View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17615_low_1 (Length: 1017)
Name: NF17615_low_1
Description: NF17615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17615_low_1 |
 | |
|
| [»] chr3 (53 HSPs) |
| |
|
| [»] scaffold0425 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 381; Significance: 0; HSPs: 53)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 242 - 1017
Target Start/End: Original strand, 6242356 - 6243161
Alignment:
| Q |
242 |
attttttatcacttccttctaacaataaaaagtaaaactgaaaatcacagttaaaggtcaggtcatatccacaccttataattggtaaacacaagtaatt |
341 |
Q |
| |
|
||||| || |||||| |||||||||||||||||||||| |||||||| ||||||||| || ||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
6242356 |
attttctaccacttctttctaacaataaaaagtaaaacagaaaatcaaagttaaaggacatgtcatatcctcaccttataattggtagacacaagtaatt |
6242455 |
T |
|
| Q |
342 |
ctcacggcacttttttcaagtctcatgttgtctgggaacccaaaat-----cacaggcacaatattaagagaccccgaaaaaggga-ataa---ca-aag |
431 |
Q |
| |
|
|||||| | |||||||||||||||||||| |||||||||| |||| || || ||||||||||||||||||||||||||||| | || || ||| |
|
|
| T |
6242456 |
ctcacgcctcttttttcaagtctcatgttttctgggaacctgaaattaatacagagtcacaatattaagagaccccgaaaaagggatacaaagtcacaag |
6242555 |
T |
|
| Q |
432 |
aagaacaaagagaagattatatggtgaattaaattaaaaagaattacatcatgcacaacaagccgcagcgtctacacatccaaacgtggagcctacaatt |
531 |
Q |
| |
|
|| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||| | ||||||||||||| |
|
|
| T |
6242556 |
aataacaaagagaagattatatggtgacttaaattaaaaacaattacatcatgcacaacaagtcgcagcgtcgacacatccaaatgcggagcctacaatt |
6242655 |
T |
|
| Q |
532 |
gaaccatgcatgagctttatggaagtggaacaaacagtcacatccttctggttgtgcgtgagagcggtggtcatgccattcatctggtcatgaatgagaa |
631 |
Q |
| |
|
|||||||||||||||| ||||||| || |||||| |||| ||| |||||||| |||||||| ||||||||||||||| | |||||| ||||||||| |
|
|
| T |
6242656 |
agaccatgcatgagctttgtggaagtaaaataaacagcaacatacttttggttgtgtgtgagagcagtggtcatgccattcgtttggtcacgaatgagaa |
6242755 |
T |
|
| Q |
632 |
t---------------------gtttcaggtc----gtaagcagtcagaaacacgattgcaatatatatcgcaaaggaca-tgcactgttcaaggcaaaa |
705 |
Q |
| |
|
| |||||||||| |||||||||||||||||| |||| || ||||||| |||| ||| |||||||||||| |||| |
|
|
| T |
6242756 |
tggatcgcaacaagagagcatggtttcaggtcacatgtaagcagtcagaaacaccattgaaacatatatcacaaac-acagtgcactgttcaacataaaa |
6242854 |
T |
|
| Q |
706 |
cacagtaagttgtgcattatttttactatttaaaagaaaatttacaaatgtttgacaactataaacagattggtgaatgtggtgcacctggctataataa |
805 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
6242855 |
cacagtatgttgtgcattatttttactgtttaaaagaaaatatactaatgtttgacaactataaacagattggtgaatgtgctgcacctggctacaataa |
6242954 |
T |
|
| Q |
806 |
catctcatctcagctgccaatcaggaaattgtcacatcaggaatgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagta |
905 |
Q |
| |
|
||||||| || |||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
6242955 |
catctca-----gccgccaatcaggaaattgtcacgttagggatgtgacaaattgtatgccaacgctctccttgctccttttggtacaactgcttaagta |
6243049 |
T |
|
| Q |
906 |
atggacagtcatgaattgacaaagtagaaagggagctgggtagaccctcctctggcaagctctcaagacaagggcaatcatcaatatataaagattcaag |
1005 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
6243050 |
atggacagtcatgaattgacaaagtagaaagagagataggtagaccctcctctggcaagctctcaagacaagggcaatcttcaatatatagagattcaag |
6243149 |
T |
|
| Q |
1006 |
ggaagtgaggtg |
1017 |
Q |
| |
|
||||||||||| |
|
|
| T |
6243150 |
tgaagtgaggtg |
6243161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 429 - 1017
Target Start/End: Original strand, 6235271 - 6235891
Alignment:
| Q |
429 |
aagaagaacaaagagaagattatatggtgaattaaattaaaaagaattacatcatgcacaacaagccgcagcgtctacacatccaaacgtggagcctaca |
528 |
Q |
| |
|
||||| || ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||| |||| |||||||||||| |
|
|
| T |
6235271 |
aagaataagaaagagaagataatatggtgaattaaattaagaagaattacatcatgcacaactagccgcagcgtcgacacattcaaatgtggagcctaca |
6235370 |
T |
|
| Q |
529 |
attgaaccatgcatgagctttatggaagtggaacaaacagtcacatccttctggttgtgcgtgagagcggtggtca-------tgccattcatctggtca |
621 |
Q |
| |
|
|||| |||||||||||| ||| ||||||||||| |||||| |||| |||||||||||| |||||||| ||||||| |||||||||| |||||| |
|
|
| T |
6235371 |
attggaccatgcatgagttttgtggaagtggaataaacagctacatacttctggttgtgtgtgagagcagtggtcaatggtcatgccattcatttggtca |
6235470 |
T |
|
| Q |
622 |
tgaatgagaat---------------------gtttcaggtc----gtaagcagtcagaaacacgattgcaatatatatcgcaaaggacatgcactgttc |
696 |
Q |
| |
|
||||||||||| |||||||||| |||||| ||||||||| | |||| || ||||||| ||| | |||||||||| |
|
|
| T |
6235471 |
tgaatgagaatggatggcaacaaaagagaacggtttcaggtcacatgtaagcggtcagaaacgccattgaaacatatatcacaacaaccgtgcactgttc |
6235570 |
T |
|
| Q |
697 |
aaggcaaaacacagtaagttgtgcattatttttactatttaaaagaaaatttacaaatgtttgacaactataaacagattggtgaatgtggtgcacctgg |
796 |
Q |
| |
|
|| ||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
6235571 |
aacataaaacacagtaggctgtgcattatttttactatttaaaagaaaatttactaatgtttgacaagtataaacagattgggaaatgtggtgcacctgg |
6235670 |
T |
|
| Q |
797 |
ctataataacatctcatctcagctgccaatcaggaaattgtcacatcaggaatgtgacaaattgtatgccaacgctctccttcctccttttggtacaact |
896 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
6235671 |
ctacaataacatctcatctcagctgccaatcaggaaattgtcacataaggaatgtgagaaattgtatgccaacgctctccttgctccttttggtacaact |
6235770 |
T |
|
| Q |
897 |
tcttaagtaatggacagtcatgaattgacaaagtagaaagggagctgggtagaccctcctctggcaagctctcaagacaagggcaatcatcaatatataa |
996 |
Q |
| |
|
||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||| || || |||||||||| |
|
|
| T |
6235771 |
