 (11-170)||(10278550-10278709)
chr1 (11-173)||(30786770-30786932)
chr1 (14-171)||(23526659-23526815)
chr1 (99-173)||(39843497-39843571)
chr1 (11-170)||(44291303-44291462)
chr1 (11-173)||(52335896-52336057)
chr1 (12-172)||(9992542-9992701)
chr1 (11-79)||(8229732-8229800)
chr1 (98-174)||(52233736-52233812)
[»] scaffold0951 (2 HSPs)
scaffold0951 (1-175)||(2041-2215)
scaffold0951 (9-174)||(1665-1829)
[»] scaffold0417 (2 HSPs)
scaffold0417 (1-172)||(10997-11168)
scaffold0417 (8-153)||(10640-10784)
[»] scaffold1223 (2 HSPs)
scaffold1223 (9-172)||(1123-1286)
scaffold1223 (9-170)||(755-914)
[»] scaffold0295 (2 HSPs)
scaffold0295 (9-178)||(4787-4955)
scaffold0295 (1-170)||(5169-5334)
[»] scaffold0007 (6 HSPs)
scaffold0007 (1-169)||(64679-64847)
scaffold0007 (9-173)||(64301-64464)
scaffold0007 (9-170)||(205752-205911)
scaffold0007 (9-84)||(205038-205112)
scaffold0007 (9-84)||(205468-205541)
scaffold0007 (75-173)||(210786-210884)
[»] scaffold0019 (1 HSPs)
scaffold0019 (9-175)||(134056-134221)
[»] scaffold0157 (2 HSPs)
scaffold0157 (1-155)||(16870-17024)
scaffold0157 (9-104)||(16564-16658)
[»] scaffold0273 (2 HSPs)
scaffold0273 (9-174)||(4590-4754)
scaffold0273 (1-133)||(4242-4374)
[»] scaffold0027 (2 HSPs)
scaffold0027 (9-169)||(42172-42332)
scaffold0027 (9-182)||(42542-42713)
[»] scaffold0432 (2 HSPs)
scaffold0432 (2-169)||(9935-10100)
scaffold0432 (55-169)||(10300-10414)
[»] scaffold0176 (2 HSPs)
scaffold0176 (75-172)||(19069-19166)
scaffold0176 (9-173)||(18834-18996)
[»] scaffold1585 (1 HSPs)
scaffold1585 (47-171)||(568-692)
[»] scaffold0113 (1 HSPs)
scaffold0113 (58-173)||(28674-28789)
[»] scaffold0057 (2 HSPs)
scaffold0057 (46-169)||(61877-62000)
scaffold0057 (98-174)||(61026-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (56-168)||(454-565)
[»] scaffold0076 (1 HSPs)
scaffold0076 (69-169)||(8451-8551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (46-123)||(7707-7784)
[»] scaffold1339 (1 HSPs)
scaffold1339 (147-182)||(30-65)
[»] scaffold0830 (1 HSPs)
scaffold0830 (147-182)||(5352-5387)


Alignment Details
Target: chr4 (Bit Score: 156; Significance: 5e-83; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 46193576 - 46193405
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46193576 ctaaaaccgtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccttttt 46193477  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  46193476 gttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 46193405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 22434350 - 22434179
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  22434350 ctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgtttt 22434251  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  22434250 gttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcc 22434179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 2118464 - 2118295
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2118464 ctaaaaccgcctaaaactgcaatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggactatttt 2118365  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    ||| | ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  2118364 gttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 11153317 - 11153145
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11153317 ctaaaaccgcctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 11153218  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
     |||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  11153217 attctattttaaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaagcct 11153145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 45082798 - 45082969
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45082798 ctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 45082897  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||| ||||||||||||| ||| | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  45082898 gttctgttttaaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 45082969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 23494817 - 23494991
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||| |||||||||| | |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  23494817 ctaaaaccgcctaaaattgccatttctttacgtttctggagtttgagaataggatgtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 23494916  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23494917 gttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 23494991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 15523406 - 15523233
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    |||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||    
T  15523406 ctaaaaccgcataaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaataataattgaaggaccgtttt 15523307  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15523306 gttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 15523233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 51021170 - 51021342
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||    
T  51021170 ctaaaaccgcctaaaattgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattaaaggaccgtttt 51021268  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  51021269 gttgtgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 51021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 54995240 - 54995067
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  54995240 ctaaaaccgcctaaaactgtcatttctctacatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 54995141  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  54995140 gttctgttttaaaagggtaggactagtttcgtgagtaggccaatacacgaggaccaaaagtgtaattaaaccta 54995067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 25938045 - 25938217
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    |||||||||  |||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||    
T  25938045 ctaaaaccgcataaaactgccatttctttgtgtttctggagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgtttt 25938144  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25938145 gttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcct 25938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 25447418 - 25447247
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||| | |||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25447418 ctaaaactgcctaaaattgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 25447319  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||| ||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||    
T  25447318 gttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25447247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 20470885 - 20471059
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  20470885 ctaaaaccgcctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgtttt 20470984  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| ||||||||||| | ||| | |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20470985 gttctgttttaaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 20471059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 4219933 - 4220107
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||||||  |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4219933 ctaaaaccgcctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccatttt 4220032  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| ||||||||| ||||||  | ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4220033 gttctgttttaaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaa 4220107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 18751770 - 18751602
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  18751770 ctaaaaccgcctaaaactgccatttttctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgatatttgaaggaccgtttt 18751671  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||| ||||||||||||| ||| | |||  ||||||||||||||||||||||||||||||||||||||    
T  18751670 gttctgttttaaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaattaa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 12234703 - 12234874
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||| | ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12234703 ctaaaactgcctaaaactgtcatttctctgcatttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 12234802  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||| ||||||||||||| ||  | ||||||||||||||||||||||||||||||||||| ||||||||||    
T  12234803 gttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 12234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 48526555 - 48526723
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  48526555 ctaaaaccgcctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaagtgataattgaaggaccgtttt 48526654  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||| ||||||||||||| ||| | |||||||||||| |||||||||||||||||||||| |||||||    
T  48526655 gttctgttttaaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaa 48526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 46193788 - 46193948
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| || |||||| ||||| |||||  | ||||| || ||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||    
T  46193788 gtctaaaactgtcaattctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggaccgttttgttctgtt 46193886  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  46193887 ttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 46 - 174
Target Start/End: Original strand, 33109883 - 33110011
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||| ||||||||||| |||||||||    
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 33109982  T
Q  146 cacgaggaccaaaagtgtaattaagccta 174  Q
    || ||||||||||||||||||||||||||    
T  33109983 catgaggaccaaaagtgtaattaagccta 33110011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 12503607 - 12503453
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    |||||| || |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12503607 ctaaaatcgcctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaatttt 12503508  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggacc 155  Q
    ||||| |||||||| ||| |||  | ||||||||||| | |||||||||||||||    
T  12503507 gttctgttttaaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 12503453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 23494605 - 23494445
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||| | |||||  | ||||| || ||||||||||||||||||| |||||||||||||||||||||  |||||||| ||    
T  23494605 gtctaaaactgtcatttctctgcgtgtttggagaat-aaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggaccgctttgttctgtt 23494507  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  23494506 ttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 25447619 - 25447783
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||||||||||||| |||||  | ||||| |  |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||    
T  25447619 gtctaaaactgtaatttctctgcgtttttggagaat-aaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 25447717  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||    
T  25447718 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagccta 25447783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 33109846 - 33109686
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  33109846 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 33109748  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    ||||||| ||||||| | ||||||||||| ||||||||||||||||||||| ||||||||||    
T  33109747 ttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 15523617 - 15523780
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||| ||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| | ||    
T  15523617 gtctaaaactgtcatttctttgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttttgtt 15523715  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||||||||||| | |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  15523716 ttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagcct 15523780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 11153530 - 11153692
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||||||||||||| |||||  | ||||| |  ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||    
T  11153530 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaacgttttgttctgtt 11153628  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  11153629 ttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11153692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 12 - 170
Target Start/End: Complemental strand, 4219716 - 4219559
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    |||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  4219716 taaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttttatttta 4219618  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    ||| |||||||| | ||||||||||||||||||||||||||||||||| ||||||||||    
T  4219617 aaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 12 - 178
Target Start/End: Complemental strand, 12234488 - 12234323
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    ||||||||  |||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||    
T  12234488 taaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 12234390  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatta 178  Q
    |||||||||||| | |||||||| || ||||||||| ||||||||||||||||||||||||||||||    
T  12234389 aaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaagcctaatta 12234323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 25937832 - 25937667
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |  ||||| |||||||||||||||||||||||||||||||| ||||||||| ||    
T  25937832 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 25937734  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||||||||||||| | |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  25937733 ttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaagcctaa 25937667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 8 - 173
Target Start/End: Original strand, 22170319 - 22170482
Alignment:
Q  8 cgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctat 107  Q
    |||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||| | |    
T  22170319 cgtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttgt 22170417  T
Q  108 tttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||| |||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||    
T  22170418 tttaaaaaggcaggac-aatttcgtcagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 22170482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 38962202 - 38962362
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  38962202 gtctaaaactgtcatttctctgcgtttttgaagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 38962300  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    |||||||||| |||| | |||||||| ||| |||||||||||||||||||| ||||||||||    
T  38962301 ttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaag 38962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 22434561 - 22434724
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||    
T  22434561 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 22434658  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    | |||| |||||||| | ||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  22434659 t-aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaaacctaa 22434724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 48526356 - 48526195
Alignment:
Q  10 tctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    |||||||||| ||||||||||| ||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  48526356 tctaaaactgtcatttctctgcatttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttt 48526259  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||||||||||  | | |||| |||||||| ||||||||||| |||||||||||||||||||||    
T  48526258 taaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaagcct 48526195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 18763951 - 18764068
Alignment:
Q  58 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaa 157  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||| || ||| | |||||||||||||||||||||||||||||||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaa 18764050  T
Q  158 aagtgtaattaagcctaa 175  Q
    ||||||||||||| ||||    
T  18764051 aagtgtaattaagtctaa 18764068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 51020959 - 51020794
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||| ||||| || ||  | ||||| || ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||    
T  51020959 gtctaaaactgtcatttctctacgtttttgaagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtt 51020861  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||||||||||||| | ||| |||| |  ||||||||| ||||| |||||||||||||||||||||    
T  51020860 ttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaagcctaa 51020794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 54995498 - 54995614
Alignment:
Q  57 taggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggacca 156  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| ||  | ||||||||||||||||||||||||||||||    
T  54995498 taggacgaaaaatgcaacaaaa-tgatacttgaaggaccgttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggacca 54995596  T
Q  157 aaagtgtaattaagccta 174  Q
    ||||||||||||| ||||    
T  54995597 aaagtgtaattaaaccta 54995614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 176
Target Start/End: Complemental strand, 45082592 - 45082428
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||| || |||||||||| |||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45082592 gtctaaaattgtcatttctctgtgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatt 45082495  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    |||||||||||  ||  | ||||||||||| ||||||||||| ||||||||| |||||||| ||||||    
T  45082494 ttaaaagggcaaaac-cagttcgtgagtagaccaaaacacgatgaccaaaagcgtaattaaacctaat 45082428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 44 - 173
Target Start/End: Original strand, 10258304 - 10258433
Alignment:
Q  44 tgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaa 143  Q
    |||||||||| |||| ||| |||| ||||||||||||||||||||||  || |||||  ||| ||||||||||||||||| |||||| |||||||||||     
T  10258304 tgaaaatagggggtaagactaaaactgcaacaaaaatgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccac 10258403  T
Q  144 aacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||||||||||||||||||||||||||    
T  10258404 aacacgaggaccaaaagtgtaattaagcct 10258433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 20958288 - 20958403
Alignment:
Q  55 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggac 154  Q
    |||||||| |||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  20958288 ggtaggac-aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccattttcgtgagtaggccaaaatacgaggac 20958386  T
Q  155 caaaagtgtaattaagc 171  Q
     ||||||||||||||||    
T  20958387 taaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 2118679 - 2118837
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||   |||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||| | ||    
T  2118679 gtctaaaactattatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttatgtt 2118776  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||||||  ||||| | |||| |||| |||||||||||||| ||||||||||||||||||    
T  2118777 ttaaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaa 2118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 48293708 - 48293592
Alignment:
Q  58 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaa 157  Q
    |||| ||||||||||||||||||||||||||||| || |||||||| | |||||||  | |||||  ||||||||||||| |||||||||||||||||||    
T  48293708 aggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttcgtgagtaagccaaaacacgaggaccaa 48293609  T
Q  158 aagtgtaattaagccta 174  Q
    |||||||||||||||||    
T  48293608 aagtgtaattaagccta 48293592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 43243708 - 43243807
Alignment:
Q  55 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggac 154  Q
    |||||||| |||||||||||||||||||||||||||| || |||||||||| ||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  43243708 ggtaggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgaggac 43243807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 35363028 - 35363146
Alignment:
Q  55 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt-aaaagggcaggactaatttcgtgagtaggccaaaacacgagga 153  Q
    ||||| |||||||||||||||||||||||||||||| |||| ||||||| | |||| ||||| |||| || | |||||||||||||||||||||||||||    
T  35363028 ggtagaacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgagga 35363127  T
Q  154 ccaaaagtgtaattaagcc 172  Q
     ||||||||||||||||||    
T  35363128 tcaaaagtgtaattaagcc 35363146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 48713777 - 48713893
Alignment:
Q  58 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaa 157  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| ||| | |||| ||||||||| |||||||||| |  ||    
T  48713777 aggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccattttcatgagtaggctaaaacacgagaattaa 48713876  T
Q  158 aagtgtaattaagccta 174  Q
    |||||||||||| ||||    
T  48713877 aagtgtaattaaaccta 48713893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 169
Target Start/End: Complemental strand, 16691062 - 16690939
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||  |||||||| | |||||||  |||||||| | ||||||||||||  |||||    
T  16691062 aaaatcgggggtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgagtagatcaaaa 16690963  T
Q  146 cacgaggaccaaaagtgtaattaa 169  Q
    ||| |||||||||| |||||||||    
T  16690962 cacaaggaccaaaaatgtaattaa 16690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 44892576 - 44892699
Alignment:
Q  55 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggac 154  Q
    |||||||||||||||||||||||||  ||||||||| |||  ||||||||| |||||||| ||||| || | ||||||||||||| ||||||||||||||    
T  44892576 ggtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttcgtgagtaggtcaaaacacgaggac 44892675  T
Q  155 caaaagtgtaattaagcctaatta 178  Q
    ||||| | ||||||||| ||||||    
T  44892676 caaaaatataattaagcttaatta 44892699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 174
Target Start/End: Complemental strand, 48708401 - 48708293
Alignment:
Q  66 aaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaa 165  Q
    |||||||||||||||||||||||||||||  ||||||| | ||||||||||||||||  | |||||||  |||||||||||||  |||||||||||||||    
T  48708401 aaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggttaggccaaaacacatggaccaaaagtgtaa 48708302  T
Q  166 ttaagccta 174  Q
    |||||||||    
T  48708301 ttaagccta 48708293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 48294961 - 48295088
Alignment:
Q  46 aaaataggaggtaggacg-aaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaa 144  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||| ||| |||||||| | |||||||  |||| ||| ||||||||||||||  ||||    
T  48294961 aaaatggggggtaggacggaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaatttcgtgagtagatcaaa 48295060  T
Q  145 acacgaggaccaaaagtgtaattaagcc 172  Q
    |||||| |||||||| ||||||||||||    
T  48295061 acacgatgaccaaaaatgtaattaagcc 48295088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 154
Target Start/End: Original strand, 43281210 - 43281317
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || |||||||||||||||||||||||||| |||||||||| ||  ||||||||| |||||||| |||| ||| | |||||||||||||||||||    
T  43281210 aaaatggggggtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtgagtaggccaaaa 43281308  T
Q  146 cacgaggac 154  Q
    |||||||||    
T  43281309 cacgaggac 43281317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 16691491 - 16691616
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| ||||||| ||||||||||||||||||||| |||||| |||||| |||||||| |  ||||||  |||||||| | ||||||||||||| |||||    
T  16691491 aaaatgggaggtatgacgaaaaatgcaacaaaaataataattaaaggacaattttgttat-gtttaaagaggcaggaccattttcgtgagtaggtcaaaa 16691589  T
Q  146 cacgaggaccaaaagtgtaattaagcc 172  Q
    |||  ||| ||||||||||||||||||    
T  16691590 cacagggatcaaaagtgtaattaagcc 16691616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 20957301 - 20957196
Alignment:
Q  60 gacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaa 159  Q
    ||||||||||||||||||| ||||||||||||||| |||||||| | ||||||||| | | ||| | ||||||||||| |||||||| ||||||||||||    
T  20957301 gacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtgagtaagccaaaactcgaggaccaaaa 20957202  T
Q  160 gtgtaa 165  Q
     |||||    
T  20957201 atgtaa 20957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 44890643 - 44890518
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || |||| || |||||||||||||||||  |||||| |||||   ||||||||| ||||||||||||| ||| | |||||||| |||| |||||    
T  44890643 aaaatggggggtatgatgaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttcgtgaataggtcaaaa 44890544  T
Q  146 cacgaggaccaaaagtgtaattaagc 171  Q
    ||| |||||||||| |||||||||||    
T  44890543 cacaaggaccaaaattgtaattaagc 44890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 17504135 - 17503973
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| |||| ||||| ||| |||||| ||  |||||  || ||||| |||    
T  17504135 gtctaaaactgtcatttctctacgtttctggag-ttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtt-taggacggttatgttccatt 17504038  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    | |||  |||||||| | |||||||||  || |||||  |||||||||| ||| |||||||||||    
T  17504037 tgaaagaggcaggaccattttcgtgagatggtcaaaatgcgaggaccaacagtataattaagcct 17503973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 12503819 - 12503913
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 104  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  12503819 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttc 12503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 16318251 - 16318322
Alignment:
Q  102 ttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||| ||||||||||||||||  | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 16318322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 30597940 - 30598072
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    |||||||| | |||||| |||| |||||||||||| |||||| | |||| ||||||||| |||| |||  | ||| || |||| ||||||| || |||||    
T  30597940 aaaataggggttaggaccaaaagtgcaacaaaaat-ataatttagggacgattttgttcgatttaaaagagacagaaccaattccgtgagttggtcaaaa 30598038  T
Q  146 cacgaggaccaaaagtgtaattaagcctaattat 179  Q
    ||||||||||||||||||||| ||||| ||||||    
T  30598039 cacgaggaccaaaagtgtaatcaagccaaattat 30598072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 40160467 - 40160633
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||| | ||||||||||  ||||||| ||||||||||| |||||||||||||||| ||| |||| ||||| ||| |||||| ||  |||||  ||||    
T  40160467 ctaaaactgcctaaaactgcattttctctacgtttctggag-ttgaaaataggaggtaagactaaaactgcaaaaaacatgatagtt-taggacggtttt 40160564  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    |||| |||| |||  |||| ||||| |||||||||| || |||||  | |||||||||| |||||||||    
T  40160565 gttcaatttgaaagaggcatgactattttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 40160633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 43242396 - 43242328
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaa 114  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| |||| ||||||||| ||||||||    
T  43242396 aaaattggaggtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaa 43242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 55189636 - 55189528
Alignment:
Q  64 aaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgt 163  Q
    ||||||| | ||||||||||||||||| ||| ||||||||||||||||||||||||  || | |||  ||| |||| ||||||||||||| ||||| | |    
T  55189636 aaaaatgtagcaaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatat 55189537  T
Q  164 aattaagcc 172  Q
    |||||||||    
T  55189536 aattaagcc 55189528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 179
Target Start/End: Complemental strand, 34789542 - 34789375
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    |||||| || ||||| | ||||||||||||||||||||   |||| |||||| |||| ||||| ||| || ||| || |||||| ||||||||| ||||     
T  34789542 ctaaaattgtcatttatgtgcgtttctggagtttgaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 34789444  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaattat 179  Q
    |||| |  ||||| | |||||||||| || |||||    ||||||||||||||||||||||| ||||||    
T  34789443 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaaattat 34789375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 12593409 - 12593572
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| |||| || ||||||||||||||| ||||||||| || |||||| |||| ||||| ||| || ||| || |  ||| ||||||||| ||||    
T  12593409 ctaaaactgtcattcctgtgcgtttctggagtt-gaaaatagggagataggactaaaactgcaaaaaatat-atagtttacagacgattttgttcgattt 12593506  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
     |||  || | ||| |||||||||||| || |||||  | ||||||||||||||||||||||||||    
T  12593507 aaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctaa 12593572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 176
Target Start/End: Original strand, 34789768 - 34789933
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||| ||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || | |||| ||||||||| ||||     
T  34789768 ctaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggacaattttgttcgattta 34789867  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    |||  || ||||| |||||||||||| || |||||  | ||||||||||||||||||||| |||||    
T  34789868 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagtctaat 34789933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 46737041 - 46737203
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggagg-taggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||||| ||||||||||||||| || | ||||| | || ||| |||| ||||| ||| || ||| || | |||| ||||||||| ||||    
T  46737041 ctaaaactgtcatttctgtgcgtttctggagttggaga-taggaagatatgactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattt 46737138  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
     |||  || ||||| |||||||||||| || |||||  | |||||||||||||||||||||||||    
T  46737139 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 46737203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 12593184 - 12593023
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| |||| |||||  |||| ||||| ||| || ||| || |||||| ||||||||| ||||    
T  12593184 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattt 12593087  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
     |||| || | ||| | |||||||||| || ||||     ||||||||||||||||||||||||    
T  12593086 aaaaaaggtatgaccattttcgtgagttggtcaaactggtaggaccaaaagtgtaattaagcct 12593023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 19529030 - 19528867
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| |||||||| |||||| ||||   |||| |||||| |||| ||||| ||||   ||| || | |||| ||||| ||| ||||     
T  19529030 ctaaaactgtcatttctgtgcgtttccggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggacgattttattcgattta 19528931  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||  || ||||| |||||||||| | || |||||  | |||||||||||||||||||||||||    
T  19528930 aaagaggtaggaccaatttcgtgaattggtcaaaatgcaaggaccaaaagtgtaattaagccta 19528867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 24336149 - 24336307
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||| ||||||||||| | ||||||||||| ||||||||| | |||||||| ||||  |||| ||| ||||||||| | | ||  |||||||| ||||     
T  24336149 ctaaagctgccatttctatacgtttctggag-ttgaaaatatggggtaggactaaaagagcaaaaaacatgataatttaggaacggttttgttcgatttg 24336247  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    |||  |||||||| | |||||||||   | |||||  |||||| ||||||||||||||||    
T  24336248 aaagaggcaggaccattttcgtgagcttgtcaaaatgcgaggatcaaaagtgtaattaag 24336307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 34807277 - 34807114
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || | |||| ||||||||| ||||     
T  34807277 ctaaaactgtcatttatgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaaacatatactttagggacgattttgttcgattta 34807178  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||  || | ||| |||||||||||| |  |||||  | |||||||||||||||||||||||||    
T  34807177 aaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagccta 34807114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 14439988 - 14439831
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || | |||| ||||||||  ||||     
T  14439988 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgtttaattta 14439890  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    |||| || | ||| |||||||||||| || |||||  | |||||||||| |||||||||    
T  14439889 aaaaaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 14439831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 177
Target Start/End: Original strand, 28465467 - 28465632
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    |||||||||| |||| | ||||||| ||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| ||||||||| ||||     
T  28465467 ctaaaactgctatttatgtgcgtttatggagttggaaatagggagataggactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 28465565  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatt 177  Q
    |||| |  ||||| | |||||||||| || |||||    ||||||||||||||||||||||| ||||    
T  28465566 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaaatt 28465632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 35193469 - 35193345
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| |||||||||||||||||| || ||||||||||||| |||||| |||| ||||| ||| || ||| || | |||| ||||||||| |||    
T  35193469 gtctaaaactgtcatttctctgcgtttctgaag-ttgaaaataggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgatt 35193372  T
Q  109 ttaaaagggcaggactaatttcgtgag 135  Q
    | |||  || ||||| | |||||||||    
T  35193371 tgaaagaggtaggaccattttcgtgag 35193345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 55677343 - 55677505
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||| ||||||| ||||   |||| |||||| |||| || || ||||   ||| || |  ||| ||||||||| ||||     
T  55677343 ctaaaactgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaattgtaaaaaaacatatagtttagagacgattttgttcgattta 55677442  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||  || ||||| |||||||||||| || ||||| || ||||||||||||||||||||||||    
T  55677443 aaagaggtaggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaagcct 55677505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 17504343 - 17504407
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 73  Q
    ||||||||||| ||||||||||||||||| |||||  |||||||||||||| || |||| |||||    
T  17504343 gtctaaaactgtcatttctctgcgtttctagagttgaaaaataggaggtagtactaaaattgcaa 17504407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 176
Target Start/End: Original strand, 35193691 - 35193852
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||| ||| ||||   ||| ||| |||||| ||  |||||  |||||||  |||| |    
T  35193691 taaaactgccatt-ctctgcgtttctggag-ttgaaaataggaggtatgactaaaacatcaaaaaacatgatagtt-taggacggttttgttagatttga 35193787  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    ||  |||||||| | |||||||||     |||||  | |||||||||||||||||||||||||||    
T  35193788 aagaggcaggaccattttcgtgagcttatcaaaatgcaaggaccaaaagtgtaattaagcctaat 35193852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 44220805 - 44220861
Alignment:
Q  55 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    ||||| |||||||||| |||||||||||||| |||||||| |||||||||| |||||    
T  44220805 ggtagaacgaaaaatgaaacaaaaatgataaatgaaggacaattttgttctgtttta 44220861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 229545 - 229702
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    |||||| || || |||| ||||||||||||||| ||||||| ||||||||||  |||| ||||| ||| |||||| || |||||| ||||||||  ||||    
T  229545 ctaaaattgtcacttctgtgcgtttctggagtt-gaaaataaggaggtaggattaaaactgcaa-aaacatgatagtttaaggacgattttgtttgattt 229642  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
     |||  |||| ||| | |||||||||  || |||||  ||| ||||||||||||||||||    
T  229643 gaaagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 229702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 21034622 - 21034784
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | || |||||||||||| ||||   |||| ||| || |||| ||||| |||||  ||| || | |||| ||||||||| ||||     
T  21034622 ctaaaactgtcatttttgtgtgtttctggagttggaaatagggagatagaactaaaactgcaaaaaaaaatatagttcagggacgattttgttcgattta 21034721  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||  |  ||||| |||||||||||| || |||||  | |||||||||| |||||||||||||    
T  21034722 aaagagataggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaagcct 21034784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 33689912 - 33689826
Alignment:
Q  89 aaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||||| ||||||||| |||| |||  || ||||| ||||| |||||| || |||||  | ||||||||||||||||||||||||||    
T  33689912 aaggacgattttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctaa 33689826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 170
Target Start/End: Complemental strand, 54440729 - 54440573
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||||| ||| |||||| |||| ||||||||| || |||||| |||| ||||| ||| ||   | || | |||| ||||||||| ||||    
T  54440729 ctaaaactgtcatttctgtgcatttctgaagtt-gaaaatagggagataggactaaaactgcaaaaaacat---agtttagggacgattttgttcgattt 54440634  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
     |||  || ||||| |||||||||||| || |||||  | |||||||||||||||||||||    
T  54440633 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 54440573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 229321 - 229159
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggag-gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| || || | ||||||| ||||||| ||||||| | | |||| || |||| ||||| ||| |||||| || |||||| ||||||||| ||||    
T  229321 ctaaaactgtcacttttgtgcgtttatggagtt-gaaaataagggagtagaactaaaactgcaa-aaacatgatagtttaaggacgattttgttcaattt 229224  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
     |||  |||| ||| | ||||| |||  || ||||| ||||||||||||||||||||||| ||||    
T  229223 gaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaagtgtaattaaaccta 229159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 45838628 - 45838544
Alignment:
Q  91 ggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||| ||||||||| |||| |||  || ||||| |||| ||||||| || ||||| || |||||||||||||||| |||||||||    
T  45838628 ggacgattttgttcgatttaaaagaggtaggaccaattacgtgagttggtcaaaatacaaggaccaaaagtgtaaataagcctaa 45838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 44219428 - 44219377
Alignment:
Q  119 aggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    ||||| |||||||||||| ||  |||| ||||||||||||||||||||||||    
T  44219428 aggaccaatttcgtgagttggttaaaatacgaggaccaaaagtgtaattaag 44219377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 41608908 - 41608966
Alignment:
Q  119 aggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatt 177  Q
    ||||| |||||||||||| || |||||    ||||||||||||||||||||||||||||    
T  41608908 aggaccaatttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcctaatt 41608966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 28465241 - 28465078
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||| | ||||||||||||| ||||||||| |||| || ||| |||| ||||| ||| || ||| || |||||| ||||||||| ||||    
T  28465241 ctaaaactgtcatttatgtgcgtttctggag-ttgaaaatagggagatatgactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 28465144  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
     |||  || ||||  |||||||| ||| || |||||    ||||| ||||||||||||||| ||||    
T  28465143 aaaagaggtaggatcaatttcgtaagttggtcaaaatggaaggactaaaagtgtaattaagtctaa 28465078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 169
Target Start/End: Original strand, 55191208 - 55191318
Alignment:
Q  61 acgaaaaatgcaacaaaaatga---taattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaa 157  Q
    ||||||| ||||||||||||||   ||||| || ||| ||||| ||||||||||||| |||| ||| | |||| |||||| | ||||||||||  |||||    
T  55191208 acgaaaagtgcaacaaaaatgatagtaattaaaagacaattttattctattttaaaa-ggcatgaccattttcatgagtatgtcaaaacacgaaaaccaa 55191306  T
Q  158 aagtgtaattaa 169  Q
    || | |||||||    
T  55191307 aattataattaa 55191318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 172
Target Start/End: Original strand, 56077710 - 56077870
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||||| ||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| ||||||||| ||||     
T  56077710 ctaaaactgtcatttttgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 56077808  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||| |  | ||| | |||||||||| || |||||    |||||||||| ||||||||||||    
T  56077809 aaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaagcc 56077870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 24851851 - 24852010
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggagg-taggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||  ||||||| ||||||||||||||| |||| ||| | | |||||| |||| ||||| ||||   ||| || | |||| ||||||||| ||||    
T  24851851 ctaaaactttcatttctgtgcgtttctggagttggaaa-tagaaagataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 24851949  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
     |||  || ||||  |||||||||||| || |||||  | |||||||||||| ||||||||    
T  24851950 aaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtataattaag 24852010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 40160255 - 40160093
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||   |||| | ||||| |||||||||||||||||| |||| ||||| ||| || ||| || | ||||  |||||||| |||    
T  40160255 gtctaaaactgtcatttctccatgtttatagagtt-gaaaataggaggtaggactaaaactgcaaaaaacat-atagtttagggacggttttgttcgatt 40160158  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    | |||  |||| ||||| |||||||||  ||  ||||  || ||| ||||| |||||||||||||    
T  40160157 taaaagaggcatgactattttcgtgagctggttaaaatgcggggatcaaaaatgtaattaagcct 40160093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 8e-79; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 13225013 - 13225185
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13225013 ctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 13225112  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||| ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  13225113 gttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 13225185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 19176461 - 19176286
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  19176461 ctaaaaccgcctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 19176362  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176361 gttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 19176286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 11656841 - 11657003
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11656841 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 11656940  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||||| | |||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  11656941 aaaaggccgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 11657003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 12572225 - 12572393
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12572225 ctaaaaccgcctaaaactgcaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 12572324  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||| ||||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  12572325 gttctgttttaaaagagcatgactagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 44831418 - 44831246
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  44831418 ctaaaaccgcctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgtttt 44831319  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44831318 gttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcct 44831246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 41681508 - 41681679
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  41681508 ctaaaaccgcctaaaactaccatttctctgcgtttctggagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 41681607  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||| ||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||||||||||    
T  41681608 gttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgaggaccaaaagtgtaattaagcc 41681679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 9929080 - 9928912
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9929080 ctaaaaccgcctaaaactgacatttctctgcgtttctggagtttgaaaaaaggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 9928981  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||| ||||||||||||||||| | ||||||||||||  |||||||||||||||||||||||||||||    
T  9928980 gttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 34540942 - 34541096
Alignment:
Q  21 catttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcag 120  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  34540942 catttctctgcgtttcttaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagagcag 34541041  T
Q  121 gactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34541042 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 34541096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 33328515 - 33328683
Alignment:
Q  2 taaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttg 101  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  33328515 taaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 33328614  T
Q  102 ttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    || | ||||||||| ||| ||||| |||||||||||||| |||||||||||||||||||| ||||||||    
T  33328615 ttatgttttaaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 31133594 - 31133764
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    |||||||||  |||||| | ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||    
T  31133594 ctaaaaccgcataaaaccgtcatttctctgcatttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaataataattgaaggaccgtttt 31133693  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    ||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||    
T  31133694 gttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 31133764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 33743092 - 33742919
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||| | ||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||  |||    
T  33743092 ctaaaactgcctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcatcaaaaatgataattgaaagacc-gttt 33742994  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| ||||||||||||| ||| | ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33742993 gttctgttttaaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctaa 33742919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 19176673 - 19176838
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||| ||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  19176673 gtctaaaactgtcatttgtctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 19176771  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||    
T  19176772 ttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 19176838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 12 - 174
Target Start/End: Complemental strand, 41681292 - 41681132
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    |||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  41681292 taaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttta 41681195  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41681194 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 41681132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 9930040 - 9930203
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||  |||||||||||| || |||||  | ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9930040 gtctaaaactatcatttctctgcgcttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccattttgttctatt 9930138  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||    
T  9930139 ttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 9930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 11656618 - 11656452
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttct-ggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctat 107  Q
    ||||||||||||||||||||||||||| | ||||  | ||||| || ||||||||||||||||||||||||||| ||||||||||||| ||||||||  |    
T  11656618 gtctaaaactgccatttctctgcgttttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgttcagt 11656520  T
Q  108 tttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11656519 tttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 11656452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 4629948 - 4629795
Alignment:
Q  21 catttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcag 120  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||    
T  4629948 catttctttgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagggcag 4629849  T
Q  121 gactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||| | |||||||| || ||||||||||||| |  ||||||| |||||||||||    
T  4629848 gaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaattaagccta 4629795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 12572026 - 12571860
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggagg-taggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctat 107  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || || |||||||||||||||||||||||||||||||||| |||| ||||||||| |    
T  12572026 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggttaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgt 12571928  T
Q  108 tttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||||||||| || || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12571927 tttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 12571860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 31133382 - 31133218
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||| |||||||||  ||||||| | ||    
T  31133382 gtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggactgttttgttttgtt 31133284  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||||||||| |||| | ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31133283 ttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagccta 31133218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 44831628 - 44831800
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| |||||||||| |||| |||||  | ||||| || |||||||| |||||||||||||||||||||||||||  ||| ||||||||| ||    
T  44831628 gtctaaaactgtcatttctctgtgtttttggagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaataaccgttttgttctgtt 44831726  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaattataaa 182  Q
    ||||||| ||||||| | ||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||    
T  44831727 ttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctaattttaaa 44831800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 33328320 - 33328161
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||| ||||||| |||||  | ||||| |  |||||||||||||||||||||||||||||| |||||||||| ||||||||| ||    
T  33328320 gtctaaaactgtcatttctttgcgtttttggagaat-aaaatcgagggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtt 33328222  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||||||||| ||  | |||||||||||||||||||||||||||||||||||||||||||    
T  33328221 ttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 13224802 - 13224645
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||||||   ||||||||| ||    
T  13224802 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaattcaacaaaaatgataattgaaggattgttttgttctgtt 13224704  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaatta 168  Q
    ||||||||||| ||| | |||||||||||||||||||||||| |||||||||||||||||    
T  13224703 ttaaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 9178019 - 9178180
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||| || ||||||||||||||| | |||  | ||||| || |||| || |||||||||||||||||||||| |||||||||| ||||||||| ||    
T  9178019 gtctaaaattgtcatttctctgcgttttttgagaat-aaaatggg-ggtaagatgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtt 9178116  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||| |||||| ||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  9178117 ttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 9178180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 11336959 - 11337069
Alignment:
Q  64 aaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgt 163  Q
    ||||||||||||||||||||||||||| |||| |||| |||| |||||||||||| |||| ||||||||||||| |||||||||||| ||||||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgt 11337058  T
Q  164 aattaagccta 174  Q
    |||||||||||    
T  11337059 aattaagccta 11337069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 4630175 - 4630328
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||| ||||||||| |||||  | ||||| || ||||||| ||||||||||||||      ||||||||||||| || | |||| ||    
T  4630175 gtctaaaactgtcatttttctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaa------taattgaaggaccgttgtattctgtt 4630267  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||||  ||||||| |||||||||||||| ||||||||||| || |||||||||||||||    
T  4630268 ttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 173
Target Start/End: Original strand, 8073985 - 8074097
Alignment:
Q  60 gacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaa 159  Q
    |||| |||||||||||||| ||||||||||||||  |||||||||| |||||||||| || ||  | |||||||| ||||||||||||||||||||||||    
T  8073985 gacgtaaaatgcaacaaaa-tgataattgaaggatgattttgttctgttttaaaaggacatgatcattttcgtgaataggccaaaacacgaggaccaaaa 8074083  T
Q  160 gtgtaattaagcct 173  Q
    || ||| |||||||    
T  8074084 gtataactaagcct 8074097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 10918252 - 10918123
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || |||| || |||||||||||||||||||||| ||||||||| |||||| ||| ||||||   |||| ||| ||||||||||||||  |||||    
T  10918252 aaaatggggggtatgatgaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtgagtagatcaaaa 10918153  T
Q  146 cacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||||||| |||| ||||||||| |||||    
T  10918152 cacgaggacaaaaaatgtaattaaacctaa 10918123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9177803 - 9177724
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaat 80  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  9177803 ctaaaaccgcctaaaactgtcatttctcttcgtttctggagtttgaaaatgggaggtgggatgaaaaatgcaacaaaaat 9177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 33743302 - 33743412
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||  ||| ||||||||| ||    
T  33743302 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgttttgttctgtt 33743400  T
Q  109 ttaaaagggcag 120  Q
    |||||| |||||    
T  33743401 ttaaaaaggcag 33743412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 28254812 - 28254971
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||  || ||| || | |||| ||||||||| ||||     
T  28254812 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaattat-atagtttagggacgattttgttcgattta 28254910  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    |||  || ||||| |||||||||||| || |||||  | ||||||||||||||||||||||    
T  28254911 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 28254971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 5730977 - 5730814
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||||| | |||||||||||||  |||||||| ||||||||| ||||  |||| ||| || ||| || |||||| ||||||||  ||||    
T  5730977 ctaaaactgtcatttctgtacgtttctggagtta-aaaatagggaggtaggactaaaacagcaaaaaacat-atagtttaaggacgattttgtttgattt 5730880  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
     |||| |  ||||||| |||||||||| || |||||    ||||||||||||||||||||||||||    
T  5730879 aaaaaagataggactattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcctaa 5730814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 176
Target Start/End: Original strand, 35427198 - 35427362
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||| ||||||| ||||   |||| | |||| |||| ||||| ||| || |||||| | |||| |||||||||  |||     
T  35427198 ctaaaactgtcatttctgtgcgtttatggagttggaaatagggagatgggactaaaactgcaaaaaatat-ataatttagggacgattttgttcggttta 35427296  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    |||  || || || | |||||||||| || |||||  |||||||||||||||||||||||||||||    
T  35427297 aaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcctaat 35427362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 93
Target Start/End: Complemental strand, 43958311 - 43958264
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga 93  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||    
T  43958311 aaaatagagggtaggacgaaaaatgcaacaaaaatgataattgaagga 43958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 15255934 - 15255848
Alignment:
Q  91 ggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatt 177  Q
    |||| ||||||||| |||| |||  || ||||| |||||||||||| || |||||  | ||||||||||||||||||||||||||||    
T  15255934 ggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctaatt 15255848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 175
Target Start/End: Complemental strand, 16578250 - 16578105
Alignment:
Q  29 tgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatt 128  Q
    ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || |||||| | |||| ||||||||| |||| |||  || ||||| ||||    
T  16578250 tgcgtttctggagttggaaatagggagataggaccaaaactgcaaaaaacat-ataatttagggacgattttgttcgatttaaaagaggtaggaccaatt 16578152  T
Q  129 tcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||||||| || |||||  | || ||||||| |||||||||||||||    
T  16578151 tcgtgagttggtcaaaatgcaagaaccaaaaatgtaattaagcctaa 16578105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 6115496 - 6115660
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||||| ||||||||| ||||| ||||||| |||| ||| || |||| | ||| ||||   ||| || | |||| ||||||||| ||||    
T  6115496 ctaaaactgtcatttctgtgcgtttcttgagtt-gaaaataaggagatagaactaaaactacaaaaaaacatatagtttagggacgattttgttcgattt 6115594  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
     |||  || ||||| ||||||| |||| || ||||| || |||||||||||| |||||||||||||    
T  6115595 aaaagaggtaggaccaatttcgcgagttggtcaaaatacaaggaccaaaagtataattaagcctaa 6115660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 18049750 - 18049590
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    |||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| ||||||||| |||| |    
T  18049750 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaa 18049651  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||| |  || || | |||||||||| || |||||    |||||||||||||||||| ||||    
T  18049650 aaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattgagcc 18049590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 174
Target Start/End: Complemental strand, 9177700 - 9177665
Alignment:
Q  139 gccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||||||||||||||||||||||||||||    
T  9177700 gccaaaacacgaggaccaaaagtgtaattaagccta 9177665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 178
Target Start/End: Complemental strand, 9796886 - 9796720
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||| ||||||| ||||   |||| || ||| |||| ||||| ||| || ||| || | |||  ||||||||| ||||     
T  9796886 ctaaaactgtcatttctgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaacat-atagtttatggatgattttgttcgattta 9796788  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatta 178  Q
    |||  || ||||| ||||| |||||| || |||||  | ||||||||||||||||||||||| |||||    
T  9796787 aaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccaaatta 9796720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 599692 - 599531
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||||||||||| ||||   |||| || ||| |||| ||||| ||| || |||||| | |||  ||||||||| ||||     
T  599692 ctaaaactgtcatttgtgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaacat-ataatttagggatgattttgttcgattta 599594  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||  || | ||| |||||||||||| || |||||  | |||||||||| |||||||||||||    
T  599593 aaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagcct 599531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 18428147 - 18428305
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||||||||||| ||||   |||| |||||  |||| ||||| ||||   ||| || |||||| ||||||||| ||||     
T  18428147 ctaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggagtaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattta 18428246  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    |||| |  ||||| | |||||||||| || |||||    ||||||||||||||||||||    
T  18428247 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 18428305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 18805324 - 18805267
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 67  Q
    ||||||||||| |||||||||| |||||||||| ||||| |||||||||||||| ||||    
T  18805324 gtctaaaactgtcatttctctgtgtttctggag-ttgaagataggaggtaggactaaaa 18805267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 10919691 - 10919732
Alignment:
Q  132 tgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||||||| ||||||||||||||||||||| |||||||||||    
T  10919691 tgagtaggtcaaaacacgaggaccaaaagtataattaagcct 10919732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 28877274 - 28877432
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||| || ||||| | | |||||||||||||  ||||||| ||||||||| ||||  |||| ||| |||||| || | |||| ||||||||| |||    
T  28877274 gtctaaaattgtcatttatatacgtttctggagtta-aaaatagaaggtaggactaaaacagcaaaaaacatgatagtt-agggacaattttgttcaatt 28877371  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    | |||  || |  || | |||||||||| || |||||  ||||||||||||||||||||||    
T  28877372 tgaaagaggtataaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 28877432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 41260647 - 41260816
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||| | ||||||||||||||| ||||||||| || |||||| |||| ||||| ||| || ||| || | |||| ||||||||| ||||    
T  41260647 ctaaaactgtcatttatgtgcgtttctggagtt-gaaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattt 41260744  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaattataa 181  Q
     |||  || | ||  |||||||||||| |  |||||  | | |||||||||| ||||||||||||| |||||    
T  41260745 aaaagaggtatgatcaatttcgtgagttgatcaaaatgcaatgaccaaaagtataattaagcctaaatataa 41260816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 43958256 - 43958206
Alignment:
Q  125 aatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||||||||||||  |||||||||| |||||||||| |||||||| ||||    
T  43958256 aatttcgtgagtagatcaaaacacgaagaccaaaagtataattaagtctaa 43958206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 42035932 - 42035773
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||| ||||||| ||||   |||| |||||| |||| ||||| | | || ||| || | |||| ||||||||| ||||     
T  42035932 ctaaaactgtcatttttgtgcgtttatggagttagaaatagggagataggactaaaattgcaaaatatat-atagtttatggacgattttgttcgattta 42035834  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    |||  || || || | |||||||||| || |||||   |||||||||||||||||||||||    
T  42035833 aaagaggtagaaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 42035773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 19590899 - 19591073
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19590899 ctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 19590998  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19590999 gttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaagcctaa 19591073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 38859015 - 38859189
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  38859015 ctaaaaccgcctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgtttt 38859114  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38859115 gttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 38859189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 2659010 - 2658837
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2659010 ctaaaacggcctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccatttt 2658911  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||    
