View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17615_low_20 (Length: 434)

Name: NF17615_low_20
Description: NF17615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17615_low_20
NF17615_low_20
[»] chr7 (66 HSPs)
chr7 (294-420)||(4680875-4681001)
chr7 (294-421)||(11649986-11650113)
chr7 (294-421)||(23591391-23591519)
chr7 (288-421)||(12140838-12140972)
chr7 (293-421)||(16671604-16671733)
chr7 (293-421)||(17645972-17646101)
chr7 (296-423)||(11646185-11646312)
chr7 (294-421)||(9141937-9142066)
chr7 (294-420)||(22773890-22774015)
chr7 (294-421)||(48640777-48640906)
chr7 (294-420)||(2526931-2527059)
chr7 (294-421)||(11646374-11646502)
chr7 (294-421)||(18486634-18486762)
chr7 (294-423)||(16492520-16492649)
chr7 (290-421)||(22324280-22324412)
chr7 (294-421)||(27716508-27716636)
chr7 (294-420)||(45419614-45419741)
chr7 (294-423)||(48640991-48641121)
chr7 (294-419)||(34837187-34837315)
chr7 (294-420)||(19222105-19222233)
chr7 (317-421)||(4681121-4681227)
chr7 (294-400)||(27716308-27716414)
chr7 (294-421)||(21224138-21224266)
chr7 (294-421)||(23591608-23591736)
chr7 (323-421)||(18487180-18487279)
chr7 (287-421)||(40450078-40450213)
chr7 (295-420)||(45419820-45419947)
chr7 (294-421)||(2354641-2354770)
chr7 (294-400)||(11645930-11646036)
chr7 (289-421)||(35124720-35124853)
chr7 (294-410)||(46264272-46264389)
chr7 (294-411)||(30991459-30991578)
chr7 (294-423)||(4681573-4681699)
chr7 (294-421)||(48641417-48641546)
chr7 (294-421)||(16671246-16671375)
chr7 (294-421)||(17645614-17645743)
chr7 (286-377)||(32278158-32278249)
chr7 (294-420)||(34837442-34837568)
chr7 (297-420)||(2853195-2853320)
chr7 (288-384)||(9142148-9142244)
chr7 (294-372)||(11646627-11646705)
chr7 (294-400)||(21128040-21128146)
chr7 (326-410)||(43059223-43059308)
chr7 (315-423)||(1566482-1566593)
chr7 (294-421)||(4454924-4455052)
chr7 (317-421)||(16362667-16362772)
chr7 (323-399)||(40686892-40686967)
chr7 (294-361)||(23591237-23591304)
chr7 (294-347)||(34837388-34837441)
chr7 (371-421)||(9395804-9395855)
chr7 (294-340)||(34837655-34837701)
chr7 (294-351)||(6249840-6249897)
chr7 (373-421)||(6249896-6249945)
chr7 (294-343)||(46264086-46264135)
chr7 (395-423)||(4455240-4455268)
chr7 (251-291)||(5194286-5194326)
chr7 (251-291)||(5810979-5811019)
chr7 (251-291)||(24001067-24001107)
chr7 (251-291)||(26898457-26898497)
chr7 (251-291)||(27535286-27535326)
chr7 (251-291)||(31408688-31408728)
chr7 (251-291)||(40236924-40236964)
chr7 (251-291)||(41861679-41861719)
chr7 (251-291)||(42538486-42538526)
chr7 (251-291)||(43317448-43317488)
chr7 (251-291)||(44326183-44326223)
[»] chr6 (39 HSPs)
chr6 (290-421)||(9828915-9829047)
chr6 (294-421)||(25068188-25068317)
chr6 (294-423)||(4811037-4811168)
chr6 (294-423)||(17202850-17202980)
chr6 (294-416)||(17906784-17906906)
chr6 (294-421)||(25067962-25068090)
chr6 (294-420)||(17201597-17201724)
chr6 (294-420)||(23610432-23610559)
chr6 (294-420)||(27579598-27579725)
chr6 (294-420)||(4100293-4100424)
chr6 (289-427)||(808467-808605)
chr6 (290-420)||(27315283-27315413)
chr6 (294-423)||(17199986-17200115)
chr6 (294-420)||(808829-808958)
chr6 (294-416)||(23622218-23622341)
chr6 (294-423)||(32208383-32208513)
chr6 (325-420)||(17202661-17202758)
chr6 (294-421)||(26832494-26832622)
chr6 (294-421)||(15130899-15131029)
chr6 (294-423)||(29201558-29201676)
chr6 (294-423)||(17080035-17080166)
chr6 (315-420)||(23902528-23902634)
chr6 (294-420)||(808693-808811)
chr6 (315-370)||(17011130-17011185)
chr6 (296-358)||(1393582-1393644)
chr6 (294-340)||(4125709-4125755)
chr6 (296-382)||(8685155-8685236)
chr6 (296-382)||(8674476-8674557)
chr6 (337-398)||(32208573-32208634)
chr6 (295-343)||(17011026-17011074)
chr6 (251-291)||(27441547-27441587)
chr6 (294-341)||(19121169-19121216)
chr6 (294-340)||(17010917-17010963)
chr6 (290-340)||(33482438-33482488)
chr6 (251-291)||(9698388-9698428)
chr6 (294-338)||(25068140-25068184)
chr6 (251-291)||(26466804-26466844)
chr6 (251-291)||(26670064-26670104)
chr6 (251-291)||(31109277-31109317)
[»] chr4 (67 HSPs)
chr4 (294-421)||(48076190-48076318)
chr4 (294-421)||(23952483-23952610)
chr4 (294-423)||(36639172-36639302)
chr4 (297-421)||(48076371-48076496)
chr4 (290-420)||(4941674-4941805)
chr4 (294-421)||(23952758-23952886)
chr4 (294-421)||(54653627-54653755)
chr4 (290-423)||(2177260-2177394)
chr4 (294-421)||(47768952-47769081)
chr4 (287-421)||(2481629-2481761)
chr4 (294-421)||(22292898-22293025)
chr4 (294-420)||(53144824-53144951)
chr4 (294-421)||(7821303-7821431)
chr4 (294-421)||(28379740-28379867)
chr4 (290-421)||(52689596-52689728)
chr4 (294-421)||(21585535-21585662)
chr4 (294-420)||(24049565-24049692)
chr4 (294-420)||(43161719-43161846)
chr4 (294-421)||(7796785-7796913)
chr4 (294-411)||(48076545-48076664)
chr4 (297-396)||(44500675-44500774)
chr4 (294-423)||(12796096-12796226)
chr4 (294-421)||(7821519-7821647)
chr4 (294-423)||(29967179-29967310)
chr4 (305-421)||(8118608-8118725)
chr4 (294-421)||(8397720-8397848)
chr4 (294-417)||(36639345-36639469)
chr4 (294-421)||(47631360-47631488)
chr4 (294-421)||(8118383-8118510)
chr4 (289-400)||(28389771-28389882)
chr4 (294-419)||(7809348-7809474)
chr4 (325-421)||(21581253-21581351)
chr4 (304-421)||(22292701-22292819)
chr4 (294-423)||(28813225-28813355)
chr4 (294-423)||(28379956-28380077)
chr4 (294-400)||(32010682-32010789)
chr4 (319-423)||(43161898-43162006)
chr4 (336-421)||(8479122-8479206)
chr4 (294-421)||(47631539-47631667)
chr4 (302-420)||(47428394-47428513)
chr4 (323-416)||(7809561-7809655)
chr4 (289-421)||(8079013-8079146)
chr4 (326-400)||(8079327-8079401)
chr4 (297-365)||(15456295-15456363)
chr4 (297-365)||(15463679-15463747)
chr4 (294-352)||(24046065-24046123)
chr4 (348-421)||(24049337-24049411)
chr4 (299-397)||(8078897-8078997)
chr4 (288-423)||(7526420-7526556)
chr4 (357-421)||(41852121-41852188)
chr4 (294-343)||(2526941-2526990)
chr4 (294-339)||(23952613-23952658)
chr4 (294-339)||(23952661-23952706)
chr4 (294-340)||(8079456-8079502)
chr4 (251-291)||(711965-712005)
chr4 (251-291)||(1771321-1771361)
chr4 (251-291)||(3756301-3756341)
chr4 (251-291)||(28988478-28988518)
chr4 (294-350)||(18002111-18002170)
chr4 (294-343)||(47428298-47428347)
chr4 (251-291)||(960925-960965)
chr4 (251-291)||(17619207-17619247)
chr4 (251-291)||(32728362-32728402)
chr4 (251-291)||(41878411-41878451)
chr4 (251-291)||(43514741-43514781)
chr4 (251-291)||(46827761-46827801)
chr4 (251-291)||(55966401-55966441)
[»] chr1 (64 HSPs)
chr1 (294-423)||(51113906-51114036)
chr1 (294-423)||(27296162-27296291)
chr1 (294-421)||(318555-318683)
chr1 (294-421)||(1156043-1156171)
chr1 (294-421)||(44263089-44263217)
chr1 (294-421)||(5428528-5428655)
chr1 (294-421)||(42492142-42492271)
chr1 (290-415)||(44262660-44262785)
chr1 (294-411)||(51114090-51114208)
chr1 (294-420)||(38684015-38684142)
chr1 (294-421)||(16165663-16165792)
chr1 (294-421)||(51113723-51113852)
chr1 (294-421)||(27296337-27296465)
chr1 (290-420)||(21617752-21617883)
chr1 (294-421)||(42497267-42497397)
chr1 (294-421)||(3227200-3227328)
chr1 (294-421)||(52740700-52740829)
chr1 (294-398)||(42496935-42497039)
chr1 (294-420)||(1647543-1647670)
chr1 (295-421)||(4100565-4100691)
chr1 (294-420)||(44263310-44263437)
chr1 (294-406)||(5428933-5429046)
chr1 (289-421)||(5429043-5429180)
chr1 (298-421)||(6537629-6537757)
chr1 (296-421)||(28950148-28950274)
chr1 (294-421)||(18912327-18912456)
chr1 (294-382)||(28950277-28950365)
chr1 (294-420)||(42497448-42497574)
chr1 (294-400)||(51272492-51272598)
chr1 (296-416)||(28949875-28949995)
chr1 (302-420)||(4100771-4100890)
chr1 (323-421)||(44099650-44099747)
chr1 (294-421)||(30083978-30084107)
chr1 (293-400)||(18912214-18912322)
chr1 (294-385)||(33375630-33375721)
chr1 (302-420)||(24595066-24595187)
chr1 (294-400)||(42497111-42497217)
chr1 (326-423)||(52584966-52585064)
chr1 (294-371)||(28950016-28950093)
chr1 (345-421)||(45417578-45417655)
chr1 (348-423)||(12115359-12115435)
chr1 (321-387)||(24595255-24595321)
chr1 (294-421)||(43761946-43762075)
chr1 (294-365)||(6537465-6537536)
chr1 (294-349)||(42492280-42492335)
chr1 (298-340)||(45417699-45417741)
chr1 (372-421)||(47790726-47790778)
chr1 (289-334)||(47790691-47790736)
chr1 (294-343)||(48552883-48552932)
chr1 (294-343)||(48552992-48553041)
chr1 (251-291)||(14427352-14427392)
chr1 (251-291)||(35003299-35003339)
chr1 (251-291)||(44112682-44112722)
chr1 (251-291)||(48119633-48119673)
chr1 (323-382)||(48411972-48412031)
chr1 (372-416)||(11928235-11928277)
chr1 (294-346)||(52584880-52584930)
chr1 (251-291)||(5489781-5489821)
chr1 (393-421)||(24595313-24595341)
chr1 (251-291)||(38113250-38113290)
chr1 (251-291)||(38335923-38335963)
chr1 (251-291)||(41065158-41065198)
chr1 (251-291)||(43571141-43571181)
chr1 (294-334)||(52740915-52740955)
[»] chr3 (55 HSPs)
chr3 (294-421)||(46451470-46451598)
chr3 (294-421)||(47503031-47503159)
chr3 (290-420)||(53047567-53047697)
chr3 (294-423)||(18094956-18095086)
chr3 (294-421)||(837181-837309)
chr3 (294-421)||(36643105-36643233)
chr3 (296-417)||(43017273-43017396)
chr3 (294-420)||(38887343-38887471)
chr3 (291-421)||(35560098-35560230)
chr3 (289-423)||(11454200-11454335)
chr3 (294-423)||(18094741-18094871)
chr3 (294-409)||(11454562-11454679)
chr3 (298-421)||(37760501-37760625)
chr3 (294-421)||(40050850-40050977)
chr3 (294-421)||(20877194-20877322)
chr3 (294-421)||(38887556-38887686)
chr3 (294-421)||(47503204-47503333)
chr3 (294-400)||(45514419-45514524)
chr3 (294-421)||(11454381-11454512)
chr3 (323-421)||(47519955-47520054)
chr3 (294-400)||(16015250-16015356)
chr3 (296-420)||(43819330-43819455)
chr3 (331-421)||(46451320-46451412)
chr3 (298-383)||(47519871-47519956)
chr3 (294-389)||(38887806-38887901)
chr3 (295-421)||(21968986-21969111)
chr3 (295-421)||(21991422-21991547)
chr3 (294-409)||(11453937-11454054)
chr3 (323-400)||(24365763-24365840)
chr3 (294-421)||(11522532-11522662)
chr3 (297-423)||(11220780-11220906)
chr3 (294-400)||(46451078-46451181)
chr3 (330-423)||(52300747-52300841)
chr3 (294-398)||(850932-851036)
chr3 (324-388)||(51654074-51654138)
chr3 (294-421)||(3847825-3847945)
chr3 (368-416)||(851039-851088)
chr3 (294-416)||(25917426-25917546)
chr3 (294-341)||(46451252-46451299)
chr3 (349-386)||(54274787-54274824)
chr3 (251-291)||(4190320-4190360)
chr3 (290-398)||(17755732-17755840)
chr3 (290-398)||(19057052-19057160)
chr3 (251-291)||(25413686-25413726)
chr3 (251-291)||(54246203-54246243)
chr3 (368-421)||(54274725-54274779)
chr3 (251-291)||(9434129-9434169)
chr3 (251-291)||(10457947-10457987)
chr3 (251-291)||(36150135-36150175)
chr3 (251-291)||(40480754-40480794)
chr3 (251-291)||(42100693-42100733)
chr3 (251-291)||(45126983-45127023)
chr3 (251-291)||(47191080-47191120)
chr3 (251-291)||(53581913-53581953)
chr3 (251-291)||(54237101-54237141)
[»] chr2 (58 HSPs)
chr2 (294-421)||(28612211-28612339)
chr2 (294-421)||(28611786-28611914)
chr2 (290-421)||(41995731-41995863)
chr2 (290-420)||(44256469-44256600)
chr2 (294-421)||(10129475-10129603)
chr2 (294-420)||(6348072-6348199)
chr2 (289-421)||(37131466-37131598)
chr2 (322-421)||(5001677-5001777)
chr2 (294-423)||(28612633-28612761)
chr2 (294-421)||(11735910-11736037)
chr2 (294-421)||(28612846-28612975)
chr2 (294-421)||(28611999-28612127)
chr2 (294-420)||(29550133-29550265)
chr2 (318-420)||(11736325-11736428)
chr2 (294-421)||(3249777-3249905)
chr2 (294-421)||(5001499-5001627)
chr2 (294-421)||(28612424-28612551)
chr2 (297-420)||(41326372-41326496)
chr2 (294-398)||(44543717-44543821)
chr2 (294-385)||(627537-627628)
chr2 (294-400)||(12898023-12898129)
chr2 (296-421)||(29549960-29550086)
chr2 (295-388)||(5013208-5013301)
chr2 (294-398)||(44543928-44544032)
chr2 (294-420)||(3249561-3249688)
chr2 (332-421)||(5001352-5001442)
chr2 (332-421)||(5013022-5013112)
chr2 (294-421)||(29549791-29549919)
chr2 (347-423)||(627629-627706)
chr2 (316-421)||(11657474-11657576)
chr2 (294-416)||(12896407-12896532)
chr2 (336-421)||(6347935-6348020)
chr2 (357-421)||(20708899-20708964)
chr2 (315-401)||(19640327-19640414)
chr2 (315-401)||(19838920-19839007)
chr2 (368-421)||(44543660-44543714)
chr2 (294-365)||(2132238-2132309)
chr2 (251-291)||(966889-966929)
chr2 (251-291)||(1750419-1750459)
chr2 (251-291)||(11825709-11825749)
chr2 (251-291)||(16803973-16804013)
chr2 (251-291)||(16843255-16843295)
chr2 (251-291)||(18491710-18491750)
chr2 (251-291)||(41282029-41282069)
chr2 (251-291)||(43114562-43114602)
chr2 (294-416)||(17930465-17930585)
chr2 (253-291)||(7070421-7070459)
chr2 (372-416)||(15256548-15256590)
chr2 (325-366)||(17370109-17370150)
chr2 (294-350)||(20641641-20641700)
chr2 (251-291)||(4299475-4299515)
chr2 (395-423)||(11736228-11736256)
chr2 (251-291)||(12302308-12302348)
chr2 (251-291)||(12415515-12415555)
chr2 (251-291)||(12427575-12427615)
chr2 (251-291)||(16096752-16096792)
chr2 (251-291)||(34817831-34817871)
chr2 (251-291)||(43490456-43490496)
[»] chr8 (65 HSPs)
chr8 (294-421)||(1197878-1198005)
chr8 (297-421)||(27853648-27853773)
chr8 (294-400)||(23828127-23828233)
chr8 (292-421)||(23838321-23838451)
chr8 (294-421)||(3459113-3459241)
chr8 (289-421)||(23085855-23085989)
chr8 (294-421)||(29580017-29580144)
chr8 (290-421)||(23960778-23960909)
chr8 (294-420)||(32062815-32062945)
chr8 (294-421)||(37198276-37198404)
chr8 (294-421)||(33198833-33198960)
chr8 (294-421)||(35617681-35617811)
chr8 (294-420)||(37410051-37410178)
chr8 (296-421)||(39922066-39922192)
chr8 (289-421)||(40399472-40399605)
chr8 (322-421)||(38111372-38111472)
chr8 (294-421)||(44429050-44429177)
chr8 (294-400)||(23830945-23831051)
chr8 (294-421)||(23960560-23960687)
chr8 (322-421)||(34947504-34947603)
chr8 (294-421)||(30439021-30439151)
chr8 (294-421)||(37197884-37198018)
chr8 (294-400)||(37198113-37198220)
chr8 (294-416)||(37197662-37197783)
chr8 (294-421)||(13797442-13797570)
chr8 (294-421)||(2084876-2085005)
chr8 (290-400)||(37426112-37426222)
chr8 (294-421)||(44433629-44433757)
chr8 (294-423)||(44429894-44430024)
chr8 (302-420)||(42045644-42045764)
chr8 (302-387)||(18308258-18308343)
chr8 (288-398)||(43419032-43419138)
chr8 (294-360)||(23838176-23838242)
chr8 (294-421)||(33198603-33198729)
chr8 (294-423)||(604652-604781)
chr8 (294-421)||(44430067-44430196)
chr8 (294-421)||(44430418-44430547)
chr8 (294-421)||(44433802-44433931)
chr8 (373-421)||(44014524-44014572)
chr8 (297-416)||(604485-604606)
chr8 (349-421)||(1276501-1276574)
chr8 (333-421)||(3990184-3990273)
chr8 (294-421)||(44429224-44429353)
chr8 (294-421)||(44433976-44434105)
chr8 (294-350)||(39921960-39922016)
chr8 (294-340)||(37197788-37197834)
chr8 (294-421)||(44430241-44430370)
chr8 (289-343)||(34345139-34345193)
chr8 (294-340)||(39922226-39922272)
chr8 (294-352)||(44434153-44434211)
chr8 (363-421)||(38111190-38111249)
chr8 (372-421)||(604825-604875)
chr8 (251-291)||(30912617-30912657)
chr8 (251-291)||(35181521-35181561)
chr8 (251-291)||(42699262-42699302)
chr8 (373-423)||(604969-605020)
chr8 (294-383)||(604344-604434)
chr8 (362-423)||(23831131-23831193)
chr8 (251-291)||(11582771-11582811)
chr8 (251-291)||(20148765-20148805)
chr8 (251-291)||(29705367-29705407)
chr8 (251-291)||(33630048-33630088)
chr8 (251-291)||(34304793-34304833)
chr8 (251-291)||(36743538-36743578)
chr8 (251-291)||(42295200-42295240)
[»] chr5 (54 HSPs)
chr5 (293-423)||(12442128-12442259)
chr5 (294-421)||(11313979-11314108)
chr5 (294-421)||(35159704-35159831)
chr5 (289-421)||(7127554-7127687)
chr5 (290-423)||(7673193-7673329)
chr5 (294-421)||(16528600-16528728)
chr5 (294-421)||(26523137-26523265)
chr5 (294-421)||(43394931-43395058)
chr5 (286-423)||(19121899-19122037)
chr5 (299-421)||(11313807-11313930)
chr5 (294-420)||(24351450-24351577)
chr5 (294-421)||(31487062-31487189)
chr5 (294-400)||(16529135-16529241)
chr5 (306-421)||(16528793-16528909)
chr5 (294-423)||(16528959-16529087)
chr5 (290-420)||(35159415-35159545)
chr5 (294-421)||(11313640-11313770)
chr5 (286-421)||(19122235-19122371)
chr5 (294-420)||(41093047-41093175)
chr5 (317-420)||(24350897-24351001)
chr5 (294-400)||(9488069-9488175)
chr5 (294-423)||(10409525-10409655)
chr5 (292-421)||(31486813-31486943)
chr5 (294-421)||(41092869-41092995)
chr5 (294-421)||(14166159-14166289)
chr5 (294-400)||(16526197-16526304)
chr5 (294-421)||(23138032-23138161)
chr5 (294-423)||(13105150-13105284)
chr5 (294-387)||(26523268-26523361)
chr5 (294-421)||(13035177-13035309)
chr5 (323-421)||(43395106-43395207)
chr5 (294-423)||(16305348-16305476)
chr5 (315-378)||(24326546-24326609)
chr5 (315-378)||(24350732-24350795)
chr5 (315-378)||(24351286-24351349)
chr5 (321-423)||(38004643-38004744)
chr5 (294-421)||(26523413-26523542)
chr5 (294-339)||(7673100-7673145)
chr5 (294-341)||(38109886-38109933)
chr5 (373-423)||(38109946-38109997)
chr5 (294-343)||(22431585-22431634)
chr5 (251-291)||(33855098-33855138)
chr5 (294-338)||(38268880-38268924)
chr5 (380-421)||(24271122-24271164)
chr5 (380-421)||(24325983-24326025)
chr5 (380-421)||(24347744-24347786)
chr5 (251-291)||(2614704-2614744)
chr5 (251-291)||(7617138-7617178)
chr5 (395-423)||(14165946-14165974)
chr5 (251-291)||(18033987-18034027)
chr5 (251-291)||(22512310-22512350)
chr5 (251-291)||(25915042-25915082)
chr5 (251-291)||(32473449-32473489)
chr5 (251-291)||(41334718-41334758)
[»] scaffold0018 (2 HSPs)
scaffold0018 (294-417)||(163784-163908)
scaffold0018 (297-339)||(163228-163270)
[»] scaffold0504 (1 HSPs)
scaffold0504 (294-407)||(1526-1640)
[»] scaffold0013 (1 HSPs)
scaffold0013 (290-421)||(102701-102831)
[»] scaffold0240 (2 HSPs)
scaffold0240 (294-423)||(13092-13224)
scaffold0240 (328-421)||(13285-13379)
[»] scaffold0294 (1 HSPs)
scaffold0294 (289-397)||(12386-12496)
[»] scaffold0320 (1 HSPs)
scaffold0320 (288-417)||(14562-14692)
[»] scaffold0001 (1 HSPs)
scaffold0001 (294-418)||(196680-196803)
[»] scaffold0097 (1 HSPs)
scaffold0097 (357-421)||(12735-12800)
[»] scaffold1155 (2 HSPs)
scaffold1155 (373-421)||(1104-1152)
scaffold1155 (326-386)||(958-1018)
[»] scaffold0105 (2 HSPs)
scaffold0105 (373-421)||(29867-29915)
scaffold0105 (326-386)||(29721-29781)
[»] scaffold0345 (2 HSPs)
scaffold0345 (373-421)||(9064-9113)
scaffold0345 (326-386)||(9199-9259)
[»] scaffold0003 (1 HSPs)
scaffold0003 (251-291)||(45774-45814)
[»] scaffold0432 (1 HSPs)
scaffold0432 (294-339)||(5370-5415)
[»] scaffold0318 (1 HSPs)
scaffold0318 (294-343)||(5996-6045)
[»] scaffold0385 (1 HSPs)
scaffold0385 (251-291)||(11256-11296)
[»] scaffold0187 (2 HSPs)
scaffold0187 (251-291)||(14243-14283)
scaffold0187 (251-291)||(24571-24611)
[»] scaffold0119 (1 HSPs)
scaffold0119 (251-291)||(690-730)


Alignment Details
Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 4681001 - 4680875
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4681001 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 4680902  T
Q  394 taaaaaatgcatcgcaccaatttcatt 420  Q
    |||||||||||||||||||||||||||    
T  4680901 taaaaaatgcatcgcaccaatttcatt 4680875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 11650113 - 11649986
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11650113 ttatttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 11650014  T
Q  394 taaaaaatgcatcgcaccaatttcattc 421  Q
    ||||||||||||| ||||||||||||||    
T  11650013 taaaaaatgcatcacaccaatttcattc 11649986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 23591519 - 23591391
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23591519 ttatttattaattttgttagatctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 23591420  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| |||||||||||||||||||||||||    
T  23591419 taaaaaaatgcatcgcaccaatttcattc 23591391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 288 - 421
Target Start/End: Complemental strand, 12140972 - 12140838
Alignment:
Q  288 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 387  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  12140972 acatccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcgttattaggtttgcaattatttaacctaacaaat 12140873  T
Q  388 tccatctaaaa-aatgcatcgcaccaatttcattc 421  Q
    | ||||||||| |||||||||||||||||||||||    
T  12140872 ttcatctaaaagaatgcatcgcaccaatttcattc 12140838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 293 - 421
Target Start/End: Original strand, 16671604 - 16671733
Alignment:
Q  293 tttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    ||||||| || |||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16671604 tttatttttttattttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccat 16671703  T
Q  393 ct-aaaaaatgcatcgcaccaatttcattc 421  Q
    || |||||||||||||||||||||||||||    
T  16671704 ctaaaaaaatgcatcgcaccaatttcattc 16671733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 293 - 421
Target Start/End: Original strand, 17645972 - 17646101
Alignment:
Q  293 tttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    ||||||| || |||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17645972 tttatttttttattttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccat 17646071  T
Q  393 ct-aaaaaatgcatcgcaccaatttcattc 421  Q
    || |||||||||||||||||||||||||||    
T  17646072 ctaaaaaaatgcatcgcaccaatttcattc 17646101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 296 - 423
Target Start/End: Complemental strand, 11646312 - 11646185
Alignment:
Q  296 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 395  Q
    |||||||||||||||||  |||||||||| ||||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  11646312 atttattaattttgttatgtctgcagcaacttaacctaatttttttccactcatttgctttgttaggtttgcaattatttaacctaacaaattccgtcta 11646213  T
Q  396 aaaaatgcatcgcaccaatttcattcat 423  Q
    ||||||||||||||||||||||||||||    
T  11646212 aaaaatgcatcgcaccaatttcattcat 11646185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 9142066 - 9141937
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  9142066 ttatttattaattttgttatgtctgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 9141967  T
Q  394 taa--aaaatgcatcgcaccaatttcattc 421  Q
    |||  ||||||||| |||||||||||||||    
T  9141966 taaaaaaaatgcattgcaccaatttcattc 9141937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 22774015 - 22773890
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  22774015 ttatttattaattttgttacgtctgcaacaatttaacctaattttt-cccgctcatttgctttactatgtttgcaattatttaatctaacaaatttcatc 22773917  T
Q  394 taaaaaatgcatcgcaccaatttcatt 420  Q
    ||||||| |||||||||||||||||||    
T  22773916 taaaaaacgcatcgcaccaatttcatt 22773890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 48640906 - 48640777
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||||||||||| |  ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  48640906 ttatttattaattttgtaaggtctgcagcaatttaacctaatttcttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 48640807  T
Q  394 taa--aaaatgcatcgcaccaatttcattc 421  Q
    |||  |||||||||||||||||||||||||    
T  48640806 taaaaaaaatgcatcgcaccaatttcattc 48640777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 2527059 - 2526931