gcttaattaatggacagtcatgaatggacaaagtagaaagggagatgggtagaccctcctctggcaagctctcaaaacaaggacagtcttcaatatatag |
6235870 |
T |
|
| Q |
997 |
agattcaagggaagtgaggtg |
1017 |
Q |
| |
|
||||||||| ||||||||||| |
|
|
| T |
6235871 |
agattcaagtgaagtgaggtg |
6235891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 106 - 633
Target Start/End: Original strand, 6165794 - 6166333
Alignment:
| Q |
106 |
ccaaaacgtcaagtatattttatttttaatatgccggtgctgaataataacagccaaaagaaatttgattaaatcacggttcaactatgattggaaaaca |
205 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || ||||||||||| ||||||| |
|
|
| T |
6165794 |
ccaaaacgacaagtatattttatttttaatatgccagtgctgaataataacagccacaagaaatttgattaaatcattgtccaactatgattagaaaaca |
6165893 |
T |
|
| Q |
206 |
ccaaatttcactgataacaaagtggcataactttcaattttttat-------------------cacttccttctaacaataaaaagtaaaactgaaaat |
286 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
6165894 |
ccaaatttcactgataacaaagtggcatgactttcaattttttattttctataatattttttatcacttctttctaacaataaaaagtaaaactgaaaat |
6165993 |
T |
|
| Q |
287 |
cacagttaaaggtcaggtcatatccacaccttataattggtaaacacaagtaattctcacggcacttttttcaagtctcatgttgtctgggaacccaaaa |
386 |
Q |
| |
|
||||||||||| | ||||||||||| ||||||||||||||| | |||||||||||||||| | |||||||| ||||||| ||| |
|
|
| T |
6165994 |
cacagttaaagttgaggtcatatcctcaccttataattggttgaaacaagtaattctcacgcctcttttttcc---------------gggaacctgaaa |
6166078 |
T |
|
| Q |
387 |
tcacaggcacaa---tattaagagaccccgaaaaaggga-ataa---ca-aagaagaacaaagagaagattatatggtgaattaaattaaaaagaattac |
478 |
Q |
| |
|
||| || ||||| |||||||||||||| ||||||||| | || || ||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
6166079 |
tcagagtcacaagaatattaagagaccccaaaaaagggatacaaagtcacaagaataacaaagagaagattatatggtgaatgaaattaaaaagaattac |
6166178 |
T |
|
| Q |
479 |
atcatgcacaacaagccgcagcgtctacacatccaaacgtggagcctacaattgaaccatgcatgagctttatggaagtggaacaaacagtcacatcctt |
578 |
Q |
| |
|
||||||||||||||||| |||| || ||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||| |||||| |||| || |
|
|
| T |
6166179 |
atcatgcacaacaagccacagcatcgacacatccaaatgtggagcctaaaattggaccatgcatgagctttctggaagtggaataaacagctacatattt |
6166278 |
T |
|
| Q |
579 |
ctggttgtgcgtgagagcggtggtcatgccattcatctggtcatgaatgagaatg |
633 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
6166279 |
ctggttgtgtgtgagagcggtggtcatgccattcatttggtcacgaatgagaatg |
6166333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 728 - 1017
Target Start/End: Original strand, 6166451 - 6166741
Alignment:
| Q |
728 |
ttactatttaaaagaaaatttacaaatgtttgacaactat-aaacagattggtgaatgtggtgcacctggctataataacatctcatctcagctgccaat |
826 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
6166451 |
ttactatttaaaagaaaatttactaatgtttgacaacaattaaacagattggtgaatgtggtgcacctggctacaataacatctcatatcagctgccaat |
6166550 |
T |
|
| Q |
827 |
caggaaattgtcacatcaggaatgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattgaca |
926 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
6166551 |
caggaaattgtcacatcaggaatgtgactaattgtatgcctacgttctccttgctccttttggtacaacttcttaagtaatggacaatcacgaattgaca |
6166650 |
T |
|
| Q |
927 |
aagtagaaagggagctgggtagaccctcctctggcaagctctcaagacaagggcaatcatcaatatataaagattcaagggaagtgaggtg |
1017 |
Q |
| |
|
||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
6166651 |
aagtagacagggatctgggtagaccctcatctggcaagctctcaagacaagggcaatcatcaatatatagagattcaagtgaagtgaggtg |
6166741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 222; E-Value: 1e-121
Query Start/End: Original strand, 484 - 1005
Target Start/End: Original strand, 6879802 - 6880348
Alignment:
| Q |
484 |
gcacaacaagccgcagcgtctacacatccaaacgtggagcctacaattgaaccatgcatgagctttatggaagtggaacaaacagtcacatccttctggt |
583 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||| | ||||||||||||| |||||||||||||||| ||||||||||| |||||| |||| ||||| || |
|
|
| T |
6879802 |
gcacaacaagtcgcagtgtctacacatccaaatgacgagcctacaattggaccatgcatgagctttgtggaagtggaataaacagctacatacttctagt |
6879901 |
T |
|
| Q |
584 |
tgtgcgtgagagcggtggtcatgccattcatctggtcatgaatgagaat---------------------gtttcaggtc----gtaagcagtcagaaac |
658 |
Q |
| |
|
|||| || ||||| ||||||||||||||||| |||||| |||||||||| |||||||||| |||||| |||||||| |
|
|
| T |
6879902 |
tgtgtgtaagagcagtggtcatgccattcatttggtcacgaatgagaatggatggcaacaaaagagcatggtttcaggtcacatgtaagcggtcagaaag |
6880001 |
T |
|
| Q |
659 |
acgattgcaatatatatcgcaaaggacatgcactgttcaaggcaaaacacagtaagttgtgcattatttttactatttaaaagaaaatttacaaatgttt |
758 |
Q |
| |
|
| ||||||| ||||||| |||| | |||||||||||| |||| | |||| || || || ||||||||||||||| ||||||| ||| ||||||| |
|
|
| T |
6880002 |
agcattgcaacatatatcacaaacaccgtgcactgttcaacataaaagatagtatcttatgaataatttttactatttaagagaaaatatactaatgttt |
6880101 |
T |
|
| Q |
759 |
gacaactataaacagattggtgaatgtggtgcacctggctataataacatctcatctcagctgccaatcaggaaattgtcacatcaggaatgtgacaaat |
858 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
6880102 |
gacaagtataaacagattgggaaatgtggtgcacctggctacaataacatctcatctcagccgcctatcaggaaattgtcacatcaggaatgtgactaat |
6880201 |
T |
|
| Q |
859 |
tgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaagggagctgggtagaccctcctct |
958 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || ||||| |||||| || |||||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
6880202 |
tgtatgccaacgctctccttcctccttttggtacttctgcttaattaatgggcaatcatgaatggacaaagtagaaagggaactgggtagaccctcctct |
6880301 |
T |
|
| Q |
959 |
ggcaagctctcaagacaagggcaatcatcaatatataaagattcaag |
1005 |
Q |
| |
|
|||||||| |||||||||||||| || |||||| ||| ||||||||| |
|
|
| T |
6880302 |
ggcaagctgtcaagacaagggcagtcttcaatacatagagattcaag |