T  2658910 gttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagccta 2658837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 32004785 - 32004612
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    |||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32004785 ctaaaaccgcttaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaatgataattgaaggaccatttt 32004686  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32004685 gttctgttttaaaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 32004612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 35289074 - 35288903
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    |||||||||  |||||||| |||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  35289074 ctaaaaccgcttaaaactgtcatttctctgtgtttctggagtttgaaaatatgaagtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 35288975  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||| |||| |||||||||||||||||||||    
T  35288974 gttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtgtaattaagcc 35288903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 175
Target Start/End: Original strand, 37787153 - 37787315
Alignment:
Q  13 aaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaa 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  |||||    
T  37787153 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgatttaa 37787252  T
Q  113 aagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||| ||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37787253 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcctaa 37787315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 34533962 - 34533789
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||| | |||||| || ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  34533962 ctaaaactgcctaaaagtgtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaatgataattgaatgaccatttt 34533863  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
     |||| ||||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34533862 attctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 34533789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 19830794 - 19830965
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  19830794 ctaaaaccgcctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggac-aaaaatgcaacaaaaatgataattgaagtaccgtttt 19830892  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||| | |||||||||| |||||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  19830893 gttatgttttaaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 19830965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 23952901 - 23952726
Alignment:
Q  2 taaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttg 101  Q
    |||||| | ||||||||  ||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||    
T  23952901 taaaactgcctaaaactatcatttctctgcgtttctggggtttgaaaatagaaggtaggacgaaaaatgcaaccaaaatgataattgaaggaccgttttg 23952802  T
Q  102 ttctattttaaaagggcaggactaatttcgtgagta-ggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    |||| ||||||||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  23952801 ttctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgaggaccaaaagtgtaattaagcctaat 23952726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 4641818 - 4641983
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||    
T  4641818 ctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaaatgataattgaaggaccgtttt 4641917  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||| |||||||||| |||||| | |   |||||||||||||||||||||||||||||||||||||||    
T  4641918 gttctgttttaaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 29100011 - 29099863
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  29100011 ctaaaactgtcatttatctacgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29099912  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaa 159  Q
    ||||||||||||  | |||||||||||||||||||||||||||||||||    
T  29099911 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaa 29099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 19830582 - 19830418
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  19830582 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 19830484  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19830483 ttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 19830418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 37786929 - 37786766
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||    
T  37786929 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtt 37786831  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||    
T  37786830 ttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 37786766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 19590687 - 19590525
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| |||||||||| |||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||    
T  19590687 gtctaaaactgtcatttctctgggtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 19590589  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  19590588 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 32004997 - 32005159
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| ||  |||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  32004997 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctatt 32005095  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||||||||| ||| | ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  32005096 ttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaagcc 32005159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 29100234 - 29100393
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||| ||||||||| ||    
T  29100234 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 29100332  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||    
T  29100333 ttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 38858805 - 38858642
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||| ||||||||| ||    
T  38858805 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 38858707  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||| ||||||| | ||||||||||| ||||||||||||||||||||||||| |||||||||    
T  38858706 ttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 38858642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 38161067 - 38160948
Alignment:
Q  56 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggacc 155  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||| || |||||||||||||||||||| ||||||||    
T  38161067 gtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattattttcgtgagtaggccaaaacccgaggacc 38160968  T
Q  156 aaaagtgtaattaagcctaa 175  Q
    ||||||||||||||||||||    
T  38160967 aaaagtgtaattaagcctaa 38160948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 35289284 - 35289453
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||   |||||||||||||| | |||  | ||||| || |||| ||||||||||||||| |||||||||||||||||||| ||||||||| ||    
T  35289284 gtctaaaactattatttctctgcgtttttagagaat-aaaatggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgtt 35289382  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaattat 179  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  35289383 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcctatttat 35289453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 34534174 - 34534338
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||  ||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  34534174 gtctaaaactgtcatttctctgtttttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 34534272  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||| ||||||||  | ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  34534273 ttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaagccta 34534338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 177
Target Start/End: Original strand, 2659223 - 2659390
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||    
T  2659223 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 2659321  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatt 177  Q
    ||||||||||| ||| | |||| ||| ||||||||||| |||||||||||| |||||||||||||||||    
T  2659322 ttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaagcctaatt 2659390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 4641602 - 4641443
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||  ||||||||||| ||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||| | ||    
T  4641602 gtctaaaactatcatttctctgcatttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttatgtt 4641504  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    | ||||| ||||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  4641503 tcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaa 4641443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 23953112 - 23953280
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  23953112 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 23953210  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaattat 179  Q
    || ||||||| |||| | ||||||||||||  ||||||||||||||||||| ||||| |||||||| ||||    
T  23953211 ttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaa-taagcctatttat 23953280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 4478083 - 4478247
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||||||||||||| |||||  | |||  ||| | || ||||||||||||||||||||||||||||||||||| || || |||| ||    
T  4478083 gtctaaaactgttatttctctgcgtttttggagaataaaatgagg-gataagacgaaaaatgcaacaaaaatgataattgaaggacaatgttattctgtt 4478181  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |||| ||||    
T  4478182 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaaaccta 4478247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 46 - 174
Target Start/End: Complemental strand, 28583565 - 28583437
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||||||  |||| || | |||||||||||||| || ||| || ||||||||||||||    
T  28583565 aaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatgagtaggccaaaa 28583466  T
Q  146 cacgaggaccaaaagtgtaattaagccta 174  Q
    |||||||||||||||||||||||||||||    
T  28583465 cacgaggaccaaaagtgtaattaagccta 28583437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 171
Target Start/End: Original strand, 28584341 - 28584466
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || |||| |||||||||| |||||||||||||||||||||||| |||||||||| |||||||||| || ||| |||||||||| |||||||||     
T  28584341 aaaatggggggtaagacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttcgtgaataggccaaag 28584440  T
Q  146 cacgaggaccaaaagtgtaattaagc 171  Q
    ||||||||| ||||||||||||||||    
T  28584441 cacgaggacgaaaagtgtaattaagc 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 4477860 - 4477702
Alignment:
Q  13 aaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaa 112  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||| |||| ||||| ||| |||||| || | |||| ||||| ||| |||| ||    
T  4477860 aaaactgtcatttccctgcgtttctggagtttgaaaataggaggtaggactaaaactgcaa-aaacatgatagtttagggacgattttattcaatttaaa 4477762  T
Q  113 aagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |  ||| |||| | |||||||| | || |||||    |||| ||| ||||||||||||||    
T  4477761 agaggcgggaccattttcgtgaattggtcaaaatgtaaggatcaatagtgtaattaagcc 4477702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 170
Target Start/End: Complemental strand, 9181692 - 9181534
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||| ||| || |||||| ||||||||| ||||     
T  9181692 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaat-atagtttaaggacgattttgttcgattta 9181594  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    |||| |  ||||| | |||||||||| || |||||    |||||||||||||||||||||    
T  9181593 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 9181534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 34595158 - 34595319
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||||| ||||||||||||||| ||||||| || ||||| || |||| ||||| ||| |||||| || | |||| ||||||||| ||||    
T  34595158 ctaaaactgtcatttctgtgcgtttctggagtt-gaaaataagggggtagcactaaaactgcaa-aaacatgatagtttagggacgattttgttcgattt 34595255  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
     |||   ||||||| | |||||||||| || |||||   |||||||||||||||||||||||||    
T  34595256 aaaagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcct 34595319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 173
Target Start/End: Complemental strand, 49064171 - 49064033
Alignment:
Q  33 tttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgt 132  Q
    ||||||||||| ||||||||||| |||||| |||| ||||| ||| |||||| || | |||  |||||||||||||| |||  ||||  || | ||||||    
T  49064171 tttctggagtt-gaaaataggagttaggactaaaagtgcaa-aaacatgatagtttatggaagattttgttctatttgaaagaggcaataccattttcgt 49064074  T
Q  133 gagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||  || ||||| |||||||||||||||||||||||||||    
T  49064073 gagctggtcaaaatacgaggaccaaaagtgtaattaagcct 49064033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 7732648 - 7732485
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||| | ||||||| ||||||| ||||||||| || |||||| |||| ||||| ||| || ||| || |||||| ||||||||| ||||    
T  7732648 ctaaaactgtcatttatgtgcgtttatggagtt-gaaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 7732551  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
     |||  || ||||| |||||||||||| |  |||||  | |||||||||| |||||||||||||||    
T  7732550 aaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaagcctaa 7732485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 172
Target Start/End: Complemental strand, 27245364 - 27245203
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||  ||||||| ||||||||||||||| ||||  ||||| |||||| |||| ||||| ||||   ||  ||   |||| ||||||||| ||||     
T  27245364 ctaaaactatcatttctgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaaaacatatggtttggggacgattttgttcgattta 27245265  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||  || ||||| |||||||||||| || |||||  | |||||||||||||||||||||||    
T  27245264 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 27245203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 48247977 - 48248141
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| | |||| |||| ||||| ||||   ||| || |||||| ||||||||| ||||     
T  48247977 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagatgggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattta 48248076  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||| |  ||||| | ||| |||||| || |||||    ||||||||||||||||||||||||||    
T  48248077 aaaaagataggaccatttttgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcctaa 48248141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 26026478 - 26026320
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||| || || ||| |||| ||||| ||||   ||| || | |||| ||||||||| ||||    
T  26026478 ctaaaactgtcatttctgtgcgtttctggagtt-gaaaatagggagataagactaaaactgcaaaaaaacatatagtttatggacgattttgttcgattt 26026380  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
     |||  || | ||| |||||||||||  || ||||| || ||||||||||||||||||||    
T  26026379 aaaagaggtatgaccaatttcgtgagctggtcaaaatacaaggaccaaaagtgtaattaa 26026320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 170
Target Start/End: Complemental strand, 9393894 - 9393738
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    |||||||| |||||| ||| |||||||||||| |||||||||||||||||| ||||  |||| ||| |||||| ||  |||||  |||||||| |||| |    
T  9393894 taaaactgtcatttcactgtgtttctggagtt-gaaaataggaggtaggactaaaacagcaaaaaacatgatagtt-taggacggttttgttcgatttga 9393797  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    ||  |||| ||| | |||||||||  |  |||||  |||||| ||||||||||||||||    
T  9393796 aagaggcaagacaattttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaag 9393738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 25637584 - 25637741
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| || |||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| ||||||||| ||||     
T  25637584 ctaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 25637682  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    |||| |  ||||| | |||||||||| || |||||    ||||||||||||||||||||    
T  25637683 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 25637741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 176
Target Start/End: Complemental strand, 25637357 - 25637193
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    |||||||| ||||| | ||||||||||||||| ||||   |||| |||||| |||| | ||| ||||   ||| || | |||| ||||||||| |||| |    
T  25637357 taaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactacaaaaaaacatatagtttagggacgattttgttcgatttaa 25637258  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    ||  || ||||| |||||| ||||| || ||| |  | |||||||||||||||||||||||||||    
T  25637257 aagaggtaggaccaatttcatgagttggtcaatatgcaaggaccaaaagtgtaattaagcctaat 25637193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 35579060 - 35578902
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||| || ||||||||||||||||||||| |||||||||||| ||||||  |||| ||||| ||| |||||| ||  | |||  |||||||| |||    
T  35579060 gtctaaaaatgtcatttctctgcgtttctggag-ttgaaaataggatgtaggattaaaactgcaaaaaacatgatagtt-tatgacggttttgttcgatt 35578963  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    | |||  |||||||| | ||| |||||  || |||||  | | ||||||||||||||||||    
T  35578962 tgaaagtggcaggaccatttttgtgagctggtcaaaatgcaatgaccaaaagtgtaattaa 35578902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 5334284 - 5334371
Alignment:
Q  91 ggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatta 178  Q
    |||| ||||||||| |||| |||  || ||||||| |||||||||| || |||||   |||||||||||||||||||||| |||||||    
T  5334284 ggacgattttgttcgatttaaaagaggtaggactattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagtctaatta 5334371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 39136998 - 39137080
Alignment:
Q  91 ggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||| ||||||||| |||| |||  |||||||| | |||||||||  || ||||| ||||||| |||||||||||||||||||    
T  39136998 ggacgattttgttcgatttaaaagaggcaggaccattttcgtgagcgggtcaaaatacgaggatcaaaagtgtaattaagcct 39137080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 15712525 - 15712366
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||||| ||||| ||||   |||| |||||| |||| | ||| ||| || ||| || |||||| ||||||||| ||||     
T  15712525 ctaaaactgtcatttatgtgcgtttctagagttggaaatagggagataggactaaaactacaaaaaatat-atagtttaaggacgattttgttcgattta 15712427  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    |||| |  ||||| | |||||||||| || |||||    ||||||||||||||||||||||    
T  15712426 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 15712366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 787251 - 787334
Alignment:
Q  91 ggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||| ||||||||| |||| |||  || ||||| | |||||||||| || ||||| ||||| ||||||||||||||||| ||||    
T  787251 ggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaaaccta 787334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 172
Target Start/End: Original strand, 26048409 - 26048492
Alignment:
Q  89 aaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||||| ||||||||  |||| |||  || ||||| |||||||||||| || |||||| | |||| ||||||||||||||||||    
T  26048409 aaggacaattttgtttgatttaaaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggaacaaaagtgtaattaagcc 26048492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 175
Target Start/End: Complemental strand, 33880748 - 33880617
Alignment:
Q  44 tgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaa 143  Q
    |||||||| | |||||||| |||| ||||| ||| ||||||||| | ||||  |||||||| |||| |||  ||||| || | ||| |||||  || |||    
T  33880748 tgaaaataaggggtaggactaaaagtgcaaaaaatatgataatttagggacggttttgttcgatttgaaagaggcagaacaatttttgtgagctggtcaa 33880649  T
Q  144 aacacgaggaccaaaagtgtaattaagcctaa 175  Q
    || ||||||||||||| || ||||||| ||||    
T  33880648 aatacgaggaccaaaaatgcaattaaggctaa 33880617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 39388738 - 39388813
Alignment:
Q  96 attttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    ||||||||| |||| |||  || ||||| |||||||||||| || |||||  | ||||||||||||||||||||||    
T  39388738 attttgttcgatttaaaagaggtaggacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 39388813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 786943 - 786781
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| || |||| ||||||| ||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||  ||||||||| ||||     
T  786943 ctaaaactgtcacttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggaaaattttgttcgattta 786844  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||| || | ||| | |||||||||| || |||||    |||| |||||||||||||||||||    
T  786843 aaaaaggtatgaccattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaagcct 786781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 16081685 - 16081846
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||| ||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || | |||  ||||||||| ||||     
T  16081685 ctaaaactgtcatttttgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggatgattttgttcgattta 16081783  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||  || ||||  |||||||||||| || |||||  | ||||||||| ||||||||||||||    
T  16081784 aaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaggtgtaattaagcct 16081846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 32427404 - 32427461
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 67  Q
    ||||||||||| ||||||||||||||| | ||| |||||||||||||| ||||| ||||    
T  32427404 gtctaaaactgtcatttctctgcgtttttagag-ttgaaaataggaggaaggactaaaa 32427461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 48247751 - 48247584
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatg---ataattgaaggaccattttgttctat 107  Q
    ||||||||| ||||||| ||||||| ||||||| ||||   |||| || ||| |||| ||||| |||||     ||| || | |||| ||||||||  ||    
T  48247751 ctaaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaaaaatatatactttagggacgattttgtttgat 48247652  T
Q  108 tttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    || |||  || ||||| |||||||||||| |  |||||  | ||||||||||||||||||||||||||    
T  48247651 ttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagcctaa 48247584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 173
Target Start/End: Original strand, 7732884 - 7733034
Alignment:
Q  22 atttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcag 120  Q
    |||||| ||| ||| ||||||| ||||||||| || |||||| |||| ||||| ||| || ||| || |||||| ||||||||| |||| |||| |  ||    
T  7732884 atttctgtgcatttatggagtt-gaaaatagggagataggactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgatttaaaaaagatag 7732981  T
Q  121 gactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||  | |||||||||| || |||||    ||||||||||||||||||||||||    
T  7732982 gatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcct 7733034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 173
Target Start/End: Complemental strand, 11971417 - 11971333
Alignment:
Q  89 aaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||||| ||||||||| |||| |||| |  ||||| | ||||||||||||| |||||    |||||||||||| |||||||||||    
T  11971417 aaggacgattttgttcgatttaaaaaagataggaccattttcgtgagtaggtcaaaatggtaggaccaaaagtataattaagcct 11971333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 147; Significance: 1e-77; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 12935328 - 12935154
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12935328 ctaaaaccgcctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 12935229  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12935228 gttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 12935154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 11445361 - 11445535
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11445361 ctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 11445460  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| |||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11445461 gttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 11445535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 22219727 - 22219901
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  22219727 ctaaaaccgcctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 22219826  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22219827 gttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 22219901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 10900102 - 10899942
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  10900102 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 10900003  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||    
T  10900002 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 23075502 - 23075675
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||| | ||||||||| ||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  23075502 ctaaaactgcctaaaactgtcatttctctgcatttttggagtttaaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 23075601  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||| ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23075602 gttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 23075675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31470486 - 31470314
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||  ||||    
T  31470486 ctaaaatcgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaatgactgtttt 31470387  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||| ||||||||| ||| ||| | ||||||||||||||||||||||||||| |||||||||||||||||||    
T  31470386 gttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 31470314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20741475 - 20741650
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa---atgataattgaaggaccat 97  Q
    ||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||| |    
T  20741475 ctaaaaccgcctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaaaaatgataattgaaggaccgt 20741574  T
Q  98 tttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||||||| ||||||||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||||    
T  20741575 tttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagcct 20741650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 20741262 - 20741098
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  20741262 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggaccattttgttctgtt 20741164  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20741163 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 20741098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 18505090 - 18504922
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    |||||| || ||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||    
T  18505090 ctaaaatcgcctaaaactgtcatttctctacatttctagagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgataattgaagaaccgtttt 18504991  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||| |||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  18504990 gttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 2319842 - 2319668
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||  |||||||||||||||||||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||    
T  2319842 ctaaaaccgcctaaaactatcatttctctgcgtttctggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 2319744  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    ||||| ||||||||||||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2319743 gttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctaat 2319668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 18257511 - 18257682
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||| ||| | ||||||| ||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  18257511 ctaaaaccgcctaaaactgtcatttctctacgtgtatggagttggaaaatatgaggtaggacgaaaaatgtaacaaaaataataattgaaggaccgtttt 18257610  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||| ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  18257611 gttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtataattaagcc 18257682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 18257299 - 18257135
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  18257299 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 18257201  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18257200 ttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagccta 18257135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 10900313 - 10900475
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  10900313 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 10900411  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||||||||| ||| | ||||||||||||||||||| ||||||||||||||||||||||||||    
T  10900412 ttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 10900475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 11276751 - 11276589
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  11276751 ctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgacaattgaaggaccattttgttctgtttt 11276652  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||| ||||  | |||| ||||||| |||||||||| |||| ||| ||||||||||||||    
T  11276651 aaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagcct 11276589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 28472798 - 28472634
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  28472798 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtt 28472701  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||||| |||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28472700 ttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcctaa 28472634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 29859987 - 29859823
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  29859987 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtt 29859890  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||||| |||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29859889 ttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcctaa 29859823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 15827810 - 15827639
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacc--att 98  Q
    ||||||||| |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  | |    
T  15827810 ctaaaaccgcctaaaa-tgtcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccgtaat 15827712  T
Q  99 ttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    ||||| | |||||||||| ||| || | ||||||||||| |||||||||||||||||||||||||||||||||    
T  15827711 ttgttatgttttaaaaggacagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 11276965 - 11277127
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||    
T  11276965 gtctaaaactgtcatttctcttcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgtt 11277063  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  11277064 ttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 11277127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 15828024 - 15828187
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||    
T  15828024 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtt 15828122  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  15828123 ttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15828187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 11445149 - 11444984
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| |||||||||| |||| | |||  | ||||| |  |||||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  11445149 gtctaaaactgtcatttctctgtgtttttagagaat-aaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttattctgtt 11445051  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11445050 ttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 11444984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 177
Target Start/End: Original strand, 1149814 - 1149982
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttct-ggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctat 107  Q