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||| |||    
T  2527059 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttcccgctcatttgctttattaggtttgcaattatttaacctaactaattacat 2526960  T
Q  393 ctaa-aaaatgcatcgcaccaatttcatt 420  Q
    |||| ||||||||||||||||||||||||    
T  2526959 ctaaaaaaatgcatcgcaccaatttcatt 2526931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 11646502 - 11646374
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  11646502 ttatttattaattttgttacgtctgcagcaacttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccata 11646403  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | ||||||||||| |||||||||||||||    
T  11646402 taaaaaaatgcatagcaccaatttcattc 11646374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 18486634 - 18486762
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  18486634 ttatttattaattttgttaggtttgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 18486733  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | ||||||||||||  |||||||||||||    
T  18486734 taaaaaaatgcatcataccaatttcattc 18486762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 16492649 - 16492520
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16492649 ttatttattaattttgttaggtctgcagcaatttaacttatttttttcc-gctcatttgctttattatgtttgcaattatttaacctaacaaatttcatc 16492551  T
Q  394 taaaaaa-tgcatcgcaccaatttcattcat 423  Q
    ||||||| |||||||||| ||||||||||||    
T  16492550 taaaaaagtgcatcgcactaatttcattcat 16492520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 290 - 421
Target Start/End: Original strand, 22324280 - 22324412
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||| ||| ||||| ||||||| |||||||||||||     
T  22324280 atctttatttattaattttgttaggtctgcagcaatttaacctaattgtttcccgctcatttacttttttaggtttgtaattattcaacctaacaaattt 22324379  T
Q  390 catct-aaaaaatgcatcgcaccaatttcattc 421  Q
    ||||| |||||||||||||||||||||||||||    
T  22324380 catctaaaaaaatgcatcgcaccaatttcattc 22324412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 27716636 - 27716508
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  | | |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  27716636 ttatttattaattttgttaggttttcagcaatttaacctaattttatcccgctcatttgctttattaggtttgcaattatttaacctaacaacttccatc 27716537  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| |||||||||||||||||||| ||||    
T  27716536 taaaaaaatgcatcgcaccaatttgattc 27716508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 45419741 - 45419614
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  45419741 ttatttattaattttgttaggtctgcagtaatttaacctaatttttttaagctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 45419642  T
Q  394 taaaaa-atgcatcgcaccaatttcatt 420  Q
    |||||| |||||||||||||||||||||    
T  45419641 taaaaagatgcatcgcaccaatttcatt 45419614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 48641121 - 48640991
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||| ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||| || ||||| ||||    
T  48641121 ttatttattaattttgttaggtctgtagcaatttaacatagttttttcccgctcatttgctttattaggtttgcaattatttaaccaaaaaaatttcatc 48641022  T
Q  394 taa-aaaatgcatcgcaccaatttcattcat 423  Q
    ||| |||||||||||||||||||||||||||    
T  48641021 taaaaaaatgcatcgcaccaatttcattcat 48640991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 294 - 419
Target Start/End: Original strand, 34837187 - 34837315
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||  ||||| ||||||||||||| |||| ||||||||||||||||||||||||||    
T  34837187 ttatttattaattttgttaggtctgcagcaatttaacctaattttttttccgcttatttgctttattaggtttacaattatttaacctaacaaattccat 34837286  T
Q  393 ct--aaaaaatgcatcgcaccaatttcat 419  Q
    ||  |||||||||||||||||||||||||    
T  34837287 ctaaaaaaaatgcatcgcaccaatttcat 34837315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 19222105 - 19222233
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||  ||| ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  19222105 ttatttattaattttgttagttctgcagcaatttaacctaattttttttccgttcatttgctttattaggtttacaattatttaacctaacaaattccat 19222204  T
Q  393 ctaaaaa-atgcatcgcaccaatttcatt 420  Q
    ||||||| ||||||| |||||||||||||    
T  19222205 ctaaaaatatgcatcacaccaatttcatt 19222233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 317 - 421
Target Start/End: Complemental strand, 4681227 - 4681121
Alignment:
Q  317 tgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa--aaaatgcatcgcaccaat 414  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||||||    
T  4681227 tgcaacaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaataaattccatctaaaaaaaatacatcgcaccaat 4681128  T
Q  415 ttcattc 421  Q
    |||||||    
T  4681127 ttcattc 4681121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 27716414 - 27716308
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||  |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27716414 ttatttattaattttgttaggtctctagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattccatc 27716315  T
Q  394 taaaaaa 400  Q
    |||||||    
T  27716314 taaaaaa 27716308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 21224138 - 21224266
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||||||||| |||| ||||||||||||||||||| || ||||    
T  21224138 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacctaacaagtttcatc 21224237  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | ||||||| ||||||| |||||||||||    
T  21224238 taaaaaaatacatcgcatcaatttcattc 21224266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 23591736 - 23591608
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||| ||  | |||| ||||| || |||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23591736 ttatttattaattttgctaagtgtgcaacaattgaagctaattttttccctttcatttgctttattaggtttgcaattatttaacctaacaaattccatc 23591637  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||||||||||||||||||    
T  23591636 tgaaaaaatgcatcgcaccaatttcattc 23591608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 323 - 421
Target Start/End: Original strand, 18487180 - 18487279
Alignment:
Q  323 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||    
T  18487180 aatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcacaccaatttcattc 18487279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 287 - 421
Target Start/End: Complemental strand, 40450213 - 40450078
Alignment:
Q  287 aacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 386  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||||||| |||  |||||||||||||||||  ||||||||||||||||||||||||    
T  40450213 aacatccttatttattaattttgttaggtctgcagcaatttaacctaatttattcgtgctcatttgctttattagatttgcaattatttaacctaacaaa 40450114  T
Q  387 ttccatctaaaaa-atgcatcgcaccaatttcattc 421  Q
    || | |||||||| |||||||||| |||| ||||||    
T  40450113 tttcttctaaaaatatgcatcgcaacaatatcattc 40450078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 295 - 420
Target Start/End: Complemental strand, 45419947 - 45419820
Alignment:
Q  295 tatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||||||||||||  |||||| |||| ||||||| ||||||  ||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  45419947 tatttattaattttgttaggtctgcatcaatctaacctatttttttttccgctcatttgctttattaggtttgtaattatttaacctaacaaattccatc 45419848  T
Q  394 taa-aaaatgcatcgcaccaatttcatt 420  Q
    ||| ||||||||||||||||||||||||    
T  45419847 taaaaaaatgcatcgcaccaatttcatt 45419820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 2354770 - 2354641
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||||||||||||| |||| |||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  2354770 ttatttattaattttgttaggtctgcagcaatttaacgtaatgttttccagctcatttgctttattaggtttgcaattatttaatataacaaattccatc 2354671  T
Q  394 taa--aaaatgcatcgcaccaatttcattc 421  Q
    |||  ||||||||| |||||||||| ||||    
T  2354670 taaaaaaaatgcattgcaccaattttattc 2354641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 11646036 - 11645930
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||     
T  11646036 ttatttattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaatttcata 11645937  T
Q  394 taaaaaa 400  Q
    |||||||    
T  11645936 taaaaaa 11645930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 289 - 421
Target Start/End: Original strand, 35124720 - 35124853
Alignment:
Q  289 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 388  Q
    |||| |||||||||||| ||||||  | |||| ||||||||| |||||||||  || ||||||||||||||| |||||||||||||||||||||||||||    
T  35124720 catccttatttattaatgttgttaggtttgcaacaatttaacttaattttttgtcgttcatttgctttattaggtttgcaattatttaacctaacaaatt 35124819  T
Q  389 ccatct-aaaaaatgcatcgcaccaatttcattc 421  Q
    || ||| |||||||||||||||||||||||||||    
T  35124820 ccgtctaaaaaaatgcatcgcaccaatttcattc 35124853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 294 - 410
Target Start/End: Complemental strand, 46264389 - 46264272
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||||||||||||||||| |||||| ||| | ||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| ||    
T  46264389 ttatttattaattttgttacgtctgcaacaactcaacctaatttttttccccctcatttgctttattaggtttgcaattatttaacctaacaaattctat 46264290  T
Q  393 ctaaaaaatgcatcgcac 410  Q
    ||||||||||||| ||||    
T  46264289 ctaaaaaatgcattgcac 46264272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 294 - 411
Target Start/End: Original strand, 30991459 - 30991578
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||||| ||||||| ||| | |||| ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30991459 ttatttatcaattttgatacgtttgcaacaatttaacttaattttttttccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 30991558  T
Q  393 ct-aaaaaatgcatcgcacc 411  Q
    || |||||||||||||||||    
T  30991559 ctaaaaaaatgcatcgcacc 30991578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 4681699 - 4681573
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||||||||||||| |||||||| |||| |   ||||||||||| ||||||||||||||||| ||||||||| ||||    
T  4681699 ttatttattaattttgttacgtctgcagcaatttaacttaattttt-cccgtt---ttgctttattaggtttgcaattatttaacttaacaaatttcatc 4681604  T
Q  394 taa-aaaatgcatcgcaccaatttcattcat 423  Q
    ||| ||||||||||||| |||||||||||||    
T  4681603 taaaaaaatgcatcgcatcaatttcattcat 4681573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 48641546 - 48641417
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||||||||| |||| ||||||| || |||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  48641546 ttatttattaattttcttacgtctgcaggaacttaacctaattttt-cctgctcatttgctttattaagtttgcaattatttaacctaacaaatttcatc 48641448  T
Q  394 taa---aaaatgcatcgcaccaatttcattc 421  Q
    |||   ||||| ||||||| |||||||||||    
T  48641447 taaaaaaaaattcatcgcatcaatttcattc 48641417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 16671246 - 16671375
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaa-tttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||||||||||||||||  |||||||||| ||||||| ||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||| |||    
T  16671246 ttatttattaattttgttaggtctgcagcaattttaaccaaatatttt-ccgctcatttgctctattaggtttgcaattatttaacctaacaaatttcat 16671344  T
Q  393 ct--aaaaaatgcatcgcaccaatttcattc 421  Q
    ||  |||||||||||||||||| ||||||||    
T  16671345 ctaaaaaaaatgcatcgcaccagtttcattc 16671375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 17645614 - 17645743
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaa-tttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||||||||||||||||  |||||||||| ||||||| ||| |||| ||||||||||||| ||||| ||||||||||||||||||||||||||| |||    
T  17645614 ttatttattaattttgttaggtctgcagcaattttaaccaaatatttt-ccgctcatttgctctattaggtttgcaattatttaacctaacaaatttcat 17645712  T
Q  393 ct--aaaaaatgcatcgcaccaatttcattc 421  Q
    ||  |||||||||||||||||| ||||||||    
T  17645713 ctaaaaaaaatgcatcgcaccagtttcattc 17645743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 286 - 377
Target Start/End: Complemental strand, 32278249 - 32278158
Alignment:
Q  286 taacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaa 377  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  32278249 taacatccttatttattaattatgttacgtctgcagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaa 32278158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 34837442 - 34837568
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||| |||||||||  ||| |||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||| |||||||||||| ||||    
T  34837442 ttatttatttattttgttaggtcttcagcaatttaacataattttttcc-gctcatttactttattaggtttgcaattattttacctaacaaatttcatc 34837540  T
Q  394 t-aaaaaatgcatcgcaccaatttcatt 420  Q
    | |||||||||||||||| |||||||||    
T  34837541 taaaaaaatgcatcgcacaaatttcatt 34837568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 297 - 420
Target Start/End: Complemental strand, 2853320 - 2853195
Alignment:
Q  297 tttattaattttgttacctctgcagcaatttaacctaattttttccc-gctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 395  Q
    ||||||||||||||||| | || | |||||||||||||||||||  | | ||||||| ||||||| ||||||||||||||||||||||||||| ||||||    
T  2853320 tttattaattttgttacatttgtatcaatttaacctaattttttttcagttcatttgttttattaggtttgcaattatttaacctaacaaatttcatcta 2853221  T
Q  396 a-aaaatgcatcgcaccaatttcatt 420  Q
    | ||||||||||||||||||||||||    
T  2853220 aaaaaatgcatcgcaccaatttcatt 2853195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 288 - 384
Target Start/End: Complemental strand, 9142244 - 9142148
Alignment:
Q  288 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaaca 384  Q
    ||||| |||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  9142244 acatccttatttattaattttgttaggtctgcaataatttaacctaattttttcccgctcatttgctttatttggtttgcaattatttaacctaaca 9142148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 11646627 - 11646705
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatta 372  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  11646627 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaatta 11646705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 21128040 - 21128146
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||||||| ||||||||||| |||| ||||| ||||||||||||| |||| || ||||||||||||||||||||| ||    
T  21128040 ttatttattaattttgttaggtctgcagcagtttaacctaatctttttccgctgatttgctttattacgtttccatttatttaacctaacaaattccttc 21128139  T
Q  394 taaaaaa 400  Q
     ||||||    
T  21128140 aaaaaaa 21128146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 326 - 410
Target Start/End: Original strand, 43059223 - 43059308
Alignment:
Q  326 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaa-aatgcatcgcac 410  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| ||||    
T  43059223 ttaacctaattttttctcgctcatttgctttattaggtttgcaattatttaatctaacaaattccatctaaaagaatgcattgcac 43059308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 315 - 423
Target Start/End: Complemental strand, 1566593 - 1566482
Alignment:
Q  315 tctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa--aaaatgcatcgcacc 411  Q
    |||||| |||||||||||||||||||   ||| |||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||| || |||||    
T  1566593 tctgcaacaatttaacctaatttttttttcgcacatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaagaaaatgaattgcacc 1566494  T
Q  412 aatttcattcat 423  Q
    ||||||||||||    
T  1566493 aatttcattcat 1566482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 4454924 - 4455052
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||||||||| |||  |||||| ||| |||||||||| ||||||| |  ||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  4454924 ttatttattaattttattaggtctgcaacaacttaacctaatattttccctccaatttgctgtattaggttagcagtaatttaacctaacaaattccatc 4455023  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | ||||||||||||||| |||||||||||    
T  4455024 taaaaaaatgcatcgcatcaatttcattc 4455052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 317 - 421
Target Start/End: Complemental strand, 16362772 - 16362667
Alignment:
Q  317 tgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatt 415  Q
    ||||||||| ||| |||||||||| ||||||||||| |||||||  |||||| ||||||||||||||||||| |||| || ||||||||||||||||||     
T  16362772 tgcagcaatgtaatctaatttttttccgctcatttgttttattagatttgcagttatttaacctaacaaatttcatcaaataaaatgcatcgcaccaata 16362673  T
Q  416 tcattc 421  Q
    ||||||    
T  16362672 tcattc 16362667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 40686967 - 40686892
Alignment:
Q  323 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaa 399  Q
    ||||||| |||||||||||  | | ||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  40686967 aatttaagctaattttttca-gtttatttgctttattaggtttgcaattatttaacctaacaaattacatctaaaaa 40686892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 23591304 - 23591237
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattat 361  Q
    |||||||| ||||||||||  ||| |  ||||||||||||||||||||||||||||||||||||||||    
T  23591304 ttatttataaattttgttaggtctactacaatttaacctaattttttcccgctcatttgctttattat 23591237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 34837388 - 34837441
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctc 347  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||| |||||    
T  34837388 ttatttattaattttgttaggtctgcaacaatttaacctaattttttctcgctc 34837441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 9395804 - 9395855
Alignment:
Q  371 tatttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcattc 421  Q
    ||||||||||||||| || ||||||||| |||||||||||||||||| ||||    
T  9395804 tatttaacctaacaattttcatctaaaacaatgcatcgcaccaattttattc 9395855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 340
Target Start/End: Original strand, 34837655 - 34837701
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 340  Q
    |||||||||| ||||||||  | ||||||||||||||||||||||||    
T  34837655 ttatttattagttttgttaggtatgcagcaatttaacctaatttttt 34837701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 6249840 - 6249897
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcattt 351  Q
    |||||||||||||||||||  ||||||||  ||||||||||| |||| || |||||||    
T  6249840 ttatttattaattttgttaggtctgcagcgttttaacctaatatttttcctctcattt 6249897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 421
Target Start/End: Original strand, 6249896 - 6249945
Alignment:
Q  373 tttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcattc 421  Q
    |||||||||||||| |||| | |||| |||||||||||||||||||||||    
T  6249896 tttaacctaacaaactccaacgaaaaaaatgcatcgcaccaatttcattc 6249945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 46264135 - 46264086
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 343  Q
    |||||||||||||||||||  |||| ||||| | ||||||||||||||||    
T  46264135 ttatttattaattttgttaaatctgtagcaactcaacctaattttttccc 46264086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 423
Target Start/End: Original strand, 4455240 - 4455268
Alignment:
Q  395 aaaaaatgcatcgcaccaatttcattcat 423  Q
    |||||||||||||||||||||||||||||    
T  4455240 aaaaaatgcatcgcaccaatttcattcat 4455268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 5194286 - 5194326
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||| ||||||||| |||| ||||||||||||||||    
T  5194286 tgtacaatgaggtgtatgaataaatggtgttcatgtaacat 5194326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 5810979 - 5811019
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||||||||||| || ||||||||| |||||||||||    
T  5810979 tgtacaatggggtgtaggaataaagggtggtcatgtaacat 5811019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 24001067 - 24001107
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  24001067 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 24001107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 26898457 - 26898497
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  26898457 tgtacaattgggtgtatgaataaaaggtgttcatgtaacat 26898497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 27535286 - 27535326
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  27535286 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 27535326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 31408688 - 31408728
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  31408688 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 31408728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 40236964 - 40236924
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| || ||||||| |||||||||||||||||||||    
T  40236964 tgtacaataggatgtatgattaaagggtgttcatgtaacat 40236924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 41861719 - 41861679
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||| ||| |||||||||| |||||||||||||||||||||    
T  41861719 tgtataattgggtgtatgaataaagggtgttcatgtaacat 41861679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 42538486 - 42538526
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  42538486 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 42538526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 43317488 - 43317448
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||| ||||||||| |||| ||||||||||||||||    
T  43317488 tgtacaatgaggtgtatgaataaatggtgttcatgtaacat 43317448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 44326223 - 44326183
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  44326223 tgtacaatgggatgtatgaataaagggtgtttatgtaacat 44326183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 4e-57; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 290 - 421
Target Start/End: Original strand, 9828915 - 9829047
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9828915 atctttattaattaattttgttacctctgcagcaatttaacttaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattc 9829014  T
Q  390 catct-aaaaaatgcatcgcaccaatttcattc 421  Q
    ||||| |||||||||||||||||||||||||||    
T  9829015 catctaaaaaaatgcatcgcaccaatttcattc 9829047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 25068188 - 25068317
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 392  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  25068188 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaaattccat 25068287  T
Q  393 ct-aaaaaatgcatcgcaccaatttcattc 421  Q
    || |||||||||||||||||||||||||||    
T  25068288 ctaaaaaaatgcatcgcaccaatttcattc 25068317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 4811168 - 4811037
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||    
T  4811168 ttatttatttattttgttacgtctgcagcaatttaacctaattttttcccgctcgtttgctttattaggtttgcaattatttaacctaactaattccatc 4811069  T
Q  394 taa--aaaatgcatcgcaccaatttcattcat 423  Q
    |||  |||||| ||||||||||||||||||||    
T  4811068 taaaaaaaatgaatcgcaccaatttcattcat 4811037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 17202850 - 17202980
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  17202850 ttatttataaattttgttaggtctgcagcaatttaacctaattttttcccgcccatttgctttattagatttgcaattatttaacctaacaaattccatc 17202949  T
Q  394 t-aaaaaatgcatcgcaccaatttcattcat 423  Q
    | ||||||||||||||| |||||||||||||    
