View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17615_high_61 (Length: 236)

Name: NF17615_high_61
Description: NF17615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17615_high_61
NF17615_high_61
[»] chr2 (27 HSPs)
chr2 (1-221)||(36855061-36855280)
chr2 (1-221)||(8855194-8855414)
chr2 (1-209)||(37245861-37246069)
chr2 (1-221)||(9072626-9072846)
chr2 (1-221)||(12858086-12858306)
chr2 (1-221)||(30819323-30819543)
chr2 (1-221)||(31184943-31185163)
chr2 (1-221)||(31204669-31204889)
chr2 (47-221)||(2778851-2779025)
chr2 (1-158)||(4296308-4296465)
chr2 (45-221)||(39432459-39432636)
chr2 (1-221)||(926507-926726)
chr2 (46-99)||(1987459-1987512)
chr2 (98-156)||(16218480-16218538)
chr2 (98-158)||(17486112-17486171)
chr2 (98-158)||(17928948-17929007)
chr2 (98-158)||(36209203-36209262)
chr2 (1-155)||(1072717-1072870)
chr2 (98-203)||(6363615-6363719)
chr2 (98-203)||(7762923-7763027)
chr2 (1-89)||(9118153-9118241)
chr2 (98-158)||(1308422-1308481)
chr2 (116-158)||(4279363-4279405)
chr2 (116-158)||(5145135-5145177)
chr2 (116-158)||(22349670-22349712)
chr2 (46-88)||(43494974-43495016)
chr2 (115-155)||(9118099-9118139)
[»] chr5 (27 HSPs)
chr5 (1-221)||(25033383-25033603)
chr5 (1-221)||(4580204-4580424)
chr5 (1-221)||(31011735-31011955)
chr5 (1-221)||(41152532-41152751)
chr5 (49-221)||(7827310-7827481)
chr5 (56-221)||(21367783-21367948)
chr5 (47-158)||(41263689-41263800)
chr5 (1-140)||(8176025-8176163)
chr5 (1-137)||(25653100-25653239)
chr5 (98-156)||(177415-177473)
chr5 (98-203)||(25670549-25670653)
chr5 (98-151)||(36609884-36609937)
chr5 (98-158)||(4219159-4219218)
chr5 (98-154)||(15972862-15972918)
chr5 (98-158)||(39008778-39008837)
chr5 (45-203)||(30644738-30644895)
chr5 (98-220)||(32363200-32363321)
chr5 (98-203)||(27405927-27406031)
chr5 (98-158)||(13479337-13479396)
chr5 (98-158)||(23089804-23089863)
chr5 (46-89)||(34529114-34529157)
chr5 (45-87)||(8681014-8681056)
chr5 (116-158)||(39238815-39238857)
chr5 (46-84)||(27407474-27407512)
chr5 (116-158)||(29616260-29616302)
chr5 (98-155)||(36572153-36572209)
chr5 (98-203)||(42804527-42804631)
[»] chr4 (40 HSPs)
chr4 (1-221)||(46914195-46914415)
chr4 (1-221)||(2212001-2212221)
chr4 (1-209)||(47749733-47749941)
chr4 (1-221)||(53181137-53181357)
chr4 (1-221)||(36658637-36658857)
chr4 (46-221)||(21654553-21654728)
chr4 (2-209)||(19409689-19409896)
chr4 (5-158)||(27141870-27142023)
chr4 (45-153)||(7401442-7401550)
chr4 (2-137)||(10090033-10090168)
chr4 (1-118)||(40596419-40596535)
chr4 (45-156)||(39048751-39048862)
chr4 (45-203)||(23539370-23539527)
chr4 (69-116)||(31848516-31848563)
chr4 (98-158)||(34434284-34434343)
chr4 (1-88)||(55408222-55408309)
chr4 (116-158)||(28447506-28447548)
chr4 (98-220)||(33607216-33607337)
chr4 (1-89)||(48506250-48506338)
chr4 (98-158)||(4981931-4981990)
chr4 (98-158)||(27864175-27864234)
chr4 (98-158)||(28901216-28901275)
chr4 (45-203)||(28901331-28901488)
chr4 (98-158)||(13093905-13093964)
chr4 (98-158)||(17329647-17329706)
chr4 (46-158)||(34463238-34463349)
chr4 (98-158)||(35809661-35809720)
chr4 (116-158)||(3530027-3530069)
chr4 (116-158)||(8995015-8995057)
chr4 (116-158)||(13113793-13113835)
chr4 (116-158)||(16171653-16171695)
chr4 (116-158)||(19273185-19273227)
chr4 (116-158)||(34199027-34199069)
chr4 (116-158)||(48403661-48403703)
chr4 (98-203)||(53347430-53347537)
chr4 (116-158)||(56054514-56054556)
chr4 (45-86)||(56054581-56054622)
chr4 (98-142)||(45081220-45081263)
chr4 (115-155)||(48506352-48506392)
chr4 (46-90)||(52773218-52773262)
[»] chr3 (50 HSPs)
chr3 (1-221)||(17469611-17469831)
chr3 (1-221)||(25787414-25787634)
chr3 (1-221)||(25829371-25829591)
chr3 (1-221)||(47147468-47147688)
chr3 (1-221)||(42598069-42598289)
chr3 (1-208)||(5844677-5844884)
chr3 (46-221)||(49086332-49086507)
chr3 (45-221)||(50020193-50020369)
chr3 (45-221)||(51435821-51435997)
chr3 (46-209)||(33751519-33751682)
chr3 (45-221)||(49822647-49822823)
chr3 (1-158)||(25450139-25450296)
chr3 (46-200)||(30688605-30688759)
chr3 (46-221)||(50034485-50034660)
chr3 (66-221)||(33936382-33936537)
chr3 (51-221)||(42602065-42602235)
chr3 (1-140)||(37410143-37410279)
chr3 (50-141)||(49356997-49357088)
chr3 (98-158)||(15493530-15493590)
chr3 (99-158)||(21229361-21229420)
chr3 (103-221)||(21228317-21228435)
chr3 (98-153)||(47700694-47700749)
chr3 (1-89)||(46572614-46572702)
chr3 (1-88)||(35852897-35852984)
chr3 (98-221)||(12975037-12975159)
chr3 (98-209)||(51974448-51974558)
chr3 (98-156)||(11908309-11908366)
chr3 (98-203)||(48886572-48886676)
chr3 (98-158)||(20139817-20139876)
chr3 (98-158)||(33187852-33187911)
chr3 (98-158)||(35472057-35472116)
chr3 (98-158)||(49027159-49027218)
chr3 (98-158)||(51304829-51304888)
chr3 (98-158)||(51999809-51999868)
chr3 (13-86)||(33795179-33795252)
chr3 (45-155)||(55027026-55027135)
chr3 (1-88)||(28410721-28410809)
chr3 (98-154)||(26162279-26162334)
chr3 (98-158)||(31170006-31170065)
chr3 (98-158)||(35540309-35540368)
chr3 (46-158)||(42564206-42564317)
chr3 (119-158)||(6832883-6832922)
chr3 (116-158)||(6045100-6045142)
chr3 (45-87)||(7008440-7008482)
chr3 (98-144)||(46137012-46137057)
chr3 (116-158)||(50415566-50415608)
chr3 (98-155)||(38571902-38571958)
chr3 (46-90)||(4046447-4046491)
chr3 (46-86)||(7520829-7520869)
chr3 (98-154)||(36178222-36178277)
[»] chr8 (36 HSPs)
chr8 (1-221)||(8449691-8449911)
chr8 (1-209)||(36912775-36912983)
chr8 (1-221)||(13817246-13817466)
chr8 (45-221)||(35101592-35101768)
chr8 (1-221)||(5213992-5214212)
chr8 (1-221)||(26748616-26748836)
chr8 (1-209)||(34954990-34955198)
chr8 (46-221)||(17744773-17744948)
chr8 (45-158)||(18029047-18029160)
chr8 (45-158)||(43617929-43618042)
chr8 (1-141)||(4625182-4625319)
chr8 (66-221)||(5736224-5736379)
chr8 (45-153)||(26414466-26414574)
chr8 (1-118)||(26631810-26631926)
chr8 (1-118)||(30470476-30470592)
chr8 (45-116)||(42860996-42861067)
chr8 (46-150)||(17494306-17494409)
chr8 (119-221)||(27392671-27392773)
chr8 (51-152)||(231620-231721)
chr8 (51-152)||(708031-708132)
chr8 (51-152)||(745243-745344)
chr8 (51-152)||(869138-869239)
chr8 (98-203)||(13947687-13947791)
chr8 (117-158)||(23550011-23550052)
chr8 (98-158)||(29731952-29732011)
chr8 (98-158)||(30529389-30529448)
chr8 (98-158)||(44150168-44150227)
chr8 (98-158)||(44503532-44503591)
chr8 (1-87)||(41477527-41477613)
chr8 (45-155)||(12272159-12272268)
chr8 (116-154)||(13783949-13783987)
chr8 (116-158)||(26244898-26244940)
chr8 (116-158)||(43524008-43524050)
chr8 (46-203)||(15056798-15056954)
chr8 (98-158)||(1633159-1633218)
chr8 (98-158)||(38204971-38205030)
[»] chr7 (28 HSPs)
chr7 (1-221)||(5813473-5813693)
chr7 (45-221)||(22194423-22194599)
chr7 (1-221)||(30630292-30630512)
chr7 (1-209)||(33379492-33379700)
chr7 (45-221)||(25217990-25218168)
chr7 (1-158)||(35028477-35028635)
chr7 (45-158)||(24793688-24793801)
chr7 (1-141)||(37888656-37888795)
chr7 (98-221)||(1939676-1939799)
chr7 (45-142)||(35192804-35192901)
chr7 (69-116)||(48985189-48985236)
chr7 (1-88)||(43570799-43570886)
chr7 (98-153)||(43201680-43201735)
chr7 (98-203)||(32749177-32749281)
chr7 (98-203)||(40690549-40690653)
chr7 (98-158)||(20354528-20354587)
chr7 (98-158)||(26815394-26815453)
chr7 (98-158)||(32126994-32127053)
chr7 (98-158)||(33508353-33508412)
chr7 (98-158)||(38970319-38970378)
chr7 (98-152)||(114951-115004)
chr7 (98-158)||(37952047-37952106)
chr7 (98-158)||(39769997-39770056)
chr7 (116-158)||(38351884-38351926)
chr7 (116-158)||(42881864-42881906)
chr7 (98-158)||(33078558-33078617)
chr7 (45-81)||(43201638-43201674)
chr7 (98-150)||(45549131-45549182)
[»] chr6 (16 HSPs)
chr6 (1-221)||(6377136-6377356)
chr6 (1-221)||(17958004-17958224)
chr6 (1-221)||(634877-635097)
chr6 (1-208)||(34328608-34328815)
chr6 (45-221)||(29951776-29951952)
chr6 (1-158)||(2503603-2503760)
chr6 (1-158)||(198084-198242)
chr6 (45-158)||(32360008-32360120)
chr6 (98-221)||(7540410-7540533)
chr6 (57-156)||(24115311-24115410)
chr6 (98-158)||(18642516-18642575)
chr6 (1-158)||(12502170-12502326)
chr6 (45-152)||(12513293-12513399)
chr6 (45-89)||(8222441-8222485)
chr6 (98-158)||(26653897-26653956)
chr6 (98-158)||(26759866-26759925)
[»] chr1 (31 HSPs)
chr1 (1-221)||(31471383-31471603)
chr1 (1-221)||(45242247-45242467)
chr1 (1-208)||(37419881-37420088)
chr1 (1-221)||(52930349-52930569)
chr1 (1-208)||(27629997-27630204)
chr1 (46-221)||(17786440-17786615)
chr1 (45-158)||(37646137-37646250)
chr1 (1-158)||(8464824-8464982)
chr1 (1-150)||(44450922-44451071)
chr1 (1-150)||(44651341-44651490)
chr1 (46-152)||(36303360-36303466)
chr1 (98-158)||(48927141-48927201)
chr1 (46-152)||(48729700-48729806)
chr1 (45-105)||(20584519-20584579)
chr1 (69-116)||(643565-643612)
chr1 (98-203)||(29524126-29524230)
chr1 (98-203)||(51523492-51523596)
chr1 (98-158)||(45455646-45455705)
chr1 (114-156)||(18317587-18317629)
chr1 (100-142)||(38212634-38212676)
chr1 (98-203)||(45363704-45363808)
chr1 (46-158)||(31159693-31159804)
chr1 (98-203)||(36231141-36231244)
chr1 (98-203)||(51156425-51156529)
chr1 (46-89)||(41542636-41542679)
chr1 (45-203)||(17676042-17676198)
chr1 (116-158)||(48384947-48384989)
chr1 (51-88)||(3754760-3754797)
chr1 (98-158)||(33167483-33167545)
chr1 (98-158)||(8471484-8471542)
chr1 (98-158)||(47297332-47297391)
[»] scaffold0758 (1 HSPs)
scaffold0758 (46-221)||(6421-6594)
[»] scaffold0007 (1 HSPs)
scaffold0007 (98-208)||(166140-166250)
[»] scaffold0012 (1 HSPs)
scaffold0012 (45-147)||(124309-124411)
[»] scaffold1905 (2 HSPs)
scaffold1905 (98-158)||(1175-1234)
scaffold1905 (98-203)||(144-248)
[»] scaffold1454 (1 HSPs)
scaffold1454 (98-158)||(540-599)
[»] scaffold0021 (1 HSPs)
scaffold0021 (98-203)||(109954-110058)
[»] scaffold0004 (1 HSPs)
scaffold0004 (98-158)||(106105-106164)


Alignment Details
Target: chr2 (Bit Score: 142; Significance: 1e-74; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 36855061 - 36855280
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  36855061 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtg- 36855159  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        |||||||||||||||||||||||| |||||||||    
T  36855160 agttttaatcttatttttagtgaaatggatcccaatagtaatcatttcaacacccaaaatttttctaattacccatttaattacgaaaatcccaacaatt 36855259  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| |||||||||||    
T  36855260 atccaaatccaattcaatttt 36855280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 8855414 - 8855194
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8855414 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctttctattagcaaactaagtga 8855315  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||        |||||||||||||| ||||||||| |||||||||    
T  8855314 agttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaattattctaattacccatttaactacgaaaatcccaacaatt 8855215  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  8855214 atccaaatccaaatcaatttt 8855194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 37246069 - 37245861
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||| ||| ||||||||         |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37246069 taaatagagacttggttcatttaatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctttctattagcaaactaagtga 37245970  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||        |||||||||||||| ||||||||| |||||||||    
T  37245969 agttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaatt 37245870  T
Q  201 atccaaatc 209  Q
    |||||||||    
T  37245869 atccaaatc 37245861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 9072626 - 9072846
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||| |||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9072626 taaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 9072725  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||        |||||||||| ||| ||||||||| |||||||||    
T  9072726 agttttaatcttatttgttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatataactacgaaaatcccaacaatt 9072825  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  9072826 atccaaatccaaatcaatttt 9072846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 12858306 - 12858086
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||| |||||||||| ||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12858306 taaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 12858207  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||        |||||||||| ||| ||||||||| |||||||||    
T  12858206 agttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatataactacgaaaatcccaacaatt 12858107  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  12858106 atccaaatccaaatcaatttt 12858086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 30819323 - 30819543
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||| |||||||||| ||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30819323 taaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 30819422  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||        |||||||||| ||| ||||||||| |||||||||    
T  30819423 agttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatataactacgaaaatcccaacaatt 30819522  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  30819523 atccaaatccaaatcaatttt 30819543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 31184943 - 31185163
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||| ||         ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  31184943 taaatagagacttggttcatttgatttggacaaagaaaaaaaaaccaagtttttcactatcttaatcttattattatctttctattagaaaactaagtga 31185042  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||        |||||||||||||| ||  ||||| |||||||||    
T  31185043 agttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactaataaaatcccaacaatt 31185142  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  31185143 atccaaatccaaatcaatttt 31185163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 31204669 - 31204889
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||| ||         ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  31204669 taaatagagacttggttcatttgatttggacaaagaaaaaaaaaccaagtttttcactatcttaatcttattattatctttctattagtaaactaagtga 31204768  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||        |||||||||||||| ||||||||| |||||||||    