6880348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 666 - 1017
Target Start/End: Original strand, 6256695 - 6257046
Alignment:
| Q |
666 |
caatatatatcgcaaaggacatgcactgttcaaggcaaaacacagtaagttgtgcattatttttactatttaaaagaaaatttacaaatgtttgacaact |
765 |
Q |
| |
|
||||||||||| |||| | |||||| ||||||| ||||||||||| ||| ||||| |||||||||||| |||| |||||||| |||||||||||||| |
|
|
| T |
6256695 |
caatatatatcacaaaaggcatgcattgttcaaaataaaacacagtacgttatgcataatttttactattcgaaaggaaatttactaatgtttgacaact |
6256794 |
T |
|
| Q |
766 |
ataaacagattggtgaatgtggtgcacctggctataataacatctcatctcagctgccaatcaggaaattgtcacatcaggaatgtgacaaattgtatgc |
865 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||| ||||| |||| |||||||||||||||||||||||| |||||| ||| |||||| ||||||||||| |
|
|
| T |
6256795 |
ataaacagattggtgaatgttgtgcacctgtctacaataaaatctgatctcagctgccaatcaggaaattatcacataagggatgtgagaaattgtatgc |
6256894 |
T |
|
| Q |
866 |
caacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaagggagctgggtagaccctcctctggcaagc |
965 |
Q |
| |
|
||| |||| |||| |||||||||||||| || ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6256895 |
caatgctcgccttgctccttttggtacagctgcttaattaatggacaatcatgaatcgacaaagtagaaagggagctgggtagaccctcctctggcaagc |
6256994 |
T |
|
| Q |
966 |
tctcaagacaagggcaatcatcaatatataaagattcaagggaagtgaggtg |
1017 |
Q |
| |
|
| ||||||||||| ||||| |||||||||| ||||||||| ||||||||||| |
|
|
| T |
6256995 |
tatcaagacaaggacaatcttcaatatatagagattcaagtgaagtgaggtg |
6257046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 724 - 1017
Target Start/End: Original strand, 6897639 - 6897932
Alignment:
| Q |
724 |
atttttactatttaaaagaaaatttacaaatgtttgacaactataaacagattggtgaatgtggtgcacctggctataataacatctcatctcagctgcc |
823 |
Q |
| |
|
||||||||||| ||| ||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
6897639 |
atttttactatgtaagagaaaatatactaatgtttgacaagtataaacagattggtgaatgtggtgcacctggctataataacatctcatctcagccgcc |
6897738 |
T |
|
| Q |
824 |
aatcaggaaattgtcacatcaggaatgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattg |
923 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| || ||||| |||||| || |||||||| | |
|
|
| T |
6897739 |
aatcaggaaattgtcacatcaggaatgtgactaattgtatgccaacactctccttcctccttttggtacttctgcttaattaatgggcaatcatgaatgg |
6897838 |
T |
|
| Q |
924 |
acaaagtagaaagggagctgggtagaccctcctctggcaagctctcaagacaagggcaatcatcaatatataaagattcaagggaagtgaggtg |
1017 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||| || |||||||||| ||||||||| ||||||||||| |
|
|
| T |
6897839 |
acaaagtagaaagggagctgggtagacactcctccggcaagctctcaaggaaagggcagtcttcaatatatagagattcaagtgaagtgaggtg |
6897932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 718 - 1017
Target Start/End: Original strand, 6139831 - 6140130
Alignment:
| Q |
718 |
tgcattatttttactatttaaaagaaaatttacaaatgtttgacaactataaacagattggtgaatgtggtgcacctggctataataacatctcatctca |
817 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||| |
|
|
| T |
6139831 |
tgcattaattttactatttaaaagaaaatttactaatgtttgacaactataaacagattggtgaatgttgtgcacctggaaaaaataacatctcatctca |
6139930 |
T |
|
| Q |
818 |
gctgccaatcaggaaattgtcacatcaggaatgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcat |
917 |
Q |
| |
|
|| | ||||||||||||||| ||| ||| || ||| ||||||||||||||||||| |||| ||||||||||||||||| ||| | ||||||||| |||| |
|
|
| T |
6139931 |
gccgtcaatcaggaaattgtgacagaagggatatgagaaattgtatgccaacgctcgccttgctccttttggtacaactgcttgattaatggacaatcat |
6140030 |
T |
|
| Q |
918 |
gaattgacaaagtagaaagggagctgggtagaccctcctctggcaagctctcaagacaagggcaatcatcaatatataaagattcaagggaagtgaggtg |
1017 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||| |
|
|
| T |
6140031 |
gaatggacaaagtagaaagggaactgggtagaccctcctctggcaagctctcaagacaagggcaatcttcaatatatagagattcaagtgaagtgaggtg |
6140130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 702 - 1017
Target Start/End: Complemental strand, 13275904 - 13275589
Alignment:
| Q |
702 |
aaaacacagtaagttgtgcattatttttactatttaaaagaaaatttacaaatgtttgacaactataaacagattggtgaatgtggtgcacctggctata |
801 |
Q |
| |
|
||||||||||| ||||||||||| ||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||| | |||||||||| | | |
|
|
| T |
13275904 |
aaaacacagtacgttgtgcattaatttcactatttaaaagaaaatttactaatgttcgacaactataaacagattggtgaatatcgtgcacctggaaaaa |
13275805 |
T |
|
| Q |
802 |
ataacatctcatctcagctgccaatcaggaaattgtcacatcaggaatgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttctta |
901 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||| ||| ||| || ||| |||||||||||||||||| |||| ||||||||||||||||| |||| |
|
|
| T |
13275804 |
ataacatctcatctcagccgtcaatcaggaaattgtgacagaagggatatgagaaattgtatgccaacgcttgccttgctccttttggtacaactgctta |
13275705 |
T |
|
| Q |
902 |
agtaatggacagtcatgaattgacaaagtagaaagggagctgggtagaccctcctctggcaagctctcaagacaagggcaatcatcaatatataaagatt |
1001 |
Q |
| |
|
| ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
13275704 |
attaatggacaatcatgaatggacaaagtagaaagggaactgggtagaccctcctctggcaagctctcaagacaagggcaatcttcaatatatagagatt |
13275605 |
T |
|
| Q |
1002 |
caagggaagtgaggtg |
1017 |
Q |
| |
|
|||| ||||||||||| |
|
|
| T |
13275604 |
caagtgaagtgaggtg |
13275589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 764 - 1017
Target Start/End: Original strand, 6263273 - 6263526
Alignment:
| Q |
764 |
ctataaacagattggtgaatgtggtgcacctggctataataacatctcatctcagctgccaatcaggaaattgtcacatcaggaatgtgacaaattgtat |
863 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
6263273 |