T  17202950 taaaaaaatgcatcgcatcaatttcattcat 17202980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 294 - 416
Target Start/End: Complemental strand, 17906906 - 17906784
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  17906906 ttatttattaattttgttaggtttgcagcaatttaacctaattttttccagctcatttgctttattaggtttgtaattatttaacctaacaaattccatc 17906807  T
Q  394 taaaaaatgcatcgcaccaattt 416  Q
    ||||||||| |||||||||||||    
T  17906806 taaaaaatgtatcgcaccaattt 17906784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 25067962 - 25068090
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| ||||||||| ||||    
T  25067962 ttatttgttaattttgttacatctgcagcaatttaacctaatttttttccgctcatttgctttataaggtttgcaattatttaacataacaaattacatc 25068061  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||||||||||||||||||    
T  25068062 taaaaaaatgcatcgcaccaatttcattc 25068090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 17201597 - 17201724
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||| ||||||||||||| ||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  17201597 ttatttattaattttgttacgtctgcaacaatttaacctaacttttttccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatc 17201696  T
Q  394 t-aaaaaatgcatcgcaccaatttcatt 420  Q
    | ||||||||||||||||||||||||||    
T  17201697 taaaaaaatgcatcgcaccaatttcatt 17201724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 23610432 - 23610559
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaa-ttttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||||||||||||||||  |||||| ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  23610432 ttatttattaattttgttaggtctgcaacaatttaacctaatttttttcccgctcatttgctttattaggttt-caattatttaacctaacaaattccat 23610530  T
Q  393 cta-aaaaatgcatcgcaccaatttcatt 420  Q
    ||| |||||||||||||||||||||||||    
T  23610531 ctacaaaaatgcatcgcaccaatttcatt 23610559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 27579598 - 27579725
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||||||||||||   |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||    
T  27579598 ttatttattaattttgttcggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattcaatc 27579697  T
Q  394 t-aaaaaatgcatcgcaccaatttcatt 420  Q
    | |||||||||||| |||||||||||||    
T  27579698 taaaaaaatgcatcacaccaatttcatt 27579725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 4100424 - 4100293
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatt----tgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||    ||||||||||||||||||||||||||| |||||||||||    
T  4100424 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgttcattaatttgctttattatgtttgcaattatttaagctaacaaattc 4100325  T
Q  390 catctaa-aaaatgcatcgcaccaatttcatt 420  Q
    ||||||| ||||||||||||||||||||||||    
T  4100324 catctaaaaaaatgcatcgcaccaatttcatt 4100293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 289 - 427
Target Start/End: Original strand, 808467 - 808605
Alignment:
Q  289 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 388  Q
    |||| |||||||||||||||||||  |||||||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||| || |||||||    
T  808467 catccttatttattaattttgttagttctgcagcaatttaacgtaattttttctcgctcatttgctttattagatttgcaattatttaa-cttacaaatt 808565  T
Q  389 ccatctaaaaaa-tgcatcgcaccaatttcattcatctca 427  Q
    | |||||||||| ||||||||||||||||||||| |||||    
T  808566 ctatctaaaaaattgcatcgcaccaatttcattcctctca 808605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 290 - 420
Target Start/End: Original strand, 27315283 - 27315413
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    ||||||||||||||||||||||   |||||||||| |||||||||||||||||  || ||||||||||||| ||||||||||||||||||||||||||||    
T  27315283 atctttatttattaattttgttcggtctgcagcaacttaacctaattttttcca-ctaatttgctttattaggtttgcaattatttaacctaacaaattc 27315381  T
Q  390 catct-aaaaaatgcatcgcaccaatttcatt 420  Q
     |||| |||||||||||| |||||||||||||    
T  27315382 aatctaaaaaaatgcatcacaccaatttcatt 27315413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 17199986 - 17200115
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||| |||||||||||||||| ||||||| |||||||||| ||||| |||  || | ||||||||||| ||||| ||||    
T  17199986 ttatttattaattttgttaggtctgtagcaatttaacctaatattttccctctcatttgctatattaggttaacagtaatttaacctaataaatttcatc 17200085  T
Q  394 taaaaaatgcatcgcaccaatttcattcat 423  Q
    ||||||||||||||||||||||||||||||    
T  17200086 taaaaaatgcatcgcaccaatttcattcat 17200115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 808829 - 808958
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| |||||||| |||    
T  808829 ttatctattaattttgttaggtctgcagcaatttaacctaatttttttcccactcatttgctttattaggtttgcaattatttaaccaaacaaatttcat 808928  T
Q  393 ctaaa--aaatgcatcgcaccaatttcatt 420  Q
    |||||  ||||||||| ||| |||||||||    
T  808929 ctaaaataaatgcatcacactaatttcatt 808958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 294 - 416
Target Start/End: Original strand, 23622218 - 23622341
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||||  |||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| || |    
T  23622218 ttatttattaattttgttaggtctgcaataatttaacctaactttttcccactcatttgctttattaggtttgcaattatttaacctaacaaatttcagc 23622317  T
Q  394 t-aaaaaatgcatcgcaccaattt 416  Q
    | ||||||||  ||||||||||||    
T  23622318 taaaaaaatgtgtcgcaccaattt 23622341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 32208513 - 32208383
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatta-tttaacctaacaaattccat 392  Q
    |||||||||||||||| ||  |||||| |||||||| |||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  32208513 ttatttattaattttgctaggtctgcaacaatttaatctaattttttcc-gctcatttgctttattaggtttgcaattattttaacctaacaaattccat 32208415  T
Q  393 cta-aaaaatgcatcgcaccaatttcattcat 423  Q
    ||| |||||||||||  || ||||||||||||    
T  32208414 ctagaaaaatgcatcagactaatttcattcat 32208383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 325 - 420
Target Start/End: Original strand, 17202661 - 17202758
Alignment:
Q  325 tttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 420  Q
    |||||||||||||||| | |||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||    
T  17202661 tttaacctaatttttttcacgctcatttgctttattaggtttgcaattatttaatctaacaaattccatctaaaaaaatgtatcgcaccaatttcatt 17202758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 26832622 - 26832494
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc-gctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    ||||||||||| |||||||  | |||| ||||||||||||||||||| || ||| ||||||||||||| ||||||||||||||||| ||||||||| |||    
T  26832622 ttatttattaactttgttagat-tgcaacaatttaacctaatttttttccagcttatttgctttattaggtttgcaattatttaacttaacaaattacat 26832524  T
Q  393 ctaa-aaaatgcatcgcaccaatttcattc 421  Q
    |||| ||||||||| |||||||||||||||    
T  26832523 ctaaaaaaatgcatagcaccaatttcattc 26832494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 15130899 - 15131029
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||||||| ||||| ||| | ||| || |||||| |||||||||  |||||||||||||||||||||||||||| ||    
T  15130899 ttatttattaattttgttacgtctgcagcaacttaacgtaaatattttccactcattcgctttattagatttgcaattatttaacctaacaaattccctc 15130998  T
Q  394 t-aaaaaatgcatcgcac--caatttcattc 421  Q
    | ||||||||||| ||||  |||||||||||    
T  15130999 taaaaaaatgcattgcacatcaatttcattc 15131029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 29201558 - 29201676
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||            |||||||||||||||||||| ||||    
T  29201558 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgcttt------------attatttaacctaacaaatttcatc 29201645  T
Q  394 t-aaaaaatgcatcgcaccaatttcattcat 423  Q
    | |||||||||||| ||||||||||||||||    
T  29201646 taaaaaaatgcatcacaccaatttcattcat 29201676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 17080035 - 17080166
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||||||||| |||  ||||||||||  ||||||||| ||||||  |  ||||||| ||||| ||| ||| | |||||||||||||||||| |||    
T  17080035 ttatttattaattttattatgtctgcagcaacctaacctaatattttccgtccaatttgctgtattaggttagcattaatttaacctaacaaattctatc 17080134  T
Q  394 t--aaaaaatgcatcgcaccaatttcattcat 423  Q
    |  |||||||||||||||||||||||||||||    
T  17080135 tagaaaaaatgcatcgcaccaatttcattcat 17080166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 315 - 420
Target Start/End: Original strand, 23902528 - 23902634
Alignment:
Q  315 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc-taaaaaatgcatcgcaccaa 413  Q
    ||||||||||||||||||||| |||||||| ||||||| | ||||| |||  || | |||||||||||||||||| ||| |||||||||||| |||||||    
T  23902528 tctgcagcaatttaacctaatattttcccgttcatttgttgtattaggttaccagtaatttaacctaacaaattctatcttaaaaaatgcattgcaccaa 23902627  T
Q  414 tttcatt 420  Q
    |||||||    
T  23902628 tttcatt 23902634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 808693 - 808811
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||| |||||||||||||| ||||||||||||||||          |||||||||||||||||||||||||||  |||    
T  808693 ttatttattaattttgttatgtctgctgcaatttaacctaa-tttttcccgctcattt---------agtttgcaattatttaacctaacaaattttatc 808782  T
Q  394 t--aaaaaatgcatcgcaccaatttcatt 420  Q
    |  |||||||||||| ||| |||||||||    
T  808783 taaaaaaaatgcatcccactaatttcatt 808811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 370
Target Start/End: Original strand, 17011130 - 17011185
Alignment:
Q  315 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaat 370  Q
    ||||||||||||||||||||| |||||||||||||||| | ||||||||| |||||    
T  17011130 tctgcagcaatttaacctaatattttcccgctcatttgatgtattatgttagcaat 17011185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 358
Target Start/End: Original strand, 1393582 - 1393644
Alignment:
Q  296 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttat 358  Q
    |||||||||||||||||  ||||||||||||||| ||||||||||  || |||||||||||||    
T  1393582 atttattaattttgttaagtctgcagcaatttaaactaattttttttcggtcatttgctttat 1393644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 340
Target Start/End: Complemental strand, 4125755 - 4125709
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 340  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||    
T  4125755 ttatttattaattttgttaggtctgcagcaatttaacctaatttttt 4125709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 8685155 - 8685236
Alignment:
Q  296 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 382  Q
    |||||||||||||||||  |||||| ||||||||     | |||||||||||||||||| ||||||||| ||||| |||||||||||    
T  8685155 atttattaattttgttaggtctgcaacaatttaa-----tattttcccgctcatttgctgtattatgttagcaataatttaacctaa 8685236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 382
Target Start/End: Original strand, 8674476 - 8674557
Alignment:
Q  296 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 382  Q
    |||||||||||||||||  |||||| ||||||||     | |||||||||| ||||||| ||||||||| ||||| |||||||||||    
T  8674476 atttattaattttgttaggtctgcaacaatttaa-----tattttcccgcttatttgctgtattatgttagcaataatttaacctaa 8674557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 32208634 - 32208573
Alignment:
Q  337 ttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaa 398  Q
    |||| ||||| |||||||| ||||  ||| |||||||||||| |||||||||||||||||||    
T  32208634 tttttccgctgatttgcttgattagatttccaattatttaacttaacaaattccatctaaaa 32208573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 17011026 - 17011074
Alignment:
Q  295 tatttattaattttgttacctctgcagcaatttaacctaattttttccc 343  Q
    ||||||||||||||||||  |||||||||| |||||||||||| |||||    
T  17011026 tatttattaattttgttaagtctgcagcaacttaacctaatttcttccc 17011074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 27441587 - 27441547
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  27441587 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 27441547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 19121169 - 19121216
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttc 341  Q
    |||||||||||||||||||  ||||||||||||||| ||||| |||||    
T  19121169 ttatttattaattttgttagatctgcagcaatttaatctaatattttc 19121216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 340
Target Start/End: Original strand, 17010917 - 17010963
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 340  Q
    |||||||||||||||||||  ||||||||||||||| | ||||||||    
T  17010917 ttatttattaattttgttaagtctgcagcaatttaatcaaatttttt 17010963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 340
Target Start/End: Complemental strand, 33482488 - 33482438
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaatttttt 340  Q
    ||||||||||||||||||| |||| ||||||| || |||||||||| ||||    
T  33482488 atctttatttattaattttattacgtctgcagtaacttaacctaatatttt 33482438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 9698388 - 9698428
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  9698388 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 9698428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 25068140 - 25068184
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaatttt 338  Q
    |||||||||||||||||||| | |||||| ||||||| |||||||    
T  25068140 ttatttattaattttgttacgtgtgcagctatttaacataatttt 25068184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 26466844 - 26466804
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||||||||||| || ||||||||||| |||||||||    
T  26466844 tgtacaatggggtgtaggaataaagggtgtttatgtaacat 26466804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 26670064 - 26670104
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  26670064 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 26670104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 31109277 - 31109317
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||| |||||| ||||||| |||||||||||||||||||||    
T  31109277 tgtataatgggatgtatgattaaagggtgttcatgtaacat 31109317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 1e-54; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 48076190 - 48076318
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  48076190 ttatttattaattttgttacgtctgcagcaatttaatctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 48076289  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||||||||||||||||||    
T  48076290 taaaaaaatgcatcgcaccaatttcattc 48076318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 23952610 - 23952483
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||     
T  23952610 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcacgctcatttgctttattaggtttgcaattatttaacctaaaaaattccatt 23952511  T
Q  394 taaaaaatgcatcgcaccaatttcattc 421  Q
    ||||||||||||||||||||||||||||    
T  23952510 taaaaaatgcatcgcaccaatttcattc 23952483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 36639172 - 36639302
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  36639172 ttatttattaattttgttacgtttgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 36639271  T
Q  394 t-aaaaaatgcatcgcaccaatttcattcat 423  Q
    | |||||||||||||||||||||||||||||    
T  36639272 taaaaaaatgcatcgcaccaatttcattcat 36639302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 297 - 421
Target Start/End: Original strand, 48076371 - 48076496
Alignment:
Q  297 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-a 395  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |    
T  48076371 tttattaattttgttacgtctgcagcaatttaacctaatttttccccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaa 48076470  T
Q  396 aaaaatgcatcgcaccaatttcattc 421  Q
    ||||||||||||||||||||||||||    
T  48076471 aaaaatgcatcgcaccaatttcattc 48076496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 290 - 420
Target Start/End: Original strand, 4941674 - 4941805
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    |||||||||||||||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  4941674 atctttatttattaattttgttacatctacaataatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattt 4941773  T
Q  390 catct-aaaaaatgcatcgcaccaatttcatt 420  Q
    ||||| ||||||||||||||||||||||||||    
T  4941774 catctaaaaaaatgcatcgcaccaatttcatt 4941805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 23952886 - 23952758
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  23952886 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacttaacaaattccatc 23952787  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| |||||||||||| ||||||||||||    
T  23952786 taaaaaaatgcatcgcgccaatttcattc 23952758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 54653755 - 54653627
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||    
T  54653755 ttatttattaattttgttacgtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcagttatttaacctaacaaattcaatc 54653656  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||| ||||||||||||||    
T  54653655 taaaaaaatgcatcacaccaatttcattc 54653627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 290 - 423
Target Start/End: Original strand, 2177260 - 2177394
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    ||||||||||||||||| |||||  |||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||     
T  2177260 atctttatttattaattctgttagatctgcagcaatttaatttaattttttcccgctcatttgctttattaggtttgcaattacttaacctaacaaattt 2177359  T
Q  390 catctaaaaa-atgcatcgcaccaatttcattcat 423  Q
    |||||||||| ||||||||||||||||||||||||    
T  2177360 catctaaaaacatgcatcgcaccaatttcattcat 2177394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 47768952 - 47769081
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| ||||    
T  47768952 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcttcattaggtttgcaattatttaacctaacaaatttcatc 47769051  T
Q  394 t--aaaaaatgcatcgcaccaatttcattc 421  Q
    |  |||||||||||| ||||||||||||||    
T  47769052 ttaaaaaaatgcatcacaccaatttcattc 47769081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 287 - 421
Target Start/End: Complemental strand, 2481761 - 2481629
Alignment:
Q  287 aacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 386  Q
    ||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||    
T  2481761 aacatctttatctattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgca---atttaacctaacaaa 2481665  T
Q  387 ttccatct-aaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||| |||||||||||||||||||||||||||    
T  2481664 ttccatctaaaaaaatgcatcgcaccaatttcattc 2481629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 22292898 - 22293025
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||     
T  22292898 ttatttattaattttgctaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattcaata 22292997  T
Q  394 taaaaaatgcatcgcaccaatttcattc 421  Q
     |||||||||||||||||||||| ||||    
T  22292998 aaaaaaatgcatcgcaccaattttattc 22293025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 53144951 - 53144824
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  53144951 ttatttattaattttgttagatctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaatttcatc 53144852  T
Q  394 taaaaa-atgcatcgcaccaatttcatt 420  Q
    |||||| |||||| | ||||||||||||    
T  53144851 taaaaatatgcattgtaccaatttcatt 53144824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 7821303 - 7821431
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||| ||||||||||    
T  7821303 ttatttattaattttgttaggtatgcagcaatttaacctaattttttcccgcccatttgctttattaatgttgcaattatttaacctaataaattccatc 7821402  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||||||||||||||||||    
T  7821403 taaaaaaatgcatcgcaccaatttcattc 7821431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 28379867 - 28379740
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  28379867 ttatttattaattttgttaggtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaac-aattccatc 28379769  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | ||||||||||||||||||| |||||||    
T  28379768 taaaaaaatgcatcgcaccaagttcattc 28379740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 290 - 421
Target Start/End: Complemental strand, 52689728 - 52689596
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    ||||||||||||||||||| |||  ||||||  |||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||     
T  52689728 atctttatttattaattttattaggtctgcattaatttatcctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaattt 52689629  T
Q  390 catctaa-aaaatgcatcgcaccaatttcattc 421  Q
    ||||||| |||||||||||||||||||||||||    
T  52689628 catctaaaaaaatgcatcgcaccaatttcattc 52689596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 21585662 - 21585535
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||| || |||||||||||||||| ||||||||||||||||| ||||||||| ||||    
T  21585662 ttatttattaattttgttacgtctgcaacaatttaacttaatttttttcctctcatttgctttattaggtttgcaattatttaacttaacaaatttcatc 21585563  T
Q  394 taaaaaatgcatcgcaccaatttcattc 421  Q
    ||||||||| |||| |||||||||||||    
T  21585562 taaaaaatgtatcgtaccaatttcattc 21585535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 24049565 - 24049692
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  | |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||    
T  24049565 ttatttattaattttgttaggtgtgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacgaatttcatc 24049664  T
Q  394 t-aaaaaatgcatcgcaccaatttcatt 420  Q
    | |||||||||||| |||||||||||||    
T  24049665 taaaaaaatgcatcacaccaatttcatt 24049692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 43161846 - 43161719
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  43161846 ttatttattaatcttgttacgtctgcaacaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacctaacaaatttcatc 43161747  T
Q  394 taa-aaaatgcatcgcaccaatttcatt 420  Q
    ||| ||||| ||||||||||||| ||||    
T  43161746 taaaaaaatacatcgcaccaattccatt 43161719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 7796785 - 7796913
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||| |||     
T  7796785 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggattgtaattatttaacctaacaaatttcatt 7796884  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||||||||||| ||||||    
T  7796885 taaaaaaatgcatcgcaccaatctcattc 7796913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 294 - 411
Target Start/End: Original strand, 48076545 - 48076664
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||||    
T  48076545 ttatttattaattttgttacgtttgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacctaacaaattccatc 48076644  T
Q  394 t--aaaaaatgcatcgcacc 411  Q
    |  |||||||||||||||||    
T  48076645 taaaaaaaatgcatcgcacc 48076664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 297 - 396
Target Start/End: Original strand, 44500675 - 44500774
Alignment:
Q  297 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa 396  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  44500675 tttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacgtaacaaattccatctaa 44500774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 12796226 - 12796096
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||||||||| |||  | || ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |||||||||||||||    
T  12796226 ttatttattaattttattaggtatgtagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaatctaacaaattccatc 12796127  T
Q  394 taaaaa-atgcatcgcaccaatttcattcat 423  Q
    |||||| |||||||||||||| |||||||||    
T  12796126 taaaaatatgcatcgcaccaacttcattcat 12796096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 7821519 - 7821647
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||  ||||| ||||    
T  7821519 ttatttattaattttgttaggtctggagcaatttaacctaattttttactgctcatttgctttattaggtttgtaattatttaacctacaaaatttcatc 7821618  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||||||||||||||||||    
T  7821619 taaaaaaatgcatcgcaccaatttcattc 7821647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 29967179 - 29967310
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||| |||||||  ||||||||||| |||||||||||||||||||    
T  29967179 ttatttattaattttgttaggtttgcagcaacttaacctaattttttcccgctcatttgttttattagatttgcaattatataacctaacaaattccatc 29967278  T
Q  394 t--aaaaaatgcatcgcaccaatttcattcat 423  Q
    |  ||||||||||| ||| |||||||||||||    
T  29967279 taaaaaaaatgcattgcatcaatttcattcat 29967310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 305 - 421
Target Start/End: Original strand, 8118608 - 8118725
Alignment:
Q  305 ttttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgc 403  Q
    ||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| ||||| |||||||||    
T  8118608 ttttgttaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagggttgcaattatttaacctaacaaatttcatctaaaaaaatgc 8118707  T
Q  404 atcgcaccaatttcattc 421  Q
     |||||||||||||||||    
T  8118708 ttcgcaccaatttcattc 8118725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 8397848 - 8397720
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| | |||| |||| ||||||| ||||||||||||||||| ||||||||| ||||    
T  8397848 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttctgctcgtttgttttattaggtttgcaattatttaacttaacaaatttcatc 8397749  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| ||||||||| |||||| ||||||||    
T  8397748 taaaaaaatgcattgcaccattttcattc 8397720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 294 - 417
Target Start/End: Original strand, 36639345 - 36639469
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||| ||||||||||||||  | |||||||||||||||||||||||||||| |||||| |||||||| | ||||||||||||||||||||||||| ||||    
T  36639345 ttatatattaattttgttaggtttgcagcaatttaacctaattttttcccgttcattttctttattaggattgcaattatttaacctaacaaatttcatc 36639444  T
Q  394 t-aaaaaatgcatcgcaccaatttc 417  Q
    | |||||||| ||||||||||||||    
T  36639445 taaaaaaatgtatcgcaccaatttc 36639469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 47631360 - 47631488
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  | |||| |||||||||||||||| || | ||| ||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  47631360 ttatttattaattttgttaggtatgcatcaatttaacctaatttatttctgctaatttgctttgttaggtttgcaattatttaacctaacaaatttcatc 47631459  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||||||||||||||||||    
T  47631460 taaaaaaatgcatcgcaccaatttcattc 47631488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 8118383 - 8118510
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||| ||||| |||||| ||||||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  8118383 ttatttattaattt-gttacgtctgcaacaatttaacttaatttttttc-gctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 8118480  T
Q  394 t--aaaaaatgcatcgcaccaatttcattc 421  Q
    |  ||||||||||| |||||||||||||||    
T  8118481 taaaaaaaatgcattgcaccaatttcattc 8118510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 289 - 400
Target Start/End: Complemental strand, 28389882 - 28389771
Alignment:
Q  289 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 388  Q
    |||| |||||||||||||||||||  | ||||| |||| | |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  28389882 catcattatttattaattttgttaggtttgcagtaattcatcctaatattttcccgctcatttgctttattaggtttgcatttatttaacctaacaaatt 28389783  T
Q  389 ccatctaaaaaa 400  Q
    ||||||||||||    
T  28389782 ccatctaaaaaa 28389771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 294 - 419
Target Start/End: Original strand, 7809348 - 7809474
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||| |||||||||||||  | |||| ||||| ||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||| ||||| ||||    
T  7809348 ttattcattaattttgttaggtatgcaacaattgaacctaatttttttctgctcatttgctttattaggtttgtaattatttaacctaaaaaatttcatc 7809447  T
Q  394 t-aaaaaatgcatcgcaccaatttcat 419  Q
    | |||||||||||||||||||||||||    
T  7809448 taaaaaaatgcatcgcaccaatttcat 7809474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 325 - 421
Target Start/End: Complemental strand, 21581351 - 21581253
Alignment:
Q  325 tttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgca-tcgcaccaatttcattc 421  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  21581351 tttaacctaattttttctcgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcattcgcaccaatttcattc 21581253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 304 - 421
Target Start/End: Original strand, 22292701 - 22292819
Alignment:
Q  304 attttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta-aaaaatg 402  Q
    |||||||||  ||||||  |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  22292701 attttgttaggtctgcaataatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaataccatctagaaaaatg 22292800  T
Q  403 catcgcaccaatttcattc 421  Q
    ||| | | |||||||||||    
T  22292801 catggtatcaatttcattc 22292819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 28813225 - 28813355
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  | | || |||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||| |||||||| ||||    
T  28813225 ttatttattaattttgttaggtttacaacaatttaatctaattttttcc-gctcatttgctttattaggtttgtaattatttaaccaaacaaatttcatc 28813323  T
Q  394 t--aaaaaatgcatcgcaccaatttcattcat 423  Q
    |  ||||||||||| |||||||||||||||||    
T  28813324 taaaaaaaatgcattgcaccaatttcattcat 28813355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 28380077 - 28379956
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||| |||||||||||||||||| |  ||||||||| ||||||| |||||||||||||||||||||||||||||       
T  28380077 ttatttattaattttgttaggtctgcaccaatttaacctaattttt-cttgctcatttgttttattaggtttgcaattatttaacctaacaaattcc--- 28379982  T
Q  394 taaaaaatgcatcgcaccaatttcattcat 423  Q
        ||||||||||||||||||||||||||    
T  28379981 ----aaatgcatcgcaccaatttcattcat 28379956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 32010789 - 32010682
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacct-aacaaattccat 392  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||| |||||||||| |||||||| ||||| |||||||| |||| ||||||||||||    
T  32010789 ttatttattaattttgttacgtctgcagtaatttaaactaatttttttccgctcattttctttattaggtttgtaattattttacctaaacaaattccat 32010690  T
Q  393 ctaaaaaa 400  Q
    ||||||||    
T  32010689 ctaaaaaa 32010682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 319 - 423
Target Start/End: Complemental strand, 43162006 - 43161898
Alignment:
Q  319 cagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct----aaaaaatgcatcgcaccaat 414  Q
    |||||||||||| ||| |||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||| |    ||||||||||| ||||||||    
T  43162006 cagcaatttaacttaactttttcacgctcatttgctttattaggtttgcaattatttaacttaacaaattccatttaaaaaaaaaatgcattgcaccaat 43161907  T
Q  415 ttcattcat 423  Q
    |||||||||    
T  43161906 ttcattcat 43161898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 336 - 421
Target Start/End: Complemental strand, 8479206 - 8479122
Alignment:
Q  336 tttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 421  Q
    ||||| |||||||||||||||||||  |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  8479206 ttttttccgctcatttgctttattagatttgcaattatt-aacctaacaaatttcatctaaaaaatgcatcgcaccaatttcattc 8479122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 47631539 - 47631667
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||||||||||| |  |||||| |||||||||||||||| |||  |||| |||||||||||| ||||||||||||||||||||||||||| ||||    
T  47631539 ttatttattaattttgtcaggtctgcatcaatttaacctaatttattct-gctcttttgctttattaggtttgcaattatttaacctaacaaatt-catc 47631636  T
Q  394 ---taaaaaatgcatcgcaccaatttcattc 421  Q
        |||||||||||||| ||||||||||||    
T  47631637 caaaaaaaaatgcatcgccccaatttcattc 47631667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 420
Target Start/End: Complemental strand, 47428513 - 47428394
Alignment:
Q  302 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaa 400  Q
    |||||||||||| | |||||||| |||||||||| ||||||| | |||||| | ||||| ||| ||| | ||||||||||||||||||||||||| ||||    
T  47428513 taattttgttacatatgcagcaacttaacctaatattttccctcccatttgttgtattaggttagcagtaatttaacctaacaaattccatctaaaaaaa 47428414  T
Q  401 tgcatcgcaccaatttcatt 420  Q
    |||||| |||||||||||||    
T  47428413 tgcatctcaccaatttcatt 47428394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 7809561 - 7809655
Alignment:
Q  323 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaattt 416  Q
    |||||||||||||||||| | |||||||||||||||||  |||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  7809561 aatttaacctaatttttttctgctcatttgctttattagatttgtaattatttaacctaaaaaatttcatctaaaaaaatgcatcgcaccaattt 7809655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 289 - 421
Target Start/End: Original strand, 8079013 - 8079146
Alignment:
Q  289 catctttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaat 387  Q
    |||| |||||||||||||||||||  |||| |||||||||| |||||||||| |||||||||||| | ||||| ||| ||| |  |||||||||||||||    
T  8079013 catcattatttattaattttgttagttctggagcaatttaagctaattttttccccgctcatttgttgtattaggttagcagtagtttaacctaacaaat 8079112  T
Q  388 tccatctaaaaa-atgcatcgcaccaatttcattc 421  Q
    |||||||||||| |||||| |||||||||| ||||    
T  8079113 tccatctaaaaagatgcat-gcaccaattttattc 8079146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 326 - 400
Target Start/End: Original strand, 8079327 - 8079401
Alignment:
Q  326 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaa 400  Q
    |||||||||||||||||  ||||||  |||||||| |||||||||||||||||||||||||||||||||||||||    
T  8079327 ttaacctaattttttcctactcattacctttattaggtttgcaattatttaacctaacaaattccatctaaaaaa 8079401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 297 - 365
Target Start/End: Original strand, 15456295 - 15456363
Alignment:
Q  297 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgttt 365  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  15456295 tttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttattaggttt 15456363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 297 - 365
Target Start/End: Original strand, 15463679 - 15463747
Alignment:
Q  297 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgttt 365  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  15463679 tttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttattaggttt 15463747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 24046065 - 24046123
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttg 352  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  24046065 ttatttattaattttgttaggtgtgcagcaatttaacctaattttttcccgctcatttg 24046123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 421
Target Start/End: Original strand, 24049337 - 24049411
Alignment:
Q  348 atttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 421  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||| |||||||||||||||| | ||||||||    
T  24049337 atttgctttattaggtttgcaattatttaacctgacaaatttcatctaaaaaaatgcatcgcactagtttcattc 24049411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 397
Target Start/End: Original strand, 8078897 - 8078997
Alignment:
Q  299 tattaattttgttacctctgcagcaatttaacctaatttttt-cccgctca-tttgctttattatgtttgcaattatttaacctaacaaattccatctaa 396  Q
    ||||||||||||||  |||| |||||||||| |||||||||| |||||||| ||| || ||||||||| ||| |  ||||||||||||||||||||||||    
T  8078897 tattaattttgttaggtctgtagcaatttaagctaattttttccccgctcattttactgtattatgttagcagtagtttaacctaacaaattccatctaa 8078996  T
Q  397 a 397  Q
    |    
T  8078997 a 8078997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 423
Target Start/End: Complemental strand, 7526556 - 7526420
Alignment:
Q  288 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 387  Q
    ||||| || ||||| |||||| |||  |||||||||| ||||||||||  |||||| || |  ||||  | || ||| ||| | ||||||||||||||||    
T  7526556 acatccttgtttatcaattttattaggtctgcagcaacttaacctaataatttccctctaaaatgctgaagtaggttagcagtaatttaacctaacaaat 7526457  T
Q  388 tccatctaaaaa-atgcatcgcaccaatttcattcat 423  Q
    |||||||||||| ||||||| || |||||||||||||    
T  7526456 tccatctaaaaatatgcatcacatcaatttcattcat 7526420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 357 - 421
Target Start/End: Complemental strand, 41852188 - 41852121
Alignment:
Q  357 attatgtttgcaattatttaacctaacaaattccatctaa--aaaatgca-tcgcaccaatttcattc 421  Q
    |||| ||||||||||||||||||||||||||| |||||||  |||||||| |||||||||||||||||    
T  41852188 attaggtttgcaattatttaacctaacaaatttcatctaaaaaaaatgcattcgcaccaatttcattc 41852121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 2526941 - 2526990
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 343  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  2526941 ttatttattaattttggtaggtctgcagcaatttaacctaattttttccc 2526990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 23952658 - 23952613
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttt 339  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||    
T  23952658 ttatttattaattttgttacgtctgcagtaatttaacctaattttt 23952613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 23952706 - 23952661
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttt 339  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||    
T  23952706 ttatttattaattttgttacgtctgcagtaatttaacctaattttt 23952661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 340
Target Start/End: Original strand, 8079456 - 8079502
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 340  Q
    |||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  8079456 ttatttattaattttgttacgtctgcagcagtttaacctaatatttt 8079502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 712005 - 711965
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  712005 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 711965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 1771321 - 1771361
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  1771321 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 1771361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 3756301 - 3756341
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  3756301 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 3756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 28988518 - 28988478
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  28988518 tgtacaatgaggtgtatgaataaagggtgttcatgtaacat 28988478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 18002170 - 18002111
Alignment:
Q  294 ttatttattaattttgttacc---tctgcagcaatttaacctaattttttcccgctcatt 350  Q
    |||||||||||||||||||     |||||| ||| |||||||||||||||||||||||||    
T  18002170 ttatttattaattttgttattaggtctgcaacaagttaacctaattttttcccgctcatt 18002111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 47428347 - 47428298
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 343  Q
    |||||||||||||||||||  ||| || |||||||||||||| |||||||    
T  47428347 ttatttattaattttgttagatctacaacaatttaacctaatattttccc 47428298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 960925 - 960965
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  960925 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 960965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 17619207 - 17619247
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  17619207 tgtacaatagggtgtatgattaaaaggtgttcatgtaacat 17619247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 32728402 - 32728362
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||| ||||||||||||||    
T  32728402 tgtacaatagggtgtatgattaaaggatgttcatgtaacat 32728362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 41878451 - 41878411
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||| ||||||||| ||||| |||||||||||||||    
T  41878451 tgtacaatgaggtgtatgaataaagagtgttcatgtaacat 41878411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 43514741 - 43514781
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  43514741 tgtacaatggagtgtaggaataaagggtgttcatgtaacat 43514781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 46827761 - 46827801
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  46827761 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 46827801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 55966401 - 55966441
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  55966401 tgtacaatgggatgtatgaataaagggtgtttatgtaacat 55966441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 2e-53; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 51113906 - 51114036
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||    
T  51113906 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgttcatttactttattaggtttgcaattatttaacctaacaaattccatc 51114005  T
Q  394 t-aaaaaatgcatcgcaccaatttcattcat 423  Q
    | |||||||||||||||||||||||||||||    
T  51114006 taaaaaaatgcatcgcaccaatttcattcat 51114036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 27296162 - 27296291
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  27296162 ttatttattaattttgttacgtctgcaacaatttaacctaatttttccccgcttatttgctttattaggtttgcaattatttaacctaataaattccatc 27296261  T
Q  394 taaaaaatgcatcgcaccaatttcattcat 423  Q
    ||||||||||||||||||||||||||||||    
T  27296262 taaaaaatgcatcgcaccaatttcattcat 27296291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 318555 - 318683
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  318555 ttatttattaattttgttacgtctgcagcaatttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 318654  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||||||||||||||||||    
T  318655 taaaaaaatgcatcgcaccaatttcattc 318683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 1156171 - 1156043
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1156171 ttatttattaatattgttacggctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 1156072  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| |||||||||||||||||||||||||    
T  1156071 taaaaaaatgcatcgcaccaatttcattc 1156043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 44263089 - 44263217
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44263089 ttatttattaattttgttaagtctgcagcaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacctaacaaattccatc 44263188  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||||||||||||||||||    
T  44263189 taaaaaaatgcatcgcaccaatttcattc 44263217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 5428528 - 5428655
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  5428528 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 5428627  T
Q  394 taaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||||| |||||||||||||||||    
T  5428628 taaaaaatgcttcgcaccaatttcattc 5428655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 42492271 - 42492142
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42492271 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattccatc 42492172  T
Q  394 taa--aaaatgcatcgcaccaatttcattc 421  Q
    |||  |||||||||||||||||||||||||    
T  42492171 taaaaaaaatgcatcgcaccaatttcattc 42492142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 290 - 415
Target Start/End: Original strand, 44262660 - 44262785
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||    
T  44262660 atctttatttattaattttgttaggtctgcagcaatttaacctaatttttttccactcatttgctttattacgtttgcaattatttaacctaacaaattc 44262759  T
Q  390 catctaaaaaatgcatcgcaccaatt 415  Q
    ||||||||||||||| ||||||||||    
T  44262760 catctaaaaaatgcaacgcaccaatt 44262785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 294 - 411
Target Start/End: Original strand, 51114090 - 51114208
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  51114090 ttatttattaattttgttacgtctgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 51114189  T
Q  394 t-aaaaaatgcatcgcacc 411  Q
    | |||||||||||||||||    
T  51114190 taaaaaaatgcatcgcacc 51114208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 38684015 - 38684142
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  38684015 ttatttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcgattatttaacctaacaaattccatc 38684114  T
Q  394 t-aaaaaatgcatcgcaccaatttcatt 420  Q
    | ||||||||||||||||||||||||||    
T  38684115 taaaaaaatgcatcgcaccaatttcatt 38684142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 16165792 - 16165663
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  16165792 ttatttattaattttgttaggtctgtagcaatttaacctaattttttcccgatcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 16165693  T
Q  394 taa--aaaatgcatcgcaccaatttcattc 421  Q
    |||  |||||||||||||||||||||||||    
T  16165692 taaaaaaaatgcatcgcaccaatttcattc 16165663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 51113723 - 51113852
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  51113723 ttatttattaattttgttacgtttgcagcaatttaacctaatttttttccgctcatttgctttattagatttgcaattatttaacctaacaaatttcatc 51113822  T
Q  394 t--aaaaaatgcatcgcaccaatttcattc 421  Q
    |  |||||||||||||||||||||||||||    
T  51113823 taaaaaaaatgcatcgcaccaatttcattc 51113852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 27296337 - 27296465
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  27296337 ttatttattaattttgttacgtctgcaacaatttaacctaattttttctcgctcattttctttattaggtttgcaattatttaacctaacaaatttcatc 27296436  T
Q  394 ta-aaaaatgcatcgcaccaatttcattc 421  Q
    || |||||| |||||||||||||||||||    
T  27296437 tataaaaatacatcgcaccaatttcattc 27296465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 290 - 420
Target Start/End: Original strand, 21617752 - 21617883
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    ||||||||| |||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  21617752 atctttattcattaattttgttaggtctgcattaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattt 21617851  T
Q  390 catct-aaaaaatgcatcgcaccaatttcatt 420  Q
    ||||| |||||||||||||||| |||||||||    
T  21617852 catctaaaaaaatgcatcgcactaatttcatt 21617883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 42497397 - 42497267
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  42497397 ttatttattaattttgataggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 42497298  T
Q  394 t---aaaaaatgcatcgcaccaatttcattc 421  Q
    |   ||||||||||| |||||||||||||||    
T  42497297 tgaaaaaaaatgcattgcaccaatttcattc 42497267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 3227328 - 3227200