    ||||||||||| ||||||||||||||| | ||||  | ||||| || ||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  1149814 gtctaaaactgtcatttctctgcgttttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgttctat 1149912  T
Q  108 tttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatt 177  Q
    |||||||||||| ||| | |||| ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  1149913 tttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaagccaaatt 1149982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 12935540 - 12935704
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| |||||||||| |||| |||||  | ||||| || |||||||||||||||| |||||||||||||||||||||||| ||||||||| ||    
T  12935540 gtctaaaactgtcatttctctgtgtttatggagaat-aaaatggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgttttgttctgtt 12935638  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||| || |||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12935639 ttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaagccta 12935704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 31470700 - 31470860
Alignment:
Q  10 tctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||| || ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  31470700 tctaaaattgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttt 31470798  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    ||||||||||| || | |||||||||||||| ||||||| ||||||||||||||||||||||    
T  31470799 taaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaagc 31470860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 172
Target Start/End: Original strand, 4811641 - 4811801
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    |||||| |||||||| ||||||||| ||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  4811641 ctaaaattgccattt-tctgcgtttatggggtttgaaaataggaggtatgatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 4811739  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||  ||| ||  | |||| |||||||||||||||||||||| ||||||| ||||||||||    
T  4811740 aaaaatgcatgatcagtttcatgagtaggccaaaacacgaggatcaaaagtataattaagcc 4811801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 2322602 - 2322760
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| |||||||||| |||| |||||  | |||  ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  2322602 gtctaaaactgtcatttctctgtgttt-tggagaataaaatgagg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 2322699  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    |||||| |||| ||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  2322700 ttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 75 - 173
Target Start/End: Complemental strand, 23074096 - 23073998
Alignment:
Q  75 aaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  23074096 aaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 23073998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 18505305 - 18505463
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    |||||||| ||||||||| ||||  |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||| | |||||    
T  18505305 taaaactgtcatttctcttcgttgttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttatgtttta 18505403  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    |||||||||||  | |||||||||||| |||||||||||||||||||||| |||||||||    
T  18505404 aaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 46 - 170
Target Start/End: Complemental strand, 29033560 - 29033436
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || ||||||| ||||  ||||||||||||||||| ||||||||  ||||||||| ||||||||||||||||| ||||||||||| |||||||||    
T  29033560 aaaatggggggtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 29033461  T
Q  146 cacgaggaccaaaagtgtaattaag 170  Q
     ||||||||||||||||||||||||    
T  29033460 tacgaggaccaaaagtgtaattaag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 4811534 - 4811372
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||| ||||||||| || ||  | ||||| || |||| ||||||||||| |||||||||||||||||||||||| |||| |||||||    
T  4811534 gtctaaaactgttatttatctgcgtttttgaagaat-aaaatggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctatt 4811436  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||||||||| ||| | |||||||||||| |||||| ||  ||||||||||||||||||||||    
T  4811435 ttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagcc 4811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 29035069 - 29035180
Alignment:
Q  59 ggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaa 158  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||| |||||||||||||  || |||||||||||||||| ||||||||||||| |||    
T  29035069 ggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaatttcgtgagtaggctaaaacacgaggacgaaa 29035168  T
Q  159 agtgtaattaag 170  Q
    ||||||||||||    
T  29035169 agtgtaattaag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 1149553 - 1149463
Alignment:
Q  84 aattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 1149463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 46 - 178
Target Start/End: Original strand, 3835145 - 3835277
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || ||||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||  |||||||| | ||||||||||||| |||||    
T  3835145 aaaatggggggtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgagtaggtcaaaa 3835244  T
Q  146 cacgaggaccaaaagtgtaattaagcctaatta 178  Q
    |||  ||||||||||||||||||| ||| ||||    
T  3835245 cacatggaccaaaagtgtaattaaaccttatta 3835277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 18296262 - 18296142
Alignment:
Q  55 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggac 154  Q
    ||||||||||||||||||||||||||||||| ||||||||  ||||||||| |||||||||||||  |  ||||| ||||||| | ||||||||||||||    
T  18296262 ggtaggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggcaatatcaattttgtgagtaagtcaaaacacgaggac 18296163  T
Q  155 caaaagtgtaattaagcctaa 175  Q
     |||| | |||||||||||||    
T  18296162 taaaattataattaagcctaa 18296142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 5120856 - 5121018
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    |||||||| ||||||| ||||||| ||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || | |||| ||||||||| |||| |    
T  5120856 taaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgatttaa 5120954  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||  || |||| ||||||||||||| || |||||  | ||||||||||||||||||||||||||    
T  5120955 aagaggtaggaataatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctaa 5121018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 35163572 - 35163734
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccattttgttctattt 109  Q
    ||||||||| |||||||||| |||| ||||||| |||||||||||||||||| |||| ||||| |||||   ||| || | |||| ||||||||  ||||    
T  35163572 ctaaaactgtcatttctctgtgtttttggagtt-gaaaataggaggtaggactaaaactgcaaaaaaaacatatagtttagggacgattttgtttgattt 35163670  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
     |||  ||||| || | |||||||||  || |||||  || |||||||||||||||||||||||    
T  35163671 gaaagaggcagaaccattttcgtgagctggtcaaaatgcggggaccaaaagtgtaattaagcct 35163734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 31574111 - 31574272
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    |||||| || ||||| | ||||||||||||||| ||||||||| || || ||| |||| ||||| ||| || ||| || | |||| ||||||||| ||||    
T  31574111 ctaaaattgtcatttatgtgcgtttctggagtt-gaaaatagggagatatgactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattt 31574208  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
     |||  || | |||||||||||||||| || |||||  | ||||||||||||||||||||||||    
T  31574209 aaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 31574272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 172
Target Start/End: Original strand, 31073528 - 31073688
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||| ||||||   ||| || | |||| ||||||||| ||||     
T  31073528 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgc-acaaaacatatagtttagggacaattttgttcgattta 31073626  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||  || | ||| |||||||||||  || |||||  | |||||||||||||||||||||||    
T  31073627 aaagaggtatgaccaatttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagcc 31073688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 22534214 - 22534270
Alignment:
Q  116 ggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||||||| | |||||||||| || ||||| ||||||||||||||||||||||||||    
T  22534214 ggcaggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagcc 22534270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 172
Target Start/End: Original strand, 25472398 - 25472559
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||||||||| | ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| ||||||||| ||||     
T  25472398 ctaaaactgtcatttctgtgcgtttctggagctggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattta 25472497  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||| |  | ||| | |||||||||| || |||||    |||| ||||||||||||||||||    
T  25472498 aaaaagataagaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaagcc 25472559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 32836381 - 32836542
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||||||| |||||||| || |||||||||| ||||||||| |||| ||||| ||| || | | || ||| ||  |||||||| |||    
T  32836381 gtctaaaactgttatttctcttcgtttctgaag-ttgaaaatagaaggtaggactaaaactgcaaaaaacat-acagtttaagaacggttttgttcgatt 32836478  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    | |||  |||| ||| | |||||||||  || |||||  | ||||| |||||||||||||||||    
T  32836479 tgaaagaggcatgaccattttcgtgagctggtcaaaatgcaaggactaaaagtgtaattaagcc 32836542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 5114628 - 5114467
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| || |||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| ||||||||| ||||     
T  5114628 ctaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 5114530  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||| |  ||||| | |||||||||| |  |||||    |||| ||||| |||||||||||||    
T  5114529 aaaaagataggaccattttcgtgagttgatcaaaatggtaggatcaaaaatgtaattaagcct 5114467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 32836163 - 32836114
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtag 59  Q
    ||||||||||| |||||||||| ||||| |||| |||||||||||||||||    
T  32836163 gtctaaaactgtcatttctctgtgtttcaggag-ttgaaaataggaggtag 32836114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 31573885 - 31573817
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 79  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||    
T  31573885 ctaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaa 31573817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 1e-77; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 239726 - 239896
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  239726 ctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaacgcaacaaaaatgataattgaaggaccatttt 239825  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  239826 gttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaagc 239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 43058707 - 43058885
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43058707 ctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccatttt 43058805  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaattata 180  Q
    ||||| ||||||||| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  43058806 gttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcctaaatata 43058885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 22374699 - 22374872
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22374699 ctaaaaccgcctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 22374798  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22374799 gttctgttttaaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22374872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 40027514 - 40027682
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  40027514 ctaaaaccgcctaaaactgccatttcactgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgtttt 40027613  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40027614 gttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 18451001 - 18450829
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  18451001 ctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaaaatgataattgaaggaccgtttt 18450902  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||| |||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  18450901 gttctgttttaaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 18450829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 28616988 - 28617160
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    |||||| || |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28616988 ctaaaatcgcctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaggaccatttt 28617087  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||| |||||||||| ||| || | |||||||||||||||||||||||||||||||||||||||||||||||    
T  28617088 gttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 28617160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 7446720 - 7446894
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7446720 ctaaaaccgcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 7446819  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| ||||||||||||||||| | ||||||||||| | ||||||||||||| ||||| |||||||||||||||    
T  7446820 gttctgttttaaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaagcctaa 7446894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 26538461 - 26538627
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  26538461 gtctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 26538560  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26538561 ttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 26538627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 1978483 - 1978656
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    |||||||||  |||||||||||||||| || |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||    
T  1978483 ctaaaaccgcataaaactgccatttctttgtgtttctagagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgtttt 1978582  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1978583 gttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagccta 1978656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 40815516 - 40815347
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  40815516 ctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgtttt 40815417  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    ||| | ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  40815416 gttatgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 40815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 11090894 - 11091067
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||| || ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| ||||    
T  11090894 ctaaaaccgcctaaaattgtcatttatctgcgtttctggagtttgaaaataggagataggacgaaaaatacaacaataatgataattgaaggaccgtttt 11090993  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||| ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11090994 gttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11091067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 11090683 - 11090519
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  11090683 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 11090585  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11090584 ttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 11090519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 12 - 172
Target Start/End: Original strand, 3025848 - 3026006
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | |||||    
T  3025848 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgtt-tgtttta 3025946  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  3025947 aaagggcagaaccaatttcgtgagtaagccaaaacacgaggaccaaaa-tgtaattaagcc 3026006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 8425525 - 8425358
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    |||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||    
T  8425525 ctaaaaccgcttaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacacaaatgataattgaa-gaccgtttt 8425427  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||| |||||||| || | ||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  8425426 gttctgttttaaaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 14432525 - 14432689
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||| |||| ||||    
T  14432525 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaataataattgaagaaccattttattctgtttt 14432624  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||| |||| ||| | |||| |||||||||||||||||||||||||||| |||||||||| ||||    
T  14432625 aaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaaggctaa 14432689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 176
Target Start/End: Complemental strand, 239514 - 239349
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  239514 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 239416  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    |||||| |||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  239415 ttaaaa-ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcctaat 239349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 18451214 - 18451379
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||| ||||||||| |||||||||| ||    
T  18451214 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggaagaaaaatgcaacaaaaatgatatttgaaggactattttgttctgtt 18451312  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18451313 ttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 18451379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 22374482 - 22374318
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||  ||||||| ||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  22374482 gtctaaaactatcatttctttgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 22374384  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22374383 ttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22374318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 40815728 - 40815893
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||||| || ||||||||| ||    
T  40815728 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagggccgttttgttctgtt 40815826  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||||||||||  || | ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40815827 ttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaa 40815893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 8425743 - 8425902
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||||||||||  ||||||||||||    
T  8425743 gtctaaaactgtcatttctctgcgtttttggagaat-aaaattgggggtaagacgaaaaatgcaacaaaaatgataattgaaggacagttttgttctatt 8425841  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||||||||||||| |||||||||||||| ||||||||| || |||||||||||||||||    
T  8425842 ttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 40027302 - 40027139
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| |  |||||||| |||||||||||||||||||||||||||||||| ||||||||| ||    
T  40027302 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggagggtaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 40027204  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||||||| ||| | |||||||||||||||||||||||| ||||||||||||||||||||||    
T  40027203 ttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcct 40027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 28616776 - 28616613
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||| |||||||||||||| | |  |   ||||| || ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||    
T  28616776 gtctaaaactgctatttctctgcgttttttggataataaaatggggggtaggacgaaaattgcaacaaaaatgataattgaaggaccgttttgttctgtt 28616677  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  28616676 ttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 28616613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 1978270 - 1978106
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |  ||||| |||||||||||||||||||||||||||||||| ||||||||| ||    
T  1978270 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 1978172  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||||||| | |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  1978171 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaagccta 1978106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 14432304 - 14432145
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||| ||||||||||||||||||||| |||||||||| ||||||| ||||    
T  14432304 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgttttgttatatt 14432206  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||||||||| ||| | |||| ||||||||||||||||||||||||||||||||||||||    
T  14432205 ttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 26538259 - 26538096
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  ||||||||| |||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||||||||  |||||||| ||    
T  26538259 gtctaaaactgttatttctctgtgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgctttgttctgtt 26538161  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||||||||||| || | ||||||||||| |||||||||||||||||||||||||||||||||||    
T  26538160 ttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcct 26538096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 46 - 173
Target Start/End: Complemental strand, 20444875 - 20444748
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || ||||||||||||| ||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| | |||||||||| ||||||||    
T  20444875 aaaatggggggtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaa 20444776  T
Q  146 cacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||||||||||||||||||||||||    
T  20444775 cacgaggaccaaaagtgtaattaagcct 20444748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 43058495 - 43058333
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||| ||||| |||||  | ||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  43058495 gtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 43058397  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||||| |||||||| | ||| |||||| |||||||||||||||| ||||||||||||||||||    
T  43058396 ttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagcc 43058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 177
Target Start/End: Complemental strand, 3025627 - 3025461
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||| ||||||| | |||  | ||||| || |||||||||||||||||||||||||||||| |||||||||| ||||||||| ||    
T  3025627 gtctaaaactgtcatttctttgcgttttttgagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtt 3025530  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatt 177  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  3025529 ttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaatcaaacctaatt 3025461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 28847122 - 28847242
Alignment:
Q  54 aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgagga 153  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||| | |||||||||||| ||||||||||||||    
T  28847122 aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgagga 28847221  T
Q  154 ccaaaagtgtaattaagccta 174  Q
    |||||| ||||||||||||||    
T  28847222 ccaaaaatgtaattaagccta 28847242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 15 - 173
Target Start/End: Complemental strand, 7446497 - 7446341
Alignment:
Q  15 aactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaa 114  Q
    ||||| ||||||||||||||| |||||  | ||||| || |||| |||||||||||||| |||||||||||||||| |||| ||||||||| ||||||||    
T  7446497 aactgtcatttctctgcgtttttggagaat-aaaatggg-ggtatgacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctgttttaaaa 7446400  T
Q  115 gggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||||| |||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  7446399 gggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagcct 7446341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 20440461 - 20440579
Alignment:
Q  57 taggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggacca 156  Q
    ||||||||||| ||||||||||||||||| |||| |||| ||||||||| ||||||||||||||||| | |||||||||| |||||||||||||||||||    
T  20440461 taggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggacca 20440560  T
Q  157 aaagtgtaattaagcctaa 175  Q
    |||||||||||||||||||    
T  20440561 aaagtgtaattaagcctaa 20440579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 46 - 172
Target Start/End: Complemental strand, 35779834 - 35779708
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| | ||||||||||| | |||||    
T  35779834 aaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttcgtgagtatgtcaaaa 35779735  T
Q  146 cacgaggaccaaaagtgtaattaagcc 172  Q
    |||||||||||||||||||||||||||    
T  35779734 cacgaggaccaaaagtgtaattaagcc 35779708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 35781093 - 35781207
Alignment:
Q  57 taggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggacca 156  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||| ||| | ||||||||||||||||||||||||||| ||    
T  35781093 taggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgaggatca 35781192  T
Q  157 aaagtgtaattaagc 171  Q
    |||||||||||||||    
T  35781193 aaagtgtaattaagc 35781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 46 - 170
Target Start/End: Complemental strand, 8972363 - 8972239
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    |||||||| ||||| |||||||||||||||||||||||||||||| ||| |||||||||| |||| |||||||| ||| | ||||||||| | |||||||    
T  8972363 aaaatagggggtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttcgtgagcatgccaaaa 8972264  T
Q  146 cacgaggaccaaaagtgtaattaag 170  Q
    |||||||||||||||||||||||||    
T  8972263 cacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 15551612 - 15551501
Alignment:
Q  59 ggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaa 158  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||| | |||||||| |||| ||| | |||||||||||  |||||||||||||||||||    
T  15551612 ggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccattttcgtgagtaaaccaaaacacgaggaccaaa 15551513  T
Q  159 agtgtaattaag 170  Q
    ||||||||||||    
T  15551512 agtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 15552482 - 15552596
Alignment:
Q  55 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggac 154  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||||||||| |||||||||||| |||  | |||||||||||||||||||||  | |||    
T  15552482 ggtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcgtgagtaggccaaaacattatgac 15552580  T
Q  155 caaaagtgtaattaag 170  Q
    ||||||||||||||||    
T  15552581 caaaagtgtaattaag 15552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 28143414 - 28143579
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| |||| ||||| ||| |||||| || | |||| ||||||||| |||    
T  28143414 gtctaaaactgtcatttctctgcgtttctggagtt-gaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacgattttgttcgatt 28143511  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    | |||  |||||||| | |||||||||  || |||||  ||||||||||||||| |||||||||||||    
T  28143512 tgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagcctaat 28143579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 14942228 - 14942394
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa--tgataattgaaggaccattttgttcta 106  Q
    |||||||||||| |||||||||| ||||||||||| |||||||||| ||||||| |||| ||||| |||||  |||||||| | |||| ||||||||| |    
T  14942228 gtctaaaactgcgatttctctgcatttctggagtt-gaaaataggatgtaggactaaaactgcaaaaaaaacatgataatttatggacaattttgttcga 14942326  T
Q  107 ttttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||| |||  | || ||| | |||||||||  || |||||  ||| |||||||||||||||||||||||    
T  14942327 tttgaaagagacaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaagccta 14942394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 31797166 - 31797324
Alignment:
Q  13 aaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaa 112  Q
    ||||||| ||||||||||||||||| ||||| |||||||||||||||||| |||| ||||| ||| || ||| || | ||||  |||||||| |||| ||    
T  31797166 aaaactgtcatttctctgcgtttctagagtt-gaaaataggaggtaggactaaaactgcaaaaaacat-atagtttagggacggttttgttcgatttgaa 31797263  T
Q  113 aagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |  |||| ||| | |||||||||  || |||||   |||||||||||||||||||||||||    
T  31797264 agaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaagcct 31797324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 172
Target Start/End: Complemental strand, 4355915 - 4355755
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||| | ||||||||||||||| ||||||||| || |||||| |||| ||||| ||| || ||| || | |||| ||||||||| ||||    
T  4355915 ctaaaactgtcatttatgtgcgtttctggagtt-gaaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattt 4355818  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
     |||  || | ||| ||||||||||||||| |||||  | |||||||||||||||||||||||    
T  4355817 aaaagaggtatgaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaagcc 4355755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 63117 - 62954
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||||| ||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| ||||||||| |||||    
T  63117 ctaaaactgtcatttatgtgcgtttcttgagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgatttt 63019  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||| || ||||| | |||||||||| || |||||    ||||||| ||||||||||||||||||    
T  63018 aaaaaggtaggaccattttcgtgagttggtcaaaatggaaggaccataagtgtaattaagcctaa 62954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 20128123 - 20128286
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| ||||||||  ||||     
T  20128123 ctaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaacat-atagtttaaggacgattttgtttgattta 20128221  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||  || ||||| |||||||||||| ||  ||||  | ||||||||||||||||||||||||||    
T  20128222 aaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaagcctaa 20128286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 38008110 - 38007947
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    |||||||| ||||||| ||||||| ||||||| ||||   |||| || ||| |||| ||||| ||||   ||| || | |||| ||||||||| |||| |    
T  38008110 taaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaa 38008011  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||  || ||||| |||||||||||| || |||||  | ||||||||||||||||||||||||||    
T  38008010 aagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctaa 38007947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 44219804 - 44219642
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || |||||| |||||| ||||||||| ||||     
T  44219804 ctaaaactgtcatttctgtgcgtttctggagttggaaacagggagataggactaaaactgcaaaaaacat-ataatttaaggacaattttgttcgattta 44219706  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||| || ||||  | ||| |||||| |  |||||    |||||||||||||||||||||||||    
T  44219705 aaaaaggtaggatcatttttgtgagttgatcaaaatggaaggaccaaaagtgtaattaagccta 44219642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 172
Target Start/End: Complemental strand, 42192400 - 42192240
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || | |||| ||||||||| ||||     
T  42192400 ctaaaactgtcatttatgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattta 42192302  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||  || ||||| | |||||||||| || |||||   ||||||||||||||||||||||||    
T  42192301 aaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 42192240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 42192628 - 42192790
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggagg-taggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||||| ||||||||||||||| |||| |||| || || ||| |||| ||||| ||||    || || | |||| ||||||||| ||||    
T  42192628 ctaaaactgtcatttctgtgcgtttctggagttggaaa-tagggggatatgactaaaactgcaaaaaaacatctagtttagggacgattttgttcgattt 42192726  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