T  31204769 agttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaccaaaaattattctaattacccatttaactacgaaaatcccaacaatt 31204868  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||  ||| || ||||||||    
T  31204869 atcctcatccaaatcaatttt 31204889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 47 - 221
Target Start/End: Original strand, 2778851 - 2779025
Alignment:
Q  47 aagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcatt 146  Q
    |||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2778851 aagtttttcactatctccatcttattattatttttctattaccaaactaagtgaagttttaatcttatttttagtgaaatggatctcaataataatcatt 2778950  T
Q  147 tcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    ||||||||||||        ||||| |||||||| ||||||||| |||||||||||||||||| || ||||||||    
T  2778951 tcaacacccaaaattattctaattatccatttaactacgaaaatcccaacaattatccaaatcgaaatcaatttt 2779025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 4296308 - 4296465
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4296308 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctttctattagcaaactaagtga 4296407  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  4296408 agttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaa 4296465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 39432459 - 39432636
Alignment:
Q  45 ccaagtttttcactatcttcatctt-attattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatc 143  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||| |    
T  39432459 ccaagtttttcactatcttcatctttattattatctttctattagcaaactaagtgaagttttaatcttactttttgtaaaatggatcccaataataacc 39432558  T
Q  144 atttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    |||||||||||||||        |||||||| ||||| |||||||||  ||||||||||||||||| || ||||||||    
T  39432559 atttcaacacccaaaatttttctaattacccctttaactacgaaaatcgcaacaattatccaaatccaaatcaatttt 39432636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 926507 - 926726
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  926507 taaatagagacttggttcatttgatttggacacagaaaaaaaa-ccaagtttttcactatcttaatcttattattatctttctattagcaaactaagtga 926605  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    ||||||||| ||||||||||||||||| ||| |||||||||  |||||||||||||||        |||| | ||||||| | |||||||  ||||||||    
T  926606 agttttaatattatttttagtgaaatgaatctcaataataacaatttcaacacccaaaattattctaatttctcatttaactgcgaaaatctcaacaatt 926705  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  926706 atccaaatccaaatcaatttt 926726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 1987512 - 1987459
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtg 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1987512 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtg 1987459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 16218480 - 16218538
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacaccca 156  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  16218480 tgaagttttaatcttctttttagtgaattggatcccaataataatcctttcaacaccca 16218538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 17486171 - 17486112
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  17486171 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaa 17486112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 17928948 - 17929007
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  17928948 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaa 17929007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 36209203 - 36209262
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  36209203 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaa 36209262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 1072717 - 1072870
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||| |||||||||| ||||||||          ||||||||||||| |||| |||||||||||||||||||||||||        | |    
T  1072717 taaatagagacttggatcatttgatttggacacagagaaaaaaatcaagtttttcactctcttaatcttattattatctttctattagcttttcttttaa 1072816  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacaccc 155  Q
    ||||||| |||| | ||||||||||||||||||| ||| ||||| ||||||||||    
T  1072817 agttttagtctt-tatttagtgaaatggatcccactaacaatcaattcaacaccc 1072870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 6363719 - 6363615
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | |||||| |||||||||||||||||||||| |||||||||||||         ||||||||||||  ||| ||||| ||||||    
T  6363719 tgaagttttagtctt-tatttagtaaaatggatcccaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 6363621  T
Q  198 attatc 203  Q
    ||||||    
T  6363620 attatc 6363615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 7762923 - 7763027
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||||         ||||||||||||  ||| |||||| |||||    
T  7762923 tgaagttttagtctt-tgtttcgtgaaatggatcccaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatttcaaca 7763021  T
Q  198 attatc 203  Q
    ||||||    
T  7763022 attatc 7763027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 9118241 - 9118153
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagc 89  Q
    ||||||||||| ||| |||||||||| ||||||||         |||||||||||||| |||| || ||||||||||||||||||||||    
T  9118241 taaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactctcttaatattattattatctttctattagc 9118153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 1308422 - 1308481
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | |||||||||||| |||||||||||||||| |||||||||||||    
T  1308422 tgaagttttagtctt-tgtttagtgaaatgtatcccaataataatcaattcaacacccaaa 1308481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 4279405 - 4279363
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||| || |||||||||||| |||||||||||||    
T  4279405 tttagtgaaatggctcacaataataatcaattcaacacccaaa 4279363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 5145135 - 5145177
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||| |||| |||||||||||| |||||||||||||    
T  5145135 tttagtgaaatagatctcaataataatcaattcaacacccaaa 5145177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 22349670 - 22349712
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||    
T  22349670 tttagtgaaatggatcccactaacaatcaattcaacacccaaa 22349712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 43494974 - 43495016
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattag 88  Q
    ||||||||||||||||||  | |||||||||||||||||||||    
T  43494974 caagtttttcactatcttattgttattattatctttctattag 43495016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 9118139 - 9118099
Alignment:
Q  115 ttttagtgaaatggatcccaataataatcatttcaacaccc 155  Q
    |||||||||||||||||||| ||| ||||| ||||||||||    
T  9118139 ttttagtgaaatggatcccactaacaatcaattcaacaccc 9118099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 3e-72; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 25033603 - 25033383
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25033603 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 25033504  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||        |||||||||||||| ||||||||| |||||||||    
T  25033503 agttttaatcttatttctagtgaaatggatcccaataataaccatttcaacacccaaaaattttctaattacccatttaactacgaaaatcccaacaatt 25033404  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  25033403 atccaaatccaaatcaatttt 25033383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4580424 - 4580204
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||| |||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4580424 taaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 4580325  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||        |||||||||| ||| ||||||||| |||||||||    
T  4580324 agttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaaattttctaattacccatataactacgaaaatcccaacaatt 4580225  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  4580224 atccaaatccaaatcaatttt 4580204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 31011735 - 31011955
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||| |||||||||| ||||||||         |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31011735 taaatagagacttggatcatttgatttggacacagaaaaaaaaaccaaatttttcactatcttcatcttattattatctttctattagcaaactaagtga 31011834  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||        |||||||||| ||| ||||||||| |||||||||    
T  31011835 agttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatataactacgaaaatcccaacaatt 31011934  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  31011935 atccaaatccaaatcaatttt 31011955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 41152532 - 41152751
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         | |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41152532 taaatagagacttggttcatttgatttggacacagaaaaaaaaac-aagtttttcactatcttcatcttattattatccttctattagcaaactaagtga 41152630  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    | ||||||| ||||||||||||||||||||| ||||||||| |||||||||||| |||        |||||||||||||| |||| ||||||||||||||    
T  41152631 aattttaatattatttttagtgaaatggatctcaataataaccatttcaacacctaaaattattctaattacccatttaactacggaaattccaacaatt 41152730  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  41152731 atccaaatccaaatcaatttt 41152751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 7827481 - 7827310
Alignment:
Q  49 gtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcatttc 148  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  7827481 gtttttcactatcttaatcttattattatatttctattagcaaactaagtgaagttttaatcttatttttagtgaaat-gatctcaataataatcatttc 7827383  T
Q  149 aacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    ||||||||||        |||||||||||||| ||||||||| |||||||||||||||||| || ||||||||    
T  7827382 aacacccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttt 7827310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 56 - 221
Target Start/End: Complemental strand, 21367948 - 21367783
Alignment:
Q  56 actatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacaccc 155  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21367948 actatcttaatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaccc 21367849  T
Q  156 aaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    |||        |||||||||||||| ||  ||| | |||||||||||||||||| || ||||||||    
T  21367848 aaaattattctaattacccatttaactattaaattcccaacaattatccaaatccaaatcaatttt 21367783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 47 - 158
Target Start/End: Complemental strand, 41263800 - 41263689
Alignment:
Q  47 aagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcatt 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  41263800 aagtttttcactatcttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagttaaatggatcccaataataaccatt 41263701  T
Q  147 tcaacacccaaa 158  Q
    ||||||||||||    
T  41263700 tcaacacccaaa 41263689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 8176025 - 8176163
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||| ||| ||||||||         |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  8176025 taaatagagacttggttcatttaatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctttc-attagcaaactaagtga 8176123  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataata 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8176124 agttttaatcttatttttagtgaaatggatcccaataata 8176163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 25653239 - 25653100
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |  | ||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  25653239 taaatagagacttggttcatttgatttggacacagaaaaaaaaacataatttttcactattttaatcttattattatctttctattagcaaactaagtga 25653140  T
Q  101 agttttaatc---ttatttttagtgaaatggatcccaata 137  Q
    ||||||||||   || ||||||||||||||||||||||||    
T  25653139 agttttaatctttttttttttagtgaaatggatcccaata 25653100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 177473 - 177415
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacaccca 156  Q
    ||||||||||||||| ||||| || |||||||||||||||||||| |||||||||||||    
T  177473 tgaagttttaatcttctttttggtaaaatggatcccaataataataatttcaacaccca 177415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 25670549 - 25670653
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||         ||||||||||||  ||| ||||| ||||||    
T  25670549 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 25670647  T
Q  198 attatc 203  Q
    ||||||    
T  25670648 attatc 25670653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 36609937 - 36609884
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaac 151  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||| |||||||    
T  36609937 tgaagttttaatcttctttttagtgaaatggattccaataataatcctttcaac 36609884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 4219159 - 4219218
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  4219159 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaa 4219218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 15972918 - 15972862
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacc 154  Q
    ||||||||||| ||| |||||||||||||||||  ||||||||||||||||||||||    
T  15972918 tgaagttttaaacttctttttagtgaaatggatttcaataataatcatttcaacacc 15972862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 39008837 - 39008778
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  39008837 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaa 39008778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 203
Target Start/End: Original strand, 30644738 - 30644895
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||||||| | || |||||||||||| ||||||||||||        |||||||||| || | | ||||| ||||||||||||||||  |||||    
T  30644738 ccaagtttttcactcttttaatcttattattagctttctattagcttttcttttgaagttttagtc-tctatttagggaaatggatcccaataccaatca 30644836  T
Q  145 tttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatc 203  Q
     |||||||||||||        |||||||||||||  ||| ||||||||||||||||||    
T  30644837 attcaacacccaaaattcttctaattacccatttagctaccaaaattccaacaattatc 30644895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 220
Target Start/End: Original strand, 32363200 - 32363321
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| ||||||||| |||         ||||||||||||  ||| ||||| ||||||    