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3227328 ttatttattaattttgttagatctgcatcaatttaacctaatttttttc-gctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 3227230  T
Q  394 taa--aaaatgcatcgcaccaatttcattc 421  Q
    |||  ||||||||| |||||||||||||||    
T  3227229 taaaaaaaatgcattgcaccaatttcattc 3227200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 52740700 - 52740829
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  | || ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||| |||    
T  52740700 ttatttattaattttgttaggtttgaagcaatttaacctaattttttcccgctcatttgctttattaggtttacaattatttaacttaacaaattcaatc 52740799  T
Q  394 t--aaaaaatgcatcgcaccaatttcattc 421  Q
    |  |||||||||||||||||||||||||||    
T  52740800 taaaaaaaatgcatcgcaccaatttcattc 52740829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 294 - 398
Target Start/End: Complemental strand, 42497039 - 42496935
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  42497039 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgttttattagatttgcaattatttaacctaacaaattccatc 42496940  T
Q  394 taaaa 398  Q
    |||||    
T  42496939 taaaa 42496935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 1647543 - 1647670
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||||||| |||||||||| ||||| | ||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  1647543 ttatttattaattttgttaggtctgcagcagtttaacctaagttttttctgctcatttgctttattaggtttggaattatttaacctaacaaatttcatc 1647642  T
Q  394 t-aaaaaatgcatcgcaccaatttcatt 420  Q
    | |||||||| |||||||||||||||||    
T  1647643 taaaaaaatgaatcgcaccaatttcatt 1647670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 295 - 421
Target Start/End: Complemental strand, 4100691 - 4100565
Alignment:
Q  295 tatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||||||||||||  ||||||| |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||| |||     
T  4100691 tatttattaattttgttaggtctgcagtaatttaacctaatttttttcccgctcatttgttttattaagtttgcaattatttaacttaacaaatttcata 4100592  T
Q  394 taaaaaatgcatcgcaccaatttcattc 421  Q
    ||||||| ||||||||||||||||||||    
T  4100591 taaaaaa-gcatcgcaccaatttcattc 4100565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 44263310 - 44263437
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||| |||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  44263310 ttatttattaattttgttaggtctgcatcaatataacctaattttttctcgctcatttgccttattaggtttgcaattatttaacctaacaaattacatc 44263409  T
Q  394 -taaaaaatgcatcgcaccaatttcatt 420  Q
      ||||||||||||||| ||||||||||    
T  44263410 gaaaaaaatgcatcgcatcaatttcatt 44263437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 294 - 406
Target Start/End: Original strand, 5428933 - 5429046
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||| |||||||||||||||    
T  5428933 ttatttattaattttgttagatctgcagcaatttaaactaatttttttccgctcatctgctttattaggtttgcaattatttaagctaacaaattccatc 5429032  T
Q  394 taaaa-aatgcatc 406  Q
    ||||| ||||||||    
T  5429033 taaaataatgcatc 5429046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 289 - 421
Target Start/End: Original strand, 5429043 - 5429180
Alignment:
Q  289 catctttatttattaattttgttacctctgcagcaatttaacctaatttttt----cccgctcatttgctttattatgtttgcaattatttaacctaaca 384  Q
    |||| ||||||||||| |||||||  | ||||||||||||||||||||| ||    |||||||| ||||||||||| |||||||||||||||||||||||    
T  5429043 catccttatttattaactttgttaggtgtgcagcaatttaacctaatttattttcccccgctcaattgctttattaggtttgcaattatttaacctaaca 5429142  T
Q  385 aattccatct-aaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  5429143 aattccatctaaaaaaatgcatagcaccaatttcattc 5429180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 298 - 421
Target Start/End: Complemental strand, 6537757 - 6537629
Alignment:
Q  298 ttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaa 397  Q
    |||||||||||||||  || ||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  6537757 ttattaattttgttaggtcagcaacaatttaacttaattttttcccgctcatttactttattaggtttgcaattatttaacctaacaaattccatctaaa 6537658  T
Q  398 aa-----atgcatcgcaccaatttcattc 421  Q
    ||     |||||| |||||||||||||||    
T  6537657 aaaatgcatgcatggcaccaatttcattc 6537629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 296 - 421
Target Start/End: Complemental strand, 28950274 - 28950148
Alignment:
Q  296 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 395  Q
    |||||||||||||||||| || ||| ||||||||| ||||||||| |||| ||||||||||||||  |||| ||||||||||||||||||||| ||||||    
T  28950274 atttattaattttgttacgtccgcaacaatttaacttaatttttttccgcacatttgctttattagatttgaaattatttaacctaacaaatttcatcta 28950175  T
Q  396 a-aaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||| ||||||||||||||    
T  28950174 aaaaaatgcatctcaccaatttcattc 28950148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 18912327 - 18912456
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttg-caattatttaacctaacaaattccat 392  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| |||||  ||||||||||| ||||||||| |||    
T  18912327 ttatttattaattttgttatgtctgcagcaatttaacctaatttttttccgcccatttgctttattaggtttgtaaattatttaacttaacaaatttcat 18912426  T
Q  393 ct-aaaaaatgcatcgcaccaatttcattc 421  Q
    || ||||||||||| ||| |||||||||||    
T  18912427 ctaaaaaaatgcatagcatcaatttcattc 18912456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 294 - 382
Target Start/End: Complemental strand, 28950365 - 28950277
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 382  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  28950365 ttatttattaattttgttacgtctccagcaatttaacctaattttttcccgctaatttgctttattaggtttgcaattatttaacctaa 28950277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 42497574 - 42497448
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||||| |||||||| |||||||||  |||||||||  ||||||| ||||| ||||||||||| ||||||||| |||     
T  42497574 ttatttattaattttgttaggtctgcagtaatttaacttaattttttttcgctcatttattttattaggtttgtaattatttaacttaacaaatttcatt 42497475  T
Q  394 taaaaaatgcatcgcaccaatttcatt 420  Q
    ||||||||| |||||||||||||||||    
T  42497474 taaaaaatgtatcgcaccaatttcatt 42497448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 51272598 - 51272492
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||| || ||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  51272598 ttatttattaattttgttaggtctacaacaatttaacctaatttttttctgctcatttgctttattaggtttgcaattatttaacctaataaattccatc 51272499  T
Q  394 taaaaaa 400  Q
     ||||||    
T  51272498 aaaaaaa 51272492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 296 - 416
Target Start/End: Complemental strand, 28949995 - 28949875
Alignment:
Q  296 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct- 394  Q
    |||||||||||||||||| |||| ||| |||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||| ||| |     
T  28949995 atttattaattttgttacgtctgaagctatttaacctaattttt-cccgcacatttgctttattaggtttgtaattatttaacctaacaaatttcatata 28949897  T
Q  395 aaaaaatgcatcgcaccaattt 416  Q
    ||||||||||||||| ||||||    
T  28949896 aaaaaatgcatcgcatcaattt 28949875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 302 - 420
Target Start/End: Complemental strand, 4100890 - 4100771
Alignment:
Q  302 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaa 400  Q
    |||||||||||  ||||||||||||||| |||||||||| ||||||||| | |||||||  |||||||||||||||||||| ||||| ||||||| ||||    
T  4100890 taattttgttaggtctgcagcaatttaatctaatttttttccgctcattagttttattagatttgcaattatttaacctaaaaaatttcatctaaaaaaa 4100791  T
Q  401 tgcatcgcaccaatttcatt 420  Q
    || |||||||||||||||||    
T  4100790 tggatcgcaccaatttcatt 4100771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 323 - 421
Target Start/End: Complemental strand, 44099747 - 44099650
Alignment:
Q  323 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 421  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||| |||||||||||||||    
T  44099747 aatttaacctaattttttttcgctcatttgctttattaggtttgcaattatttaacctaataaatttcatct-aaaaatgcattgcaccaatttcattc 44099650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 30083978 - 30084107
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattt-tttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||||||||||||||||  || |||||||||||| ||||||| ||| ||||| ||||||||||||| ||||| ||||||||||||  | |||||||||    
T  30083978 ttatttattaattttgttaggtccgcagcaatttaatctaatttcttttccgcttatttgctttattaggtttgaaattatttaaccatataaattccat 30084077  T
Q  393 ct-aaaaaatgcatcgcaccaatttcattc 421  Q
    || |||||||||||||||||| ||||||||    
T  30084078 ctaaaaaaatgcatcgcaccattttcattc 30084107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 400
Target Start/End: Original strand, 18912214 - 18912322
Alignment:
Q  293 tttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttg-caattatttaacctaacaaattcca 391  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||| |||||||||| |||||||| |||||  ||||||||||| ||||||||| ||    
T  18912214 tttatttattaattttgttatgtctgcagcaatttaatctaatttttttccgctcatttactttattaggtttgtaaattatttaacttaacaaatttca 18912313  T
Q  392 tctaaaaaa 400  Q
    |||||||||    
T  18912314 tctaaaaaa 18912322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 294 - 385
Target Start/End: Original strand, 33375630 - 33375721
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaa 385  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||||    
T  33375630 ttatttattaattttgttacgtctcaagcaatttaacctaatttttctccgctcatttactttattaggtttgcaattatttaacctaacaa 33375721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 302 - 420
Target Start/End: Original strand, 24595066 - 24595187
Alignment:
Q  302 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaat--tatttaacctaacaaattccatctaa-aa 398  Q
    |||||||||||| ||   |||||||||||||||||||||| |||| | || |||||||| |||||||||  |||||||||||||||||| ||||||| ||    
T  24595066 taattttgttacgtcgatagcaatttaacctaattttttctcgcttacttactttattaggtttgcaattatatttaacctaacaaatttcatctaacaa 24595165  T
Q  399 aatgcatcgcaccaatttcatt 420  Q
    ||||||||||||||||||||||    
T  24595166 aatgcatcgcaccaatttcatt 24595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 42497217 - 42497111
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||| || |||||||||||||||||||| | | |||||||||||||| |||| |||||||||||| ||| ||||||||||    
T  42497217 ttatttattaattttgttagatctacaacaatttaacctaattttttcgctcacatttgctttattaggtttacaattatttaacataataaattccatc 42497118  T
Q  394 taaaaaa 400  Q
    |||||||    
T  42497117 taaaaaa 42497111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 326 - 423
Target Start/End: Original strand, 52584966 - 52585064
Alignment:
Q  326 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattcat 423  Q
    |||||||||||||||||| || ||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||||| || |||||||||||||||||    
T  52584966 ttaacctaattttttcccacttatttgctttattaagtttgtaattatttaacctaacaaatttcatctaaaaaaatgaattgcaccaatttcattcat 52585064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 371
Target Start/End: Complemental strand, 28950093 - 28950016
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatt 371  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  28950093 ttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaatt 28950016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 421
Target Start/End: Complemental strand, 45417655 - 45417578
Alignment:
Q  345 ctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||||||||||| |||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  45417655 ctcatttgctttattaggtttgcaattatttaacctaacaaattaaatctaaaaaaatgcatcgcaccaatttcattc 45417578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 12115359 - 12115435
Alignment:
Q  348 atttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattcat 423  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  12115359 atttgctttattaggtttggaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcattcat 12115435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 24595255 - 24595321
Alignment:
Q  321 gcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 387  Q
    |||||||||| | ||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  24595255 gcaatttaacttcattttttcctgctcatttgctttattaggtttgcaattatttaacctaaaaaat 24595321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 43761946 - 43762075
Alignment:
Q  294 ttatttattaatttt-gttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    ||||||||||||||| ||||  | | || |||||||||||||| |||||| | ||||||  | ||||| ||| ||| | |||||| |||||||||| |||    
T  43761946 ttatttattaatttttgttaggtttacaacaatttaacctaatattttccggttcattttgtgtattaggttagcagtaatttaatctaacaaatttcat 43762045  T
Q  393 ctaaaaaa-tgcatcgcaccaatttcattc 421  Q
    |||||||| |||||||||||||||||||||    
T  43762046 ctaaaaaagtgcatcgcaccaatttcattc 43762075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 6537536 - 6537465
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgttt 365  Q
    |||||||||||||||||||  |||| | ||||||||| |||||||||||| |||||||||||||||| ||||    
T  6537536 ttatttattaattttgttaggtctgtaacaatttaacttaattttttcccactcatttgctttattaggttt 6537465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 294 - 349
Target Start/End: Complemental strand, 42492335 - 42492280
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcat 349  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||    
T  42492335 ttatttattaattttgttacgtctacagcaatttaacctatttttttcccgctcat 42492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 340
Target Start/End: Complemental strand, 45417741 - 45417699
Alignment:
Q  298 ttattaattttgttacctctgcagcaatttaacctaatttttt 340  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  45417741 ttattaattttgttaggtctgcagcaatttaacctaatttttt 45417699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 421
Target Start/End: Original strand, 47790726 - 47790778
Alignment:
Q  372 atttaacctaacaaattccatctaaaa---aatgcatcgcaccaatttcattc 421  Q
    ||||||||||||||||||| |||||||   |||||||||||||||||||||||    
T  47790726 atttaacctaacaaattccgtctaaaaaaaaatgcatcgcaccaatttcattc 47790778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 47790691 - 47790736
Alignment:
Q  289 catctttatttattaattttgttacctctgcagcaatttaacctaa 334  Q
    |||| |||||||||||||||||||  ||||||||||||||||||||    
T  47790691 catccttatttattaattttgttaggtctgcagcaatttaacctaa 47790736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 48552932 - 48552883
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 343  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||    
T  48552932 ttatttattaattttgttaagtctacagcaacttaacctaattttttccc 48552883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 48553041 - 48552992
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 343  Q
    |||||||||||||||||||  | |||||||| ||||||||||||||||||    
T  48553041 ttatttattaattttgttaagtttgcagcaacttaacctaattttttccc 48552992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 14427392 - 14427352
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  14427392 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 14427352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 35003339 - 35003299
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  35003339 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 35003299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 44112722 - 44112682
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  44112722 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 44112682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 48119673 - 48119633
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  48119673 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 48119633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 382
Target Start/End: Complemental strand, 48412031 - 48411972
Alignment:
Q  323 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaa 382  Q
    |||||||||||| ||||||||  |||||||||||||||  |||| |||||||||| ||||    
T  48412031 aatttaacctaaatttttccctttcatttgctttattaaatttgtaattatttaatctaa 48411972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 11928235 - 11928277
Alignment:
Q  372 atttaacctaacaaattccatctaaaaaatgcatcgcaccaattt 416  Q
    |||||||||||||||||||||||  |||||||| |||||||||||    
T  11928235 atttaacctaacaaattccatct--aaaatgcagcgcaccaattt 11928277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 346
Target Start/End: Original strand, 52584880 - 52584930
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgct 346  Q
    |||||||||||||||||||| |  ||||||| ||||||||||||||| |||||    
T  52584880 ttatttattaattttgttacgt--gcagcaacttaacctaatttttttccgct 52584930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 5489821 - 5489781
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  5489821 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 5489781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 421
Target Start/End: Original strand, 24595313 - 24595341
Alignment:
Q  393 ctaaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||||||||||||||||||||||||    
T  24595313 ctaaaaaatgcatcgcaccaatttcattc 24595341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 38113250 - 38113290
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||| ||||||    
T  38113250 tgtacaatagggtgtatgattaaagggtgttcatataacat 38113290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 38335963 - 38335923
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  38335963 tgtacaataaggtgtatgattaaagggtgttcatgtaacat 38335923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 41065198 - 41065158
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  41065198 tgtacaacagggtgtatgattaaagggtgttcatgtaacat 41065158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 43571141 - 43571181
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  43571141 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 43571181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 52740915 - 52740955
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaa 334  Q
    |||||||||||||||||||  |||||| |||||||||||||    
T  52740915 ttatttattaattttgttaggtctgcaacaatttaacctaa 52740955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 3e-52; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 46451470 - 46451598
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46451470 ttatttattaattttgttacgtctgcagtaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacctaacaaattccatc 46451569  T
Q  394 taaaa-aatgcatcgcaccaatttcattc 421  Q
    ||||| |||||||||||||||||||||||    
T  46451570 taaaataatgcatcgcaccaatttcattc 46451598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 47503159 - 47503031
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  47503159 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacctaacaaatttcatc 47503060  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| |||||||||||||||||||||||||    
T  47503059 taaaaaaatgcatcgcaccaatttcattc 47503031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 290 - 420
Target Start/End: Complemental strand, 53047697 - 53047567
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||     
T  53047697 atctttatttattaattttgttaggtctgcagcaatttaacataattttttcccgctcatttgctttgttaggtttgcaattatttaacctaacaaattt 53047598  T
Q  390 catctaaaaaatgcatcgcaccaatttcatt 420  Q
    ||| |||||||||||||||||||||||||||    
T  53047597 catttaaaaaatgcatcgcaccaatttcatt 53047567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 18094956 - 18095086
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  18094956 ttatttattaattttgttaggtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatgatttaacctaacaaattccatc 18095055  T
Q  394 -taaaaaatgcatcgcaccaatttcattcat 423  Q
     ||||||||| ||||||||||||||||||||    
T  18095056 ttaaaaaatgaatcgcaccaatttcattcat 18095086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 837309 - 837181
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||||||||| |||  |||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  837309 ttatttattaattttattatgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 837210  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| |||||||||||||||||||||||||    
T  837209 taaaaaaatgcatcgcaccaatttcattc 837181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 36643233 - 36643105
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36643233 ttatttattaattttgttacgtatgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 36643134  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| |||||| ||||||||||||| ||||    
T  36643133 taaaaaaatgtatcgcaccaatttgattc 36643105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 296 - 417
Target Start/End: Original strand, 43017273 - 43017396
Alignment:
Q  296 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct- 394  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||     
T  43017273 atttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaacaaatttcatcta 43017372  T
Q  395 -aaaaaatgcatcgcaccaatttc 417  Q
     ||||||||||| |||||||||||    
T  43017373 aaaaaaatgcattgcaccaatttc 43017396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 38887471 - 38887343
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||     
T  38887471 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcata 38887372  T
Q  394 taaaaaa--tgcatcgcaccaatttcatt 420  Q
    |||||||  || |||||||||||||||||    
T  38887371 taaaaaaagtggatcgcaccaatttcatt 38887343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 291 - 421
Target Start/End: Original strand, 35560098 - 35560230
Alignment:
Q  291 tctttatttattaattttgttacctctgcagcaatttaacctaa-ttttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||| || |||||||||||||||| |||||||||||||||||||||||||||     
T  35560098 tctttatttattaattttgttacttctgcagcaatttaacctaattttttttcctctcatttgctttattaggtttgcaattatttaacctaacaaattt 35560197  T
Q  390 cat-ctaaaaaatgcatcgcaccaatttcattc 421  Q
    ||| | |||||||||||||||||||||||||||    
T  35560198 catccaaaaaaatgcatcgcaccaatttcattc 35560230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 289 - 423
Target Start/End: Original strand, 11454200 - 11454335
Alignment:
Q  289 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 388  Q
    |||| |||||||||||||||||||  |||||| |||||||||||||||||||||||||||| | |||||||  |||||||||||||||||||||||||||    
T  11454200 catccttatttattaattttgttatgtctgcaacaatttaacctaattttttcccgctcatctactttatttggtttgcaattatttaacctaacaaatt 11454299  T
Q  389 ccatct-aaaaaatgcatcgcaccaatttcattcat 423  Q
     ||||| |||||||||||||||||||||||||||||    
T  11454300 tcatctaaaaaaatgcatcgcaccaatttcattcat 11454335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 18094741 - 18094871
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||     
T  18094741 ttatttattaattttgttaggtctgcagcaatttaacttaattttttcccgctaatttgctttattaggtttgcaattatttaacctaacaaatcccata 18094840  T
Q  394 t-aaaaaatgcatcgcaccaatttcattcat 423  Q
    | |||||| ||||||||||||||||||||||    
T  18094841 taaaaaaaagcatcgcaccaatttcattcat 18094871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 11454562 - 11454679