     |||  || ||||| | |||||||||| || |||||  ||||||||||||||||||||||||||    
T  42192727 aaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcct 42192790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 43216095 - 43216256
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaatag-gaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    |||||| || ||||||| ||| ||||||||||| |||| ||| ||| |||||| |||| ||||| ||| || ||| || | |||| ||||||||| ||||    
T  43216095 ctaaaattgtcatttctgtgcatttctggagttggaaa-tagagagataggactaaaactgcaaaaaatat-atagtttagggacgattttgttcgattt 43216192  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
     |||  || ||||| |||||||||||| || |||||| | ||||| ||||||||||||||||||    
T  43216193 aaaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggactaaaagtgtaattaagcct 43216256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 11539798 - 11539636
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| ||||||||| ||||     
T  11539798 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattta 11539699  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||    ||||| | |||||||||| || |||||    ||||||||||||||||||||||||    
T  11539698 aaaaaaataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcct 11539636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 15550834 - 15550669
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||| |  |||||| |||| ||||| ||||   ||| || | |||| ||||||||| ||||    
T  15550834 ctaaaactgtcatttctgtgcgtttctggagtt-gaaaatagggaaataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 15550736  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
     |||  || ||||| |||||||||||| || || ||  | |||| ||||||||||||||| ||||||    
T  15550735 aaaagaggtaggaccaatttcgtgagttggtcagaatgcaaggatcaaaagtgtaattaaacctaat 15550669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 176
Target Start/End: Original strand, 16175735 - 16175900
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| ||||||||| ||||     
T  16175735 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattta 16175834  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    |||  || | ||| |||||||||||| ||  ||||    ||||||||||||||||||| |||||||    
T  16175835 aaagaggtatgaccaatttcgtgagttggtaaaaatgtaaggaccaaaagtgtaattatgcctaat 16175900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 172
Target Start/End: Original strand, 6949850 - 6949990
Alignment:
Q  33 tttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatg-ataattgaaggaccattttgttctattttaaaagggcaggactaatttcg 131  Q
    ||||||||||||||||   |||| |||||| |||| ||||| |||||   ||| || | |||| |||||||||||||| |||   | ||||| |||||||    
T  6949850 tttctggagtttgaaatatggagataggactaaaactgcaaaaaaaaaatatagtttagggacgattttgttctatttaaaagatgtaggaccaatttcg 6949949  T
Q  132 tgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||| || |||||  | |||||||||||||||||||||||    
T  6949950 tgagttggtcaaaatgcaaggaccaaaagtgtaattaagcc 6949990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 16953320 - 16953479
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||| ||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || | ||||  |||||||| ||||     
T  16953320 ctaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaacat-atactttagggacatttttgttcgattta 16953418  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    |||  || ||||| |||||| ||||| || |||||  | ||||||||||||||||||||||    
T  16953419 aaagaggtaggaccaatttcatgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 16953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 33920997 - 33921161
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||||| ||||| ||||   |||| |||||| |||| ||||| ||||    || || || ||| ||||||||| ||||     
T  33920997 ctaaaactgtcatttctgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaaaacatttagtttaaagacgattttgttcgattta 33921096  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||| |  ||||| | |||||||||| || |||||    ||||||||||||||||||||||||||    
T  33921097 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcctaa 33921161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 32418317 - 32418158
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    |||||| || ||||||| ||||||||||||||| ||||  ||||| || ||| |||| ||||| ||| || ||| || | |||| ||||||||| |||      
T  32418317 ctaaaaatgtcatttctgtgcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaatat-atagtttagggacgattttgttcgatt-- 32418221  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||  || ||||| |||||||||||| || |||||  | ||||||| ||||||||||||||||    
T  32418220 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccataagtgtaattaagcct 32418158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 6949612 - 6949450
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||| ||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| ||||||||| ||||     
T  6949612 ctaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagttaaaggacgattttgttcgattta 6949513  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||| |  ||||| | ||||||||||  | |||||    |||||||||| |||||||||||||    
T  6949512 aaaaagataggaccattttcgtgagttagtcaaaatgataggaccaaaaatgtaattaagcct 6949450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 176
Target Start/End: Original strand, 25336056 - 25336150
Alignment:
Q  82 ataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    |||||| | |||| ||||||||| |||| |||   | ||||| |||||||||||| || |||||  | |||||||||||||||||||||||||||    
T  25336056 ataatttagggacgattttgttcgatttaaaagaagtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcctaat 25336150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 38008337 - 38008498
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||  ||||| | ||||||| ||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| ||||||||| ||||     
T  38008337 ctaaaactatcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 38008435  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||| |  ||||| | |||||||||| || |||||    ||||||||||||||||||||||||    
T  38008436 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcct 38008498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 43160170 - 43160007
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaacaaaaatg-ataattgaaggaccattttgttctatt 108  Q
    ||||||||| ||||| | ||||||||||||| ||||||||| |||| |||||| |||| ||||| ||||||| ||| || | |||| ||||||||| |||    
T  43160170 ctaaaactgtcatttatgtgcgtttctggag-ttgaaaatagggagataggactaaaactgcaa-aaaaatgtatagtttagggacgattttgttcgatt 43160073  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    | |||  || | ||| |||||||||||| |  |||||  | |||||||||| ||||||||| ||||    
T  43160072 taaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaatccta 43160007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 43160397 - 43160558
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    |||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| |||| |||| |||| |    
T  43160397 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgatttagttcgatttaa 43160496  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||| |  ||||| | ||||||||||  | |||||    |||||| |||||||||||||||||    
T  43160497 aaaagataggaccattttcgtgagtttgtcaaaatggtaggacctaaagtgtaattaagcct 43160558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 2190530 - 2190612
Alignment:
Q  80 tgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtg 162  Q
    |||||||| | |||| ||||||||| |||| |||| |||||||| |||||||||||  || |||||  ||| |||||||||||    
T  2190530 tgataatttagggacgattttgttcgatttgaaaaaggcaggaccaatttcgtgagctggtcaaaatgcgatgaccaaaagtg 2190612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 20127897 - 20127735
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    |||||| || ||||| | ||||||||||| ||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| ||||||||| ||||     
T  20127897 ctaaaattgtcatttttgtgcgtttctggggttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattta 20127798  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||| |  ||||| | |||||||| | || |||||    ||||||||||||||||||||||||    
T  20127797 aaaaagataggaccattttcgtgaattggtcaaaatggtaggaccaaaagtgtaattaagcct 20127735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 24140139 - 24140224
Alignment:
Q  91 ggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    |||| ||||||||  |||| |||| || ||||| | |||||||||| || ||| |  |||||| ||||||||||||||||||||||    
T  24140139 ggacgattttgtttgatttaaaaaaggtaggaccattttcgtgagttggtcaagatgcgaggaacaaaagtgtaattaagcctaat 24140224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 3824179 - 3824251
Alignment:
Q  97 ttttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    |||||||| |||| ||||||||| ||| |||||||||||| ||  ||||  ||| |||||||||| |||||||    
T  3824179 ttttgttcgatttaaaaagggcatgaccaatttcgtgagttggttaaaatgcgatgaccaaaagtataattaa 3824251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 5e-77; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 19359510 - 19359683
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  19359510 ctaaaaccgcctaaaactgccatttctctacgtttctggagtttgaaaataggaggtaggacgaaaaatccaacaaaaatgataattgaaggaccgtttt 19359609  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19359610 gttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 19359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 5819100 - 5818927
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||    
T  5819100 ctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaagaccgtttt 5819001  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5819000 gttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 5818927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 8647812 - 8647986
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  8647812 ctaaaaccgcctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 8647911  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| ||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8647912 gttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 8647986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 16018961 - 16019142
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  16018961 ctaaaaccgtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaagaaccatttt 16019060  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaattataaac 183  Q
     |||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||| ||| |||||||||    
T  16019061 attctattttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaaacct-attataaac 16019142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 2864925 - 2864756
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2864925 ctaaaaccgcctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 2864826  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    ||| | ||||||||||||| ||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  2864825 gttatgttttaaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 8461305 - 8461477
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||    
T  8461305 ctaaaaccgcctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcagcaaaaatgataattgaaggaccgtttt 8461404  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||| ||||||||| ||||||  | |||||||||||||||||||||||||||||||||||||||||||||||    
T  8461405 gttctgttttaaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 8461477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 25000463 - 25000635
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  25000463 ctaaaaccgtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaatgaccatttt 25000562  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||| |||||||||  || ||| ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  25000563 gttctgttttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagcct 25000635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 14215412 - 14215243
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  14215412 ctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataactgaaggaccttttt 14215313  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    ||||| ||||||||||| |  || | ||||||||||| ||||||||||||||||||||||||||||||||    
T  14215312 gttctgttttaaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 29454911 - 29454739
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||    
T  29454911 ctaaaaccgcctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcagcaaaaatgataattcaaggaccgtttt 29454812  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||||||| | ||||||||||| ||||||||||    
T  29454811 gttctgttttaaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagcct 29454739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 18183141 - 18182968
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||| | ||||||||| ||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18183141 ctaaaactgcctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 18183042  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||| ||||||||||||| ||| | |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  18183041 gttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaaaccta 18182968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 24331732 - 24331556
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaat--gataattgaaggaccatt 98  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||   ||||||||||||||| ||    
T  24331732 ctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaaatagataattgaaggaccgtt 24331633  T
Q  99 ttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||||| ||||||||||||||||| | ||||||||||||  |||||||||||||||||||||||||||||||||||    
T  24331632 ttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagcctaa 24331556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 164361 - 164191
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    |||||||||  ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||    
T  164361 ctaaaaccgcataaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaatgaccgtttt 164263  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||| | || |||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||    
T  164262 gttttgttataaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 164191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 8647600 - 8647438
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8647600 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtt 8647502  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  8647501 ttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8647438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 19359298 - 19359136
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||| ||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19359298 gtctagaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatt 19359200  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||    
T  19359199 ttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagcc 19359136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 12 - 170
Target Start/End: Complemental strand, 15372030 - 15371873
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    |||||||  ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15372030 taaaactatcatttctctgcgtttctagagtttgcaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 15371931  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    |||||||||||| || ||||||||||| |||||| ||||||| ||||||||||||||||    
T  15371930 aaagggcaggaccaa-ttcgtgagtagaccaaaatacgaggatcaaaagtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 18183352 - 18183517
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||||||||||||| |||||  | |||  ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  18183352 gtctaaaactgttatttctctgcgtttttggagaataaaatgagg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 18183450  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18183451 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 18183517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 2865138 - 2865302
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||| ||||| |||||  | ||||| || |||||||||||||||| |||||||||||||||||||||||| ||||||||| ||    
T  2865138 gtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgaaacaaaaatgataattgaaggaccgttttgttctgtt 2865236  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2865237 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 2865302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 29455125 - 29455288
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  29455125 gtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtt 29455223  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||||||||||| | |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  29455224 ttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagcct 29455288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 15709343 - 15709513
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||| ||||    
T  15709343 ctaaaaccgcctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaacagaaatgataactaaaggaccgtttt 15709442  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||| |||| |||||||| ||||| |||| ||||||||||||||||| | |||||||||||||||||||||    
T  15709443 gttctgtttt-aaagggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaagcc 15709513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 5819313 - 5819474
Alignment:
Q  10 tctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    |||||||||| ||||||| ||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||| |||    
T  5819313 tctaaaactgtcatttctttgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttt 5819411  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  5819412 taaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 24362219 - 24362383
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| |||||||||| |||| |||| ||    
T  24362219 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttattctgtt 24362317  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24362318 ttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccta 24362383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 15372256 - 15372421
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| ||||   | ||||| ||| |||| || ||||||||||||||||||||| |||||||||| ||||||||| ||    
T  15372256 gtctaaaactgtcatttctctgcgtttttggaaaat-aaaatgggatgtagaacaaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtt 15372354  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15372355 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaa 15372421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 15709132 - 15708968
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||| |||||||||||||||||||||||||||| ||||||||| ||    
T  15709132 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgtt 15709035  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||||||||||  || | |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15709034 ttaaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagcctaa 15708968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 8461092 - 8460928
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||| ||| |||||  | ||||| || |||| ||||||||||||||||||||||||||||||| |||| ||||||||| ||    
T  8461092 gtctaaaactgtcatttctctgcatttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 8460994  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||||||| | ||||||||||||||||||| |||| ||||||||||| |||||||||||    
T  8460993 ttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaagccta 8460928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 14463904 - 14464067
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  14463904 gtctaaaactgtcatttctctgcgtttttggagaat-aaaattgg-ggtaggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttctatt 14464001  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||||||| ||  | || |||||||||||||||||||||||||||| |||||||||||||||||||    
T  14464002 ttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagccta 14464067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 14215626 - 14215791
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||| ||||| |||||  | ||||| || | || ||||||||||||||||||||||||| |||||||||| ||||||||| ||    
T  14215626 gtctaaaactgtcatttctctacgtttttggagaat-aaaatgggggttaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtt 14215724  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||||||||||||  | ||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  14215725 ttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagcctaa 14215791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 24362007 - 24361843
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||  ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| |||||||||||||||    
T  24362007 ctaaaaccgcctaaaactatcatttctctgcgtttgtggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccatttt 24361909  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 166  Q
    ||||| ||||| ||||||| ||  | ||||||| ||||||||||||| | ||||||||||||||||    
T  24361908 gttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 24325382 - 24325218
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||  ||||||||||||||| |||||  | ||||| || ||||||||||||||||| |||||||||||| |||||||||||||||    
T  24325382 ctaaaaccggctaaaactatcatttctctgcgtttgtggagaat-aaaatggggggtaggacgaaaaatgcgacaaaaatgatacttgaaggaccatttt 24325284  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaat 166  Q
    ||||| ||||| ||||||| ||  | ||||||| ||||||||||||| | ||||||||||||||||    
T  24325283 gttctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 164574 - 164739
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||| | ||| |||||  | ||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||| ||    
T  164574 gtctaaaactgtcatttctctacatttttggagaat-aaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 164672  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||||||||| ||| | ||| |||||| |||||||||| ||||| ||||| | |||||||||||||    
T  164673 ttaaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaagcctaa 164739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 16018705 - 16018588
Alignment:
Q  55 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggac 154  Q
    ||||||||| ||||||||| |||||| |||||||||||||| ||||||||||||||||||||||| ||  |||||||||| ||||||||||||||| |||    
T  16018705 ggtaggacggaaaatgcaataaaaat-ataattgaaggaccgttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagac 16018607  T
Q  155 caaaagtgtaattaagcct 173  Q
    |||||||||||||||||||    
T  16018606 caaaagtgtaattaagcct 16018588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 4222150 - 4222266
Alignment:
Q  55 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggac 154  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||||| ||||||||||||| ||| | ||||||||| || |||||||||||||||    
T  4222150 ggtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgaggac 4222249  T
Q  155 caaaagtgtaattaagc 171  Q
    |||||||||||||||||    
T  4222250 caaaagtgtaattaagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 7349436 - 7349562
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || ||||||| ||||| ||||||||||||||||| |||||||   ||||||| | ||||||||| ||||||| |||||||||||||| ||||||    
T  7349436 aaaatggggggtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaatttcgtgagtagaccaaaa 7349535  T
Q  146 cacgaggaccaaaagtgtaattaagcc 172  Q
    |||||||||||||||||||||||||||    
T  7349536 cacgaggaccaaaagtgtaattaagcc 7349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 4623265 - 4623148
Alignment:
Q  55 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggac 154  Q
    ||||||||| ||||||| | |||||||||||||||||||| |||||||||| |||||||  |||||||| ||||||||||||| | |||||||||| |||    
T  4623265 ggtaggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcgtgagtaagtcaaaacacgatgac 4623166  T
Q  155 caaaagtgtaattaagcc 172  Q
    ||||||||||||||||||    
T  4623165 caaaagtgtaattaagcc 4623148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 25000251 - 25000112
Alignment:
Q  10 tctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    |||||||||| ||||||||| ||||| |||||  | ||||| || |||||||| |||||||||| ||||||||||||| |||||||||||| |||| |||    
T  25000251 tctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacaaaaaatgcaataaaaatgataattaaaggaccattttattctgttt 25000153  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacga 150  Q
    ||| |||||| ||| || |||||||||||||||||||||||    
T  25000152 taacagggcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 46 - 172
Target Start/End: Complemental strand, 7348685 - 7348559
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || ||||||||||||| |||||||||||||||||  ||||||   ||||||||| ||||||||||||| ||| |||||||||||||| | ||||    
T  7348685 aaaatggggggtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaa 7348586  T
Q  146 cacgaggaccaaaagtgtaattaagcc 172  Q
    || ||||||||||| ||||||||||||    
T  7348585 catgaggaccaaaaatgtaattaagcc 7348559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 4219780 - 4219663
Alignment:
Q  55 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggac 154  Q
    ||||||||||||||||||||||||||||||| | |||||| | |||||||| |||||||| |||| ||| | ||| || | ||| ||||||||||||||     
T  4219780 ggtaggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgtaaatagcccaaaacacgaggat 4219681  T
Q  155 caaaagtgtaattaagcc 172  Q
    ||||||||||||||||||    
T  4219680 caaaagtgtaattaagcc 4219663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 6018441 - 6018315
Alignment:
Q  44 tgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaa 143  Q
    |||||||||  |||||||| |||| ||||||||||||||||||||||| |  |||||||||| |||||||||| || ||| | ||||||||||||  |||    
T  6018441 tgaaaatagagggtaggactaaaactgcaacaaaaatgataattgaag-ataattttgttctgttttaaaaggacatgaccagtttcgtgagtagaacaa 6018343  T
Q  144 aacacgaggaccaaaagtgtaattaagc 171  Q
    |||||||| ||||||| |||||||||||    
T  6018342 aacacgagaaccaaaaatgtaattaagc 6018315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 14462769 - 14462686
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctg----gagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaa 90  Q
    ||||||||| ||||||||| ||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14462769 ctaaaactgtcatttctctacgtttctgtctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaa 14462686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 24331943 - 24332107
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaa-tgcaacaaaa-atgataattgaaggaccattttgttcta 106  Q
    ||||||||||| ||||||||||||||| |||||  | | ||| || |||||||||||||| |||||||||| |||||||||| |||||| |||||||||     
T  24331943 gtctaaaactgtcatttctctgcgtttttggagaat-agaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcaggaccgttttgttctg 24332041  T
Q  107 tttt-aaaagggcaggactaatttcgtgagtaggccaaaacacgaggacc-aaaagtgtaattaag 170  Q
    |||| |||| |||||||  | ||||||||||| ||||||||| || |||| |||||||||||||||    
T  24332042 ttttaaaaaaggcaggatcagtttcgtgagtatgccaaaacatgatgaccaaaaagtgtaattaag 24332107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 41834443 - 41834606
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccattttgttctat 107  Q
    ||||||||||| ||||||||||||||||  ||||| |||||||||||||||||| |||| ||||| |||| |||||| || | ||||  |||||||| ||    
T  41834443 gtctaaaactgtcatttctctgcgtttcaagagtt-gaaaataggaggtaggactaaaactgcaaaaaaacatgatagttta-ggacggttttgttcgat 41834540  T
Q  108 tttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
     | |||  |||||||| | |||||||||  || |||||  ||||||||||||||||||||||||||    
T  41834541 ctgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcct 41834606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 10721955 - 10721787
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||| | ||||||||| ||||||||| ||||||||||| |||||||||||||||||||| |||| ||||| ||| |||||| ||  ||||| |||||    
T  10721955 ctaaaactgcctaaaactgtcatttctctacgtttctggag-ttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtt-taggacgatttt 10721858  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    |||| |||| |||  | || ||| | |||||||||  || |||||   ||||||||||| |||||||||||    
T  10721857 gttcgatttgaaagagacaagaccattttcgtgagctggtcaaaatgtgaggaccaaaaatgtaattaagc 10721787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 166
Target Start/End: Original strand, 6019189 - 6019309
Alignment:
Q  46 aaaataggaggtaggacgaaaa-atgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaa 144  Q
    ||||| |||||||||||||||| |||||||||||||||||||| || |||  ||||||||| ||||||||| ||| ||  | ||||||||||| ||||||    
T  6019189 aaaatgggaggtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgtgagta-gccaaa 6019287  T
Q  145 acacgaggaccaaaagtgtaat 166  Q
    ||| || |||||||| ||||||    
T  6019288 acatgatgaccaaaaatgtaat 6019309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 28290030 - 28290192
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| ||||||||| ||||     
T  28290030 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 28290128  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||| |  ||||| | |||||||||| || |||||    |||||||||||||||||||||||||    
T  28290129 aaaatgataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 28290192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 28289844 - 28289683
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| || || ||| || |||||| | |||| ||||||||| ||||     
T  28289844 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactggaaaaaacat-ataatttagggacgattttgttcgattta 28289746  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||  || | |||||||||||||||| || |||||  | |||| |||||||||||||||||||    
T  28289745 aaagaggtatgactaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcct 28289683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 159
Target Start/End: Original strand, 4624644 - 4624757
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || ||||||||||||||||||||| |||||||||||||| ||   ||||||| | |||||||  | || ||| |||||||||||||||  ||||    
T  4624644 aaaatggggggtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgtgagtaggttaaaa 4624743  T
Q  146 cacgaggaccaaaa 159  Q
    ||||||||| ||||    
T  4624744 cacgaggacgaaaa 4624757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 15029695 - 15029857
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||||||||||||||||   |||| | | || |||| ||||| ||| || ||| || |||||| ||||||||| ||||     
T  15029695 ctaaaactgtcatttatgtgcgtttctggagtttgaaatagggagatcgaactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 15029793  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||| || | ||| | |||||||||| || |||||   ||||||||||||||||||||||||||    
T  15029794 aaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaagccta 15029857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 27307230 - 27307060
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||| | ||||||||| ||||||| ||||||||||||| |||||||||||||||| ||| |||| ||||| ||| |||||| ||  ||||  |||||    
T  27307230 ctaaaactgcctaaaactgtcatttctatgcgtttctggag-ttgaaaataggaggtaagactaaaactgcaaaaaacatgatagtt-taggatgatttt 27307133  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||| |||| |||    || ||| | |||| | ||| || |||||  |||| |||||||||||||||||||||    
T  27307132 gttcaatttgaaagaaacatgaccattttcataagttggtcaaaatgcgagaaccaaaagtgtaattaagcct 27307060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 32305979 - 32305881
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| |||||||||| |||||||||| ||||||||| |||||||||| |||| ||||| ||| |||||| || | |||| ||||||||| |||    
T  32305979 gtctaaaactgtcatttctctgtgtttctggag-ttgaaaataagaggtaggactaaaactgcaa-aaacatgatagtttagggacgattttgttcgatt 32305882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 16752955 - 16753114
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa--atgataattgaaggaccattttgttctatt 108  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| |||| | |||| ||||| ||||  |||||||||  ||||   ||| |||| |||    
T  16752955 ctaaaactgccatttttctgcgtttctggag-ttgaaaataggagttaggtctaaaactgcaaaaaaaacatgataatt-taggatggtttcgttcgatt 16753052  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    | |||  ||||| || | |||||||||| || |||||  ||| |||||||| ||||||||||    
T  16753053 tgaaagaggcagaaccattttcgtgagttggtcaaaatgcgatgaccaaaaatgtaattaag 16753114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 177
Target Start/End: Complemental strand, 28495003 - 28494839