ctataaacagattggtgaatgttgtgcacctggctacaataacatctcatctcagctgccaatcaggaaattgtcacataaggaatgtgagaaattgtat |
6263372 |
T |
|
| Q |
864 |
gccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaagggagctgggtagaccctcctctggcaa |
963 |
Q |
| |
|
|||||||||| |||| |||| |||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6263373 |
gccaacgctcgccttgctccgtttggtacaactgcttaattaatggacaatcatgaattgacaaagtagaaagggagctgggtagaccctcctctggcaa |
6263472 |
T |
|
| Q |
964 |
gctctcaagacaagggcaatcatcaatatataaagattcaagggaagtgaggtg |
1017 |
Q |
| |
|
||||||||||||||||||||| |||||||||| ||||| || ||||||||||| |
|
|
| T |
6263473 |
gctctcaagacaagggcaatcttcaatatatagagatttgagtgaagtgaggtg |
6263526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 724 - 1014
Target Start/End: Complemental strand, 6851536 - 6851246
Alignment:
| Q |
724 |
atttttactatttaaaagaaaatttacaaatgtttgacaactataaacagattggtgaatgtggtgcacctggctataataacatctcatctcagctgcc |
823 |
Q |
| |
|
||||||||||| ||| ||||||| ||| |||||||||||| |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
6851536 |
atttttactatctaagagaaaatatactaatgtttgacaagtataaacagactgggaaatgtggtgcacctggctacaataacatctcatctcagccgcc |
6851437 |
T |
|
| Q |
824 |
aatcaggaaattgtcacatcaggaatgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattg |
923 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||| |||||||| || ||||| |||||||||||||||||| | |
|
|
| T |
6851436 |
aatcaggaaattgtcacatcaggaatgtgactaattgtatgccaatgctctgcttcctccctttggtacttctgcttaattaatggacagtcatgaatgg |
6851337 |
T |
|
| Q |
924 |
acaaagtagaaagggagctgggtagaccctcctctggcaagctctcaagacaagggcaatcatcaatatataaagattcaagggaagtgag |
1014 |
Q |
| |
|
|| ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||| |||||||| |
|
|
| T |
6851336 |
actaagtagaaagggatctgggaagaccctcctccggcaagctctcaagacaagggcaatcttcaatatatagagattcaagagaagtgag |
6851246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 685 - 1017
Target Start/End: Complemental strand, 6593868 - 6593538
Alignment:
| Q |
685 |
catgcactgttcaaggcaaaacacagtaagttgtgcattatttttactatttaaaagaaaatttacaaatgtttgacaactataaacagattggtgaatg |
784 |
Q |
| |
|
||||||||||||||| |||||| |||| |||||||||||| | | |||| | ||||| || |||||| |||||||| |||||||| ||||||||||| |
|
|
| T |
6593868 |
catgcactgttcaagataaaacatagtatcttgtgcattattgt-atgatttgacagaaa-ttcacaaatctttgacaagtataaacaaattggtgaatg |
6593771 |
T |
|
| Q |
785 |
tggtgcacctggctataataacatctcatctcagctgccaatcaggaaattgtcacatcaggaatgtgacaaattgtatgccaacgctctccttcctcct |
884 |
Q |
| |
|
|||||||||||||| ||||||| |||||| || | || |||||||||||||| |||||||||||||||| |||| |||||||| |||| ||||||||| |
|
|
| T |
6593770 |
cggtgcacctggctacaataacagctcatcccaaccgctaatcaggaaattgttacatcaggaatgtgactaattttatgccaatgctcgccttcctcca |
6593671 |
T |
|
| Q |
885 |
tttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaagggagctgggtagaccctcctctggcaagctctcaagacaagggcaatc |
984 |
Q |
| |
|
||||||||| || ||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
6593670 |
tttggtacagctgcttaattaatgggcagtcatgaatggacaaagtagaaagggagctgggtagaccctcctctggcaagctgtcaagacaagggcagtc |
6593571 |
T |
|
| Q |
985 |
atcaatatataaagattcaagggaagtgaggtg |
1017 |
Q |
| |
|
|||||| ||| ||||||||| ||||||||||| |
|
|
| T |
6593570 |
ttcaatacatagagattcaagtgaagtgaggtg |
6593538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 242 - 633
Target Start/End: Original strand, 6256263 - 6256657
Alignment:
| Q |
242 |
attttttatcacttccttctaacaataaaaagtaaaactgaaaatcacagttaaaggtcaggtcatatccacaccttataattggtaaacacaagtaatt |
341 |
Q |
| |
|
||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| || ||||| ||| |
|
|
| T |
6256263 |
attttgtaccacttctttctaacaataaaaagtaaaactgaaaatcacagttaaaggtca-----tatcctcaccttataattggtagacgcaagttatt |
6256357 |
T |
|
| Q |
342 |
ctcacggcacttttttcaagtctcatgttgtctgggaacccaaaatcaca--ggcacaa---tattaa-gagaccccgaaaaaggga----ataaca-aa |
430 |
Q |
| |
|
|||| | | |||||||||||||||||||| |||||||||| |||||||| | ||||| |||||| |||| | ||||||||||| | | || || |
|
|
| T |
6256358 |
ctcaagcctcttttttcaagtctcatgttttctgggaacctgaaatcacaaagtcacaagaatattaaagagaactcgaaaaagggatacaaaatcacaa |
6256457 |
T |
|
| Q |
431 |
gaagaacaaagagaagattatatggtgaattaaattaaaaagaattacatcatgcacaacaagccgcagcgtctacacatccaaacgtggagcctacaat |
530 |
Q |
| |
|
||| |||||||||||||||||||||||||||| ||||||||||||||||| | ||| || || | ||||| ||| ||||||| | || ||||||||| |
|
|
| T |
6256458 |
gaataacaaagagaagattatatggtgaattatattaaaaagaattacat---gtgcaataaacctccgcgtcaacatatccaaatgcggggcctacaat |
6256554 |
T |
|
| Q |
531 |
tgaaccatgcatgagctttatggaagtggaacaaacagtcacatccttctggttgtgcgtgagagcggtggtcatgccattcatctggtcatgaatgaga |
630 |
Q |
| |
|
|| |||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| | |
|
|
| T |
6256555 |
tggaccatgcatgagctttgtggaagtggaacaaacagcgacatccttctggttgtgcatgagagcggtggtcatgccattgatctggtcatgaatgata |
6256654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 766 - 1017
Target Start/End: Original strand, 6914694 - 6914945
Alignment:
| Q |
766 |
ataaacagattggtgaatgtggtgcacctggctataataacatctcatctcagctgccaatcaggaaattgtcacatcaggaatgtgacaaattgtatgc |
865 |
Q |
| |
|
||||||||||| |||||||||||||||||| || |||||||||| |||||||| | ||||| ||||||||||| ||| |||||||||||| ||||| |
|
|
| T |
6914694 |
ataaacagattattgaatgtggtgcacctggatacaataacatctgatctcagcctcaaatcaagaaattgtcacggaagggatgtgacaaattctatgc |
6914793 |
T |
|
| Q |
866 |
caacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaagggagctgggtagaccctcctctggcaagc |
965 |
Q |
| |
|
||||||||||||| |||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
6914794 |