T  32363200 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacctaaaattcttctgattacccatttagctaccaaaatcccaaca 32363298  T
Q  198 attatccaaatctaattcaattt 220  Q
    |||||| | | |||| |||||||    
T  32363299 attatcaacacctaaatcaattt 32363321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 27405927 - 27406031
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | ||||||||||||||||||||||| ||||| |||||||||||||         ||||||||||||  ||| ||||| ||||||    
T  27405927 tgaagttttagtctt-tatttagtgaaatggatcccaataacaatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 27406025  T
Q  198 attatc 203  Q
    ||||||    
T  27406026 attatc 27406031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 13479337 - 13479396
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | |||||| |||||||||||||||||||||| |||||||||||||    
T  13479337 tgaagttttagtctt-tgtttagtaaaatggatcccaataataatcaattcaacacccaaa 13479396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 23089863 - 23089804
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | |||| |||||||||||||||||||||||| |||||||||||||    
T  23089863 tgaagttttagtctt-tgtttattgaaatggatcccaataataatcaattcaacacccaaa 23089804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 34529114 - 34529157
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagc 89  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  34529114 caagtttttcactatcttaatcttgttattatctttctattagc 34529157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 8681014 - 8681056
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctatta 87  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  8681014 ccaagtttttcactatcttaatcttgttattatctttctatta 8681056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 39238857 - 39238815
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  39238857 tttagtaaaatggatcccaataataatcaattcaacacccaaa 39238815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 27407474 - 27407512
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttcta 84  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  27407474 caagtttttcactatcttaatcttgttattatctttcta 27407512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 29616260 - 29616302
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||    
T  29616260 tttagtgaaatggatcccactaacaatcaattcaacacccaaa 29616302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 36572153 - 36572209
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacaccc 155  Q
    |||||||||| |||| | ||||||||||||||||||| ||| ||||| ||||||||||    
T  36572153 tgaagttttagtctt-tatttagtgaaatggatcccactaacaatcaattcaacaccc 36572209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 42804527 - 42804631
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | |||||||||||||||| || ||| ||||| |||||||||||||         ||||||| ||||| ||| ||||| ||||||    
T  42804527 tgaagttttagtctt-tatttagtgaaatggatctcactaacaatcaattcaacacccaaaattcttctgattacccttttaactaccaaaatcccaaca 42804625  T
Q  198 attatc 203  Q
    ||||||    
T  42804626 attatc 42804631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 134; Significance: 7e-70; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 46914195 - 46914415
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  46914195 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctttctattagcaaactaagtga 46914294  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||        |||||||||||||| ||||||||| |||||||||    
T  46914295 agttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaattattctaattacccatttaactacgaaaatcccaacaatt 46914394  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  46914395 atccaaatccaaatcaatttt 46914415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 2212001 - 2212221
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  2212001 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaaatttttcactatcttcttcttattattatctttctattagcaaactaattga 2212100  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||        |||||||||||||| ||||||||| |||||||||    
T  2212101 agttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaattattctaattacccatttaactacgaaaatcccaacaatt 2212200  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  2212201 atccaaatccaaatcaatttt 2212221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 47749733 - 47749941
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47749733 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 47749832  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| || |||||||||||||||||||  |||||||||||||||        |||||||||||||| ||||||||| |||||||||    
T  47749833 agttttaatcttattttttgtaaaatggatcccaataataactatttcaacacccaaaaattttctaattacccatttaactacgaaaatcccaacaatt 47749932  T
Q  201 atccaaatc 209  Q
    |||||||||    
T  47749933 atccaaatc 47749941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 53181137 - 53181357
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| | | |||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53181137 taaatagagactttgatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 53181236  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||        |||||||||| ||| ||||||||| |||||||||    
T  53181237 agttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatataactacgaaaatcccaacaatt 53181336  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  53181337 atccaaatccaaatcaatttt 53181357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 36658857 - 36658637
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||  |||||||||||||| ||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36658857 taaatagagatttggttcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 36658758  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||        |||||| ||||||| ||||||||| | |||||||    
T  36658757 agttttaatcttatttttagtgaaatggatcgcaataataaccatttcaacacccaaaattattctaattactcatttaactacgaaaatccaaacaatt 36658658  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  36658657 atccaaatccaaatcaatttt 36658637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 46 - 221
Target Start/End: Original strand, 21654553 - 21654728
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcat 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  21654553 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccat 21654652  T
Q  146 ttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    |||||||||||||        |||||||||| ||| ||||||||| |||||||||||| ||||| || ||||||||    
T  21654653 ttcaacacccaaaaattttctaattacccatataactacgaaaatcccaacaattatctaaatccaaatcaatttt 21654728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 2 - 209
Target Start/End: Complemental strand, 19409896 - 19409689
Alignment:
Q  2 aaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaa 101  Q
    |||||||||| |||||||||||||| |||||||           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19409896 aaatagagacttggttcatttgatttggacacaaaaaaaaaaatcaagtttttcactatcttaatcttattattatctttctattagcaaactaagtgaa 19409797  T
Q  102 gttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatta 201  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||        |||||| ||||||| ||||||||| ||||||||||    
T  19409796 gttttaattttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattactcatttaactacgaaaatcccaacaatta 19409697  T
Q  202 tccaaatc 209  Q
    ||||||||    
T  19409696 tccaaatc 19409689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 27141870 - 27142023
Alignment:
Q  5 tagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagtt 104  Q
    ||||||| |||||||||||||| ||||||||         |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  27141870 tagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctttctattagcaaactaagtgaaatt 27141969  T
Q  105 ttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  27141970 ttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaa 27142023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 7401550 - 7401442
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  7401550 ccaagtttttcactatcttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataacca 7401451  T
Q  145 tttcaacac 153  Q
    |||||||||    
T  7401450 tttcaacac 7401442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 10090168 - 10090033
Alignment:
Q  2 aaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaa 101  Q
    |||||||||| |||||||||||||| ||||| ||         |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10090168 aaatagagacttggttcatttgatttggacatagaaaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagcaaattaagtgaa 10090069  T
Q  102 gttttaatcttatttttagtgaaatggatcccaata 137  Q
    ||||||||||||||||| ||||||||||||||||||    
T  10090068 gttttaatcttattttttgtgaaatggatcccaata 10090033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 40596419 - 40596535
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40596419 taaatagagacttggttcatttgatttggacacaggaaaaaaa-ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 40596517  T
Q  101 agttttaatcttattttt 118  Q
    | ||||||||||||||||    
T  40596518 aattttaatcttattttt 40596535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 45 - 156
Target Start/End: Original strand, 39048751 - 39048862
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    ||||||||||||||||||| ||||||| ||||| ||| ||||||         ||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  39048751 ccaagtttttcactatcttaatcttatcattatatttttattagattttcttttgaagttttaaacttctttttagtgaaatggatctcaataataatca 39048850  T
Q  145 tttcaacaccca 156  Q
    ||||||||||||    
T  39048851 tttcaacaccca 39048862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 203
Target Start/End: Original strand, 23539370 - 23539527
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||||||| |||| |||||||||||| ||||||||||||        |||||||||| |||| | ||||||||||||||||||| ||| |||||    
T  23539370 ccaagtttttcactctcttaatcttattattagctttctattagcttttcttttgaagttttagtctt-tatttagtgaaatggatcccagtaacaatca 23539468  T
Q  145 tttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatc 203  Q
     |||||||||||||         ||||||||||||| ||| ||||| ||||||||||||    
T  23539469 attcaacacccaaaattcttcttattacccatttaactaccaaaatcccaacaattatc 23539527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 31848516 - 31848563
Alignment:
Q  69 tattattatctttctattagcaaactaagtgaagttttaatcttattt 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  31848516 tattattatctttcgattagcaaactaagtgaagttttaatcttattt 31848563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 34434284 - 34434343
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  34434284 tgaagttttagtctt-tatttagtgaaatggatcccaataataatcaattcaacacccaaa 34434343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 55408222 - 55408309
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattag 88  Q
    ||||||||||| |||||||||||||| ||||||||         ||||||||||||||||||| ||||||  ||||||||||||||||    
T  55408222 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttaatcttaagattatctttctattag 55408309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 28447548 - 28447506
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  28447548 tttagtgaaatggatcccaataataatcaattcaacacccaaa 28447506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 220
Target Start/End: Complemental strand, 33607337 - 33607216
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | |||||||||||||||| |||||||||||| |||||||||||||         ||||||||||||  ||| ||||| ||||||    
T  33607337 tgaagttttagtctt-tgtttagtgaaatggatctcaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 33607239  T
Q  198 attatccaaatctaattcaattt 220  Q
    |||||| | | |||| |||||||    
T  33607238 attatcaacacctaaatcaattt 33607216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 48506250 - 48506338
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagc 89  Q
    ||||||||||| ||| |||||||||| ||||||||         |||||||||||||| |||| || ||||||||||||||||||||||    
T  48506250 taaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactctcttaatattattattatctttctattagc 48506338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 4981990 - 4981931
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| || ||||||||||    
T  4981990 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaa 4981931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 27864234 - 27864175
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | |||||| |||||||||||||||||||||| |||||||||||||    
T  27864234 tgaagttttagtctt-tgtttagtaaaatggatcccaataataatcaattcaacacccaaa 27864175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 28901275 - 28901216
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||| ||||| |||||||||||||    
T  28901275 tgaagttttagtctt-tatttagtgaaatggatcccaataacaatcaattcaacacccaaa 28901216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 203
Target Start/End: Complemental strand, 28901488 - 28901331
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||||||| |||| |||||||||||| |||||||||||         |||||||||| |||| | ||||||||||| ||| ||||||| |||||    
T  28901488 ccaagtttttcactctcttaatcttattattagctttctattagtttttcttttgaagttttagtctt-tatttagtgaaattgattccaataacaatca 28901390  T
Q  145 tttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatc 203  Q
     |||||||||||||         ||||||||||||  ||| ||||| ||||||||||||    
T  28901389 attcaacacccaaaattcttctgattacccatttagctaccaaaatcccaacaattatc 28901331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 13093905 - 13093964
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | |||| | |||||||||||||||||||||| |||||||||||||    
T  13093905 tgaagttttagtctt-tgtttaataaaatggatcccaataataatcaattcaacacccaaa 13093964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 17329647 - 17329706
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | |||||||||||| |||| ||||||||||| |||||||||||||    
T  17329647 tgaagttttagtctt-tgtttagtgaaatgaatccaaataataatcaattcaacacccaaa 17329706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 158
Target Start/End: Original strand, 34463238 - 34463349
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcat 145  Q
    ||||||||||||| |||| |||||||||||| |||| |||||||        |||||||||| | || | ||||||||||||||||||| ||| |||||     
T  34463238 caagtttttcactctcttaatcttattattagctttgtattagcctttcttttgaagttttagtgtt-tatttagtgaaatggatcccactaacaatcaa 34463336  T