Alignment:
Q  294 ttatttattaatttt-gttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  11454562 ttatttattaatttttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatcatttaacctaacaaattccat 11454661  T
Q  393 c-taaaaaatgcatcgca 409  Q
    | ||||||||||||||||    
T  11454662 cttaaaaaatgcatcgca 11454679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 298 - 421
Target Start/End: Original strand, 37760501 - 37760625
Alignment:
Q  298 ttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat-ctaa 396  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||    
T  37760501 ttattaattttgttacgtctgcaacaatttaacctaaatttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatccaaa 37760600  T
Q  397 aaaatgcatcgcaccaatttcattc 421  Q
    |||||| ||||||||||||||||||    
T  37760601 aaaatgtatcgcaccaatttcattc 37760625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 40050850 - 40050977
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  40050850 ttatttatttattttgttagttctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaataatttaacctaacaaatt-catc 40050948  T
Q  394 ta-aaaaatgcatcgcaccaatttcattc 421  Q
    || ||||||||||||||||||||| ||||    
T  40050949 tacaaaaatgcatcgcaccaatttaattc 40050977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 20877322 - 20877194
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||| |||||   ||||||||||||||||||| ||||    
T  20877322 ttatttattaattttgttacgtctgcagcaatttaatctaattttttccctctcatttactttattaggtttgtcgttatttaacctaacaaatttcatc 20877223  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| |||||||||||||||||||||||||    
T  20877222 taaaaaaatgcatcgcaccaatttcattc 20877194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 38887686 - 38887556
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttc--ccgctcatttgctttattatgtttgcaattatttaacctaacaaattcca 391  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  38887686 ttatttattaattttattaggtctgcagcaatttaacctaatttttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattcct 38887587  T
Q  392 tct-aaaaaatgcatcgcaccaatttcattc 421  Q
    ||| |||||||||||||||| ||||||||||    
T  38887586 tctaaaaaaatgcatcgcacaaatttcattc 38887556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 47503333 - 47503204
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    ||||||||||||||| |||| ||| |  |||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  47503333 ttatttattaattttattacgtctacgacaatttaacctattttttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcat 47503234  T
Q  393 ctaa-aaaatgcatcgcaccaatttcattc 421  Q
    |||| |||||||||||||||||||||||||    
T  47503233 ctaaaaaaatgcatcgcaccaatttcattc 47503204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 45514524 - 45514419
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||||||| ||||| ||||    
T  45514524 ttatttattaattttgttacgtctgcagcaatttaatctaattttttcccgttcatttactttatta-gtttgcaattatttaacctaataaatttcatc 45514426  T
Q  394 taaaaaa 400  Q
    |||||||    
T  45514425 taaaaaa 45514419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 11454381 - 11454512
Alignment:
Q  294 ttatttattaattttgtt---acctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattcc 390  Q
    ||||||||||||||||||   || |||||||||||||| ||||||||||||  ||||||||||||||||| | ||||||||||||||||||||||| | |    
T  11454381 ttatttattaattttgttgttacgtctgcagcaatttatcctaattttttct-gctcatttgctttattaggcttgcaattatttaacctaacaaacttc 11454479  T
Q  391 atct--aaaaaatgcatcgcaccaatttcattc 421  Q
    ||||  |||||||||||||||||||||||||||    
T  11454480 atctaaaaaaaatgcatcgcaccaatttcattc 11454512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 323 - 421
Target Start/End: Original strand, 47519955 - 47520054
Alignment:
Q  323 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaa-aaatgcatcgcaccaatttcattc 421  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| || |||||||||| |||||||||||| ||||| |||||    
T  47519955 aatttaacctaattttttcccgctcatttgctttattagggttgcaattatttaacctaaccaagtccatctaaagaaatgcatcgcatcaattccattc 47520054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 16015356 - 16015250
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||| ||||||||  ||| | | |||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||| |||    
T  16015356 ttatttattagttttgttaggtctacggaaatttaacctaattttttcccgctcatttgctttattaggttaacaattatttaacctaacaaattctatc 16015257  T
Q  394 taaaaaa 400  Q
    |||||||    
T  16015256 taaaaaa 16015250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 296 - 420
Target Start/End: Original strand, 43819330 - 43819455
Alignment:
Q  296 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 395  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||| |||  || | ||||||||||| || || ||||||    
T  43819330 atttattaattttgttaggtctgcagcaatttaacctaatattttcccgctcatttgctgtattaagttaacactaatttaacctaataattttcatcta 43819429  T
Q  396 aaa-aatgcatcgcaccaatttcatt 420  Q
    ||| ||||||| ||||||||||||||    
T  43819430 aaacaatgcattgcaccaatttcatt 43819455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 331 - 421
Target Start/End: Original strand, 46451320 - 46451412
Alignment:
Q  331 ctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct--aaaaaatgcatcgcaccaatttcattc 421  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||    
T  46451320 ctaatttttccccgctcatttgctttattagatttgcaattatttaacctaacaaatttcatctaaaaaaaatgcatcgcaccaatttcattc 46451412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 298 - 383
Target Start/End: Complemental strand, 47519956 - 47519871
Alignment:
Q  298 ttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac 383  Q
    |||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  47519956 ttattaattttgttagttttgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgtaattatttaacctaac 47519871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 294 - 389
Target Start/End: Complemental strand, 38887901 - 38887806
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    ||||||||||||||| | |  ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  38887901 ttatttattaattttatcaggtctgcagtaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacgtaacaaattc 38887806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 295 - 421
Target Start/End: Complemental strand, 21969111 - 21968986
Alignment:
Q  295 tatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct 394  Q
    |||||||||||||| |||  || |||||||||||| |||||||||| |  |  ||||||| ||||| ||| ||| | |||||||||||||||||||||||    
T  21969111 tatttattaattttattaggtcagcagcaatttaatctaatttttttctcca-atttgctgtattaggttagcagtaatttaacctaacaaattccatct 21969013  T
Q  395 aaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||||||||||||||||||||||    
T  21969012 aaaaaatgcatcgcaccaatttcattc 21968986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 295 - 421
Target Start/End: Complemental strand, 21991547 - 21991422
Alignment:
Q  295 tatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct 394  Q
    |||||||||||||| |||  || |||||||||||| |||||||||| |  |  ||||||| ||||| ||| ||| | |||||||||||||||||||||||    
T  21991547 tatttattaattttattaggtcagcagcaatttaatctaatttttttctcca-atttgctgtattaggttagcagtaatttaacctaacaaattccatct 21991449  T
Q  395 aaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||||||||||||||||||||||    
T  21991448 aaaaaatgcatcgcaccaatttcattc 21991422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 409
Target Start/End: Original strand, 11453937 - 11454054
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||||||||||||||||| | || |  ||||||| |||||||||| | || ||||||||||||||| ||||||||||||||||||||||||||| |||    
T  11453937 ttatttattaattttgttacgtttgaaataatttaatctaatttttttctcgttcatttgctttattaggtttgcaattatttaacctaacaaattacat 11454036  T
Q  393 ct-aaaaaatgcatcgca 409  Q
    || |||||||||||||||    
T  11454037 ctaaaaaaatgcatcgca 11454054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 323 - 400
Target Start/End: Original strand, 24365763 - 24365840
Alignment:
Q  323 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaa 400  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||| |||||||||||    
T  24365763 aatttaacctaattttttcccgctcatttgatttattaggtttgcaattatttaacctaacgaatttcatctaaaaaa 24365840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 11522532 - 11522662
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||| || ||||||||||||||||||| | | ||||||| ||||||| |||| ||||| |||||||||||||||| ||||    
T  11522532 ttatttattaattttgttaggtctacaacaatttaacctaatttttttcagttcatttgttttattaggtttacaattgtttaacctaacaaatttcatc 11522631  T
Q  394 taaaaa---atgcatcgcaccaatttcattc 421  Q
    ||||||   ||| | ||||||||||||||||    
T  11522632 taaaaatatatgaaccgcaccaatttcattc 11522662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 11220780 - 11220906
Alignment:
Q  297 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-a 395  Q
    ||||||||||||||||  ||||||||||||||||||||| |||| || || ||||||| ||||| ||| ||| | |||| |||||||||||| ||||| |    
T  11220780 tttattaattttgttaggtctgcagcaatttaacctaatatttttcc-cttatttgctgtattaggttagcagtaattttacctaacaaatttcatctaa 11220878  T
Q  396 aaaaatgcatcgcaccaatttcattcat 423  Q
    |||||||||| |||||||||||||||||    
T  11220879 aaaaatgcattgcaccaatttcattcat 11220906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 46451078 - 46451181
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||| ||| |||||| ||||||||  ||||||||| |||||||||| ||   ||| |||||||||||||||||||||||||||| |||    
T  46451078 ttatttattaattttgatacgtctgcaacaatttaaattaatttttttccgctcatttcct---ttaagtttgcaattatttaacctaacaaattctatc 46451174  T
Q  394 taaaaaa 400  Q
    |||||||    
T  46451175 taaaaaa 46451181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 330 - 423
Target Start/End: Original strand, 52300747 - 52300841
Alignment:
Q  330 cctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattcat 423  Q
    |||||||||||||||||||||| || ||||| ||| ||| | ||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  52300747 cctaattttttcccgctcatttactgtattaggttagcagtaatttaacctaacaaattccatttaaaaaaatgcattgcaccaatttcattcat 52300841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 398
Target Start/End: Original strand, 850932 - 851036
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||  ||| | || ||||||||||| ||||||||| ||||||||||  ||||||| ||||||||||||||||  ||||||||| ||||    
T  850932 ttatttattaatttttgtacatttgtagcaatttaacttaatttttttccgctcatttattttattaggtttgcaattatttaagttaacaaatttcatc 851031  T
Q  394 taaaa 398  Q
    |||||    
T  851032 taaaa 851036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 51654074 - 51654138
Alignment:
Q  324 atttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 388  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  51654074 atttaacctaattttttcccgctcatttgttttattaggtttacaattatttaacctaacaaatt 51654138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 3847825 - 3847945
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||||||||||||||||||| ||||| |||||||||||| ||        |   | ||||||||||||||||| ||||    
T  3847825 ttatttattaattttgttaggtctgcagcaatttaacctaatattttcgcgctcatttgctgta--------gtggtgatttaacctaacaaatttcatc 3847916  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||||||||||||||||||    
T  3847917 taaaaaaatgcatcgcaccaatttcattc 3847945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 416
Target Start/End: Original strand, 851039 - 851088
Alignment:
Q  368 aattatttaacctaacaaattccatctaaaa-aatgcatcgcaccaattt 416  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  851039 aattatttaacctaacaaatttcatctaaaagaatgcatcgcaccaattt 851088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 416
Target Start/End: Complemental strand, 25917546 - 25917426
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||||||||| |||  |||||||||| ||||||||||  |||||| || |  || |  |||| ||| |||   ||||||||||||||||||||||    
T  25917546 ttatttattaattttattaagtctgcagcaacttaacctaataatttccctctaaaatgttacattaggttagcagcaatttaacctaacaaattccatc 25917447  T
Q  394 taaaaaatgcatcgcaccaattt 416  Q
    |  |||||||| |||||||||||    
T  25917446 t--aaaatgcagcgcaccaattt 25917426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 46451252 - 46451299
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttc 341  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||||    
T  46451252 ttatttattaattttgttacgtctccaacaatttaacctaattttttc 46451299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 386
Target Start/End: Original strand, 54274787 - 54274824
Alignment:
Q  349 tttgctttattatgtttgcaattatttaacctaacaaa 386  Q
    |||||||||||| |||||||||||||||||||||||||    
T  54274787 tttgctttattaggtttgcaattatttaacctaacaaa 54274824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 4190320 - 4190360
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  4190320 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 4190360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 398
Target Start/End: Original strand, 17755732 - 17755840
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    ||||||||||||||||||| |||  || ||||||||||||||||||  |||||| || |  || |  ||||  || |||   ||||||||||||||||||    
T  17755732 atctttatttattaattttattaggtccgcagcaatttaacctaataatttccctctaaaatgttgcattagattagcagcaatttaacctaacaaattc 17755831  T
Q  390 catctaaaa 398  Q
    |||||||||    
T  17755832 catctaaaa 17755840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 398
Target Start/End: Original strand, 19057052 - 19057160
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    ||||||||||||||||||| |||  || ||||||||||||||||||  |||||| || |  || |  ||||  || |||   ||||||||||||||||||    
T  19057052 atctttatttattaattttattaggtccgcagcaatttaacctaataatttccctctaaaatgttgcattagattagcagcaatttaacctaacaaattc 19057151  T
Q  390 catctaaaa 398  Q
    |||||||||    
T  19057152 catctaaaa 19057160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 25413726 - 25413686
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  25413726 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 25413686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 54246203 - 54246243
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  54246203 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 54246243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 421
Target Start/End: Original strand, 54274725 - 54274779
Alignment:
Q  368 aattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 421  Q
    ||||||||||||||||||||| ||||| |||||||||||||  ||||||| ||||    
T  54274725 aattatttaacctaacaaatttcatctaaaaaaatgcatcgtcccaattttattc 54274779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 9434169 - 9434129
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| | |||||||| |||||||||||||||||||||    
T  9434169 tgtacaatagagtgtatgattaaagggtgttcatgtaacat 9434129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 10457947 - 10457987
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  10457947 tgtacaatagggtgtatgattaaaaggtgttcatgtaacat 10457987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 36150175 - 36150135
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||| |||||||||||||| |||||||| ||||||||||||    
T  36150175 tgtataatggggtgtatgaataaagggtattcatgtaacat 36150135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 40480794 - 40480754
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||||  ||||| |||||||||||||||||||||    
T  40480794 tgtacaatggggcatatgaataaagggtgttcatgtaacat 40480754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 42100733 - 42100693
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  42100733 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 42100693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 45126983 - 45127023
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  45126983 tgtacaatgggatgtatgaataaagggtgtttatgtaacat 45127023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 47191080 - 47191120
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  47191080 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 47191120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 53581913 - 53581953
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||||| |||||||| ||||| |||||||||||||||    
T  53581913 tgtacaatggagtgtatgaataaagagtgttcatgtaacat 53581953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 54237141 - 54237101
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  54237141 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 54237101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 6e-50; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 28612339 - 28612211
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  | |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28612339 ttatttattaattttgttagttttgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 28612240  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| |||||||||||||||||||||||||    
T  28612239 taaaaaaatgcatcgcaccaatttcattc 28612211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 28611914 - 28611786
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  28611914 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgcttgattaggtttgcaattatttaacctaacaagttccatc 28611815  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| |||||||||||||||||| ||||||    
T  28611814 taaaaaaatgcatcgcaccaatatcattc 28611786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 290 - 421
Target Start/End: Complemental strand, 41995863 - 41995731
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    |||||||||||||||||||||||  |||| | ||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||    
T  41995863 atctttatttattaattttgttatgtctgaaacaatttaacctaattttttcctgttcatttgctttattaggtttgcaattatttaacctaacaaattc 41995764  T
Q  390 catctaaaaa-atgcatcgcaccaatttcattc 421  Q
    |||||||||| ||||||||||| ||||||||||    
T  41995763 catctaaaaacatgcatcgcacgaatttcattc 41995731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 290 - 420
Target Start/End: Original strand, 44256469 - 44256600
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| ||| |||||||||||| |||||     
T  44256469 atctttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcattttctttattaggttttcaagtatttaacctaataaattt 44256568  T
Q  390 catct-aaaaaatgcatcgcaccaatttcatt 420  Q
    ||||| ||||||||||||||||||||||||||    
T  44256569 catctaaaaaaatgcatcgcaccaatttcatt 44256600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 10129603 - 10129475
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||| |||||| |||    
T  10129603 ttatttattaattttgttaggtctgcagcaatttaacctaatttgttctcgctcatttgctttattaggtttgcaattatttaacctaataaattctatc 10129504  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | ||||||| |||||||||||||||||||    
T  10129503 taaaaaaattcatcgcaccaatttcattc 10129475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 6348072 - 6348199
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||  ||||||||| ||||    
T  6348072 ttatttattaattttgttacgtctgcagcaatttaacataattttttctcgctcaattgctttattaggtttgcaattatttaatttaacaaatttcatc 6348171  T
Q  394 t-aaaaaatgcatcgcaccaatttcatt 420  Q
    | ||||||||||||||||||||||||||    
T  6348172 taaaaaaatgcatcgcaccaatttcatt 6348199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 289 - 421
Target Start/End: Complemental strand, 37131598 - 37131466
Alignment:
Q  289 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 388  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||| |||||||||    
T  37131598 catccttatttattaattttgttagatctgcagcaatttaacctaatttttttccactcatttgctttatta-gtttgcaattatttaacttaacaaatt 37131500  T
Q  389 ccatct-aaaaaatgcatcgcaccaatttcattc 421  Q
     ||||| |||||||||||| ||||||||||||||    
T  37131499 tcatctaaaaaaatgcatcacaccaatttcattc 37131466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 5001777 - 5001677
Alignment:
Q  322 caatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatttcatt 420  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  5001777 caatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcatt 5001678  T
Q  421 c 421  Q
    |    
T  5001677 c 5001677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 28612761 - 28612633
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||   ||||| |||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  28612761 ttatttattaattttgttagg-ctgcaacaatttaacctaatcttttcccgctcatt-gctttattaggtttgcaattatttaacctaacaaatttcatc 28612664  T
Q  394 taa-aaaatgcatcgcaccaatttcattcat 423  Q
    ||| |||||||||||||||||||||||||||    
T  28612663 taaaaaaatgcatcgcaccaatttcattcat 28612633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 11735910 - 11736037
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  | ||||||||||||||||||| ||||||||||||||||||| || | ||||||||||||||||||||||||||| ||||    
T  11735910 ttatttattaattttgttaggt-tgcagcaatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaacaaatttcatc 11736008  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | ||||||||||||||||| |||||||||    
T  11736009 taaaaaaatgcatcgcaccgatttcattc 11736037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 28612975 - 28612846
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatg-tttgcaattatttaacctaacaaattccat 392  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||| || ||||||| ||||||| | ||| ||||||||||| ||||||||||||||    
T  28612975 ttatttattaattttgttaggtctgcaacaatttaacctaattttttctcgttcatttgttttattaggtttttcaattatttaatctaacaaattccat 28612876  T
Q  393 ctaaaa-aatgcatcgcaccaatttcattc 421  Q
    |||||| |||||||||||||||||||||||    
T  28612875 ctaaaataatgcatcgcaccaatttcattc 28612846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 28612127 - 28611999
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| |||    |||    
T  28612127 ttatttattaattttgttaggtctgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattatttaacctaaaaaaaattatc 28612028  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||||||||||||||||||    
T  28612027 taaaaaaatgcatcgcaccaatttcattc 28611999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 29550133 - 29550265
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattat----gtttgcaattatttaacctaacaaattc 389  Q
    ||||||||||||||| |||  |||||| ||||||||||||||||||| |||||||||||||||||||     ||||||||||||||||||||||||||||    
T  29550133 ttatttattaattttattaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagctaggtttgcaattatttaacctaacaaattc 29550232  T
Q  390 catct--aaaaaatgcatcgcaccaatttcatt 420  Q
     ||||  ||||||||||||||||||||||||||    
T  29550233 aatctaaaaaaaatgcatcgcaccaatttcatt 29550265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 318 - 420
Target Start/End: Original strand, 11736325 - 11736428
Alignment:
Q  318 gcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaattt 416  Q
    |||||||||||||||||| ||||||||||||||||||| || | ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  11736325 gcagcaatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaattt 11736424  T
Q  417 catt 420  Q
    ||||    