caacgctctccttgctccatttggtacaatttcttaagtaatggacagtcatgaatggacaaagtagaaagggagctgggtagatcctcctccggcaagc |
6914893 |
T |
|
| Q |
966 |
tctcaagacaagggcaatcatcaatatataaagattcaagggaagtgaggtg |
1017 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||| ||||||||||| |
|
|
| T |
6914894 |
gttcaagacaagggcaatcttcaatatatagagattcaagcgaagtgaggtg |
6914945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 810 - 1017
Target Start/End: Complemental strand, 6724471 - 6724264
Alignment:
| Q |
810 |
tcatctcagctgccaatcaggaaattgtcacatcaggaatgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatgg |
909 |
Q |
| |
|
||||| |||| ||||||||||||||||| |||||||||||||||| ||||||||||||| |||| ||||||||||||||||| || ||||| |||||| |
|
|
| T |
6724471 |
tcatcccagccgccaatcaggaaattgttacatcaggaatgtgactaattgtatgccaaagctcagcttcctccttttggtacttctgcttaattaatgg |
6724372 |
T |
|
| Q |
910 |
acagtcatgaattgacaaagtagaaagggagctgggtagaccctcctctggcaagctctcaagacaagggcaatcatcaatatataaagattcaagggaa |
1009 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||| ||| ||||||||| ||| |
|
|
| T |
6724371 |
gcagtcatgaatggacaaagtagaaagggagctgggtagaccctcctctggcaagctgtcaagacaagggcagtcttcaatacatagagattcaagtgaa |
6724272 |
T |
|
| Q |
1010 |
gtgaggtg |
1017 |
Q |
| |
|
|||||||| |
|
|
| T |
6724271 |
gtgaggtg |
6724264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 118 - 250
Target Start/End: Original strand, 6235001 - 6235133
Alignment:
| Q |
118 |
gtatattttatttttaatatgccggtgctgaataataacagccaaaagaaatttgattaaatcacggttcaactatgattggaaaacaccaaatttcact |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
6235001 |
gtatattttatttttaatatgccggtgctgaataataacagccacgagaaatttgattaaatcatggttcaactatgattagaaaataccaaatttcact |
6235100 |
T |
|
| Q |
218 |
gataacaaagtggcataactttcaattttttat |
250 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |
|
|
| T |
6235101 |
gataacaaagtggcaaaactttcaattttttat |
6235133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 484 - 633
Target Start/End: Original strand, 6897374 - 6897523
Alignment:
| Q |
484 |
gcacaacaagccgcagcgtctacacatccaaacgtggagcctacaattgaaccatgcatgagctttatggaagtggaacaaacagtcacatccttctggt |
583 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| || ||||||||||||| |||||||||||||||| ||||||||||| |||||| |||| |||||||| |
|
|
| T |
6897374 |
gcacaacaagtcgcagcgtctacacatccaaatgtcgagcctacaattggaccatgcatgagctttgtggaagtggaataaacagctacatacttctggt |
6897473 |
T |
|
| Q |
584 |
tgtgcgtgagagcggtggtcatgccattcatctggtcatgaatgagaatg |
633 |
Q |
| |
|
|||| |||||||| ||||||||||||||||| |||||| || |||||||| |
|
|
| T |
6897474 |
tgtgtgtgagagcagtggtcatgccattcatttggtcacgagtgagaatg |
6897523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 839 - 983
Target Start/End: Original strand, 5278331 - 5278475
Alignment:
| Q |
839 |
acatcaggaatgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaaggg |
938 |
Q |
| |
|
|||||||| |||||||||||||||| ||||| |||||||||||||||||||||| || ||||| || | |||| ||| |||| ||||||||||||||| |
|
|
| T |
5278331 |
acatcagggatgtgacaaattgtattccaactctctccttcctccttttggtacctctgcttaactattcgacattcacgaatgtacaaagtagaaaggg |
5278430 |
T |
|
| Q |
939 |
agctgggtagaccctcctctggcaagctctcaagacaagggcaat |
983 |
Q |
| |
|
|||| || ||||||||||||||||| | |||||||||||| |||| |
|
|
| T |
5278431 |
agctcggaagaccctcctctggcaatcgctcaagacaaggacaat |
5278475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 6242195 - 6242282
Alignment:
| Q |
148 |
aataataacagccaaaagaaatttgattaaatcacggttcaactatgattggaaaacaccaaatttcactgataacaaagtggcataa |
235 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
6242195 |
aataataacagccacaagaaatttgattaaatcatggttcaactatgattaaaaaacaccaaatttcactgataacaaagtggcataa |
6242282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 449 - 589
Target Start/End: Original strand, 6262991 - 6263128
Alignment:
| Q |
449 |
tatatggtgaattaaattaaaaagaattacatcatgcacaacaagccgcagcgtctacacatccaaacgtggagcctacaattgaaccatgcatgagctt |
548 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||||||| | | ||||| |||||||||||||||| |||| ||| || ||||||||| | ||| |
|
|
| T |
6262991 |
tatatggtgaattaaattaaaaagaattacaa---gcgcaacaagtctccgcgtccacacatccaaacgtggggcctgcaactggaccatgcatcaactt |
6263087 |
T |
|
| Q |
549 |
tatggaagtggaacaaacagtcacatccttctggttgtgcg |
589 |
Q |
| |
|
| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
6263088 |
tgtggaagtggaacaaacagccacatccttctggttgtgcg |
6263128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 13283095 - 13283009
Alignment:
| Q |
14 |
gcataggtcagagggatttcgtaaagtggttcgagagagatatgatcaatgcatatatcttgagttgtttaattattaagccataga |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
13283095 |
gcataagtcagagggatttcgtaaagtggctcgagagagatatgatcaatgcatatatcttgagttgttttattattaggccataga |
13283009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 777 - 978
Target Start/End: Original strand, 5261545 - 5261745
Alignment:
| Q |
777 |
ggtgaatgtggtgcacctggctataataacatctcatctcagctgccaatcaggaaattgtcacatcaggaatgtgacaaattgtatgccaacgctctcc |
876 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||| | | | | |||||||| |||| |||||||| |||||||||||||||| ||||| |||||| |
|
|
| T |
5261545 |
ggtgaatgtggtgcacctggctatagtaag-tctcctttaatccgccaatcaataaataaatacatcagggatgtgacaaattgtattccaactctctcc |
5261643 |
T |
|
| Q |
877 |
ttcctccttttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaagggagctgggtagaccctcctctggcaagctctcaagacaa |
976 |
Q |
| |
|
|||| ||||||||||| || ||||| || |||||| ||| |||| |||| |||||||||||||| || ||||||||||||||||| | |||||||||| |
|
|
| T |
5261644 |