Q  146 ttcaacacccaaa 158  Q
    |||||||||||||    
T  34463337 ttcaacacccaaa 34463349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 35809720 - 35809661
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | |||| | |||||||||||||||||||||| |||||||||||||    
T  35809720 tgaagttttagtctt-tgtttaataaaatggatcccaataataatcaattcaacacccaaa 35809661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 3530027 - 3530069
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||    
T  3530027 tttagtgaaatggatcccactaacaatcaattcaacacccaaa 3530069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 8995057 - 8995015
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||    
T  8995057 tttagtgaaatggatcccactaacaatcaattcaacacccaaa 8995015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 13113835 - 13113793
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||    
T  13113835 tttagtgaaatggatcccactaacaatcaattcaacacccaaa 13113793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 16171653 - 16171695
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||    
T  16171653 tttagtgaaatggatcccactaacaatcaattcaacacccaaa 16171695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 19273227 - 19273185
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||| ||||| |||||||||||||||| |||||||||||||    
T  19273227 tttagtaaaatgaatcccaataataatcaattcaacacccaaa 19273185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 34199027 - 34199069
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||    
T  34199027 tttagtgaaatggatcccactaacaatcaattcaacacccaaa 34199069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 48403661 - 48403703
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||| |||||||||||||||||||||| ||||||| |||||    
T  48403661 tttagtaaaatggatcccaataataatcaattcaacatccaaa 48403703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 53347430 - 53347537
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatccc---aataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattcca 194  Q
    |||||||||| |||| | ||||||||||||||||||   ||||||||||| |||||||||||||         |||| |||||||| ||| ||||| |||    
T  53347430 tgaagttttagtctt-tatttagtgaaatggatcccaataataataatcaattcaacacccaaaattcttctgattatccatttaactaccaaaatccca 53347528  T
Q  195 acaattatc 203  Q
    |||||||||    
T  53347529 acaattatc 53347537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 56054556 - 56054514
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||    
T  56054556 tttagtgaaatggatcccactaacaatcaattcaacacccaaa 56054514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 56054622 - 56054581
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctatt 86  Q
    |||||||||||||| |||| |||||||||||| |||||||||    
T  56054622 ccaagtttttcactctcttaatcttattattagctttctatt 56054581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 45081220 - 45081263
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataat 142  Q
    |||||||||| |||| | |||||||||||||||||||||||||||    
T  45081220 tgaagttttagtctt-tgtttagtgaaatggatcccaataataat 45081263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 48506352 - 48506392
Alignment:
Q  115 ttttagtgaaatggatcccaataataatcatttcaacaccc 155  Q
    |||||||||||||||||||| ||| ||||| ||||||||||    
T  48506352 ttttagtgaaatggatcccactaacaatcaattcaacaccc 48506392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 52773262 - 52773218
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagca 90  Q
    ||||||||||||| |||| |||||||||||| |||| ||||||||    
T  52773262 caagtttttcactctcttaatcttattattagctttgtattagca 52773218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 7e-70; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 17469831 - 17469611
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17469831 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctttctattagcaaactaagtga 17469732  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||        |||||||||||||| ||||||||| |||||||||    
T  17469731 agttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaattattctaattacccatttaactacgaaaatcccaacaatt 17469632  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  17469631 atccaaatccaaatcaatttt 17469611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 25787414 - 25787634
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||| |||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25787414 taaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 25787513  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||        |||||||||| ||| ||||||||| |||||||||    
T  25787514 agttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatataactacgaaaatcccaacaatt 25787613  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  25787614 atccaaatccaaatcaatttt 25787634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 25829371 - 25829591
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||| |||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25829371 taaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 25829470  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||        |||||||||| ||| ||||||||| |||||||||    
T  25829471 agttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatataactacgaaaatcccaacaatt 25829570  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  25829571 atccaaatccaaatcaatttt 25829591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 47147688 - 47147468
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  47147688 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctttctattagcaaactaattga 47147589  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||        |||||||||||||| ||||||||| |||||||||    
T  47147588 agttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaattattctaattacccatttaactacgaaaatcccaacaatt 47147489  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  47147488 atccaaatccaaatcaatttt 47147468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 42598069 - 42598289
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||| |||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42598069 taaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 42598168  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||        |||||||||| ||| ||||||||| |||||| ||    
T  42598169 agttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatataactacgaaaatcccaacattt 42598268  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  42598269 atccaaatccaaatcaatttt 42598289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 5844677 - 5844884
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5844677 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctttctattagcaaactaagtga 5844776  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||        |||||||||||||| ||||||||| |||||||||    
T  5844777 aattttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaattattctaattacccatttaactacgaaaatcccaacaatt 5844876  T
Q  201 atccaaat 208  Q
    ||||||||    
T  5844877 atccaaat 5844884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 46 - 221
Target Start/End: Complemental strand, 49086507 - 49086332
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcat 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  49086507 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaccat 49086408  T
Q  146 ttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    |||||||||||||        ||||| |||||||| ||||||||| |||||||||||||||||  || ||||||||    
T  49086407 ttcaacacccaaaattattctaattatccatttaactacgaaaatcccaacaattatccaaattcaaatcaatttt 49086332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 50020369 - 50020193
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  50020369 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtaaaat-gatcccaataataatca 50020271  T
Q  145 tttc-aacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    |||| ||||||||||        |||||||||||||| |||||||||||||||||||||||||||| || ||||||||    
T  50020270 tttcaaacacccaaaattattctaattacccatttaactacgaaaattccaacaattatccaaatccaaatcaatttt 50020193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 51435997 - 51435821
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  51435997 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataacca 51435898  T
Q  145 tttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    | ||||||||||||        |||||||||| ||| ||||||||| |||||||||||||||||| || ||||||||    
T  51435897 tctcaacacccaaaaattttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 51435821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 33751682 - 33751519
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcat 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||    
T  33751682 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaaattttaatcttattttttgtgaaatggatcccaataataaccat 33751583  T
Q  146 ttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatc 209  Q
    |||||||||||||        |||||||||||||| ||||||||| ||||||||||||||||||    
T  33751582 ttcaacacccaaaaattttctaattacccatttaactacgaaaatcccaacaattatccaaatc 33751519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 49822647 - 49822823
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  49822647 ccaagtttttcactatcttcgtattattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatctcaataataatca 49822746  T
Q  145 tttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    ||||||||||||||        |||||||||| ||| ||||||||| |||||||||||||||||| || ||||||||    
T  49822747 tttcaacacccaaaatttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 49822823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 25450139 - 25450296
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  25450139 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatcttcctattagcaaactaagtga 25450238  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25450239 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 25450296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 46 - 200
Target Start/End: Original strand, 30688605 - 30688759
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcat 145  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  30688605 caagtttttcactatcttaatcttattattatttttctattagcaaactaagtgaagttttaatcttatttttaatgaaatggatcccaataataaccat 30688704  T
Q  146 ttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||        |||||||||||||| |||||||||||||||||||    
T  30688705 ttcaacacccaaaattattctaattacccatttaactacgaaaattccaacaatt 30688759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 46 - 221
Target Start/End: Complemental strand, 50034660 - 50034485
Alignment:
Q  46 caagtttttcactatcttcatcttattattatcttt-ctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  50034660 caagtttttcactatcttcatcttattattatcttttctattagcaaactaagtgaagttttaatcttatttttagttaaatggatcccaataataacca 50034561  T
Q  145 tttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    ||||||||||||||        || ||||||||||| ||||||||| ||||||| |||||||||  || ||||||||    
T  50034560 tttcaacacccaaaattattctaactacccatttaactacgaaaatcccaacaa-tatccaaattcaaatcaatttt 50034485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 66 - 221
Target Start/End: Complemental strand, 33936537 - 33936382
Alignment:
Q  66 tcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnn 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||           
T  33936537 tcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaaattttc 33936438  T
Q  166 naattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
     |||||||||| ||| ||||||||| |||||||||||||||||| || ||||||||    
T  33936437 taattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 33936382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 51 - 221
Target Start/End: Complemental strand, 42602235 - 42602065
Alignment:
Q  51 ttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaa 150  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||    
T  42602235 ttttcactatcttcattttattattatctttatattagcaaactaagtgaagttttaatcttatttttagtgaaatagatcccaataataaccattttaa 42602136  T
Q  151 cacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    ||||||||        |||||||||||||| || |||||| | |||||||||||||||| || ||||||||    
T  42602135 cacccaaaattattctaattacccatttaactatgaaaatcctaacaattatccaaatccaaatcaatttt 42602065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 37410143 - 37410279
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||| ||| ||||||||         ||||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  37410143 taaatagagacttggttcatttaatttggacacagaaaaaaaaaccaagtttttcactatcttc---ttattattatctttctattagcaaactaagtga 37410239  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataata 140  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37410240 agttttaatcttatttttagtgaaatggatcccaataata 37410279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 49356997 - 49357088
Alignment:
Q  50 tttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataa 141  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49356997 tttttcactatcctcatcttattattatctttctattcgcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataa 49357088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 15493530 - 15493590
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||    
T  15493530 tgaagttttaatcttctttttagtgaaatagattccaataataatcatttcaacacccaaa 15493590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 21229361 - 21229420
Alignment:
Q  99 gaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  21229361 gaagttttaatcttctttttagtgaaatgaatcccaataataatcctttcaacacccaaa 21229420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 221
Target Start/End: Complemental strand, 21228435 - 21228317
Alignment:
Q  103 ttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattat 202  Q
    |||||||||| |||||||||||||||||||||||||||||  |||||||||||| |        |||||| ||||||  ||| ||||| |||||||||||    
T  21228435 ttttaatcttctttttagtgaaatggatcccaataataattttttcaacacccataattcttctaattacgcatttagctaccaaaatcccaacaattat 21228336  T
Q  203 ccaaatctaattcaatttt 221  Q
    | ||||| || ||||||||    
T  21228335 caaaatccaaatcaatttt 21228317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 153
Target Start/End: Original strand, 47700694 - 47700749