T  11736425 catt 11736428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 3249905 - 3249777
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||| |||||||||||||| |||| ||||| ||||||| ||||| ||| ||| | ||||||||||||||||| ||||    
T  3249905 ttatttattaattttgttagatctgcaacaatttaacctaatatttttccgcttatttgctgtattaggttagcagtaatttaacctaacaaatttcatc 3249806  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| |||||||||||||||||||||||||    
T  3249805 taaaaaaatgcatcgcaccaatttcattc 3249777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 5001627 - 5001499
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| || ||||||||||||||| |||  || ||||||||||||| ||||| ||||    
T  5001627 ttatttattaattttgttaggtctgcagcaatttaaactaattttttctcgttcatttgctttattaggttaacagttatttaacctaaaaaatttcatc 5001528  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| |||||||||||||||||||| ||||    
T  5001527 taaaaaaatgcatcgcaccaatttaattc 5001499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 28612551 - 28612424
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||   ||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||| |||||  |||    
T  28612551 ttatttattaattttgttagg-ctgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattacttaacctaaaaaattttatc 28612453  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||||||||||||||||||    
T  28612452 taaaaaaatgcatcgcaccaatttcattc 28612424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 297 - 420
Target Start/End: Original strand, 41326372 - 41326496
Alignment:
Q  297 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-a 395  Q
    ||||||||||||||||  |||||| ||||||||| |||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||||   |||| |    
T  41326372 tttattaattttgttaggtctgcaacaatttaacttaatttttccccgctcatttgttttattaagtttgcaattatttaacctaataaatcttatctaa 41326471  T
Q  396 aaaaatgcatcgcaccaatttcatt 420  Q
    |||||||||||||||||||||||||    
T  41326472 aaaaatgcatcgcaccaatttcatt 41326496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 294 - 398
Target Start/End: Complemental strand, 44543821 - 44543717
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| || ||| |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||| |||||| |||    
T  44543821 ttatttattaattttgttacgtccgcaacaatttaacctaatttttccccgctcatttgctttatttggtttgcaattatttaacctaaaaaattctatc 44543722  T
Q  394 taaaa 398  Q
    |||||    
T  44543721 taaaa 44543717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 294 - 385
Target Start/End: Original strand, 627537 - 627628
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaa 385  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  627537 ttatttattaattttgttacgtttgcagcaatttaacctaattttttcccgctcatttactttattacatttgcaattatttaacctaacaa 627628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 12898023 - 12898129
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||||||||||||||| || |||| |||||||||| |||| ||| |||||||||||||||| |||||||||||||||    
T  12898023 ttatttattaattttgttagatctgcagcaatttaacctgatatttttccgctcatttactttgttaggtttgcaattatttaatctaacaaattccatc 12898122  T
Q  394 taaaaaa 400  Q
    |||||||    
T  12898123 taaaaaa 12898129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 296 - 421
Target Start/End: Original strand, 29549960 - 29550086
Alignment:
Q  296 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct- 394  Q
    |||||||||||||||||  ||||||  ||||||||||||||||||| || ||||||||||||||| |||||  ||||||||||||||||||||| || |     
T  29549960 atttattaattttgttaggtctgcactaatttaacctaattttttctcgttcatttgctttattaggtttgttattatttaacctaacaaattctattta 29550059  T
Q  395 aaaaaatgcatcgcaccaatttcattc 421  Q
    ||||||||||||||||| |||||||||    
T  29550060 aaaaaatgcatcgcaccgatttcattc 29550086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 5013301 - 5013208
Alignment:
Q  295 tatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 388  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||  |||||||||    
T  5013301 tatttattaattttgttacgtctgcagcaatttaacctaaatttttcccgctcatttgctttattaggtttacaattatttaatttaacaaatt 5013208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 294 - 398
Target Start/End: Complemental strand, 44544032 - 44543928
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| || ||| ||||||||| |||||||||||| ||||||||| |||||| ||||| ||||||||||||||| ||||||||||    
T  44544032 ttatttattaattttgttacgtccgcaacaatttaacataattttttcccactcatttgcattattaagtttgtaattatttaacctaataaattccatc 44543933  T
Q  394 taaaa 398  Q
    |||||    
T  44543932 taaaa 44543928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 3249688 - 3249561
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||||||||||||| ||||| |||||||||||||||||| ||||| |||  || | |||||||||||||| || ||||    
T  3249688 ttatttattaattttgttaggtctgcagcaatttaagctaatattttcccgctcatttgctatattaggttaacagtaatttaacctaacaattttcatc 3249589  T
Q  394 taa-aaaatgcatcgcaccaatttcatt 420  Q
    ||| ||||| ||||||||||||||||||    
T  3249588 taaaaaaatacatcgcaccaatttcatt 3249561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 421
Target Start/End: Complemental strand, 5001442 - 5001352
Alignment:
Q  332 taattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatttcattc 421  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||    
T  5001442 taattttttctcgctcatttgctttattaggtttgcaattatttaacctaaaaagttccatctaaaaaaatgcatcgcaccaatttcattc 5001352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 421
Target Start/End: Complemental strand, 5013112 - 5013022
Alignment:
Q  332 taattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatttcattc 421  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||    
T  5013112 taattttttctcgctcatttgctttattaggtttgcaattatttaacctaaaaagttccatctaaaaaaatgcatcgcaccaatttcattc 5013022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 29549791 - 29549919
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||| ||||||||||  ||| || | ||||||| || |||||| ||||||||||||||||||| |||| |||||||||||||||| ||||| ||||    
T  29549791 ttatttatgaattttgttaggtctacaaccatttaacttattttttttccgctcatttgctttattaggtttacaattatttaacctaataaatttcatc 29549890  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||| ||||||||||||||||    
T  29549891 taaaaaaatgcaccgcaccaatttcattc 29549919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 347 - 423
Target Start/End: Original strand, 627629 - 627706
Alignment:
Q  347 catttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattcat 423  Q
    ||||| |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  627629 catttactttattacgtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcattcat 627706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 316 - 421
Target Start/End: Original strand, 11657474 - 11657576
Alignment:
Q  316 ctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaat 414  Q
    |||||||| ||||||||||||||||| || |||||||||   ||| |||||||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  11657474 ctgcagcattttaacctaattttttctcgttcatttgct---ttaggtttgcaattatttaa-ctaacaaatttcatctaaaaaaatgcatcgcaccaat 11657569  T
Q  415 ttcattc 421  Q
    |||||||    
T  11657570 ttcattc 11657576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 294 - 416
Target Start/End: Complemental strand, 12896532 - 12896407
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat- 392  Q
    |||||||||||||||||||  ||| || ||||||||| |||| |||| ||||||||||| ||||||| |||||||||||||||| |||| |||||||||     
T  12896532 ttatttattaattttgttatgtctacaacaatttaacttaatctttttccgctcatttgttttattaggtttgcaattatttaatctaataaattccata 12896433  T
Q  393 --ctaaaaaatgcatcgcaccaattt 416  Q
        |||||||||||||||| |||||    
T  12896432 aaaaaaaaaatgcatcgcactaattt 12896407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 336 - 421
Target Start/End: Original strand, 6347935 - 6348020
Alignment:
Q  336 tttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaa-tgcatcgcaccaatttcattc 421  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||    
T  6347935 tttttcccgctcatttgctttatta-gtttacaattatttaacctaacaaatttcatctaaaaaattatatcgcaccaatttcattc 6348020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 357 - 421
Target Start/End: Original strand, 20708899 - 20708964
Alignment:
Q  357 attatgtttgcaattatttaacctaacaaattccatctaaa-aaatgcatcgcaccaatttcattc 421  Q
    |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  20708899 attaagtttgcaattatttaacctaacaaatttcatctaaataaatgcatcgcaccaatttcattc 20708964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 315 - 401
Target Start/End: Original strand, 19640327 - 19640414
Alignment:
Q  315 tctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaat 401  Q
    ||||||||||||||| ||||||||||   || ||||||  ||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  19640327 tctgcagcaatttaatctaatttttttttcgttcatttattttattgggtttgcaattatttaacctaataaattccatctaaaaaat 19640414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 315 - 401
Target Start/End: Original strand, 19838920 - 19839007
Alignment:
Q  315 tctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaat 401  Q
    ||||||||||||||| ||||||||||   || ||||||  ||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  19838920 tctgcagcaatttaatctaatttttttttcgttcatttattttattgggtttgcaattatttaacctaataaattccatctaaaaaat 19839007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 368 - 421
Target Start/End: Complemental strand, 44543714 - 44543660
Alignment:
Q  368 aattatttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcattc 421  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  44543714 aattatttaacctaacaaatttcatctaaaagaatgcatcacaccaatttcattc 44543660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 2132309 - 2132238
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgttt 365  Q
    ||||||||||| |||||||  |||||| ||||||||||||||||||  | ||||||||||||| ||| ||||    
T  2132309 ttatttattaagtttgttaggtctgcaacaatttaacctaatttttctctgctcatttgcttttttaggttt 2132238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 966889 - 966929
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  966889 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 966929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 1750459 - 1750419
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  1750459 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 1750419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 11825709 - 11825749
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  11825709 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 11825749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 16804013 - 16803973
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  16804013 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 16803973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 16843295 - 16843255
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  16843295 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 16843255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 18491750 - 18491710
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  18491750 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 18491710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 41282029 - 41282069
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  41282029 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 41282069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 43114602 - 43114562
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  43114602 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 43114562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 416
Target Start/End: Complemental strand, 17930585 - 17930465
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||||||||| |||  |||||| ||| ||||||||||  || |||  | |  ||||  |||| |||||||   ||||||||||||||||||||||    
T  17930585 ttatttattaattttattaggtctgcaacaacttaacctaataattcccctttaaaatgctgaattaggtttgcagcaatttaacctaacaaattccatc 17930486  T
Q  394 taaaaaatgcatcgcaccaattt 416  Q
    |  |||||||| |||||||||||    
T  17930485 t--aaaatgcaacgcaccaattt 17930465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 291
Target Start/End: Complemental strand, 7070459 - 7070421
Alignment:
Q  253 tacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  7070459 tacaatgggatgtatgaataaagggtgttcatgtaacat 7070421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 416
Target Start/End: Complemental strand, 15256590 - 15256548
Alignment:
Q  372 atttaacctaacaaattccatctaaaaaatgcatcgcaccaattt 416  Q
    |||||||||||||||||||||||  |||||||| |||||||||||    
T  15256590 atttaacctaacaaattccatct--aaaatgcaacgcaccaattt 15256548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 366
Target Start/End: Original strand, 17370109 - 17370150
Alignment:
Q  325 tttaacctaattttttcccgctcatttgctttattatgtttg 366  Q
    |||||||||||||| ||||||||||||| ||||||| |||||    
T  17370109 tttaacctaattttctcccgctcatttgttttattaggtttg 17370150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 20641700 - 20641641
Alignment:
Q  294 ttatttattaattttgttacc---tctgcagcaatttaacctaattttttcccgctcatt 350  Q
    |||||||||||||||||||     |||||| ||| |||||||||||||||||||||||||    
T  20641700 ttatttattaattttgttattaggtctgcaacaagttaacctaattttttcccgctcatt 20641641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 4299475 - 4299515
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||| ||||||    
T  4299475 tgtacaatagggtgtatgattaaagggtgttcatataacat 4299515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 423
Target Start/End: Original strand, 11736228 - 11736256
Alignment:
Q  395 aaaaaatgcatcgcaccaatttcattcat 423  Q
    |||||||||||||||||||||||||||||    
T  11736228 aaaaaatgcatcgcaccaatttcattcat 11736256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 12302308 - 12302348
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  12302308 tgtacaatggggtgtagaaataaagggtgttcatgtaacat 12302348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 12415515 - 12415555
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  12415515 tgtacaataaggtgtatgattaaagggtgttcatgtaacat 12415555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 12427575 - 12427615
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  12427575 tgtacaataaggtgtatgattaaagggtgttcatgtaacat 12427615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 16096792 - 16096752
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||| ||||||||||| || |||||||||||||||||||||    
T  16096792 tgtataatggggtgtaggaataaagggtgttcatgtaacat 16096752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 34817831 - 34817871
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||| ||||| ||| |||||||||||||||||||||    
T  34817831 tgtacaatgaggtgtgtgaataaagggtgttcatgtaacat 34817871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 43490456 - 43490496
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  43490456 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 43490496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 3e-49; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 1197878 - 1198005
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  1197878 ttatttattaattttgttaggtctgcagcaatttaacctaatcttttcccgctcatttgctttattagggttgcaattatttaacctaacaaatttcatc 1197977  T
Q  394 taaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||||||||||| |||||||||||    
T  1197978 taaaaaatgcatcgcatcaatttcattc 1198005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 297 - 421
Target Start/End: Complemental strand, 27853773 - 27853648
Alignment:
Q  297 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa 396  Q
    ||||||||||||||||  |||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  27853773 tttattaattttgttatgtctgtagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaacctaacaaattccatctaa 27853674  T
Q  397 -aaaatgcatcgcaccaatttcattc 421  Q
     |||||||||||||||||||||||||    
T  27853673 aaaaatgcatcgcaccaatttcattc 27853648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 23828233 - 23828127
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23828233 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 23828134  T
Q  394 taaaaaa 400  Q
    |||||||    
T  23828133 taaaaaa 23828127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 292 - 421
Target Start/End: Complemental strand, 23838451 - 23838321
Alignment:
Q  292 ctttatttattaattttgttacctctgcagcaatttaacct-aattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattcc 390  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |    
T  23838451 ctttatttattaattttgttaggtctgcagcaatttaaccttaattttttcccgctcatttgctttattagttttgcaattatttaacctaacaaattgc 23838352  T
Q  391 atctaaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||||| ||||| ||||||||||||||    
T  23838351 atctaaaaaaagcatctcaccaatttcattc 23838321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 3459241 - 3459113
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  3459241 ttatttactaattttgttacgtctgcagcaatttaacataattttttcccgctcatttgctttattaggtttgcaattatttaatctaacaaatttcatc 3459142  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| ||||||||||||| |||||||||||    
T  3459141 taaaaaaatgcatcgcatcaatttcattc 3459113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 289 - 421
Target Start/End: Original strand, 23085855 - 23085989
Alignment:
Q  289 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 388  Q
    |||| |||||||||||||||||||  |||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||    
T  23085855 catcattatttattaattttgttaggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaataaatt 23085954  T
Q  389 ccatct--aaaaaatgcatcgcaccaatttcattc 421  Q
    ||||||  ||||||| |||||||||||||||||||    
T  23085955 ccatctaaaaaaaatacatcgcaccaatttcattc 23085989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 29580144 - 29580017
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| ||| ||||    
T  29580144 ttatttattaattttgttacgtatgcatcaatttaacctaattttttcccgctcatttgttttattaggtttgcaattatttaaactaacacatttcatc 29580045  T
Q  394 taaaaaatgcatcgcaccaatttcattc 421  Q
    |||||| |||||||||||||||||||||    
T  29580044 taaaaattgcatcgcaccaatttcattc 29580017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 290 - 421
Target Start/End: Complemental strand, 23960909 - 23960778
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||||    
T  23960909 atctttatttaataattttgttacgtctgcagcaatttaacctaattttttcca-ctcatttgctttattaggtttgtaattatttaacctaacaaattc 23960811  T
Q  390 catctaaaaaatg-catcgcaccaatttcattc 421  Q
    ||||||||||| | ||||||| |||||||||||    
T  23960810 catctaaaaaaagacatcgcatcaatttcattc 23960778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 294 - 420
Target Start/End: Original strand, 32062815 - 32062945
Alignment:
Q  294 ttatttattaattttgttacct--ctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattcca 391  Q
    |||||||||||||||||||| |  |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  32062815 ttatttattaattttgttacgttgctgcagcaatttaaactaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttca 32062914  T
Q  392 tct--aaaaaatgcatcgcaccaatttcatt 420  Q
    |||  ||||||||||| ||||||||||||||    
T  32062915 tctaaaaaaaatgcattgcaccaatttcatt 32062945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 37198404 - 37198276
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||  |||| ||||| |||||||||||||||||||||    
T  37198404 ttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattcggttttcaattgtttaacctaacaaattccatc 37198305  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| ||||||||| |||||||||||||||    
T  37198304 taaaaaaatgcattgcaccaatttcattc 37198276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 33198833 - 33198960
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||||||| ||||| |||  || | ||||||||||||||||||||||    
T  33198833 ttatttattaattttgttaggtctgcagcaatttaacctaatatttttccgctcatttgctgtattaggttaacagtgatttaacctaacaaattccatc 33198932  T
Q  394 taaaaaatgcatcgcaccaatttcattc 421  Q
    ||||||||||||||||||||||||||||    
T  33198933 taaaaaatgcatcgcaccaatttcattc 33198960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 35617681 - 35617811
Alignment:
Q  294 ttatttattaattttgttacctctgca-gcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||    
T  35617681 ttatttattaattttgttacgtctgcaagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaacaaattctat 35617780  T
Q  393 ct--aaaaaatgcatcgcaccaatttcattc 421  Q
    ||  |||||||||||||||| ||||||||||    
T  35617781 ctaaaaaaaatgcatcgcactaatttcattc 35617811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 37410178 - 37410051
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||||||||| |||| | |||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  37410178 ttatttattaattttattacgtttgcagcaatttaacttaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 37410079  T
Q  394 taaaaa-atgcatcgcaccaatttcatt 420  Q
    |||||| ||||||||||| |||||||||    
T  37410078 taaaaagatgcatcgcacaaatttcatt 37410051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 296 - 421
Target Start/End: Complemental strand, 39922192 - 39922066
Alignment:
Q  296 atttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatcta 395  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  39922192 atttattaactttgttacgtctgcagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaacaaattccatcta 39922093  T
Q  396 a-aaaatgcatcgcaccaatttcattc 421  Q
    | |||||| || |||||||||| ||||    
T  39922092 aaaaaatgtattgcaccaattttattc 39922066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 289 - 421
Target Start/End: Complemental strand, 40399605 - 40399472
Alignment:
Q  289 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 388  Q
    |||| |||| |||||||||| |||  | || ||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  40399605 catccttatgtattaatttttttatgtatgtagcaatttaacctaattttttcccgctcatttgttttattaggtttgtaattatttaacctaacaaatt 40399506  T
Q  389 ccatctaa-aaaatgcatcgcaccaatttcattc 421  Q
    |||||||| |||||||||||||||||||||||||    
T  40399505 ccatctaaaaaaatgcatcgcaccaatttcattc 40399472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 38111372 - 38111472
Alignment:
Q  322 caatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcatt 420  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  38111372 caatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacccaacaaattccatctgaaaaaatgcatcgcaccaatttcatt 38111471  T
Q  421 c 421  Q
    |    
T  38111472 c 38111472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 44429050 - 44429177
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||| || ||| |||||||||| ||||||| |||||||||||||||| ||  ||||| ||||||||||||||||||||||    
T  44429050 ttatttattaattttgttaggtctccaacaacttaacctaatattttccctctcatttgctttattaggtaagcaataatttaacctaacaaattccatc 44429149  T
Q  394 taaaaaatgcatcgcaccaatttcattc 421  Q
    ||||||||||||||||||||||||||||    
T  44429150 taaaaaatgcatcgcaccaatttcattc 44429177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 23831051 - 23830945