ttccaccttttggtacctctgcttaactattggacattcacgaatatacaatgtagaaagggagctcggaagaccctcctctggcaatcgctcaagacaa |
5261743 |
T |
|
| Q |
977 |
gg |
978 |
Q |
| |
|
|| |
|
|
| T |
5261744 |
gg |
5261745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 6255817 - 6255899
Alignment:
| Q |
99 |
gagagaaccaaaacgtcaagtatattttatttttaatatgccggtgctgaataataacagccaaaagaaatttgattaaatca |
181 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
6255817 |
gagagagccaaaacgacaagtatattttatttttaatatgccggtgcagaataataacagccacaagaaatttgattaaatca |
6255899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 848 - 978
Target Start/End: Complemental strand, 8571303 - 8571173
Alignment:
| Q |
848 |
atgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaagggagctgggta |
947 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||| |||||| ||| || |||||| |||| ||| || ||| | |||||||||||||||| | |||| |
|
|
| T |
8571303 |
atgtgacgaattgtatgccaacgttctccttccttcttttgatacttctccttaagcaatgaacatctattaatggccaaagtagaaagggagattggta |
8571204 |
T |
|
| Q |
948 |
gaccctcctctggcaagctctcaagacaagg |
978 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
8571203 |
gaccctcctctggcaagctctcaagacaagg |
8571173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 848 - 1001
Target Start/End: Original strand, 5296420 - 5296573
Alignment:
| Q |
848 |
atgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaagggagctgggta |
947 |
Q |
| |
|
|||||||||||| |||||||| | | ||||||||||||||||||| | |||||||| ||||||| || ||| |||||| ||||||||||| |||||| |
|
|
| T |
5296420 |
atgtgacaaattttatgccaatgttttccttcctccttttggtaccgttgcttaagtatcggacagttattaatggacaaaatagaaagggagttgggta |
5296519 |
T |
|
| Q |
948 |
gaccctcctctggcaagctctcaagacaagggcaatcatcaatatataaagatt |
1001 |
Q |
| |
|
||| |||||| ||||||| |||||||| | ||||| ||||||||| ||| |||| |
|
|
| T |
5296520 |
gacactcctcaggcaagcactcaagaccaaggcaaccatcaatatgtaaggatt |
5296573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 6139004 - 6139091
Alignment:
| Q |
15 |
cataggtcagagggatttcgtaaagtggttcgaga--gagatatgatcaatgcatatatcttgagttgtttaattattaagccataga |
100 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
6139004 |
cataggtcaaagggatttcgtaaagtggctcgagagagagatatgatcaatgcatatatcttgagttgtttcattattaggccataga |
6139091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 6164321 - 6164403
Alignment:
| Q |
15 |
cataggtcagagggatttcgtaaagtggttcgagagagatatgatcaatgcatatatcttgagttgtttaattattaagccat |
97 |
Q |
| |
|
|||| |||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
6164321 |
cataagtcagagggatttcgtaatgtggctcaagagagatatgatcaatgcatatatcttgagttgtttcattattaggccat |
6164403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 6234110 - 6234178
Alignment:
| Q |
15 |
cataggtcagagggatttcgtaaagtggttcgagagagatatgatcaatgcatatatcttgagttgttt |
83 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
6234110 |
cataggtcagagggatttcgtaaagtgtctcgagagatatatgatcaatgcatatatcttgagttgttt |
6234178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 6241896 - 6241959
Alignment:
| Q |
15 |
cataggtcagagggatttcgtaaagtggttcgagagagatatgatcaatgcatatatcttgagt |
78 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
6241896 |
cataggtcagagggattccgtaaagtggctcgagagagatatgatcaatgcatatatcttgagt |
6241959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 848 - 965
Target Start/End: Complemental strand, 4391267 - 4391150
Alignment:
| Q |
848 |
atgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaagggagctgggta |
947 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||||| || ||||||||||||||| | |||||| |||| |||||||||| | |||| |
|
|
| T |
4391267 |
atgtgacaaattgtatgccagcactctccttcctccttttggtactgctccttaagtaatggacatttatgaatgaacaactgagaaagggagtttggta |
4391168 |
T |
|
| Q |
948 |
gaccctcctctggcaagc |
965 |
Q |
| |
|
|||||| ||| ||||||| |
|
|
| T |
4391167 |
gacccttctccggcaagc |
4391150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 848 - 981
Target Start/End: Original strand, 8587601 - 8587734
Alignment:
| Q |
848 |
atgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaagggagctgggta |
947 |
Q |
| |
|
||||||| || | |||||||||| ||||||||||| ||||||||| || || || |||||| | || ||| ||||||||||||||||| |||||| |
|
|
| T |
8587601 |
atgtgactaactatatgccaacgatctccttcctcgttttggtactgctcctgaaacaatggagaaccactaatccacaaagtagaaagggagttgggta |
8587700 |
T |
|
| Q |
948 |
gaccctcctctggcaagctctcaagacaagggca |
981 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |
|
|
| T |
8587701 |
gaccctcctctggcaagctctcaagactagggca |
8587734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 848 - 983
Target Start/End: Original strand, 5247852 - 5247987
Alignment:
| Q |
848 |
atgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaagggagctgggta |
947 |
Q |
| |
|
||||||| |||||||||||||| ||||||| |||||||||||||| || || ||||||| |||| | |||| ||| |||||||||||| |||| | |
|
|
| T |
5247852 |
atgtgacgaattgtatgccaacactctcctccctccttttggtacttctgctcaagtaattgacaattccgaatctccaatgtagaaagggagttgggaa |
5247951 |
T |
|
| Q |
948 |
gaccctcctctggcaagctctcaagacaagggcaat |
983 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||| |
|
|
| T |
5247952 |
gaccctcctctggcaagcgttcaagactggggcaat |
5247987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 6879541 - 6879624
Alignment:
| Q |
167 |
aatttgattaaatcacggttcaactatgattggaaaacaccaaatttcactgataacaaagtggcataactttcaattttttat |
250 |
Q |
| |
|
|||||| ||||| || ||| | ||||||||| ||||||||||||||||||||||||||||||| ||| || ||||||||||||| |
|
|
| T |
6879541 |