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacac 153  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||    
T  47700694 tgaagttttaaacttctttttagtgaaatggattccaataataatcatttcaacac 47700749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 46572614 - 46572702
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagc 89  Q
    ||||||||||| |||||||||||||| |||||||          ||||||||||||||||||| ||||| |||||||||||||||||||    
T  46572614 taaatagagacttggttcatttgatttggacacaaaaaaaaaaaccaagtttttcactatcttaatcttgttattatctttctattagc 46572702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 35852897 - 35852984
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattag 88  Q
    ||||||||||| |||||||||||||| ||||||||         ||||||||||||||||||| ||||||  ||||||||||||||||    
T  35852897 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttaatcttaagattatctttctattag 35852984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 221
Target Start/End: Complemental strand, 12975159 - 12975037
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| || ||||||||||         ||||||||||||  ||| ||||| ||||||    
T  12975159 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 12975061  T
Q  198 attatccaaatctaattcaatttt 221  Q
    |||||| | | |||| ||||||||    
T  12975060 attatcaacacctaaatcaatttt 12975037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 209
Target Start/End: Complemental strand, 51974558 - 51974448
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||||| || |||| |||||||||||||| ||||||||||||||||||||||| |        |||||||||||||  ||| |||||  |||||    
T  51974558 tgaagttttaatattcttttcagtgaaatggatcc-aataataatcatttcaacacccagaattcttttaattacccatttagctaccaaaatctcaaca 51974460  T
Q  198 attatccaaatc 209  Q
    |||||| |||||    
T  51974459 attatcaaaatc 51974448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 11908366 - 11908309
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacaccca 156  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||    
T  11908366 tgaagttttagtctt-tctttagtgaaatggatcccaataataatcaattcaacaccca 11908309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 48886572 - 48886676
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | ||||||||||||||| ||||||||||||| |||||||||||||         ||||||||||||  ||| ||||| ||||||    
T  48886572 tgaagttttagtctt-tgtttagtgaaatggattccaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 48886670  T
Q  198 attatc 203  Q
    ||||||    
T  48886671 attatc 48886676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 20139876 - 20139817
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||| | |||||||||||||    
T  20139876 tgaagttttagtctt-tatttagtgaaatggatcccaataataattaattcaacacccaaa 20139817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 33187852 - 33187911
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||| ||||| |||||||||||||    
T  33187852 tgaagttttagtctt-tatttagtgaaatggatcccaataaaaatcaattcaacacccaaa 33187911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 35472057 - 35472116
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| || ||||||||||    
T  35472057 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaa 35472116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 49027159 - 49027218
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||| ||||||||||| |||||||||||||    
T  49027159 tgaagttttagtctt-tgtttagtgaaatggatcctaataataatcaattcaacacccaaa 49027218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 51304888 - 51304829
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | |||||| |||||||||||||||||||||| |||||||||||||    
T  51304888 tgaagttttagtctt-tgtttagtaaaatggatcccaataataatcaattcaacacccaaa 51304829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 51999809 - 51999868
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| ||||| |||||||    
T  51999809 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaatacccaaa 51999868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 33795179 - 33795252
Alignment:
Q  13 tggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctatt 86  Q
    |||||||||||||| ||||||||         ||||||||||||||||||| || |||||||||||||||||||    
T  33795179 tggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttaattttattattatctttctatt 33795252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 155
Target Start/End: Complemental strand, 55027135 - 55027026
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||||||| |||| || ||||||||||||||||||||||        | |||||||| |||| | ||||||||||||||||||| ||| |||||    
T  55027135 ccaagtttttcactctcttaatattattattatctttctattagcttttcttttaaagttttagtctt-tatttagtgaaatggatcccactaacaatca 55027037  T
Q  145 tttcaacaccc 155  Q
     ||||||||||    
T  55027036 attcaacaccc 55027026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 28410809 - 28410721
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnn-ccaagtttttcactatcttcatcttattattatctttctattag 88  Q
    ||||||||||| |||||||||||||| ||||||||          ||||||||||||||||||| ||||||  ||||||||||||||||    
T  28410809 taaatagagacttggttcatttgatttggacacagaaaaaaaaaaccaagtttttcactatcttaatcttaagattatctttctattag 28410721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 26162279 - 26162334
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacc 154  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| || ||||||    
T  26162279 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacc 26162334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 31170006 - 31170065
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | |||||||||||| |||||||||||||||| ||||||| |||||    
T  31170006 tgaagttttagtctt-tgtttagtgaaatgaatcccaataataatcaattcaacagccaaa 31170065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 35540309 - 35540368
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||| | |||||||||||| ||| |||||||||||| ||||||| |||||    
T  35540309 tgaagttttaatctt-tatttagtgaaatgaatctcaataataatcaattcaacatccaaa 35540368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 158
Target Start/End: Complemental strand, 42564317 - 42564206
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcat 145  Q
    ||||||||||||| |||| |||||||||||| |||| |||||||        |||||||||| | || | ||||||||||||||||||| ||| |||||     
T  42564317 caagtttttcactctcttaatcttattattagctttgtattagcctttcttttgaagttttagtgtt-tatttagtgaaatggatcccactaacaatcaa 42564219  T
Q  146 ttcaacacccaaa 158  Q
    |||||||||||||    
T  42564218 ttcaacacccaaa 42564206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 6832922 - 6832883
Alignment:
Q  119 agtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  6832922 agtgaaatggattccaataataatcaattcaacacccaaa 6832883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 6045100 - 6045142
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||    
T  6045100 tttagtgaaatggatcccactaacaatcaattcaacacccaaa 6045142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 7008482 - 7008440
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctatta 87  Q
    |||||||||||||| |||| |||||||||||| ||||||||||    
T  7008482 ccaagtttttcactctcttaatcttattattagctttctatta 7008440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 46137012 - 46137057
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||| |||| | |||||||||||||||||||||||||||||    
T  46137012 tgaagttttagtctt-tatttagtgaaatggatcccaataataatca 46137057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 50415566 - 50415608
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||    
T  50415566 tttagtgaaatggatcccactaacaatcaattcaacacccaaa 50415608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 38571902 - 38571958
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacaccc 155  Q
    |||||||||| |||| | ||||||||||||||||||| ||| ||||| ||||||||||    
T  38571902 tgaagttttagtctt-tatttagtgaaatggatcccactaacaatcaattcaacaccc 38571958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 4046491 - 4046447
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagca 90  Q
    ||||||||||||| |||| |||||||||||| |||| ||||||||    
T  4046491 caagtttttcactctcttaatcttattattagctttgtattagca 4046447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 7520829 - 7520869
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctatt 86  Q
    ||||||| |||||||||| |||||||||||||| |||||||    
T  7520829 caagtttgtcactatcttaatcttattattatccttctatt 7520869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 36178222 - 36178277
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacc 154  Q
    |||||||||| |||| | |||||| ||||||||| |||||||||||| |||||||||    
T  36178222 tgaagttttagtctt-tgtttagtaaaatggatctcaataataatcaattcaacacc 36178277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 2e-67; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 8449691 - 8449911
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||          ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8449691 taaatagagacttggttcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcttcttattattatctttctattagcaaactaagtga 8449790  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||        |||||||||||||| ||||||||| |||||||||    
T  8449791 agttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaattattctaattacccatttaactacgaaaatcccaacaatt 8449890  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  8449891 atccaaatccaaatcaatttt 8449911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 36912983 - 36912775
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||| ||| ||||||||         |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  36912983 taaatagagacttggttcatttaatttggacacagaaaaaaaaaccaagtttttcactatattcttcttattattatctttctattagcaaactaagtga 36912884  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||        |||||||||||||| ||||||||| |||||||||    
T  36912883 agttttaatcttatttttagtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactacgaaaatcccaacaatt 36912784  T
Q  201 atccaaatc 209  Q
    |||||||||    
T  36912783 atccaaatc 36912775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 13817466 - 13817246
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||| |||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13817466 taaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 13817367  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||        ||||| |||| ||| || |||||| |||||||||    
T  13817366 agttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattatccatataactatgaaaatcccaacaatt 13817267  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  13817266 atccaaatccaaatcaatttt 13817246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 35101768 - 35101592
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  35101768 ccaagtttttcaccatcttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataacca 35101669  T
Q  145 tttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    |||||||| |||||        |||||||||||||| ||||||||| |||||||||||||||||| || ||||||||    
T  35101668 tttcaacaaccaaaattattctaattacccatttaactacgaaaatcccaacaattatccaaatccaaatcaatttt 35101592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 5214212 - 5213992
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||| |||||||||| ||||||||         |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5214212 taaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagcaaattaagtga 5214113  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||        |||||||||| ||| ||||||||| |||||||||    
T  5214112 agttttaatcttattttttgtgaaatcgatcccaataataaccatctcaacacccaaaaaaattttaattacccatataactacgaaaatcccaacaatt 5214013  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  5214012 atccaaatccaaatcaatttt 5213992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 26748616 - 26748836
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||          ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26748616 taaatagagacttggttcatttgatttggacacagaaaaaaaaaacaaatttttcactatcttcatcttattattatatttctattagcaaactaagtga 26748715  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||        |||||||||||||| |  |||||| |||||||||    
T  26748716 agttttaatcttattttttgtgacatggatcccaataataaccatttcaacacccaaattttttctaattacccatttaactttgaaaatcccaacaatt 26748815  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  26748816 atccaaatccaaatcaatttt 26748836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 34954990 - 34955198
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  34954990 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttattcttattattatctttctattagcaaactaagtga 34955089  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||  | ||||        | |||||||||||| ||||||||| |||||||||    
T  34955090 agttttaatgttatttttagtgaaatggatcccaataacaaccatttcaatcctcaaaattattctagttacccatttaactacgaaaatcccaacaatt 34955189  T
Q  201 atccaaatc 209  Q
    |||||||||    
T  34955190 atccaaatc 34955198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 46 - 221
Target Start/End: Complemental strand, 17744948 - 17744773
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcat 145  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||| |||    
T  17744948 caagtttttcaatatcttaatcttattattatctttctattagcaaactaagtgaagttttaatctaatttttattgaaattgatcccaataataaccat 17744849  T
Q  146 ttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    |||||||||||||        ||| |  ||||||| ||||||||| |||||||||||||||||| || ||||||||    
T  17744848 ttcaacacccaaaattattctaataattcatttaactacgaaaatcccaacaattatccaaatccaaatcaatttt 17744773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 18029047 - 18029160
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  18029047 ccaagtttttcactatctttttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatctcaataataacca 18029146  T
Q  145 tttcaacacccaaa 158  Q
    ||||||||||||||    
T  18029147 tttcaacacccaaa 18029160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 43617929 - 43618042
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  43617929 ccaagtttttcactatcttcttcttattattatctttctattagcaaactaattgaagttttaatcttatttttagtgaaatggatcccaataataacca 43618028  T
Q  145 tttcaacacccaaa 158  Q
    |||||||| |||||    
T  43618029 tttcaacaaccaaa 43618042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 4625182 - 4625319