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    |||||| || || |||||||||||||||||||| |||||||||||||||||| |||| ||||| ||| |||||| ||  |||||  |||||||| ||||     
T  28495003 ctaaaattgtcacttctctgcgtttctggagtt-gaaaataggaggtaggactaaaactgcaaaaaacatgatagtt-taggacagttttgttcgatttg 28494906  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatt 177  Q
    |||  ||||| || | |||| |||   || |||||    |||||||||||||||||||||| |||||    
T  28494905 aaagaggcagaaccattttcctgaactggtcaaaatgtaaggaccaaaagtgtaattaagcttaatt 28494839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 172
Target Start/End: Complemental strand, 19291517 - 19291356
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||| ||||||| ||||  ||||| || ||| |||| ||||| ||||   ||| || |||||| ||||||||| ||||     
T  19291517 ctaaaactgtcatttctgtgcgtttatggagttggaaataaggagataagactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattta 19291418  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||| |  ||||| | ||| |||||| |  ||||| |  |||||||||||||||||||||||    
T  19291417 aaaaagataggaccatttttgtgagttgttcaaaatagtaggaccaaaagtgtaattaagcc 19291356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 181
Target Start/End: Complemental strand, 16752743 - 16752573
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||  ||||||| ||||||| ||||||| |||||||||||||| ||| |||| ||||| ||| || ||| || | |||| ||||||||| |||    
T  16752743 gtctaaaactatcatttctttgcgtttatggagtt-gaaaataggaggtatgacaaaaactgcaaaaaacat-atagtttatggacgattttgttcgatt 16752646  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaattataa 181  Q
    | |||   ||| ||  | |||||||||  || |||||  |  ||||||||||||||||||||||||| |||||    
T  16752645 tgaaagaagcatgatcattttcgtgagctggtcaaaatgcagggaccaaaagtgtaattaagcctaaatataa 16752573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 170
Target Start/End: Complemental strand, 22651505 - 22651347
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||||||||| | ||||||||||||||| ||||||| ||||||||||| |||| ||||| ||| |||||| || |||||   |||||||  ||||    
T  22651505 ctaaaactgccatttttgtgcgtttctggagtt-gaaaataaggaggtaggactaaaactgcaa-aaacatgatagtttaaggatggttttgtttgattt 22651408  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
     |||  |||| ||| | || ||||||  || ||||| ||||| ||||||| ||||||||||    
T  22651407 aaaagaggcatgaccatttccgtgagctggtcaaaatacgagaaccaaaaatgtaattaag 22651347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 28495225 - 28495288
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 73  Q
    ||||||||||  |||||||||||| |||||||| |||||||||||||||||||| |||| |||||    
T  28495225 gtctaaaactatcatttctctgcggttctggag-ttgaaaataggaggtaggactaaaactgcaa 28495288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 8419008 - 8419165
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    ||||| || ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||| ||| || |||||| ||||||||| |||| |    
T  8419008 taaaattgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaa-aaaaat-atagtttaaggacgattttgttcaatttaa 8419105  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    ||| |  ||||| |  ||||||||| || |||||    ||||||||||||||||||||||    
T  8419106 aaaagataggaccatattcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 8419165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 4966897 - 4966819
Alignment:
Q  91 ggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    |||| ||||||||| |||| |||  ||||| |||| |||||||||| || |||||  ||||||||||||||||||||||    
T  4966897 ggacgattttgttcgatttaaaagaggcagtactattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 4966819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 27307443 - 27307499
Alignment:
Q  10 tctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 67  Q
    ||||||| || ||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  27307443 tctaaaaatgtcatttctctgcatttctggag-ttgaaaataggaggtaggactaaaa 27307499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 15115555 - 15115643
Alignment:
Q  89 aaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatt 177  Q
    |||||| ||||||||| |||| |||  || ||||| | |||||||||| || |||||   ||||| |||||||||||||||||||||||    
T  15115555 aaggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggatcaaaagtgtaattaagcctaatt 15115643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 21371082 - 21371245
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || | |||| ||||||||  ||||     
T  21371082 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaacat-atagtttagggacgattttgtttgattta 21371180  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||  || ||||| |||||  ||||| || |||||  | |||| |||||||||||||||||||||    
T  21371181 aaagaggtaggaccaattttatgagttggtcaaaatgcaaggatcaaaagtgtaattaagcctaa 21371245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 13814155 - 13814190
Alignment:
Q  55 ggtaggacgaaaaatgcaacaaaaatgataattgaa 90  Q
    ||||||||||||| ||||||||||||||||||||||    
T  13814155 ggtaggacgaaaagtgcaacaaaaatgataattgaa 13814190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 18150109 - 18150272
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||| | ||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || | |||  ||||||||| ||||     
T  18150109 ctaaaacggtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggatgattttgttcgattta 18150208  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||  || ||||| ||||||||||||  | ||||| || |||| || |||||||||||||||||    
T  18150209 aaagaggtaggaccaatttcgtgagtttgtcaaaatacaaggatcacaagtgtaattaagccta 18150272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 175
Target Start/End: Original strand, 20266333 - 20266464
Alignment:
Q  44 tgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaa 143  Q
    |||||||||| |||||||| |||| | ||||||  |||||| || | |||| ||||||||| |||| |||  | || ||| | |||||| ||  || |||    
T  20266333 tgaaaatagggggtaggactaaaactacaacaaccatgatagtttagggacgattttgttcgatttgaaagagacatgaccattttcgtaagctggtcaa 20266432  T
Q  144 aacacgaggaccaaaagtgtaattaagcctaa 175  Q
    || |||||||||||||||| |||||| |||||    
T  20266433 aatacgaggaccaaaagtgcaattaaacctaa 20266464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 22651776 - 22651859
Alignment:
Q  91 ggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||| ||||||||| |||| |||| ||||| || | |||||||||  || |||||  ||||||| |||||||||||||||||||    
T  22651776 ggacgattttgttcgatttgaaaaaggcagaaccattttcgtgagctggtcaaaatgcgaggacaaaaagtgtaattaagccta 22651859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 5501739 - 5501772
Alignment:
Q  173 taattataaacactcagacactcaagtcaatatg 206  Q
    |||||||||||||||| |||||||||||||||||    
T  5501739 taattataaacactcatacactcaagtcaatatg 5501772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 38900784 - 38900648
Alignment:
Q  31 cgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttc 130  Q
    ||||| ||||||| ||||   |||| |||||| |||| ||||| ||| || |||||| | |||| ||||||||| |||| |||  || ||||  | ||||    
T  38900784 cgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-ataatttagggacgattttgttcgatttaaaagaggtaggatcattttc 38900686  T
Q  131 gtgagtaggccaaaacacgaggaccaaaagtgtaatta 168  Q
    |||||| || |||||  |||||||||||||||||||||    
T  38900685 gtgagttggtcaaaatgcgaggaccaaaagtgtaatta 38900648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 4967294 - 4967326
Alignment:
Q  149 gaggaccaaaagtgtaattaagcctaattataa 181  Q
    ||||||||||||||||||||||||||| |||||    
T  4967294 gaggaccaaaagtgtaattaagcctaaatataa 4967326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 5e-77; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 5137355 - 5137532
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  5137355 ctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataattgaaggaccatttt 5137454  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatta 178  Q
    |||||||||||||||||||| || | |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5137455 gttctattttaaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatta 5137532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 39555749 - 39555577
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39555749 ctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccatttt 39555650  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||| |||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  39555649 gttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39555577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 25853405 - 25853234
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  25853405 ctaaaaccgcctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 25853306  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25853305 gttctattttaaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25853234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20840935 - 20841107
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20840935 ctaaaaccgcctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 20841034  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||| |||||||| |||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||    
T  20841035 gttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagcct 20841107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 37727304 - 37727475
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37727304 ctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 37727403  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||| ||||||||| ||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||    
T  37727404 gttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 37727475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 4275738 - 4275911
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  4275738 ctaaaaccgcctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgtttt 4275837  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||| ||||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4275838 gttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 4275911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 29801790 - 29801969
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  29801790 ctaaaaccgtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaagaccgtttt 29801889  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaattata 180  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||    
T  29801890 gttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagcctaaatata 29801969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 30098137 - 30098309
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30098137 ctaaaaccgcctaaaactgtcatatctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 30098236  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||| ||||||||||||| ||| | ||||||||||| | |||||||||||||||||||||||||||||||||    
T  30098237 gttctgttttaaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 30098309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31778824 - 31778652
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||    
T  31778824 ctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataaacgaaggaccgtttt 31778725  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||| ||||||||||||||||| | |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  31778724 gttctgttttaaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaagcct 31778652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 43973814 - 43973988
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||| | ||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  43973814 ctaaaactgcctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgtttt 43973913  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| |||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43973914 gttctgttttaaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 43973988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 17464662 - 17464487
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    |||| |||| ||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17464662 ctaacaccgcctaaaactgtcatttctttacgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 17464563  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    ||||| ||||||||||||| ||| | ||||| || |||||||||||||||||||||||||||||||||||||||||    
T  17464562 gttctgttttaaaagggcatgaccagtttcgcgaataggccaaaacacgaggaccaaaagtgtaattaagcctaat 17464487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 23644839 - 23645010
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||    
T  23644839 ctaaaaccgcctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgtttt 23644938  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23644939 gttctgttttaaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 23645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 32535129 - 32534962
Alignment:
Q  2 taaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttg 101  Q
    |||||||| ||||||||| |||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32535129 taaaaccgcctaaaactgtcatttctctgtgattctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 32535030  T
Q  102 ttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    |||| |||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  32535029 ttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 26837531 - 26837358
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  26837531 ctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttc 26837432  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||| | || |||||||||||||| ||||||||||||||||||||| || |||||||||| ||||||||| ||||    
T  26837431 gttatgttataaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaaaccta 26837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 27393832 - 27393660
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||| | ||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  27393832 ctaaaactgcctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 27393733  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||| |||||||| |||||||| | ||| ||||||||| |||||||||||||||||||||||||||||||||    
T  27393732 gttctgttttaaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 27393660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 22424985 - 22424811
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22424985 ctaaaaccgcctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 22424886  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| |||||||||| ||| || | |||||| |||||||  ||||||||| |||||||||||||||||||||||    
T  22424885 gttctgttttaaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaagcctaa 22424811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 39555960 - 39556122
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  39555960 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacgaaaatgataattgaaggaccattttgttctgtt 39556058  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  39556059 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39556122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 20840722 - 20840557
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| |||||||||||||||  ||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20840722 gtctaaaactgtcatttctctgcgtttaaggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatt 20840624  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20840623 ttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 20840557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 174
Target Start/End: Original strand, 31779034 - 31779199
Alignment:
Q  8 cgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctat 107  Q
    |||||||||||| ||||||||||||||| |||||  | ||||| || ||| ||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  31779034 cgtctaaaactgacatttctctgcgtttttggagaat-aaaatggggggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgt 31779132  T
Q  108 tttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31779133 tttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 31779199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 5137142 - 5136978
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  5137142 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 5137044  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  5137043 ttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaaaccta 5136978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 26274738 - 26274570
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||| | ||||||||| |||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  26274738 ctaaaactgcctaaaactgtcatttaactgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 26274639  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||| ||||||||||||||||| | |||||||||||| |||||| || |||| ||||| |||||||||    
T  26274638 gttctgttttaaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaattaa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 41047073 - 41047239
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  41047073 ctaaaaccgcctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga-cgtttt 41047171  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
     |||| |||||||||| ||| || | ||||||||||||||||||||| || || | |||||||||||||    
T  41047172 attctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacatgaaga-cgaaagtgtaattaa 41047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 24300939 - 24301104
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| | |||||||| ||||||| | ||    
T  24300939 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggaccgttttgttttgtt 24301037  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24301038 ttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 24301104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 24300727 - 24300560
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||| ||||    
T  24300727 ctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataattgaagaaccgtttt 24300628  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
     |||| |||||||||| |||||| | |||||||| || |||||||||||| |||||||| |||||||||    
T  24300627 attctgttttaaaaggacaggaccagtttcgtgaataagccaaaacacga-gaccaaaaatgtaattaa 24300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 179
Target Start/End: Complemental strand, 48453144 - 48452982
Alignment:
Q  16 actgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaag 115  Q
    |||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||     
T  48453144 actgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaat 48453046  T
Q  116 ggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaattat 179  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  48453045 ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatcaagcctaattat 48452982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 23644624 - 23644461
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||   |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||    
T  23644624 gtctaaaactattatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttctgtt 23644526  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23644525 ttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 23644461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 41046862 - 41046703
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  41046862 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 41046764  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||||||||| ||| | |||||| | ||||||||||||||||||||||||||||||||||    
T  41046763 ttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 27393960 - 27394123
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || ||||||| | ||||||||||||||||||||||||||||| | ||||||||| ||    
T  27393960 gtctaaaactgttatttctctgcgtttttggagaat-aaaattgggggtaggatggaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtt 27394058  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27394059 ttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 27394123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 37727091 - 37726928
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||    
T  37727091 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtt 37726993  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||||||||||| || | |||||| || || ||||||||||||||||||||||||||||||||||    
T  37726992 ttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaagcct 37726928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 30104643 - 30104479
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| | ||   | ||||| || ||||||||||||||||||||||||||||||||||||||||| || | || | ||    
T  30104643 gtctaaaactgtcatttctctgcgtttttagataat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttctattttgtt 30104546  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30104545 ttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctaa 30104479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 32535342 - 32535508
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaat-----gataattgaaggaccattttgtt 103  Q
    ||||||||||  ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||     ||||||||||||||| |||||||    
T  32535342 gtctaaaactatcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgcaacaaaaatttaatgataattgaaggaccgttttgtt 32535439  T
Q  104 ctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    || ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  32535440 ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 32535508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 25612396 - 25612519
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || ||||||||||||||||||||||||||||||||| || |||  ||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  25612396 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttcgtgagtaggtcaaaa 25612495  T
Q  146 cacgaggaccaaaagtgtaattaa 169  Q
    ||||||||||||||||||||||||    
T  25612496 cacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 43973603 - 43973441
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||| ||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  43973603 gtctaaaactgttatttatctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 43973505  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||||||||||  |  | ||||||||||||| ||||||||||||||||||||||||||||||||    
T  43973504 ttaaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagcc 43973441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 26837739 - 26837903
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||| ||| |||||  | ||||| || |||||||| ||||||||||||||||||||| ||||| |||| ||||||||||||    
T  26837739 gtctaaaactgtcatttctctgcatttttggagaat-aaaatggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgaccgttttgttctatt 26837837  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| |||||| || | |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26837838 ttaaa-gggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 26837903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 25853610 - 25853770
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25853610 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtt 25853708  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    |||||| | || ||| | ||||||||||||  ||||||||||||| ||||||||||||||||    
T  25853709 ttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaag 25853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 32697128 - 32697244
Alignment:
Q  55 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggac 154  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||  |||||||||||||||||||| |||||||||||||    
T  32697128 ggtaggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcgtgagtaggctaaaacacgaggac 32697227  T
Q  155 caaaagtgtaattaagc 171  Q
    ||||| | |||||||||    
T  32697228 caaaaatataattaagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 17464874 - 17465044
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa-atgcaacaaaaatgataattgaaggaccattttgttctat 107  Q
    ||||||||||| ||||||||||| ||| |||||  | ||||| || |||||||| |||| |||||||||||||||||||||||||||| |||||||||||    
T  17464874 gtctaaaactgtcatttctctgcatttttggagaat-aaaatggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctat 17464972  T
Q  108 tttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaattat 179  Q
    ||||||||||   ||| | |||| || ||||||||||||||||||||||||| ||||||||||||| |||||    
T  17464973 tttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagccttattat 17465044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 168
Target Start/End: Original strand, 22425209 - 22425354
Alignment:
Q  22 atttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcagg 121  Q
    |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||| ||||||| |    
T  22425209 atttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagtaccgttttgttctgttttacaagggcatg 22425307  T
Q  122 actaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaatta 168  Q
    || |  |||||||||||||| ||||||||||||||||||||||||||    
T  22425308 accagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 23228427 - 23228552
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||  ||||||||||||| ||  | |||||||||||||||||||    
T  23228427 aaaatgggaggtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgttc-gttttaaaagggcatgatcattttcgtgagtaggccaaaa 23228525  T
Q  146 cacgaggaccaaaagtgtaattaagcc 172  Q
    |||| ||||||||||||||||||||||    
T  23228526 cacggggaccaaaagtgtaattaagcc 23228552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 29801473 - 29801356
Alignment:
Q  55 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggac 154  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| | ||| ||||||| |||||||||||| |||    
T  29801473 ggtaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacgatgac 29801374  T
Q  155 caaaagtgtaattaagcc 172  Q
    ||||||||||||||||||    
T  29801373 caaaagtgtaattaagcc 29801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 51474753 - 51474882
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || ||||||||||||||||||||||||||||||| | |||||| |||||||| | ||||||||||||| ||| ||||||||||||| |||||||    
T  51474753 aaaattgggggtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaatttcgtgagtatgccaaaa 51474852  T
Q  146 cacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||| | |||||||||||||||||||||||    
T  51474853 cacgggaaccaaaagtgtaattaagcctaa 51474882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 51473542 - 51473429
Alignment:
Q  58 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaa 157  Q
    ||||| |||| |||||||||||||||||  ||||||| |||||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  51473542 aggaccaaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaa 51473443  T
Q  158 aagtgtaattaagc 171  Q
    ||||||||||||||    
T  51473442 aagtgtaattaagc 51473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 50116828 - 50116954
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || ||||||||||||| ||||||||||||||||| |||| |||| ||||||||| ||| ||||||||| ||| ||||||||||||| | |||||    
T  50116828 aaaatggggggtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaatttcgtgagtaagtcaaaa 50116927  T
Q  146 cacgaggaccaaaagtgtaattaagcc 172  Q
    |||||||| ||||||||||||||||||    
T  50116928 cacgaggatcaaaagtgtaattaagcc 50116954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 61 - 174
Target Start/End: Complemental strand, 45966049 - 45965936
Alignment:
Q  61 acgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaag 160  Q
    ||||||||||||||| |||||||||| |||||||  ||||||| | ||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||    
T  45966049 acgaaaaatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtgagtatgccaaaacacgaggaccaaaag 45965950  T
Q  161 tgtaattaagccta 174  Q
    ||||||||||||||    
T  45965949 tgtaattaagccta 45965936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 26274950 - 26275114
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| |||||||||||| || |||||  | ||||| || |||||||||||||| |||||||||||||||||||| ||||| |||| |||| ||    
T  26274950 gtctaaaactgtcatttctctgcggttttggagaat-aaaatggggggtaggacgaaaaa-gcaacaaaaatgataattgagggaccgttttattctgtt 26275047  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||||||| ||||| | ||||||||||||| |||||||| ||| |||||| | ||||||| |||||    
T  26275048 ttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaattataattaaacctaa 26275114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 25420560 - 25420684
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || |||| ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||  ||  ||||||||||||||| |||||    
T  25420560 aaaatggggggtatgacgaaaaatgcaacaaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaatttcgtgagtaggtcaaaa 25420659  T
Q  146 cacgaggaccaaaagtgtaattaag 170  Q
     |||| || ||||||||||||||||    
T  25420660 tacgatgatcaaaagtgtaattaag 25420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 37220674 - 37220555
Alignment:
Q  55 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggac 154  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||||| |||| ||||||||| ||| ||   || | ||||||||||||||| ||||||||    
T  37220674 ggtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatattgtgagtaggccaaaatacgaggac 37220575  T
Q  155 caaaagtgtaattaagccta 174  Q
    ||||||||||||||||||||    
T  37220574 caaaagtgtaattaagccta 37220555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 37222041 - 37222118
Alignment:
Q  97 ttttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||| |||||||| |||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  37222041 ttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagccta 37222118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 36701480 - 36701646
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||||||||||| || |||||||||||| |||||||||||||| ||| |||| ||||| ||| |||||| || | |||  ||||||||| |||    
T  36701480 gtctaaaactgccatttctatgtgtttctggagtt-gaaaataggaggtatgactaaaactgcaaaaaacatgatagtttagggatgattttgttcgatt 36701578  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    | |||  | || ||| | |||||||||  || |||||  ||||||||||||||||||||||| |||||    
T  36701579 tgaaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagtctaat 36701646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 171
Target Start/End: Complemental strand, 25419242 - 25419145
Alignment:
Q  75 aaaaatgataattgaa-ggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    |||||||||||||||| ||||  ||||||||| |||||||||||||| |||||||||||||||| || ||||||||| |||||||||| |||| ||||    
T  25419242 aaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaatttcgtgagtaagctaaaacacgaagaccaaaagtataatcaagc 25419145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 18010176 - 18010271
Alignment:
Q  58 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgagga 153  Q
    |||||||||||||||||||||||||||||||||  || |||||||||| |||||||||||| | || | |||||||||||| | |||||| |||||    
T  18010176 aggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagtagacgaaaacaggagga 18010271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 27200076 - 27200241
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||| ||| ||||||||||||||||||||| |||||||||||||||| ||| |||| ||||| ||| |||||| ||  |||||  | |||||| |||    
T  27200076 gtctaaacctgtcatttctctgcgtttctggag-ttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtt-taggacggtattgttcgatt 27200173  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    | |||  ||||| || | |||||||||  || |||||  | |||||||||||||||||||||||||||    
T  27200174 tgaaagaggcagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagcctaat 27200241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 51828117 - 51827956
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||| | ||||||||||||||| ||||||||| || |||||| |||||||||| ||| || ||| || | |||| ||||||||| ||||    
T  51828117 ctaaaactgtcatttatgtgcgtttctggagtt-gaaaatagggagataggactaaaaatgcaaaaaacat-atagtttagggacgattttgttcgattt 51828020  T
Q  110 taaaagggc-aggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
     ||||| || ||||| |||||||||||| || |||||  | ||||||||||||||||||||||||    
T  51828019 -aaaagagctaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 51827956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 55389765 - 55389603
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| ||||||||| ||||     