aatttgcttaaaacatggtccgactatgattagaaaacaccaaatttcactgataacaaagtgccatgacattcaattttttat |
6879624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 851 - 965
Target Start/End: Original strand, 5265760 - 5265874
Alignment:
| Q |
851 |
tgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaagggagctgggtagac |
950 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||||| | || | |||| | |||| ||| ||||||||| |
|
|
| T |
5265760 |
tgacaaatcgtatgccaacgctctccttcctccttttggtactgctccttaattaatggacagttaagactcaacaactgataaagtgagttgggtagac |
5265859 |
T |
|
| Q |
951 |
cctcctctggcaagc |
965 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
5265860 |
cgtcctctggcaagc |
5265874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 6255127 - 6255185
Alignment:
| Q |
18 |
aggtcagagggatttcgtaaagtggttcgagagagatatgatcaatgcatatatcttga |
76 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
6255127 |
aggtcagagggatttcgtaaagtgactcgagagagatatgatcaatgcttatatcttga |
6255185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 838 - 995
Target Start/End: Original strand, 8469225 - 8469385
Alignment:
| Q |
838 |
cacatcaggaatgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaagg |
937 |
Q |
| |
|
||||||||||| |||||||||||||| ||| ||||| ||| || ||||||||| || |||||||||||||| | |||| ||||| |||||||| |
|
|
| T |
8469225 |
cacatcaggaaagtgacaaattgtatcccacggctcttctttcttgttttggtacttctccttaagtaatggactatttagaatgtacaaattagaaagg |
8469324 |
T |
|
| Q |
938 |
gagctgggtagaccctc---ctctggcaagctctcaagacaagggcaatcatcaatatata |
995 |
Q |
| |
|
||| ||||||||||||| ||||||||||| |||||||| |||||| || ||||||||| |
|
|
| T |
8469325 |
gagttgggtagaccctccttctctggcaagcactcaagactagggcagtcgacaatatata |
8469385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 6256186 - 6256249
Alignment:
| Q |
184 |
gttcaactatgattggaaaacaccaaatttcactgataacaaagtggcataactttcaatttttt |
248 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||||||||| |
|
|
| T |
6256186 |
gttcaactatgattagaaaa-accaaatttcactggtaacaaagtgacataactttcaatttttt |
6256249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 435 - 630
Target Start/End: Complemental strand, 6724837 - 6724637
Alignment:
| Q |
435 |
aacaaagagaagattatatggtgaattaaattaaaa-agaattacatcatgcacaacaagccgcagcgtctacacatccaaacgtggagcctacaattga |
533 |
Q |
| |
|
||||||||| | ||||| ||||||| ||||| |||| ||||||||| ||||||||| ||||||||| |||||||||||| |||| || |||||||| |
|
|
| T |
6724837 |
aacaaagaggatattatctggtgaagtaaataaaaagagaattacaa---gcacaacaaaccgcagcgtgtacacatccaaatgtggggcatacaattgc |
6724741 |
T |
|
| Q |
534 |
accatgcatgagctttatggaagtggaacaaacagtca-------catccttctggttgtgcgtgagagcggtggtcatgccattcatctggtcatgaat |
626 |
Q |
| |
|
||||| | |||||| | ||| | |||| ||||| || ||| |||||||||||||||||||| ||||| ||||||||||||||||| |||| |
|
|
| T |
6724740 |
accatacttgagctctgtggcgggggaataaacaagcaacagaggcattcttctggttgtgcgtgagaggagtggttgtgccattcatctggtcacgaat |
6724641 |
T |
|
| Q |
627 |
gaga |
630 |
Q |
| |
|
|||| |
|
|
| T |
6724640 |
gaga |
6724637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 848 - 974
Target Start/End: Original strand, 8452322 - 8452448
Alignment:
| Q |
848 |
atgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaagggagctgggta |
947 |
Q |
| |
|
|||||||||||||||| || |||||||| |||||||||||||| | ||||| ||||||||| || | ||| ||||| || |||||||| |||||| |
|
|
| T |
8452322 |
atgtgacaaattgtatcccgctgctctcctccctccttttggtacttcaccttaattaatggacaatctttaatccacaaactataaagggagttgggta |
8452421 |
T |
|
| Q |
948 |
gaccctcctctggcaagctctcaagac |
974 |
Q |
| |
|
|| | |||||||| || |||||||||| |
|
|
| T |
8452422 |
gagcttcctctggtaatctctcaagac |
8452448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 848 - 887
Target Start/End: Complemental strand, 6782686 - 6782647
Alignment:
| Q |
848 |
atgtgacaaattgtatgccaacgctctccttcctcctttt |
887 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
6782686 |
atgtgacaaattgtatgccaacgctctcctccctcctttt |
6782647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 848 - 887
Target Start/End: Original strand, 6941611 - 6941650
Alignment:
| Q |
848 |
atgtgacaaattgtatgccaacgctctccttcctcctttt |
887 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
6941611 |
atgtgacaaattgtatgccaacgctctcctccctcctttt |
6941650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 848 - 887
Target Start/End: Original strand, 6944724 - 6944763
Alignment:
| Q |
848 |
atgtgacaaattgtatgccaacgctctccttcctcctttt |
887 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
6944724 |
atgtgacaaattgtatgccaacgctctcctccctcctttt |
6944763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 848 - 981
Target Start/End: Original strand, 6944943 - 6945079
Alignment:
| Q |
848 |
atgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaagggagctgggta |
947 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||||||| ||| || ||| | || | ||| || | ||| ||||||| |||||||| |||||| |
|
|
| T |
6944943 |
atgtgactaattgtatgccaacgctctcctccctccttttcatacttctcctttattattccacattcttcaatccgcaaagtataaagggagttgggta |
6945042 |
T |
|
| Q |
948 |
gaccctc---ctctggcaagctctcaagacaagggca |
981 |
Q |
| |
|
|| |||| |||||||||||||||||||| |||||| |
|
|
| T |
6945043 |
gatcctccttctctggcaagctctcaagactagggca |
6945079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 838 - 887
Target Start/End: Complemental strand, 6557082 - 6557033
Alignment:
| Q |
838 |
cacatcaggaatgtgacaaattgtatgccaacgctctccttcctcctttt |
887 |
Q |
| |
|
||||| ||| ||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
6557082 |
cacataagggatgtgactaattgtatgccaacgctctcctccctcctttt |