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         ||||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  4625182 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttc---ttattattatctttctattagcaaactaagtga 4625278  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataa 141  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4625279 agttttaatcttatttttagtgaaatggatcccaataataa 4625319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 66 - 221
Target Start/End: Complemental strand, 5736379 - 5736224
Alignment:
Q  66 tcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnn 165  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||  ||||||           
T  5736379 tcttattattatctttctattaggaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataacaaccatttcaatccccaaaattattc 5736280  T
Q  166 naattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
     | |||||||||||| ||||||||||||||||||||||| |||| || ||||||||    
T  5736279 tagttacccatttaactacgaaaattccaacaattatcccaatccaaatcaatttt 5736224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 26414574 - 26414466
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||| | ||    
T  26414574 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttcaacgaaatggatcccaataattacca 26414475  T
Q  145 tttcaacac 153  Q
    |||||||||    
T  26414474 tttcaacac 26414466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 26631810 - 26631926
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26631810 taaatagagacttggttcatttgatttggacacaggaaaaaaa-ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 26631908  T
Q  101 agttttaatcttattttt 118  Q
    | ||||||||||||||||    
T  26631909 aattttaatcttattttt 26631926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 30470476 - 30470592
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30470476 taaatagagacttggttcatttgatttggacacaggaaaaaaa-ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 30470574  T
Q  101 agttttaatcttattttt 118  Q
    | ||||||||||||||||    
T  30470575 aattttaatcttattttt 30470592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 42861067 - 42860996
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42861067 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattt 42860996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 17494306 - 17494409
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcat 145  Q
    |||||||||||||||||| |||||||||||||| ||||||||||   ||   ||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  17494306 caagtttttcactatcttaatcttattattatccttctattagctttcttt-tgaagttttaaacttctttttagtgaaatgaatcccaataataatcat 17494404  T
Q  146 ttcaa 150  Q
    |||||    
T  17494405 ttcaa 17494409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 221
Target Start/End: Complemental strand, 27392773 - 27392671
Alignment:
Q  119 agtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaat 218  Q
    ||||||||||||||||||||||| ||||||||||||||||        |||||||||||||| ||| ||||| |||||||||||| ||||| || |||||    
T  27392773 agtgaaatggatcccaataataaccatttcaacacccaaaattattctaattacccatttaactaccaaaatcccaacaattatcaaaatccaaatcaat 27392674  T
Q  219 ttt 221  Q
    |||    
T  27392673 ttt 27392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 231721 - 231620
Alignment:
Q  51 ttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaa 150  Q
    ||||||||||||| |||||||||||||| ||||||||||        ||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||    
T  231721 ttttcactatcttaatcttattattatccttctattagcttttattttgaagttttaaacttctttttagtgaaatgaatccctataataatcatttcaa 231622  T
Q  151 ca 152  Q
    ||    
T  231621 ca 231620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 708132 - 708031
Alignment:
Q  51 ttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaa 150  Q
    ||||||||||||| |||||||||||||| ||||||||||        ||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||    
T  708132 ttttcactatcttaatcttattattatccttctattagcttttattttgaagttttaaacttctttttagtgaaatgaatccctataataatcatttcaa 708033  T
Q  151 ca 152  Q
    ||    
T  708032 ca 708031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 745344 - 745243
Alignment:
Q  51 ttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaa 150  Q
    ||||||||||||| |||||||||||||| ||||||||||        ||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||    
T  745344 ttttcactatcttaatcttattattatccttctattagcttttattttgaagttttaaacttctttttagtgaaatgaatccctataataatcatttcaa 745245  T
Q  151 ca 152  Q
    ||    
T  745244 ca 745243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 869239 - 869138
Alignment:
Q  51 ttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaa 150  Q
    ||||||||||||| |||||||||||||| ||||||||||        ||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||    
T  869239 ttttcactatcttaatcttattattatccttctattagcttttattttgaagttttaaacttctttttagtgaaatgaatccctataataatcatttcaa 869140  T
Q  151 ca 152  Q
    ||    
T  869139 ca 869138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 13947791 - 13947687
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| ||||||||| |||         ||||||||||||  ||| ||||| ||||||    
T  13947791 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacaccaaaaattcttctgattacccatttagctaccaaaatcccaaca 13947693  T
Q  198 attatc 203  Q
    ||||||    
T  13947692 attatc 13947687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 23550052 - 23550011
Alignment:
Q  117 ttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  23550052 ttagtgaaatggatcccaataataatcaattcaacacccaaa 23550011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 29732011 - 29731952
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| || ||||||||||    
T  29732011 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaa 29731952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 30529389 - 30529448
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | || |||||||||||||||||||||||||| |||||||||||||    
T  30529389 tgaagttttagtctt-tattaagtgaaatggatcccaataataatcaattcaacacccaaa 30529448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 44150227 - 44150168
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | |||| |||||||||||||||||||||||| |||||||||||||    
T  44150227 tgaagttttagtctt-tgtttattgaaatggatcccaataataatcaattcaacacccaaa 44150168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 44503591 - 44503532
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||||| || | |||||||||||||||| |||||||||||| |||||||||||||    
T  44503591 tgaagttttaatatt-tgtttagtgaaatggatctcaataataatcaattcaacacccaaa 44503532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41477613 - 41477527
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctatta 87  Q
    ||||||||||| ||||| ||||||||  |||||||         |||||||||| |||||||| |||||||||||||||||||||||    
T  41477613 taaatagagacttggtttatttgatttagacacagaaaaaaaatccaagttttttactatcttaatcttattattatctttctatta 41477527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 155
Target Start/End: Original strand, 12272159 - 12272268
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||||||| |||| || ||||||||||||||||||||||        | |||||||| |||| | ||||||||||||||||||| ||| |||||    
T  12272159 ccaagtttttcactctcttaatattattattatctttctattagcttttcttttaaagttttagtctt-tatttagtgaaatggatcccactaacaatca 12272257  T
Q  145 tttcaacaccc 155  Q
     ||||||||||    
T  12272258 attcaacaccc 12272268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 13783949 - 13783987
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacc 154  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  13783949 tttagtgaaatggatcccaataataatcaattcaacacc 13783987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 26244940 - 26244898
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  26244940 tttagtaaaatggatcccaataataatcaattcaacacccaaa 26244898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 43524008 - 43524050
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||| ||||||||||||||||| |||||||||||||    
T  43524008 tttagtgaaatagatcccaataataatcaattcaacacccaaa 43524050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 203
Target Start/End: Complemental strand, 15056954 - 15056798
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcat 145  Q
    ||||||||||||| |||| |||||||||||| |||| |||||||        | |||||||| |||| | ||||||||||||||||||| ||| |||||     
T  15056954 caagtttttcactctcttaatcttattattagctttgtattagcttttcttttaaagttttagtctt-tatttagtgaaatggatcccactaacaatcaa 15056856  T
Q  146 ttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatc 203  Q
    |||||||||||||         ||||||| ||||| ||| ||||| ||||||||||||    
T  15056855 ttcaacacccaaaattcttctgattacccttttaactaccaaaatcccaacaattatc 15056798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 1633159 - 1633218
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | |||||||||||||||||||| |||||||| || ||||||||||    
T  1633159 tgaagttttagtctt-tgtttagtgaaatggatcccaacaataatcaatttaacacccaaa 1633218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 38204971 - 38205030
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||| ||||||||||| |||| || |||||    
T  38204971 tgaagttttagtctt-tatttagtgaaatggatcctaataataatcaattcaccatccaaa 38205030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 5813693 - 5813473
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  5813693 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatctttttcttattattatctttctattagcaaactaagtga 5813594  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||        |||||||||||||| ||||||||| |||||||||    
T  5813593 agttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaattattctaattacccatttaactacgaaaatcccaacaatt 5813494  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  5813493 atccaaatccaaatcaatttt 5813473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 22194599 - 22194423
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  22194599 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataacca 22194500  T
Q  145 tttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    ||||||||||||||        |||||||||| ||| ||||||||| |||||||||||||||||| || ||||||||    
T  22194499 tttcaacacccaaaatttttctaattacccatataactacgaaaatcccaacaattatccaaatccaaatcaatttt 22194423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 30630292 - 30630512
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||| |||||||||| ||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30630292 taaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 30630391  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||        |||||||||| ||| ||||||||| |||||||||    
T  30630392 agttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaaattttctaattacccatataactacgaaaatcccaacaatt 30630491  T
Q  201 atccaaatctaattcaatttt 221  Q
    |||||| || || ||||||||    
T  30630492 atccaagtccaaatcaatttt 30630512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 33379700 - 33379492
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| |||||||          |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33379700 taaatagagacttggttcatttgatttggacaca-aaaaaaaaaccaagtttttcactatcttcatcttattattatctttctagtagcaaactaagtga 33379602  T
Q  101 ag-ttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaat 199  Q
    || |||||||||||||||||||||||||||||||||||||||  |||||||||||||||        |||||||||| ||| |||||||||  |||||||    
T  33379601 agtttttaatcttatttttagtgaaatggatcccaataataacaatttcaacacccaaaatttttctaattacccatctaactacgaaaatctcaacaat 33379502  T
Q  200 tatccaaatc 209  Q
    ||||||||||    
T  33379501 tatccaaatc 33379492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 25217990 - 25218168
Alignment:
Q  45 ccaagtttttcactatcttc---atcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataa 141  Q
    ||||||||||||||||||||   |||||||||||||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||||    
T  25217990 ccaagtttttcactatcttcttcatcttattattatctttctattag-aaactaagtaaagttttaatattattttttgtgaaatggatcccaataataa 25218088  T
Q  142 tcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    |||||||||||||||||        |||||||||||||| ||||||||| ||||||||||| |||||| || ||||||||    
T  25218089 tcatttcaacacccaaaatttttctaattacccatttaactacgaaaatcccaacaattattcaaatccaaatcaatttt 25218168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 35028477 - 35028635
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35028477 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaaatttttcactatcttcttcttattattatctttctattagcaaactaagtga 35028576  T
Q  101 agttttaatcttatttttagtgaaatggatccc-aataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||    
T  35028577 agttttaatcttatttttagtgaaatggatcccaaataataaccatttcaacaaccaaa 35028635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 24793801 - 24793688
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24793801 ccaagtttttcactatgttaatcttattattatctttctattagcaagctaagtgaagttttaatcttatttttagtgaaatggatcccaataataacca 24793702  T
Q  145 tttcaacacccaaa 158  Q
    ||||||||||||||    
T  24793701 tttcaacacccaaa 24793688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 37888795 - 37888656
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37888795 taaatagagacttggttcatttgatttggacacagaaaaaaaa-ccaagtttttcactatcttcatctaattattatctttctattagcaaactaagtga 37888697  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataa 141  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  37888696 agttttaatcttatttttagtgaaatgtatcccaataataa 37888656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 221
Target Start/End: Original strand, 1939676 - 1939799
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||| || |        ||||| ||||||| |||| ||||| ||||||    
T  1939676 tgaagtgttaatcttctttttagtgaaatggatcccaataataatcatttcaacactcagaattcttctaattatccatttagttaccaaaatcccaaca 1939775  T
Q  198 attatccaaatctaattcaatttt 221  Q
    |||||| ||||| || ||||||||    
T  1939776 attatcaaaatcgaaatcaatttt 1939799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 35192804 - 35192901
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataat 142  Q
    ||||||||||||||||||| |||||||||||||||||||| || |        ||||||||||| ||| |||||||||||||||||||||||||||||    