T  55389765 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 55389667  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||| || ||||| | |||||||||| || | |||   |||||||||||||||||||| |||||    
T  55389666 aaaaaggtaggaccattttcgtgagttggtcgaaatgggaggaccaaaagtgtaattatgccta 55389603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 37076050 - 37076219
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||| | ||||||||||||||||||| ||||||| |||||  ||||||| ||||| ||| ||||||| || ||| |||||| ||  ||||| |||||    
T  37076050 ctaaaactgcctaaaactgccatttctctacgtttctagagttaaaaaatagaaggtaagactaaaaatgtaaaaaacatgatagtt-taggacgatttt 37076148  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    |||| |||| |||  ||| |||| | |||||||||  |  |||||  |||||||||||| |||||||||||    
T  37076149 gttcgatttgaaagaggcgggaccattttcgtgagctgatcaaaatgcgaggaccaaaaatgtaattaagc 37076219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 181
Target Start/End: Complemental strand, 49720531 - 49720362
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||||||||||| ||||  ||||| |||||| |||| ||||| |||  | ||| || | |||| ||||||||| ||||     
T  49720531 ctaaaactgtcatttatgtgcgtttctggagttagaaataaggagataggactaaaactgcaaaaaacgt-atactttagggacgattttgttcgattta 49720433  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaattataa 181  Q
    |||  || ||||| |||||||||||| || |||||  | |||| |||||||||||||||||||| ||||||    
T  49720432 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcctagttataa 49720362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 175
Target Start/End: Original strand, 50900913 - 50901076
Alignment:
Q  10 tctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||||| |||||| ||||||| ||||||| |||||||||||||||||| |||| ||||| ||| || ||| || | ||||  |||||||| ||||    
T  50900913 tctaaaactgcaatttctttgcgtttatggagtt-gaaaataggaggtaggacaaaaactgcaaaaaacat-atagtttagggacggttttgttcgattt 50901010  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
      ||  |||||| | | ||| |||||  || |||||  ||||||||||||||||||||||||||||    
T  50901011 gtaagaggcagggccatttttgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcctaa 50901076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 176
Target Start/End: Original strand, 52237203 - 52237367
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| |||||||| |||||| ||||   |||| |||||| |||| ||||| ||| || |||||| | |||| ||||||||| ||||     
T  52237203 ctaaaactgtcatttctgtgcgtttccggagttagaaatagggagataggactaaaactgcaaaaaacat-ataatttagggacgattttgttcgattta 52237301  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    |||  || ||||| | |||||||||| || |||||   |||||||||||||||||||||| |||||    
T  52237302 aaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaaggctaat 52237367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 169
Target Start/End: Complemental strand, 32695817 - 32695706
Alignment:
Q  58 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaa 157  Q
    ||||| |||| |||||||||||| ||||| | ||||| |||||||||| |||||||| | ||  |  |||||||| |||||||||||| | |||||||||    
T  32695817 aggactaaaattgcaacaaaaataataatcgtaggacaattttgttctgttttaaaaagacataatcaatttcgtaagtaggccaaaatatgaggaccaa 32695718  T
Q  158 aagtgtaattaa 169  Q
    || |||||||||    
T  32695717 aaatgtaattaa 32695706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 177
Target Start/End: Original strand, 52375717 - 52375882
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggagg-taggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||||| ||||||||||||||| |||| |||| |  || ||| |||| ||||| ||| || ||| || | |||| ||||||||| ||||    
T  52375717 ctaaaactgtcatttctgtgcgtttctggagttggaaa-taggggaatatgactaaaactgcaaaaaacat-atagtttatggacgattttgttcaattt 52375814  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatt 177  Q
     |||  || ||||| | |||||||||| || |||||  ||||||||||||||||||||||||||||||    
T  52375815 aaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcctaatt 52375882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 49407957 - 49407793
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||| || ||||||||||||||| ||||||| |||||||||||||| ||| |||| || |  ||| || | | || | ||||  ||||||||||||    
T  49407957 gtctaaaattgtcatttctctgcgtttttggagtt-gaaaataggaggtatgactaaaactgtacaaaacataa-agtttagggacggttttgttctatt 49407860  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    | |||  |||| ||| | |||||||||  || |||||  ||||||||||||||||||||||||||||    
T  49407859 tgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcctaa 49407793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 55192279 - 55192222
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaa 67  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||    
T  55192279 gtctaaaactgtcatttctctgcgtttctggag-ttgaaaataggaggtaggactaaaa 55192222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 47431857 - 47431694
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || || ||| ||||||||| ||||     
T  47431857 ctaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaacatatagtttaaagacgattttgttcgattta 47431758  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||  || | ||| | |||||||||| || |||||    |||||||||||||||||||||||||    
T  47431757 aaagaggtatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 47431694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 22370757 - 22370599
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    |||||||||  |||||| ||||||||||||||| || |  ||||| |||||| |||| ||||| ||||   ||| || | |||| ||||||||   |||     
T  22370757 ctaaaactgttatttctgtgcgtttctggagttggagataaggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgtttggttta 22370658  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    |||| || ||||| | |||||||||| || |||||  ||||||||||||||||||||||    
T  22370657 aaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 22370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 37075850 - 37075781
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 79  Q
    ||||||||| | ||||||||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||    
T  37075850 gtctaaaacggtcatttctctgcgtttctggag-ttgaaaataagaggtaggactaaaactgcaaaaaaaa 37075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 172
Target Start/End: Complemental strand, 40275255 - 40275093
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatg-ataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||   | | || | |||| ||||||||| ||||    
T  40275255 ctaaaactgtcatttctgtgcgtttctggagttagaaatatggagataggactaaaactgcaaaaaaaacatagagtttagggacaattttgttcgattt 40275156  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
     |||  || ||||| | |||||||||| || |||||   ||||||||||||||||||||||||    
T  40275155 aaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagcc 40275093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 172
Target Start/End: Original strand, 50662798 - 50662958
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaata-ggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| |||| |||||| |||| ||||| ||| || ||| || |||||| ||||||||| ||||    
T  50662798 ctaaaactgtcatttctgtgcgtttctggag-ttgaaaatagggagctaggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 50662895  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
     |||| |  | ||||| ||||||||||  | |||||    |||||||||||| ||||||||||    
T  50662896 aaaaaagatatgactattttcgtgagtttgtcaaaatggtaggaccaaaagtataattaagcc 50662958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 330223 - 330383
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    |||||||| ||||||| ||||||||| ||||| ||||   |||| || ||| |||| ||||| ||| || ||| || | |||| ||||||||  |||| |    
T  330223 taaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaacat-atagtttagggacgattttgtttgatttaa 330321  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||| || ||||| | |||||||||| || |||||  ||||||||||| ||||||||||||||    
T  330322 aaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaatgtgtaattaagcct 330383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 14654577 - 14654736
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||||||||||| ||||  ||||| |||||| |||| ||||| ||| ||   | || | |||| ||||||||| ||||     
T  14654577 ctaaaactgtcatttatgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaaacat---agtttacggacgattttgttcgattta 14654673  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||  || ||  | |||||||||||| || |||||  | ||||||||||||||||||||||||    
T  14654674 aaagaggtagagccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 14654736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 49408167 - 49408326
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-atgataattgaaggaccattttgttctat 107  Q
    ||||||||||||||||||| ||||||||||||| ||||||||  |||||||||| |||| ||||| |||| |||||| ||  |||||  |||||||| ||    
T  49408167 gtctaaaactgccatttctttgcgtttctggag-ttgaaaat--gaggtaggactaaaactgcaaaaaaacatgatagtt-taggacagttttgttcgat 49408262  T
Q  108 tttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    || |||  | ||  || | |||||||||  || |||||  |||| |||||||||||||||||||    
T  49408263 ttgaaagagacacaaccattttcgtgagatggtcaaaatgcgagtaccaaaagtgtaattaagc 49408326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 8873850 - 8873784
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa 78  Q
    ||||||||| |||||||||||||||||| || |||||||||||||||| ||| |||| ||||| ||||    
T  8873850 ctaaaactgtcatttctctgcgtttctgaag-ttgaaaataggaggtaagactaaaactgcaaaaaaa 8873784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 25535051 - 25534889
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagg-accattttgttctattt 109  Q
    ||||||||| ||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || |||||| | || || ||||||||| ||||    
T  25535051 ctaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-ataatttaggggacgattttgttcgattt 25534953  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
     |||  || ||||| | |||| ||| | || |||||  ||||||||||||||||||||||||||    
T  25534952 aaaagaggtaggaccattttcatgaattggtcaaaatgcgaggaccaaaagtgtaattaagcct 25534889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 44676858 - 44677015
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaatag-gaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||| | ||||||||||||| |||||||||| ||| |||||| |||| ||||| ||| || ||| || |||||| ||||||||| ||||    
T  44676858 ctaaaactgtcatttatgtgcgtttctggag-ttgaaaatagagagataggactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattt 44676955  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
     |||| |  | ||| | |||||||||| || |||||    ||||||||||||||||||||    
T  44676956 aaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 44677015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 40839038 - 40839195
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || | |||| ||||||||| ||||     
T  40839038 ctaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattta 40839136  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    |||  || | ||| | ||||||||||  | |||||   |||||||||||||||||||||    
T  40839137 aaagaggtaagaccattttcgtgagtttgtcaaaatgtgaggaccaaaagtgtaattaa 40839195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 172
Target Start/End: Original strand, 49951932 - 49952092
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||| | ||||||||||||||| ||||||||| || || ||| |||| ||||| ||| ||| || || || ||| ||||||||| ||||    
T  49951932 ctaaaactgtcatttatgtgcgtttctggagtt-gaaaatagggagatatgactaaaactgcaaaaaacatg-tagtttaatgacgattttgttcgattt 49952029  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
     |||  || | ||| |||||||||||| || |||||  | |||||||||| ||||||||||||    
T  49952030 aaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagcc 49952092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 51828700 - 51828538
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || | |||| ||||||||| ||||     
T  51828700 ctaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttacggacgattttgttcgattta 51828601  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||  || | ||| |||||||| | | || |||||  | ||||||||||||||||||||||||    
T  51828600 aaagaggtaagaccaatttcgtaatttggtcaaaatgcaaggaccaaaagtgtaattaagcct 51828538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 2323538 - 2323466
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 84  Q
    ||||||||| ||||| || | |||||||||||| |||||||||||||||||| |||| ||||| ||| ||||||    
T  2323538 ctaaaactgtcatttatccgtgtttctggagtt-gaaaataggaggtaggactaaaattgcaaaaaacatgata 2323466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 172
Target Start/End: Original strand, 51828343 - 51828504
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| ||||||||| ||||     
T  51828343 ctaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacaattttgttcgattta 51828442  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||    | ||| | |||||||||| || ||||     |||||||||||||||||||||||    
T  51828443 aaaaatatatgaccattttcgtgagttggtcaaagtggtaggaccaaaagtgtaattaagcc 51828504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 173
Target Start/End: Complemental strand, 23227370 - 23227261
Alignment:
Q  58 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaa 157  Q
    ||||||||||||||||||||||||| ||||| ||||| | |||||||| ||| |       ||||| | ||||||||||| ||||||||||   ||||||    
T  23227370 aggacgaaaaatgcaacaaaaatgaaaattggaggacaaatttgttctgtttca------gaggaccattttcgtgagtaagccaaaacacagagaccaa 23227277  T
Q  158 aagtgtaattaagcct 173  Q
    |||| ||||| |||||    
T  23227276 aagtctaattgagcct 23227261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 38535469 - 38535306
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||| ||||||| ||||   |||| ||||||  ||| ||||| ||| || ||| || |||||| ||||||||| ||||     
T  38535469 ctaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactgaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 38535371  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||| |  ||||| | |||| ||||| || |||||    ||||||||||||||||||||||||||    
T  38535370 aaaaagataggaccattttcctgagttggtcaaaatggtaggaccaaaagtgtaattaagcctaa 38535306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 32730775 - 32730877
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||||||||||||||||   |||| |||||  |||| ||||| ||| || ||| || |||||| ||||||||| ||||     
T  32730775 ctaaaactgtcatttctgtgcgtttctggagtttgaaatagggagataggattaaaactgcaaaaaacat-atagtttaaggacgattttgttcaattta 32730873  T
Q  111 aaaa 114  Q
    ||||    
T  32730874 aaaa 32730877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 174
Target Start/End: Complemental strand, 41998390 - 41998227
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| | ||||| ||||||| ||||   |||| || ||| |||| ||||| ||||   ||| || |||||| ||||||||| ||||     
T  41998390 ctaaaactgtcatttctgttcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattta 41998291  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||| |  ||||| | ||||| |||| || |||||    |||||||||||||||||||||||||    
T  41998290 aaaaagataggaccattttcgcgagttggtcaaaatggtaggaccaaaagtgtaattaagccta 41998227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 46013582 - 46013421
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    ||||||| | ||||| | ||||||||||||||| ||||||||| || || ||| |||| ||||| ||| || ||| || | |||| ||||||||| ||||    
T  46013582 ctaaaaccgtcatttatgtgcgtttctggagtt-gaaaatagggagatatgactaaaactgcaaaaaacat-atactttagggacgattttgttcgattt 46013485  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
     |||  || | ||| |||||||||||| || |||||  | |||| |||||||||||||||||||    
T  46013484 aaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagcct 46013421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 25611529 - 25611491
Alignment:
Q  141 caaaacacgaggaccaaaagtgtaattaagcctaattat 179  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  25611529 caaaacacgaggatcaaaagtgtaattaagccttattat 25611491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 41998693 - 41998775
Alignment:
Q  91 ggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||| ||||||||| |||| |||  || ||||| |||||||| ||| || |||||  | ||||||||||||||||||||||||    
T  41998693 ggacgattttgttcgatttaaaagaggtaggaccaatttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 41998775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 169
Target Start/End: Complemental strand, 49951706 - 49951549
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    |||||||||  |||| | ||||||| ||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||| ||||||||| ||||     
T  49951706 ctaaaactgttatttatgtgcgtttatggagttggaaatagggagataggactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattta 49951608  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    |||| |  ||||| | |||||||||| || |||||    ||||||||||||||||||||    
T  49951607 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 49951549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 51473015 - 51472854
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| ||||||| ||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || | |||| ||||||||  ||||     
T  51473015 ctaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-atactttagggacaattttgtttgattta 51472917  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||  || ||||  |||||| ||||| || |||||  | |||||||||||| |||||||||||    
T  51472916 aaagaggtaggaaaaatttcatgagttggtcaaaatgcaaggaccaaaagtataattaagcct 51472854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 51473241 - 51473399
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||| ||||||| ||||   |||| |||||| |||| ||||| ||||   ||| || |||||| ||||||||| ||||     
T  51473241 ctaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattta 51473340  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    |||| |  ||||| | |||||||||| || |||||    |||| |||||||||||||||    
T  51473341 aaaaagataggaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 51473399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 172
Target Start/End: Complemental strand, 43222550 - 43222390
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | | |||||||||||||  |||||||| |||||||  |||||||||| ||| || ||| || | |||| ||||||||| ||||     
T  43222550 ctaaaactgtcatttttgtacgtttctggagttgaaaaatagggggtaggattaaaaatgcaaaaaacat-atagtttagggacgattttgttcgattta 43222452  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||  | ||  |||| |||||||||| || |||||   || ||||||||  |||||||||||    
T  43222451 aaagagacataactattttcgtgagttggtcaaaatgtgatgaccaaaaacgtaattaagcc 43222390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 37847204 - 37847267
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaa 73  Q
    |||||||| || ||||||||||| |||||| || ||||||||||||| |||||| |||| |||||    
T  37847204 gtctaaaattgtcatttctctgcatttctgaag-ttgaaaataggagataggactaaaactgcaa 37847267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 40275593 - 40275645
Alignment:
Q  126 atttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatta 178  Q
    ||||||||||| || |||||   |||||||||||||||||||||||| |||||    
T  40275593 atttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagccaaatta 40275645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 173
Target Start/End: Original strand, 49720824 - 49720908
Alignment:
Q  89 aaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||||| ||||||||| |||| |||| |  | ||| | |||||||||| || ||||| |  ||||||||||||||||||||||||    
T  49720824 aaggacgattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagcct 49720908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 145; Significance: 2e-76; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 18984493 - 18984665
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18984493 ctaaaaccgcctaaaactgccatttctctgtgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 18984592  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18984593 gttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaagcct 18984665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 5539987 - 5539817
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  5539987 ctaaaaccgcctaaaactgccatttctatgcgtttatggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgtttt 5539888  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5539887 gttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 17433589 - 17433758
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17433589 ctaaaaccgtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 17433688  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    ||||| ||||||||||||| ||| | |||||||||||||||| |||||||||||||||||||||||||||    
T  17433689 gttctgttttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaag 17433758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 39154394 - 39154566
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39154394 ctaaaaccgcctaaaattgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 39154493  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||| | ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  39154494 gttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39154566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 29307324 - 29307487
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  29307324 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 29307423  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||||||||||||| | ||||||||||||| |||||||||||||||||||||| |||||||||    
T  29307424 ttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagcc 29307487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 15173468 - 15173645
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15173468 ctaaaaccgcctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 15173567  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaattat 179  Q
    ||||| |||||||| |||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15173568 gttctgttttaaaa-ggcaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctatttat 15173645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 50970449 - 50970276
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| | ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  50970449 ctaaaaccgccaaaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 50970350  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||||  |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50970349 gttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 50970276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 29869993 - 29870164
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29869993 ctaaaaccgcctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 29870092  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||| |||||||| |||||||| | |||| |||||||||||||||||||||||||||||||||||||||||    
T  29870093 gttctgttttaaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 29870164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 8678712 - 8678542
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  8678712 ctaaaaccgcctaaaactgtcatttctttgcgtttctgaagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 8678613  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    ||| | ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  8678612 gttttgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 8678542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 21856213 - 21856039
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||    
T  21856213 ctaaaaccgcctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataattgaaggaccgtttt 21856114  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| ||||||||||||||||| | ||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  21856113 gttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagtctaa 21856039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 15646363 - 15646190
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15646363 ctaaaaccgcctaaaactgtcatttctctgcatttatggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataattgaagtaccatttt 15646264  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||| ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15646263 gttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagccta 15646190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 33144088 - 33143925
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  33144088 ctaaaaccgcctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaaaaaaaatgataattgaaggaccgtttt 33143989  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgta 164  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  33143988 gttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 4636356 - 4636515
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttta 111  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| |||||    
T  4636356 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtttta 4636455  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    |||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||    
T  4636456 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4636515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 26859230 - 26859059
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||   | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26859230 ctaaaaccgcctaaaactattacttctctgcgtttctggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 26859131  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||| |||||||| |||||||| | |||||| ||||||||||||||| |||||||||||||||||||||||    
T  26859130 gttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggaccaaaagtgtaattaagcc 26859059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 9019345 - 9019511
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||    
T  9019345 gtctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 9019444  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||||| ||||| || | ||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  9019445 ttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctaa 9019511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 15173258 - 15173099
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||| |||    
T  15173258 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttcaatt 15173160  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15173159 ttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 50970661 - 50970824
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  50970661 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 50970759  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||    
T  50970760 ttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 50970824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 18984281 - 18984117
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||  ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  18984281 gtctaaaactatcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 18984183  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||    
T  18984182 ttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagccta 18984117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 33144302 - 33144462
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| ||||||| |||||||||||| ||    
T  33144302 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggtccattttgttctgtt 33144400  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  33144401 ttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 5540201 - 5540364
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| |||| |||| ||    
T  5540201 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttcttctgtt 5540299  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  5540300 ttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 5540364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 15646578 - 15646741
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  15646578 gtctaaaactgtcatttctctgcgtttttggagaat-aaaattgggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 15646676  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||||| ||||  | |||||||||||||||||||||||||||||||||||||||||||||||    
T  15646677 ttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15646741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 5962748 - 5962579
Alignment:
Q  2 taaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttg 101  Q
    |||||||| ||||||||| |||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||| |||||    
T  5962748 taaaaccgcctaaaactgtcattactctgtgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgatagttgaaagaccgttttg 5962649  T
Q  102 ttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    |||| |||||||||||| |||| | |||||||| ||| ||| |||||||||||||||| |||||||||||    
T  5962648 ttctgttttaaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaattaagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 8678925 - 8679086
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||| ||| |||||  | ||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||    
T  8678925 gtctaaaactgtcatttctctgcatttttggagaat-aaaat-ggaggtaggacgaaaaatgcaacaaaaatgataattgaatgacctttttgttctgtt 8679022  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||    
T  8679023 ttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8679086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 17112452 - 17112282
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  17112452 ctaaaaccgcctaaaactatcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaataaaaatgataattgaaggactatttt 17112353  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
     |||||||||||||||||   || |||||| |||||||  ||||||| ||| ||||||||||||||||||||    
T  17112352 attctattttaaaagggc-ctaccaatttcatgagtagatcaaaacatgagaaccaaaagtgtaattaagcc 17112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 29307115 - 29306953
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  29307115 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 29307017  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||||||| || ||| | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  29307016 ttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 29306953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 5962961 - 5963120
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||  ||||||||||||    
T  5962961 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaagactgttttgttctatt 5963059  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||||||||| ||  | |||||||||||||||||||||||||||||||||||||||||||    
T  5963060 ttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 29869782 - 29869619
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| ||  ||||||||||||||||||||||||| |||||||||||||| ||||||||| ||    
T  29869782 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggtgtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgtt 29869684  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||||||| ||| | ||||||||||| |||||||||||||||||||||||||||||||||||    
T  29869683 ttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcct 29869619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 26859443 - 26859606
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||   |||||||||||||| |||||  |  |||| || ||||||||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  26859443 gtctaaaactattatttctctgcgtttttggagaat--aaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtattgttctgtt 26859540  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    |||||||||||||| || |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  26859541 ttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaagccta 26859606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 9019122 - 9018970
Alignment:
Q  22 atttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcagg 121  Q
    |||||||||||||| |||||  | ||||| || |||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||||||||||     
T  9019122 atttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgaccgttttgttctgttttaaaagggcaga 9019024  T
Q  122 actaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    || | |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9019023 accagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 9018970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 21856426 - 21856588
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| ||  ||||||||||||||||| ||||||||||| |||||||||| ||||||||| ||    