6557033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 564 - 633
Target Start/End: Original strand, 6914455 - 6914524
Alignment:
| Q |
564 |
aacagtcacatccttctggttgtgcgtgagagcggtggtcatgccattcatctggtcatgaatgagaatg |
633 |
Q |
| |
|
|||||| |||||||||||||| | || ||||| |||||| ||||||||||||||||| ||||| ||||| |
|
|
| T |
6914455 |
aacagtgacatccttctggttacgtgtaagagcagtggtcgtgccattcatctggtcacgaatgggaatg |
6914524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 838 - 887
Target Start/End: Original strand, 7585536 - 7585585
Alignment:
| Q |
838 |
cacatcaggaatgtgacaaattgtatgccaacgctctccttcctcctttt |
887 |
Q |
| |
|
|||| |||| ||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
7585536 |
cacaccagggatgtgactaattgtatgccaacgctctcctccctcctttt |
7585585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 924 - 995
Target Start/End: Complemental strand, 6523764 - 6523690
Alignment:
| Q |
924 |
acaaagtagaaagggagctgggtagaccctcct---ctggcaagctctcaagacaagggcaatcatcaatatata |
995 |
Q |
| |
|
||||||||| ||||||| |||||||| |||||| |||||||||||||||||| ||| || || |||||||||| |
|
|
| T |
6523764 |
acaaagtagtaagggagttgggtagatcctccttctctggcaagctctcaagactaggacagtcttcaatatata |
6523690 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 862 - 974
Target Start/End: Complemental strand, 6731063 - 6730951
Alignment:
| Q |
862 |
atgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattgacaaagtagaaagggagctgggtagaccctcctctggc |
961 |
Q |
| |
|
|||||||||||||||||| || || ||||| || ||||| ||||||||| ||| || ||||| |||| || ||||| ||||||||||||||||| |
|
|
| T |
6731063 |
atgccaacgctctccttcatctcttcggtactgctgcttaattaatggacaatcagtaacatacaaactagagagcgagctccgtagaccctcctctggc |
6730964 |
T |
|
| Q |
962 |
aagctctcaagac |
974 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
6730963 |
aagcgctcaagac |
6730951 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 848 - 887
Target Start/End: Original strand, 6733346 - 6733385
Alignment:
| Q |
848 |
atgtgacaaattgtatgccaacgctctccttcctcctttt |
887 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
6733346 |
atgtgactaattgtatgccaacgctctcctccctcctttt |
6733385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 306 - 344
Target Start/End: Original strand, 6235154 - 6235192
Alignment:
| Q |
306 |
atatccacaccttataattggtaaacacaagtaattctc |
344 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
6235154 |
atatcctcaccttataattggtagacacaagtaattctc |
6235192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 851 - 889
Target Start/End: Complemental strand, 6482279 - 6482241
Alignment:
| Q |
851 |
tgacaaattgtatgccaacgctctccttcctccttttgg |
889 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
6482279 |
tgacaaattgtatgccaccgctctcgttcctccttttgg |
6482241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 837 - 887
Target Start/End: Complemental strand, 6530895 - 6530845
Alignment:
| Q |
837 |
tcacatcaggaatgtgacaaattgtatgccaacgctctccttcctcctttt |
887 |
Q |
| |
|
|||| ||||| ||||||| |||||||||||||||||||| | ||||||||| |
|
|
| T |
6530895 |
tcacttcagggatgtgaccaattgtatgccaacgctctcgtccctcctttt |
6530845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 842 - 887
Target Start/End: Complemental strand, 6841938 - 6841893
Alignment:
| Q |
842 |
tcaggaatgtgacaaattgtatgccaacgctctccttcctcctttt |
887 |
Q |
| |
|
||||| ||||||| |||||| ||||||||||||||| ||||||||| |
|
|
| T |
6841938 |
tcagggatgtgactaattgtgtgccaacgctctcctccctcctttt |
6841893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 173; Significance: 2e-92; HSPs: 2)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 724 - 1016
Target Start/End: Complemental strand, 13968 - 13678
Alignment:
| Q |
724 |
atttttactatttaaaagaaaatttacaaatgtttgacaactataaacagattggtgaatgtggtgcacctggctataataacatctcatctcagctgcc |
823 |
Q |
| |
|
||||||||||| ||| ||||| | ||| |||||||||||| |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
13968 |
atttttactatctaagagaaa-tatactaatgtttgacaagtataaacagactgggaaatgtggtgcacctggctacaataacatctcatctcagccgcc |
13870 |
T |
|
| Q |
824 |
aatcaggaaattgtcacatcaggaatgtgacaaattgtatgccaacgctctccttcctccttttggtacaacttcttaagtaatggacagtcatgaattg |
923 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||| |||||||| || ||||| |||||||||||||||||| | |
|
|
| T |
13869 |
aatcaggaaattgtcacatcaggaa-gtgactaattgtatgccaatgctctccttcctccctttggtacttctgcttaattaatggacagtcatgaatgg |
13771 |
T |
|
| Q |
924 |
acaaagtagaaagggagctgggtagaccctcctctggcaagctctcaagacaagggcaatcatcaatatataaagattcaagggaagtgaggt |
1016 |
Q |
| |
|
|| ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||| |
|
|
| T |
13770 |
actaagtagaaagggatctgggaagaccctcctccggcaagctctcaagacaagggcaatcttcaatatatagagattcaagcaaagtgaggt |
13678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 250
Target Start/End: Complemental strand, 14553 - 14416
Alignment:
| Q |
115 |
caagtatattttatttttaatatgccggtgctgaataataacagccaaaagaaatttgattaaatcacggttcaactatgattggaaaacaccaaatttc |
214 |
Q |
| |
|
||||||||||| ||||||||||| ||||| ||||| || ||| || | | |||||||||| |||| | | ||| ||| ||| |||||||||||||||| |
|
|
| T |
14553 |
caagtatatttactttttaatatgacggtgaagaatattatcagtcacatggaatttgattagatcatgatacaagtatcattagaaaacaccaaatttc |
14454 |
T |
|
| Q |
215 |
ac--tgataacaaagtggcataactttcaattttttat |
250 |
Q |
| |
|
|| ||| |||||||||||| || ||||||||||||| |
|
|
| T |
14453 |
actttgacaacaaagtggcacgaccttcaattttttat |
14416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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