T  35192804 ccaagtttttcactatcttaatcttattattatctttctagtaacctttcttttgaagttttaaacttctttttagtgaaatggatcccaataataat 35192901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 48985236 - 48985189
Alignment:
Q  69 tattattatctttctattagcaaactaagtgaagttttaatcttattt 116  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  48985236 tattattatctttctattagtaaactaagtgaagttttaatcttattt 48985189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 43570799 - 43570886
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattag 88  Q
    ||||||||||| |||||||||||||| ||||||||         ||||||||||||||||||| ||||||  ||||||||||||||||    
T  43570799 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttaatcttaagattatctttctattag 43570886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 153
Target Start/End: Original strand, 43201680 - 43201735
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacac 153  Q
    |||||||||| || | |||||||||||||||||||||||||||||||||| |||||    
T  43201680 tgaagttttagtcatttttttagtgaaatggatcccaataataatcatttgaacac 43201735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 32749281 - 32749177
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| || ||||||||||         ||||||||||||  ||  ||||||||||||    
T  32749281 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattacccatttagctatcaaaattccaaca 32749183  T
Q  198 attatc 203  Q
    ||||||    
T  32749182 attatc 32749177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 40690653 - 40690549
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| || ||||||||||         ||||||||||||  ||  ||||||||||||    
T  40690653 tgaagttttagtctt-tatttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattacccatttagctatcaaaattccaaca 40690555  T
Q  198 attatc 203  Q
    ||||||    
T  40690554 attatc 40690549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 20354587 - 20354528
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| |||||||| ||||    
T  20354587 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacactcaaa 20354528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 26815453 - 26815394
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| || ||||||||||    
T  26815453 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaa 26815394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 32126994 - 32127053
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| || ||||||||||    
T  32126994 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaa 32127053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 33508353 - 33508412
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||| ||||| |||||||||||||    
T  33508353 tgaagttttagtctt-tatttagtgaaatggatcccaataacaatcaattcaacacccaaa 33508412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 38970378 - 38970319
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | |||||||||||||||| |||||||||||| |||||||||||||    
T  38970378 tgaagttttagtctt-tatttagtgaaatggatctcaataataatcaattcaacacccaaa 38970319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 115004 - 114951
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaaca 152  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| |||||||    
T  115004 tgaagttttagtctt-tatttagtgaaatggatcccaataataatcaattcaaca 114951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 37952106 - 37952047
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||| ||| ||||| |||||||||||||    
T  37952106 tgaagttttagtctt-tatttagtgaaatggatcccactaacaatcaattcaacacccaaa 37952047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 39770056 - 39769997
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||| | ||||||||||| |||||||||||||    
T  39770056 tgaagttttagtctt-tgtttagtgaaatggattcaaataataatcaattcaacacccaaa 39769997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 38351926 - 38351884
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||| |||||||||||||||||||||||| |||||||| ||||    
T  38351926 tttaatgaaatggatcccaataataatcaattcaacacacaaa 38351884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 42881906 - 42881864
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||    
T  42881906 tttagtgaaatggatcccactaacaatcaattcaacacccaaa 42881864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 33078558 - 33078617
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||| | | ||||| |||||||||||||    
T  33078558 tgaagttttagtctt-tatttagtgaaatggatcccactgacaatcaattcaacacccaaa 33078617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 43201638 - 43201674
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatcttt 81  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  43201638 ccaagtttttcactatcttaatcttattattagcttt 43201674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 45549131 - 45549182
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaa 150  Q
    |||||||||| |||| | |||||| |||||||||||||||||||||| |||||    
T  45549131 tgaagttttagtctt-tgtttagtaaaatggatcccaataataatcaattcaa 45549182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 2e-67; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 6377136 - 6377356
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||| |||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6377136 taaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 6377235  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||        |||||||||| ||| ||||||||| |||||||||    
T  6377236 agttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatataactacgaaaatcccaacaatt 6377335  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  6377336 atccaaatccaaatcaatttt 6377356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 17958004 - 17958224
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||| |||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17958004 taaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 17958103  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||        |||||||||| ||| ||||||||| |||||||||    
T  17958104 agttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatataactacgaaaatcccaacaatt 17958203  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  17958204 atccaaatccaaatcaatttt 17958224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 635097 - 634877
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||| |||||||||| ||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  635097 taaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 634998  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||        ||||||||||  || ||||||||| |||||||||    
T  634997 agttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccataaaaatacgaaaatcccaacaatt 634898  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  634897 atccaaatccaaatcaatttt 634877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 34328815 - 34328608
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34328815 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaaatttttcactatcttcttcttattattatctttctattagcaaactaagtga 34328716  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||        |||||||||||||| ||||||||| |||||||||    
T  34328715 aattttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaattattctaattacccatttaactacgaaaatcccaacaatt 34328616  T
Q  201 atccaaat 208  Q
    ||||||||    
T  34328615 atccaaat 34328608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 29951776 - 29951952
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |    
T  29951776 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttattttttgtgaaatggatcccaataataacta 29951875  T
Q  145 tttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    ||||||||||||||        |||||||||| ||| ||||||||| |||||||||||| || || || ||||||||    
T  29951876 tttcaacacccaaaaattttctaattacccatataactacgaaaatcccaacaattatctaattccaaatcaatttt 29951952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 2503760 - 2503603
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2503760 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctttctattagcaaactaagtga 2503661  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  2503660 aattttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaa 2503603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 198242 - 198084
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnn-ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtg 99  Q
    ||||||||||| |||||||||||||| ||||||||          ||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  198242 taaatagagacttggttcatttgatttggacacagaaaaaaaaaaccaagttattcactatcttcttcttattattatctttctattagcaaattaagtg 198143  T
Q  100 aagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  198142 aagttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaa 198084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 32360120 - 32360008
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||  || |||||||||||||| ||||||||||||| ||    
T  32360120 ccaagtttttcactatcttaatcttattattatctttctattagcagactaagtgaagttttaa-attttttttagtgaaatgaatcccaataataacca 32360022  T
Q  145 tttcaacacccaaa 158  Q
    |||||| |||||||    
T  32360021 tttcaagacccaaa 32360008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 221
Target Start/End: Complemental strand, 7540533 - 7540410
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |        ||||| |||||||  ||| ||||| ||||||    
T  7540533 tgaagttttaatcttctttttagtgaaatggatcccaataataatcctttcaacacccataattcttctaattatccatttagctaccaaaatcccaaca 7540434  T
Q  198 attatccaaatctaattcaatttt 221  Q
    |||||| ||||| || ||||||||    
T  7540433 attatcaaaatccaaatcaatttt 7540410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 57 - 156
Target Start/End: Complemental strand, 24115410 - 24115311
Alignment:
Q  57 ctatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacaccca 156  Q
    ||||||| |||||||||||| ||||||||||||        |||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  24115410 ctatcttaatcttattattagctttctattagcttttcttttgaacttttagtcttttttttagtgaaatggatcccaataataatcatttcaacaccca 24115311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 18642575 - 18642516
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  18642575 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaa 18642516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 12502326 - 12502170
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||  |||||||||| ||||||||         |||||||||||||| |||| |||||||||||| ||||| ||||||        |||    
T  12502326 taaatagagacttgaatcatttgatttggacacagaaaaaaaaaccaagtttttcactctcttaatcttattattaactttccattagcttttcttttga 12502227  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||| |||| | ||||||||||||||||| ||||| ||||| |||||||||||||    
T  12502226 agttttagtctt-tatttagtgaaatggatccaaataacaatcaattcaacacccaaa 12502170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 152
Target Start/End: Complemental strand, 12513399 - 12513293
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||||||| |||| |||||||||||| ||||| ||||||        |||||||||| |||| | ||||||||||||||||||||||| |||||    
T  12513399 ccaagtttttcactctcttaatcttattattaactttccattagcttttattttgaagttttagtctt-tatttagtgaaatggatcccaataacaatca 12513301  T
Q  145 tttcaaca 152  Q
     |||||||    
T  12513300 attcaaca 12513293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 8222485 - 8222441
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagc 89  Q
    |||||||||||||| |||| |||||||||||| ||||||||||||    
T  8222485 ccaagtttttcactctcttaatcttattattaactttctattagc 8222441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 26653897 - 26653956
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | |||||| |||||||| ||||||||||||| |||||||||||||    
T  26653897 tgaagttttagtctt-tgtttagtaaaatggattccaataataatcaattcaacacccaaa 26653956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 26759866 - 26759925
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | |||||| |||||||| ||||||||||||| |||||||||||||    
T  26759866 tgaagttttagtctt-tgtttagtaaaatggattccaataataatcaattcaacacccaaa 26759925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 31471603 - 31471383
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  31471603 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctttctattagcaaactaattga 31471504  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||        |||||||||||||| ||||||||| |||||||||    
T  31471503 agttttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaattattctaattacccatttaactacgaaaatcccaacaatt 31471404  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  31471403 atccaaatccaaatcaatttt 31471383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 45242467 - 45242247
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| ||| |||||||||| ||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45242467 taaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 45242368  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||        |||||||||| ||| ||||||||| |||||||||    
T  45242367 agttttaatcttattttttgtgaaatggatcccaataataaccatttcaacacccaaaatttttctaattacccatataactacgaaaatcccaacaatt 45242268  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  45242267 atccaaatccaaatcaatttt 45242247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 37419881 - 37420088
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37419881 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctttctattagcaaactaagtga 37419980  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||        |||||||||||||| ||||||||| |||||||||    
T  37419981 aattttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaccaaaattattctaattacccatttaactacgaaaatcccaacaatt 37420080  T
Q  201 atccaaat 208  Q
    ||||||||    
T  37420081 atccaaat 37420088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 52930349 - 52930569
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| | ||||||         |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  52930349 taaatagagacttggttcatttgatttgaacacagaaaaaaaaaccaagtttttcattatcttcatcttattattatatttctattagcaaactaagtga 52930448  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||        ||||| |||||||| ||||||||| |||||||||    
T  52930449 agttttaatcttattttttgtgaaatgtatcccaataataaccatttcaacacccaaaatttttctaattatccatttaactacgaaaatcccaacaatt 52930548  T
Q  201 atccaaatctaattcaatttt 221  Q
    ||||||||| || ||||||||    