T  21856426 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggagtaggacgaaaaatgcagcaaaaatgatacttgaaggaccgttttgttctgtt 21856524  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||||| |||||||  | |||| |||||||||||||||||||||||||||||||||||||||||    
T  21856525 ttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 21856588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 17433378 - 17433216
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||| |||||||||| ||||||||| ||    
T  17433378 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtt 17433280  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||||||||| |   | |||| |||||||||||||||| ||||||||||||||||||||||||    
T  17433279 ttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 17433216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 46 - 173
Target Start/End: Complemental strand, 52268416 - 52268289
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || ||||||||||||| ||||||||||||||||| |||| |||  ||||||||| ||||||||||||||||| ||||||||||| |||||||||    
T  52268416 aaaatggggggtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 52268317  T
Q  146 cacgaggaccaaaagtgtaattaagcct 173  Q
     |||||||||||||||||||||||||||    
T  52268316 tacgaggaccaaaagtgtaattaagcct 52268289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 39154181 - 39154021
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||| ||||||| |||||  | | ||| || |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||    
T  39154181 gtctaaaactgtcatttctatgcgtttttggagaat-agaatggggggtaggacgaaaaatgcaacaaaaatgataattgcaggaccgttttgttctgtt 39154083  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    ||||||||||| ||  | ||||||||||| ||||||||| || |||||||||||||||||||    
T  39154082 ttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaag 39154021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 56 - 170
Target Start/End: Original strand, 52269177 - 52269291
Alignment:
Q  56 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggacc 155  Q
    |||||||||||| ||||||||||||||||| |||| |||  ||||||||| |||||||||||||| ||  ||||| |||||| | |||||||||||||||    
T  52269177 gtaggacgaaaagtgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggacc 52269276  T
Q  156 aaaagtgtaattaag 170  Q
    |||||||||||||||    
T  52269277 aaaagtgtaattaag 52269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 86 - 175
Target Start/End: Original strand, 2733416 - 2733505
Alignment:
Q  86 ttgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    |||||||||| ||||||||| ||||||||||||||||| ||||||| || ||||||||||||| |||||||||||| |||||||||||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagcctaa 2733505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 47827039 - 47826966
Alignment:
Q  97 ttttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    ||||||| ||||||||||||||| ||| | |||||||||||| |||||||||||||||||||||||||||||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 47826966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 47827033 - 47827125
Alignment:
Q  72 aacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgta 164  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||||| ||| | ||||||||||||||||||||| |  || ||||||||||    
T  47827033 aacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacaaggagatcaaaagtgta 47827125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 44802555 - 44802720
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||| || ||||| |||| |||||||||||| ||||||||||||||| || |||| ||||| ||| |||||| || | |||| |||||||||  ||    
T  44802555 gtctaaaattgtcatttttctgtgtttctggagtt-gaaaataggaggtagaactaaaactgcaaaaaacatgatagtttagggacgattttgttccgtt 44802653  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    | |||  |||| ||| | |||||||||  || |||||  | ||||||||||||||||||||||||||    
T  44802654 tgaaagaggcatgaccactttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagcctaa 44802720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 39485226 - 39485059
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||| |||||| ||||||| |||| ||||||||||| |||||| |||| ||||| ||| || ||| || | |||| ||||||||| |||    
T  39485226 gtctaaaactgtcatctctctgtgtttctgaagtt-gaaaataggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgatt 39485129  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatta 178  Q
    | |||  || ||||| | |||||||||   | |||||  |||||||||||||||||||||| ||||||||    
T  39485128 tgaaagaggtaggaccattttcgtgagctagtcaaaatgcgaggaccaaaagtgtaattaaacctaatta 39485059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 177
Target Start/End: Original strand, 17088524 - 17088690
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||||| || |||||||||||||||||| || |||| ||||| ||| || ||| || | ||||  |||||||  |||    
T  17088524 gtctaaaactgtcatttctctgcgtttctaga-tttgaaaataggaggtagaactaaaactgcaaaaaatat-atagtttagggacggttttgtttgatt 17088621  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatt 177  Q
    | |||  |||| ||| | |||||||||  |  |||||   |||||||||||||||||||||||||||||    
T  17088622 tgaaagaggcatgaccattttcgtgagctgttcaaaatgagaggaccaaaagtgtaattaagcctaatt 17088690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 177
Target Start/End: Complemental strand, 9992315 - 9992149
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||||| || |||||||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || |||||||||||||||| ||||     
T  9992315 ctaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggaccattttgttcgattta 9992217  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacg-aggaccaaaagtgtaattaagcctaatt 177  Q
    |||| |  ||||| | || ||||||| || |||||   | ||||||||||||||||||||||||||||    
T  9992216 aaaaagataggaccatttccgtgagttggtcaaaaatggtaggaccaaaagtgtaattaagcctaatt 9992149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 177
Target Start/End: Original strand, 45048533 - 45048686
Alignment:
Q  22 atttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcagg 121  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||||| ||| |||||| ||  |||||  |||||||| |||  |||  || | |    
T  45048533 atttctctgcgtttctggagtt-gaaaataggaggtaggactaaaactgcaaaaaacatgatagtt-taggacggttttgttcgattggaaagaggtatg 45048630  T
Q  122 actaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatt 177  Q
    || | ||||||||   || |||||  |||||||||||||||||||||| |||||||    
T  45048631 accattttcgtgaactggtcaaaatgcgaggaccaaaagtgtaattaaacctaatt 45048686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 172
Target Start/End: Original strand, 9833549 - 9833698
Alignment:
Q  22 atttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcagg 121  Q
    |||||| ||||||||||||||| ||||||||| |||||||| |||| ||||| ||| || ||| || | |||| ||||||||| |||| |||  |||| |    
T  9833549 atttctgtgcgtttctggagtt-gaaaatagggggtaggactaaaactgcaaaaaacataatattttagggacgattttgttcgatttgaaagaggcatg 9833647  T
Q  122 actaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||| |||||||||| || ||||  || |||| |||||||  |||||||||    
T  9833648 actattttcgtgagttggtcaaagtacaaggatcaaaagtacaattaagcc 9833698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 17088312 - 17088243
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 79  Q
    ||||||||||||||||||||||| |||||| || |||||||||||||||||||| |||| ||||| |||||    
T  17088312 gtctaaaactgccatttctctgcatttctgaag-ttgaaaataggaggtaggactaaaattgcaaaaaaaa 17088243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 45048316 - 45048158
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||||| ||||||||||||| ||||||||| |||||||||| |||| ||||| ||| || ||| || | |||| ||||||||| |||    
T  45048316 gtctaaaactgttatttctatgcgtttctggag-ttgaaaatatgaggtaggactaaaactgcaaaaaacat-atagtttatggacgattttgttcaatt 45048219  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    | |||  || || || | |||||| ||| || |||||  | ||||||||||||||||||||    
T  45048218 taaaagaggtagaaccattttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaa 45048158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 4636134 - 4636033
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| || ||  | ||||| || ||||| || ||||||||||||||||||||| ||||||||||  |||||||| ||    
T  4636134 gtctaaaactgtcatttctctgcgtttttgaagaat-aaaatggggggtagaacaaaaaatgcaacaaaaatgatacttgaaggacc-gtttgttctgtt 4636037  T
Q  109 ttaa 112  Q
    ||||    
T  4636036 ttaa 4636033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 50419725 - 50419806
Alignment:
Q  91 ggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||| |||||||| ||||||||| |||||||| |||||||||||| || | |||  ||| ||||||||||| |||||||||    
T  50419725 ggaccgttttgttcaattttaaaaaggcaggaccaatttcgtgagttggtctaaatgcgatgaccaaaagtgcaattaagcc 50419806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 29021252 - 29021415
Alignment:
Q  13 aaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccattttgttctatttta 111  Q
    ||||||| ||||| | ||||||||||||||| ||||||||| |||| ||| |||| ||||| |||   |||||||| | |||| ||||||||| |||| |    
T  29021252 aaaactgtcatttatgtgcgtttctggagtt-gaaaatagggggtaagactaaaactgcaaaaaaccgtgataatttagggacgattttgttcgatttga 29021350  T
Q  112 aaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaat 176  Q
    ||  |||| ||  | |||||||||  || |||||   |||||||||||||| |||||||||||||    
T  29021351 aagaggcatgaacattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaagcctaat 29021415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 29439011 - 29438929
Alignment:
Q  91 ggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||| ||||||||| |||| |||  || ||||| |||||||||||| || |||||  | ||||||||||||||||||||||||    
T  29439011 ggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagcct 29438929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 169
Target Start/End: Original strand, 17641750 - 17641912
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaa----aatgataattgaaggaccattttgttcta 106  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||    ||  ||| || | |||| ||||||||| |    
T  17641750 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaaataaaaatagtttagggacgattttgttcga 17641849  T
Q  107 ttttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||| |||  || | ||| | |||||||||| || |||||  ||||||||||||||||||||||    
T  17641850 tttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 17641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 44291701 - 44291769
Alignment:
Q  15 aactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 84  Q
    ||||||||||||| || |||||||||||| ||||||||| |||||||| |||| ||||| ||| ||||||    
T  44291701 aactgccatttctatgtgtttctggagtt-gaaaatagggggtaggactaaaactgcaaaaaacatgata 44291769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 170
Target Start/End: Complemental strand, 50926392 - 50926232
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggta-ggacgaaaaatgcaacaaaaa-tgataattgaaggaccattttgttctatt 108  Q
    |||||||| |||||| | || |||||||||||| |||||||||||||| |||| |||| ||||| ||||| ||||| || | |||| ||||||||| |||    
T  50926392 ctaaaactaccatttatgtgtgtttctggagtt-gaaaataggaggtaaggactaaaactgcaaaaaaaaatgatagtttagggacgattttgttcgatt 50926294  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    | |||  || | || || |||||||||  || |||||   ||||||||||| ||||||||||    
T  50926293 tgaaagaggtatgattattttcgtgagctggtcaaaatgggaggaccaaaactgtaattaag 50926232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 34555766 - 34555926
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa-tgataattgaaggaccattttgttctattt 109  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| || ||| |||| ||||| |||||   ||| || |||||| ||||||||| ||||    
T  34555766 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaaacatatagtttaaggacgattttgttcgattt 34555865  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
     |||| |  ||||| | |||||||||| || |||||    ||||| |||||||||||||||    
T  34555866 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaag 34555926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 174
Target Start/End: Original strand, 50926627 - 50926789
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggta-ggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattt 109  Q
    |||||||| |||||| | || |||| ||||||| ||||||||| |||| |||| |||| ||||| |||||||||| || | ||||  |||||||| ||||    
T  50926627 ctaaaactaccatttatgtgtgtttatggagtt-gaaaatagggggtaaggactaaaactgcaa-aaaaatgatagtttagggacggttttgttcgattt 50926724  T
Q  110 taaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
     |||  | | |||| | |||||||||  || |||||  ||| |||||||||||||||||||||||    
T  50926725 gaaagagacgggaccattttcgtgagctggtcaaaatgcgatgaccaaaagtgtaattaagccta 50926789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 170
Target Start/End: Complemental strand, 10278709 - 10278550
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    |||||| || ||||| | |||||||||||||||  |||   |||| |||||| |||| ||||| ||||   ||| || | |||| ||||||||| ||||     
T  10278709 ctaaaattgtcatttatgtgcgtttctggagttgcaaatggggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattta 10278610  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    |||  || ||||  |||||||||||| || |||||  | |||||||||||||||||||||    
T  10278609 aaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 10278550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 30786932 - 30786770
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||| | ||||||| ||||||| ||||||| ||||   |||| |||||| |||| ||||| ||| || ||| || | |||| ||||||||| ||||     
T  30786932 ctaaaaccgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattta 30786834  T
Q  111 aaaagggcaggactaattt-cgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||  || ||||| ||||| ||||||| || |||||  | || |||||||||||||||||||||    
T  30786833 aaagaggtaggaccaattttcgtgagttggtcaaaatgcaagaaccaaaagtgtaattaagcct 30786770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 23526815 - 23526659
Alignment:
Q  14 aaactgccatttctctgcgtttctggagtttgaaaataggaggtagg-acgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaa 112  Q
    |||||| ||||||| ||||||| ||||||| ||||||||| || ||| || |||| ||||| |||||||||| |  | |||  ||||||||| |||| ||    
T  23526815 aaactgtcatttctgtgcgtttttggagtt-gaaaatagggggcagggactaaaactgcaa-aaaaatgatagtctagggatgattttgttcgatttaaa 23526718  T
Q  113 aagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 171  Q
    |  |||||||| | |||||||||  || |||||   ||||||||||||||||| |||||    
T  23526717 agaggcaggaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaactaagc 23526659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 39843497 - 39843571
Alignment:
Q  99 ttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||||| |||| |||| |||||||| |||||||||||| || | |||  |||||||| |||||||||| ||||||    
T  39843497 ttgttcgatttgaaaaaggcaggaccaatttcgtgagttggtctaaatgcgaggaccgaaagtgtaataaagcct 39843571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 170
Target Start/End: Complemental strand, 44291462 - 44291303
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa--tgataattgaaggaccattttgttctatt 108  Q
    |||||||||| |||| | |||||||||||| |||||||| |||||||| ||| |||| ||||| |||||  ||||| || | |||| ||||||||| |||    
T  44291462 ctaaaactgctattt-tgtgcgtttctgga-tttgaaaacaggaggtatgactaaaactgcaaaaaaaacatgatagtttatggacgattttgttcaatt 44291365  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    | |||  ||||  || | |||||||||  || |||||   |||||||||||||| |||||||    
T  44291364 tgaaagaggcataaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaag 44291303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 52335896 - 52336057
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    ||||||||| ||||| | ||||||||||||||| ||||   |||| || ||| |||| ||||| |||||| ||| || | |||| ||||||||| ||||     
T  52335896 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaaat-atagtttagggacgattttgttcgattta 52335994  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||  || ||||| |||||| ||||| || |||||    || |||||||| ||||||||||||    
T  52335995 aaagaggtaggaccaatttcatgagttggtcaaaatgatagaaccaaaagagtaattaagcct 52336057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 172
Target Start/End: Original strand, 9992542 - 9992701
Alignment:
Q  12 taaaactgccatttctctgcgtttctggagtttgaaaatagg-aggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 110  Q
    |||||||| |||||||  |||||||||||||| ||||||||| || |||||| || | ||||| ||| || ||| || ||| || ||||||||| ||||     
T  9992542 taaaactgtcatttctacgcgtttctggagtt-gaaaatagggagataggactaatactgcaaaaaacat-atagtttaagcacgattttgttcgattta 9992639  T
Q  111 aaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    |||| |  ||||| | |||| |||||  | |||||  | |||||||||||||||||||||||    
T  9992640 aaaaagataggaccattttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaagcc 9992701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 8229800 - 8229732
Alignment:
Q  11 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaa 79  Q
    ||||||||| ||||||| ||||||||||||||| ||||   |||| |||||| |||| ||||| |||||    
T  8229800 ctaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaaa 8229732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 52233812 - 52233736
Alignment:
Q  98 tttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||| | || ||||||| || || |||||||| ||| ||  ||||| ||||||| |||||||||||||||||||    
T  52233812 tttgttcgacttgaaaagggtagcaccaatttcgtaagttggttaaaacccgaggacgaaaagtgtaattaagccta 52233736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 139; Significance: 8e-73; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 2041 - 2215
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  2041 ctaaaaccgcctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgtttt 2140  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||| ||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2141 gttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 2215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 174
Target Start/End: Complemental strand, 1829 - 1665
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  1829 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaacattttgttctgtt 1731  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1730 ttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagccta 1665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 136; Significance: 5e-71; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 10997 - 11168
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10997 ctaaaaccgcctaaaactgcaatttctctgcgtttctcgagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 11096  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||| | ||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||    
T  11097 gttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 10784 - 10640
Alignment:
Q  8 cgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctat 107  Q
    |||||||||||| ||||||||||| ||| |||||  | ||||| |  |||||||||||||||||||| ||||||||| |||||||||| ||||||||| |    
T  10784 cgtctaaaactgtcatttctctgcatttttggagaat-aaaatggagggtaggacgaaaaatgcaacgaaaatgatacttgaaggaccgttttgttctgt 10686  T
Q  108 tttaaaagggcaggactaatttcgtgagtaggccaaaacacgagga 153  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||    
T  10685 tttaaaagggcaggaccagtttcatgagtaggccaaaacacgagga 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 1123 - 1286
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||    
T  1123 gtctaaaactgccatttttctgcgtttctggggtttgaaaataggaggtaggacgaaagatgcaacaaaaatgataattgaaggaccgttttgttctgtt 1222  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||||||||||||| | ||||||||||| |||||||||||||||| |||||||||||||||||    
T  1223 ttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaattaagcc 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 914 - 755
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || |||||||||||||||||||||||| |||||||||||||||| ||||||||| ||    
T  914 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccgttttgttctgtt 817  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    ||||||||||||||| | | |||||||||||||||||||||| |||||||||||||||||||    
T  816 ttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaag 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 4955 - 4787
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  4955 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 4857  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatta 178  Q
    ||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4856 ttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaatta 4787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 5169 - 5334
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||  ||| ||||    
T  5169 ctaaaaccgcctaaaactgtcatttttctgcgtttctggagtttgaaaataggagg----acgaaaaatgcaacaaaaatgataattgaattaccgtttt 5264  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
     |||| |||||||||| || ||| | |||||||| |||||||||||||||||||||||||||||||||||    
T  5265 attctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaaaagtgtaattaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 113; Significance: 2e-57; HSPs: 6)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 64679 - 64847
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| |||||||||  |||| ||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||| ||||    
T  64679 ctaaaaccgcctaaaactgttatttttctccgtttctggagtttgaaaatagaagataggacgaaaaatgcaacaaaaatgataattaaaggaccgtttt 64778  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    ||||| |||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  64779 gttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaa 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 64464 - 64301
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||| |||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  64464 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 64366  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||||||| |||||  | ||||||||||| | |||||||||||||||||||||||||||||||||    
T  64365 ttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 64301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 205752 - 205911
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||| ||||||| |||| ||||| ||| |||||| || | ||||  |||||||| |||    
T  205752 gtctaaaactgccatttctctgcgtttttggag-ttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacggttttgttcgatt 205849  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 170  Q
    | |||  |||||||| | |||||||||| || |||||   |||||| |||||||||||||||    
T  205850 tgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 205112 - 205038
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 84  Q
    |||||||||| ||||||||||| |||||| ||||| |||||||||||||||||| |||| ||||| ||| ||||||    
T  205112 gtctaaaacttccatttctctgtgtttctagagtt-gaaaataggaggtaggactaaaactgcaaaaaacatgata 205038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 205541 - 205468
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgata 84  Q
    |||||||||||||||||||||| | |||| ||| ||||||||||||||| |||| |||| | ||| ||||||||||    
T  205541 gtctaaaactgccatttctctgtgattctagag-ttgaaaataggaggttggactaaaactacaa-aaaaatgata 205468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 173
Target Start/End: Original strand, 210786 - 210884
Alignment:
Q  75 aaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    |||||||||| || | ||||  |||||||| |||| |||  |||||||| | |||| ||||| || |||||   |||||||||||||||||||||||||    
T  210786 aaaaatgatagtttagggacggttttgttcgatttgaaagaggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaagcct 210884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 134056 - 134221
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||||||||||||||| ||||||||||| | ||||||||| |     
T  134056 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatcgttttgttctgta 134154  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 175  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  134155 ttaaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 134221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 16870 - 17024
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    |||||| || |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16870 ctaaaatcgcctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaatttt 16969  T
Q  101 gttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggacc 155  Q
    ||||| |||||||| ||| |||  | ||||||||||| | |||||||||||||||    
T  16970 gttctgttttaaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 16658 - 16564
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttc 104  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  16658 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttc 16564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 102; Significance: 9e-51; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 4590 - 4754
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| |||||||||| |||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||    
T  4590 gtctaaaactgtcatttctctgtgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtt 4688  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||||||| | ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  4689 ttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaagccta 4754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 4374 - 4242
Alignment:
Q  1 ctaaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccatttt 100  Q
    ||||||||| ||||||||| ||||||||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  4374 ctaaaaccgcctaaaactgtcatttctctgcatttttagagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgtttt 4275  T
Q  101 gttctattttaaaagggcaggactaatttcgtg 133  Q
    ||| | ||||||||||||||||| | |||||||    
T  4274 gttttgttttaaaagggcaggaccagtttcgtg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 42332 - 42172
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||| ||||||||| ||    
T  42332 gtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 42233  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    |||||| |||||||  | |||||||| ||| |||||||||||| || ||||||||||||||    
T  42232 ttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaa 42172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 42542 - 42713
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    ||||||||||| ||||||||||||||| |||||  | ||||| || |||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||    
T  42542 gtctaaaactgtcatttctctgcgtttttggagaat-aaaatggg-ggtaggacgaaaaatgaaacaaaaatgataactgaaggaccgttttgttctgtt 42639  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaattataaa 182  Q
    |||||||||||| |  | |||| ||||||| ||||||||||||| |||||||| ||||||||||||| ||||||    
T  42640 ttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagcctaaatataaa 42713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 92; Significance: 8e-45; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 10100 - 9935
Alignment:
Q  2 taaaaccgtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttg 101  Q
    |||||||| |||||| || ||||||||| ||||||| ||||||||||||||||||||||| ||||| || ||||||| ||||||||||||||||||||||    
T  10100 taaaaccgcctaaaattgtcatttctct-cgtttcttgagtttgaaaataggaggtaggatgaaaa-tgtaacaaaattgataattgaaggaccattttg 10003  T
Q  102 ttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 169  Q
    |||||| ||||||||||| ||  | |||||||| ||||| |||||||||||||||||| |||||||||    
T  10002 ttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgtaattaa 9935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 10300 - 10414
Alignment:
Q  55 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggac 154  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |  || | |||||||||||| |||||||||||||||    
T  10300 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggac 10399  T
Q  155 caaaagtgtaattaa 169  Q
    |||||||||||||||    
T  10400 caaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 75 - 172
Target Start/End: Original strand, 19069 - 19166
Alignment:
Q  75 aaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 172  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 18996 - 18834
Alignment:
Q  9 gtctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatt 108  Q
    |||||||||||  |||||||||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||||| ||| ||||||| | ||    
T  18996 gtctaaaactgttatttctctgcgtttttggagaat-aaaatggg-ggtaggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgttatgtt 18899  T
Q  109 ttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 173  Q
    ||||||||||| ||| | |||||||||||||||||||||  ||||||||||||||||| ||||||    
T  18898 ttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagcct 18834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 47 - 171
Target Start/End: Complemental strand, 692 - 568
Alignment:
Q  47 aaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaac 146  Q
    |||| ||||||  |||||||||| ||||||||||||||||||||||||  ||||||||| ||||||||||||| ||  | ||||||||||||||||||||    
T  692 aaatgggaggtgagacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcattttcgtgagtaggccaaaac 593  T
Q  147 acgaggaccaaaagtgtaattaagc 171  Q
    ||||||| |||||||||||||||||    
T  592 acgaggatcaaaagtgtaattaagc 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 28674 - 28789
Alignment:
Q  58 aggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaa 157  Q
    |||||||||| |||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||| | |||||| ||||||||||||||||| ||||||    
T  28674 aggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaa 28773  T
Q  158 aagtgtaattaagcct 173  Q
    ||||||||||| ||||    
T  28774 aagtgtaattatgcct 28789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 61877 - 62000
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaa 145  Q
    ||||| || |||||||||||||||  ||||||||||||| ||||| ||  |||||||||||||||||||||| ||||| | |||||||||||| ||||||    
T  61877 aaaatggggggtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttcgtgagtagaccaaaa 61976  T
Q  146 cacgaggaccaaaagtgtaattaa 169  Q
    |||||||| |||||||||||||||    
T  61977 cacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 61102 - 61026
Alignment:
Q  98 tttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 174  Q
    ||||||||||||||||| |||||||  | ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagccta 61026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 168
Target Start/End: Complemental strand, 565 - 454
Alignment:
Q  56 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggacc 155  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||| | |||||||||  || ||| | |||||||||||||||||||||||| ||||    
T  565 gtaggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttcgtgagtaggccaaaacacgaagacc 466  T
Q  156 aaaagtgtaatta 168  Q
    |||| ||||||||    
T  465 aaaa-tgtaatta 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 169
Target Start/End: Original strand, 8451 - 8551
Alignment:
Q  69 tgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggactaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaatta 168  Q
    ||||||||||||||||||||||||||| ||||| | | ||||||||||| ||||| | |||||| ||||| |||||||| || |||||||||||||||||    
T  8451 tgcaacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaatta 8550  T
Q  169 a 169  Q
    |    
T  8551 a 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 7707 - 7784
Alignment:
Q  46 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggac 123  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| |||  ||||||||| ||||||||||| |||||    
T  7707 aaaatagggggtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaagggaaggac 7784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1339 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 182
Target Start/End: Original strand, 30 - 65
Alignment:
Q  147 acgaggaccaaaagtgtaattaagcctaattataaa 182  Q
    |||||||||||||||||||||||||||||| |||||    
T  30 acgaggaccaaaagtgtaattaagcctaataataaa 65  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0830 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0830
Description:

Target: scaffold0830; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 182
Target Start/End: Original strand, 5352 - 5387
Alignment:
Q  147 acgaggaccaaaagtgtaattaagcctaattataaa 182  Q
    |||||||||||||||||||||||||||||| |||||    
T  5352 acgaggaccaaaagtgtaattaagcctaataataaa 5387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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