T  52930549 atccaaatccaaatcaatttt 52930569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 27629997 - 27630204
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||||||         |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27629997 taaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctttctattagcaaactaagtga 27630096  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaatt 200  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||        ||||||| |||||| ||||||||| |||||||||    
T  27630097 aattttaatcttatttttagtgaaatggatcccaataataaccatttcaacaaacaaaattattctaattacctatttaactacgaaaatcccaacaatt 27630196  T
Q  201 atccaaat 208  Q
    ||||||||    
T  27630197 atccaaat 27630204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 46 - 221
Target Start/End: Complemental strand, 17786615 - 17786440
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcat 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||| |||||||| |||    
T  17786615 caagtttttcactatcttcatcttattattatctttctattagcaaattaagtgaaattttaatcttattttttgtgaaatggatccaaataataaccat 17786516  T
Q  146 ttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    |||||||||||||        |||||||||||||| || |||||| |||||||||||||||||  || ||||||||    
T  17786515 ttcaacacccaaaatttttttaattacccatttaactatgaaaatcccaacaattatccaaatgcaaatcaatttt 17786440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 37646137 - 37646250
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  37646137 ccaagtttttcactatcttcttcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataacca 37646236  T
Q  145 tttcaacacccaaa 158  Q
    |||||||| |||||    
T  37646237 tttcaacaaccaaa 37646250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 8464982 - 8464824
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnn-ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtg 99  Q
    ||||||||||| |||||||||||||| ||||||||          ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8464982 taaatagagacttggttcatttgatttggacacagaaaaaaaaaaccaagtttttcactatcttaatcttattattatctttctattagcaaactaagtg 8464883  T
Q  100 aagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||    
T  8464882 aagttttaatcttttttttagtgaaatggatcccaataataaccatttcaagacccaaa 8464824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 44450922 - 44451071
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||| ||         |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44450922 taaatagagacttggttcatttgatttggacatagaaaaaaaaaccaagtttttcactatcttcttcttattattatctttctattagcaaactaagtga 44451021  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaa 150  Q
    |||||||| ||||||||||||||||||||||||||||| || ||||||||    
T  44451022 agttttaagcttatttttagtgaaatggatcccaataacaaccatttcaa 44451071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 44651490 - 44651341
Alignment:
Q  1 taaatagagacctggttcatttgattcggacacagnnnnnnnnnccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtga 100  Q
    ||||||||||| |||||||||||||| ||||| ||         |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  44651490 taaatagagacttggttcatttgatttggacatagaaaaaaaaaccaaatttttcactatcttcttcttattattatctttctattagcaaactaagtga 44651391  T
Q  101 agttttaatcttatttttagtgaaatggatcccaataataatcatttcaa 150  Q
    |||||||| ||||||||||||||||||||||||||||| || ||||||||    
T  44651390 agttttaagcttatttttagtgaaatggatcccaataacaaccatttcaa 44651341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 152
Target Start/End: Complemental strand, 36303466 - 36303360
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcat 145  Q
    |||||||||||||||||| |||||||||||||| |||||||||         ||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  36303466 caagtttttcactatcttaatcttattattatccttctattagtttttcttttgaagttttaaacttctttttagtgaaatggatcccaataataatcat 36303367  T
Q  146 ttcaaca 152  Q
    |||||||    
T  36303366 ttcaaca 36303360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 48927201 - 48927141
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  48927201 tgaagttttaatattctttttagtgaaatggatcccaataataatcatttcaacacccaaa 48927141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 46 - 152
Target Start/End: Complemental strand, 48729806 - 48729700
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcat 145  Q
    |||||||||||||||||| ||||||| |||||| |||||||||         ||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  48729806 caagtttttcactatcttaatcttatcattatccttctattagtttttcttttgaagttttaaacttctttttagtgaaatggatcccaataataatcat 48729707  T
Q  146 ttcaaca 152  Q
    |||||||    
T  48729706 ttcaaca 48729700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 20584519 - 20584579
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttt 105  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  20584519 ccaaatttttcactatcttaatcttattattatttttctattagcaaactaagtgaagttt 20584579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 643565 - 643612
Alignment:
Q  69 tattattatctttctattagcaaactaagtgaagttttaatcttattt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  643565 tattattatctttctattagcaaactaagtgaagttttaatcttattt 643612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 29524230 - 29524126
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    ||||||||||||||| | |||||||||||| |||||||||||||||| |||||||||||||         ||||||||||||  ||| ||||| ||||||    
T  29524230 tgaagttttaatctt-tgtttagtgaaatgtatcccaataataatcaattcaacacccaaaattcttctgattacccatttagctaccaaaatcccaaca 29524132  T
Q  198 attatc 203  Q
    ||||||    
T  29524131 attatc 29524126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 51523596 - 51523492
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||         ||||||||||||  ||| ||||| ||||||    
T  51523596 tgaagttttagtctt-tatttagtgaaatggatcccaataataatcaattcaacacccaaaatttttatgattacccatttagctaccaaaatcccaaca 51523498  T
Q  198 attatc 203  Q
    ||||||    
T  51523497 attatc 51523492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 45455646 - 45455705
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  45455646 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaa 45455705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 18317587 - 18317629
Alignment:
Q  114 tttttagtgaaatggatcccaataataatcatttcaacaccca 156  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  18317587 tttttagtgaaatggatcccaataataatcatttaaacaccca 18317629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 142
Target Start/End: Complemental strand, 38212676 - 38212634
Alignment:
Q  100 aagttttaatcttatttttagtgaaatggatcccaataataat 142  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  38212676 aagttttaatcttattttaagtgaaatggatcccaataataat 38212634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 45363808 - 45363704
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | ||||||||||||||||||||||||||| | |||||||||||||         ||||||||||||  ||| ||||| ||||||    
T  45363808 tgaagttttagtctt-tgtttagtgaaatggatcccaataataataaattcaacacccaaaattcttcagattacccatttagctaccaaaatcccaaca 45363710  T
Q  198 attatc 203  Q
    ||||||    
T  45363709 attatc 45363704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 158
Target Start/End: Complemental strand, 31159804 - 31159693
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcat 145  Q
    ||||||||||||| |||| |||||||||||| |||| ||||||||       |||||||||| | || | ||||||||||||||||||| ||| |||||     
T  31159804 caagtttttcactctcttaatcttattattagctttgtattagcatttcttttgaagttttagtgtt-tatttagtgaaatggatcccactaacaatcaa 31159706  T
Q  146 ttcaacacccaaa 158  Q
    |||||||||||||    
T  31159705 ttcaacacccaaa 31159693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 36231244 - 36231141
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | ||||||||||||||||||||||| || || |||||||||||||        |||||||||||||  ||| ||||| ||||||    
T  36231244 tgaagttttagtctt-tatttagtgaaatggatcccaataacaa-cagttcaacacccaaaattcttcaaattacccatttagctaccaaaatcccaaca 36231147  T
Q  198 attatc 203  Q
    ||||||    
T  36231146 attatc 36231141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 51156425 - 51156529
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | |||||||||||||||| |||||||||||| || ||||||||||         ||||||||||||  ||  ||||||||||||    
T  51156425 tgaagttttagtctt-tgtttagtgaaatggatctcaataataatcaatttaacacccaaaattcttctgattacccatttagctatcaaaattccaaca 51156523  T
Q  198 attatc 203  Q
    ||||||    
T  51156524 attatc 51156529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 41542679 - 41542636
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagc 89  Q
    |||||||||||||||||| || | ||||||||||||||||||||    
T  41542679 caagtttttcactatcttaatatcattattatctttctattagc 41542636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 203
Target Start/End: Original strand, 17676042 - 17676198
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||| ||||||||| |||| |||||||||||| ||||| ||||||        |||||||||| |||| | ||||||||||||||||| ||||| |||||    
T  17676042 ccaaatttttcactctcttaatcttattattagctttccattagcttttcttttgaagttttagtctt-tatttagtgaaatggatcc-aataacaatca 17676139  T
Q  145 tttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatc 203  Q
     |||||||||||||         ||||||||||||  ||| ||||| ||||||||||||    
T  17676140 attcaacacccaaaattcttctgattacccatttagctaccaaaatcccaacaattatc 17676198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 48384947 - 48384989
Alignment:
Q  116 tttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||    
T  48384947 tttagtgaaatggatcccactaacaatcaattcaacacccaaa 48384989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 3754760 - 3754797
Alignment:
Q  51 ttttcactatcttcatcttattattatctttctattag 88  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  3754760 ttttcactatcttaatcttgttattatctttctattag 3754797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 33167545 - 33167483
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataa---taatcatttcaacacccaaa 158  Q
    |||||||||| |||| | |||||||||||||||||||||||   |||||| |||||||||||||    
T  33167545 tgaagttttagtctt-tgtttagtgaaatggatcccaataataataatcaattcaacacccaaa 33167483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 8471542 - 8471484
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||| ||||| ||||| |||||||||||||    
T  8471542 tgaagttttagtctt-tatttagtgaaatggatcc-aataacaatcaattcaacacccaaa 8471484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 47297332 - 47297391
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | || ||||||||||||| |||||| ||||| |||||||||||||    
T  47297332 tgaagttttagtctt-tattcagtgaaatggatctcaataacaatcaattcaacacccaaa 47297391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 46 - 221
Target Start/End: Original strand, 6421 - 6594
Alignment:
Q  46 caagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatcat 145  Q
    |||||||||||||||||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6421 caagtttttcactatcttaatcttattattatcc--ctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataaacat 6518  T
Q  146 ttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaacaattatccaaatctaattcaatttt 221  Q
    ||||||||| |||        |||||||||||||| ||||||||||| |||||||||| ||||  || ||||||||    
T  6519 ttcaacaccaaaaattattctaattacccatttaactacgaaaattcaaacaattatcaaaattcaaatcaatttt 6594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 208
Target Start/End: Original strand, 166140 - 166250
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||||||||||        ||||| |||||||| ||| ||||| ||||||    
T  166140 tgaagttttaatcttctttttagtgaaatgaatctcaataataatcctttcaacacccaaaattctgctaattatccatttaactaccaaaatcccaaca 166239  T
Q  198 attatccaaat 208  Q
    |||||| ||||    
T  166240 attatcaaaat 166250  T

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Target: scaffold0012 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 124411 - 124309
Alignment:
Q  45 ccaagtttttcactatcttcatcttattattatctttctattagcaaactaagtgaagttttaatcttatttttagtgaaatggatcccaataataatca 144  Q
    |||||||||| |||||||| ||||||||||||||||||||||| |        ||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  124411 ccaagttttttactatcttaatcttattattatctttctattaacttttcttttgaagttttaaacttctttttagtgaaatggatcccaataattatca 124312  T
Q  145 ttt 147  Q
    |||    
T  124311 ttt 124309  T

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Target: scaffold1905 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold1905
Description:

Target: scaffold1905; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 1175 - 1234
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  1175 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaa 1234  T

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Target: scaffold1905; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 248 - 144
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | ||||||||||||||||||| ||| |||||| ||||||||||||         ||||||| ||||  ||| ||||||||||||    
T  248 tgaagttttagtctt-tatttagtgaaatggatcccactaacaatcatatcaacacccaaaattcttctgattacccttttagctaccaaaattccaaca 150  T
Q  198 attatc 203  Q
    ||||||    
T  149 attatc 144  T

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Target: scaffold1454 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 599 - 540
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  599 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaattcaacacccaaa 540  T

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Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 109954 - 110058
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaannnnnnnnaattacccatttaattacgaaaattccaaca 197  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| || ||||||||||         ||||||||||||  ||  ||||||||||||    
T  109954 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaaattcttctgattacccatttagctatcaaaattccaaca 110052  T
Q  198 attatc 203  Q
    ||||||    
T  110053 attatc 110058  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 106164 - 106105
Alignment:
Q  98 tgaagttttaatcttatttttagtgaaatggatcccaataataatcatttcaacacccaaa 158  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||| || ||||||||||    
T  106164 tgaagttttagtctt-tgtttagtgaaatggatcccaataataatcaatttaacacccaaa 106105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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