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  | ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  23831051 ttatttattaattttgttaggtgtgcagaaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattgcatc 23830952  T
Q  394 taaaaaa 400  Q
    |||||||    
T  23830951 taaaaaa 23830945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 23960687 - 23960560
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||| | ||||||| ||||||||| |||| |||||||||||||||||||||| ||||    
T  23960687 ttatttattaattttgttacgtctgcaacaatttaacttaatttttttctgctcatt-gctttattaggtttacaattatttaacctaacaaatttcatc 23960589  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| |||||||||||||||||||||||||    
T  23960588 taaaaaaatgcatcgcaccaatttcattc 23960560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 34947504 - 34947603
Alignment:
Q  322 caatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 421  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  34947504 caatttaacctaatttttttccgctcatttgctttattaggtttgaaattatttaacctaacaaatttcatctaaaaaatgcatcgcacaaatttcattc 34947603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 30439151 - 30439021
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttc---ccgctcatttgctttattatgtttgcaattatttaacctaacaaattcc 390  Q
    |||||||||||||||||||  |||||| |||||||| ||||||||||    | | ||||||||||||||| ||||||||||||||||||||||||||| |    
T  30439151 ttatttattaattttgttaggtctgcaacaatttaatctaattttttttttctgttcatttgctttattaggtttgcaattatttaacctaacaaatttc 30439052  T
Q  391 atctaaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||||||||||||||||||||| ||||    
T  30439051 atctaaaaaatgcatcgcaccaattttattc 30439021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 37198018 - 37197884
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattat--------gtttgcaattatttaacctaacaa 385  Q
    |||||||||||||||||||| |||||||||||||||||||||||||  |||||||||| ||||||||         ||||||||||||||||||||||||    
T  37198018 ttatttattaattttgttacgtctgcagcaatttaacctaattttt--ccgctcattttctttattaatttattaggtttgcaattatttaacctaacaa 37197921  T
Q  386 attccatctaa-aaaatgcatcgcaccaatttcattc 421  Q
    ||||||||||| |||||||||||||||||||||||||    
T  37197920 attccatctaaaaaaatgcatcgcaccaatttcattc 37197884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 37198220 - 37198113
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| |||||| ||    
T  37198220 ttattttttaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaacctaataaattctat 37198121  T
Q  393 ctaaaaaa 400  Q
    ||||||||    
T  37198120 ctaaaaaa 37198113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 294 - 416
Target Start/End: Complemental strand, 37197783 - 37197662
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||  | |  ||||||||||||||||||||| ||||    
T  37197783 ttatttattaattttgttacctctgcagcaatttaacctaa--ttttcctgctcatttgctttattaaatataaaattatttaacctaacaaatttcatc 37197686  T
Q  394 t-aaaaaatgcatcgcaccaattt 416  Q
    | ||||||||||| ||||||||||    
T  37197685 taaaaaaatgcatggcaccaattt 37197662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 13797442 - 13797570
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  | |||| ||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| ||     
T  13797442 ttatttattaattttgttaggtttgcatcaacttaacctagttttttcctgctcatttgctttattaggtttgcaattatttaacttaacaaattcaatt 13797541  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||| || |||||||||||||||    
T  13797542 taaaaaaatgtatggcaccaatttcattc 13797570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 2084876 - 2085005
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  | |||||||| |||| ||||| ||||||| |||||||||| ||||| ||| | | | ||||||||||||||||||||||    
T  2084876 ttatttattaattttgttaggtttgcagcaacttaatctaatattttccctctcatttgctgtattaggttagtagtaatttaacctaacaaattccatc 2084975  T
Q  394 ta--aaaaatgcatcgcaccaatttcattc 421  Q
    ||  ||||||||||||||||||||||||||    
T  2084976 taagaaaaatgcatcgcaccaatttcattc 2085005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 290 - 400
Target Start/End: Original strand, 37426112 - 37426222
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    |||||||||||||||||||||||| | |||||||| |||  |||||||||| | |||||||| |||||||| |||||||||| |||||| ||||||||||    
T  37426112 atctttatttattaattttgttacgtttgcagcaagttagtctaatttttttcagctcatttactttattaggtttgcaattgtttaacataacaaattc 37426211  T
Q  390 catctaaaaaa 400  Q
    |||||||||||    
T  37426212 catctaaaaaa 37426222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 44433629 - 44433757
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||| ||||||||||  |||||||||| || || |||| ||||||| | |||||||| ||||||||| ||| | ||||||||||||||||| ||||    
T  44433629 ttatttatcaattttgttaggtctgcagcaacttcacttaatattttccctcccatttgctgtattatgttagcagtaatttaacctaacaaatttcatc 44433728  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||||||||||||||||||    
T  44433729 taaaaaaatgcatcgcaccaatttcattc 44433757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 44429894 - 44430024
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||| ||||||||||  |||||||||| || || |||| ||||||| | |||||| | ||||||||| ||| | ||||||||||||||||| ||||    
T  44429894 ttatttatcaattttgttaggtctgcagcaacttcacttaatattttccctcccatttgttgtattatgttagcagtaatttaacctaacaaatttcatc 44429993  T
Q  394 t-aaaaaatgcatcgcaccaatttcattcat 423  Q
    | |||||||||||||||||||||||||||||    
T  44429994 taaaaaaatgcatcgcaccaatttcattcat 44430024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 302 - 420
Target Start/End: Original strand, 42045644 - 42045764
Alignment:
Q  302 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttatta--tgtttgcaattatttaacctaacaaattccatct-aaaa 398  Q
    |||||||||||| ||||||||||||||||||||||||||   |||||||| |||| |||   ||||||||||||||||||||||||||| ||||| ||||    
T  42045644 taattttgttacgtctgcagcaatttaacctaatttttt-ttgctcatttactttgttaagagtttgcaattatttaacctaacaaatttcatctaaaaa 42045742  T
Q  399 aatgcatcgcaccaatttcatt 420  Q
    |||||||| || ||||||||||    
T  42045743 aatgcatcacatcaatttcatt 42045764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 302 - 387
Target Start/End: Complemental strand, 18308343 - 18308258
Alignment:
Q  302 taattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 387  Q
    |||||||||||| ||||||  || |||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  18308343 taattttgttacatctgcaataacttaacctaattttttcccactcatttgctttattaggttcgcaattatttaacctaacaaat 18308258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 288 - 398
Target Start/End: Complemental strand, 43419138 - 43419032
Alignment:
Q  288 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 387  Q
    ||||| |||||||||||||||||||| |||||| ||| |||| |||| ||||||||||||||||||||||||| ||||   | |||||||||||||||||    
T  43419138 acatccttatttattaattttgttacatctgcatcaacttaatctaa-tttttcccgctcatttgctttattaggttt---actatttaacctaacaaat 43419043  T
Q  388 tccatctaaaa 398  Q
    | |||||||||    
T  43419042 ttcatctaaaa 43419032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 23838242 - 23838176
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttatta 360  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  23838242 ttatttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttatta 23838176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 33198603 - 33198729
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  || |||| ||||||||||||||||||    |||||||||| ||||| ||| ||| | ||||||||||||||||| ||||    
T  33198603 ttatttattaattttgttaggtcagcagtaatttaacctaatttttt--tactcatttgctgtattaggttagcactaatttaacctaacaaatttcatc 33198700  T
Q  394 taaaa-aatgcatcgcaccaatttcattc 421  Q
    ||||| |||||||||| | ||||||||||    
T  33198701 taaaacaatgcatcgcgcaaatttcattc 33198729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 604781 - 604652
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||||||| |||| | ||| ||| ||  || ||||||||||||| ||  ||| | ||||||||||||||||| ||||    
T  604781 ttatttattaattttgttaggtctgcagcaacttaatcgaatatttccctcct-atttgctttattaggtaagcagtaatttaacctaacaaatttcatc 604683  T
Q  394 taa-aaaatgcatcgcaccaatttcattcat 423  Q
    ||| ||||||||||||| |||||||||||||    
T  604682 taaaaaaatgcatcgcaacaatttcattcat 604652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 44430067 - 44430196
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 392  Q
    |||||||||||||||||||  |||||| ||| ||||| |||| ||||||| | |||||||||||||| ||  ||| | |||||||| ||| |||||||||    
T  44430067 ttatttattaattttgttaggtctgcaacaacttaacgtaatattttccctcccatttgctttattaggtaagcattaatttaacccaacaaaattccat 44430166  T
Q  393 c-taaaaaatgcatcgcaccaatttcattc 421  Q
    | | |||||||| |||||||||||||||||    
T  44430167 ctttaaaaatgcttcgcaccaatttcattc 44430196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 44430418 - 44430547
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 392  Q
    |||||||||||||||||||  |||||||||| |||||||| | ||||||| |||||||||||||| | ||  ||| | |||||||| ||| ||||| |||    
T  44430418 ttatttattaattttgttagatctgcagcaacttaacctactattttccctctcatttgctttatcaggtaagcagtaatttaacccaacaaaatttcat 44430517  T
Q  393 c-taaaaaatgcatcgcaccaatttcattc 421  Q
    | | |||||||| |||||||||||||||||    
T  44430518 cttgaaaaatgcttcgcaccaatttcattc 44430547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 44433802 - 44433931
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 392  Q
    |||||||||||||||||||  |||||| ||| ||||| |||| ||||||| | |||||||||||||| ||  ||| | |||||||| ||| |||||||||    
T  44433802 ttatttattaattttgttaggtctgcaacaacttaacgtaatattttccctcccatttgctttattaggtaagcattaatttaacccaacaaaattccat 44433901  T
Q  393 c-taaaaaatgcatcgcaccaatttcattc 421  Q
    | | |||||||| |||||||||||||||||    
T  44433902 ctttaaaaatgcttcgcaccaatttcattc 44433931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 373 - 421
Target Start/End: Original strand, 44014524 - 44014572
Alignment:
Q  373 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44014524 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 44014572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 297 - 416
Target Start/End: Complemental strand, 604606 - 604485
Alignment:
Q  297 tttattaattttgttacctctgcagcaatttaacctaattttttcccgctc-atttgctttattatgtttgcaattatttaacctaacaaattccatcta 395  Q
    ||||||||||||||||  |||| ||||| |||||||||| ||||||| ||| ||||||| ||||| ||| ||| | ||||||| ||||||||| ||||||    
T  604606 tttattaattttgttagatctgtagcaacttaacctaatattttccctctctatttgctgtattaggttagcagtaatttaacataacaaatttcatcta 604507  T
Q  396 aaa-aatgcatcgcaccaattt 416  Q
    ||| || ||||| |||||||||    
T  604506 aaacaaagcatcacaccaattt 604485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 349 - 421
Target Start/End: Complemental strand, 1276574 - 1276501
Alignment:
Q  349 tttgctttattatgtttgcaattatttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcattc 421  Q
    |||||||||||| |||||||||||||||||||||||||||  |||||||| ||| ||| |||||||||||||||    
T  1276574 tttgctttattaggtttgcaattatttaacctaacaaattgtatctaaaataattcattgcaccaatttcattc 1276501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 333 - 421
Target Start/End: Original strand, 3990184 - 3990273
Alignment:
Q  333 aattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||||||||||||||  ||  ||| ||||||||||||||||||||| ||||| ||||| |||||||| || |||||||||||||||    
T  3990184 aattttttcccgctcatttatttgtttaggtttgcaattatttaacctaataaattacatctaaaaaaatgaattgcaccaatttcattc 3990273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 44429224 - 44429353
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 392  Q
    |||||||||||||||||||  |||||| ||| |||||||||| |||| || |||||||||||||||| ||  ||| | |||||||| ||| ||||| |||    
T  44429224 ttatttattaattttgttaggtctgcaacaacttaacctaatatttttcctctcatttgctttattaggtaagcagtaatttaacccaacaaaatttcat 44429323  T
Q  393 c-taaaaaatgcatcgcaccaatttcattc 421  Q
    | | |||||||| ||||| |||||||||||    
T  44429324 cttgaaaaatgcttcgcatcaatttcattc 44429353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 44433976 - 44434105
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 392  Q
    |||||||||||||||||||  |||||| ||| ||||||||||  |||||| | |||||||||||||| ||  ||| | |||||||| ||| ||||| |||    
T  44433976 ttatttattaattttgttaggtctgcaacaacttaacctaatactttccctcccatttgctttattaggtaagcagtaatttaacccaacaaaatttcat 44434075  T
Q  393 c-taaaaaatgcatcgcaccaatttcattc 421  Q
    | | |||||||| |||||||||||||||||    
T  44434076 cttgaaaaatgcttcgcaccaatttcattc 44434105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 350
Target Start/End: Complemental strand, 39922016 - 39921960
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatt 350  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  39922016 ttatttattaattttgttacgtctgcaacaatttaacctaattttttcctgctcatt 39921960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 340
Target Start/End: Complemental strand, 37197834 - 37197788
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 340  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  37197834 ttatttattaattttgttacgtctgcagcaatttaacctaatttttt 37197788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 44430241 - 44430370
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac-aaattccat 392  Q
    |||||||||||||||||||  |||||| ||| |||||||||| |||| || | ||||| |||||||| ||  ||| | |||||||| ||| ||||| |||    
T  44430241 ttatttattaattttgttaggtctgcaacaacttaacctaatatttttcctcccatttactttattaggtaagcagtaatttaacccaacaaaatttcat 44430340  T
Q  393 c-taaaaaatgcatcgcaccaatttcattc 421  Q
    | | |||||||| |||||||||||||||||    
T  44430341 cttgaaaaatgcttcgcaccaatttcattc 44430370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 343
Target Start/End: Original strand, 34345139 - 34345193
Alignment:
Q  289 catctttatttattaattttgttacctctgcagcaatttaacctaattttttccc 343  Q
    |||| ||||||||||||||| |||  |||||||||||||||||||||||||||||    
T  34345139 catccttatttattaattttattaggtctgcagcaatttaacctaattttttccc 34345193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 340
Target Start/End: Complemental strand, 39922272 - 39922226
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaatttttt 340  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  39922272 ttatttattaattttgttacgtcttcagcaatttaacctaatttttt 39922226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 44434153 - 44434211
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttg 352  Q
    |||||||||||||||||||  |||||||||| |||||||||| ||||||| ||||||||    
T  44434153 ttatttattaattttgttagatctgcagcaacttaacctaatattttccctctcatttg 44434211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 421
Target Start/End: Original strand, 38111190 - 38111249
Alignment:
Q  363 tttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 421  Q
    ||||||||| |||||||||||||| ||||||| |||||||| ||||| ||||||||||||    
T  38111190 tttgcaattgtttaacctaacaaaatccatctaaaaaaatgtatcgcgccaatttcattc 38111249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 421
Target Start/End: Complemental strand, 604875 - 604825
Alignment:
Q  372 atttaacctaacaaattccatctaa-aaaatgcatcgcaccaatttcattc 421  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  604875 atttaacctaacaaatttcatctaaaaaaatgcatcgcacaaatttcattc 604825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 30912617 - 30912657
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  30912617 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 30912657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 35181561 - 35181521
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  35181561 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 35181521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 42699302 - 42699262
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  42699302 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 42699262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 605020 - 604969
Alignment:
Q  373 tttaacctaacaaattccatctaaaaaa-tgcatcgcaccaatttcattcat 423  Q
    |||||||||| |||||| |||||||||| || ||||||||||||||||||||    
T  605020 tttaacctaataaattcaatctaaaaaaatgtatcgcaccaatttcattcat 604969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 383
Target Start/End: Complemental strand, 604434 - 604344
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctc-atttgctttattatgtttgcaattatttaacctaac 383  Q
    |||||||||||||||||||  |||| ||||| |||||||||| ||||||| ||| ||||| | ||||| |||  || | ||||||||||||    
T  604434 ttatttattaattttgttagatctgtagcaacttaacctaatattttccctctctatttgttgtattaggttaacagtaatttaacctaac 604344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 423
Target Start/End: Complemental strand, 23831193 - 23831131
Alignment:
Q  362 gtttgcaattatttaacctaacaaattccatctaaa-aaatgcatcgcaccaatttcattcat 423  Q
    ||||||||||| |||||||| |||||| ||||||||  |||| ||| ||||||||||||||||    
T  23831193 gtttgcaattacttaacctatcaaattgcatctaaattaatgtatctcaccaatttcattcat 23831131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 11582811 - 11582771
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  11582811 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 11582771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 20148805 - 20148765
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||| ||||||| ||||||||||| |||||||||    
T  20148805 tgtacaatgggatgtatgaataaagggtgtttatgtaacat 20148765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 29705407 - 29705367
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  29705407 tgtacaatggggtgtagaaataaagggtgttcatgtaacat 29705367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 33630048 - 33630088
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||| ||||||||| |||||||||||| ||||||||    
T  33630048 tgtacaatgaggtgtatgattaaagggtgttcgtgtaacat 33630088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 34304833 - 34304793
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||| ||||||||||||||    
T  34304833 tgtacaatagggtgtatgattaaaggatgttcatgtaacat 34304793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 36743538 - 36743578
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  36743538 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 36743578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 42295240 - 42295200
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  42295240 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 42295200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 3e-49; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 293 - 423
Target Start/End: Complemental strand, 12442259 - 12442128
Alignment:
Q  293 tttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||    
T  12442259 tttatttattaattatgttaggtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaattatttaacctaacaaattacat 12442160  T
Q  393 cta-aaaaatgcatcgcaccaatttcattcat 423  Q
    ||| ||||||||||||||||||||||||||||    
T  12442159 ctacaaaaatgcatcgcaccaatttcattcat 12442128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 11313979 - 11314108
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttc-ccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  11313979 ttatttattaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaacctaaaaaattccat 11314078  T
Q  393 ct-aaaaaatgcatcgcaccaatttcattc 421  Q
    || |||||||||||||||||||||||||||    
T  11314079 ctaaaaaaatgcatcgcaccaatttcattc 11314108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 35159704 - 35159831
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||    
T  35159704 ttatttattaattttgttacgtctgcagcaatttaaccta-ttttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattttatc 35159802  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||||||||||||||||||    
T  35159803 taaaaaaatgcatcgcaccaatttcattc 35159831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 289 - 421
Target Start/End: Original strand, 7127554 - 7127687
Alignment:
Q  289 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 388  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||    
T  7127554 catccttatttattaattttgttacgtttgcagcaatttaacctaattttttcctgctcatttgcttgattaggtttgcaattatttaaactaacaaatt 7127653  T
Q  389 ccatct-aaaaaatgcatcgcaccaatttcattc 421  Q
    |||||| |||||||| ||||||||||||||||||    
T  7127654 ccatctaaaaaaatgtatcgcaccaatttcattc 7127687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 290 - 423
Target Start/End: Complemental strand, 7673329 - 7673193
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaatttttt-cccgctcatttgctttattatgtttgcaattatttaacctaacaaatt 388  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||| ||||||| |||||||||||||||||||||||||||    
T  7673329 atctttatttattaattttgttacgtctgcagcaatttaacctaatttttttcccgttcatttgttttattaggtttgcaattatttaacctaacaaatt 7673230  T
Q  389 ccatctaa--aaaatgcatcgcaccaatttcattcat 423  Q
     |||||||  ||||||||||||| |||||||||||||    
T  7673229 tcatctaaaaaaaatgcatcgcatcaatttcattcat 7673193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 16528600 - 16528728
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| ||| || |||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  16528600 ttatttattaattttgttacgtctacaacaatttaacctaacattttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattctatc 16528699  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||||||||||||||||||    
T  16528700 taaaaaaatgcatcgcaccaatttcattc 16528728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 26523265 - 26523137
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||    
T  26523265 ttatttattaattttgttatgtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttgatctaacaaattccatc 26523166  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| |||||||||||||||||||||||||    
T  26523165 taaaaaaatgcatcgcaccaatttcattc 26523137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 43395058 - 43394931
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  43395058 ttatttattaattt-gttacgtttgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 43394960  T
Q  394 taa-aaaatgcatcgcaccaatttcattc 421  Q
    ||| |||||||||||||||||||||||||    
T  43394959 taaaaaaatgcatcgcaccaatttcattc 43394931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 286 - 423
Target Start/End: Original strand, 19121899 - 19122037
Alignment:
Q  286 taacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaa 385  Q
    ||||||| |||||||||||||||||||  |||||| ||||||||||||||||||| |  |||||||||||||||| |||||||||| |||||||||||||    
T  19121899 taacatccttatttattaattttgttaggtctgcatcaatttaacctaatttttttcaactcatttgctttattaggtttgcaattgtttaacctaacaa 19121998  T
Q  386 attccatct-aaaaaatgcatcgcaccaatttcattcat 423  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  19121999 attctatctaaaaaaatgcatcgcaccaatttcattcat 19122037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 299 - 421
Target Start/End: Original strand, 11313807 - 11313930
Alignment:
Q  299 tattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaa 397  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| |||    
T  11313807 tattaattttgttacgtctgcaacaatttaacctaattttttcccgcacattttctttattaggtttgcaattatttaacctaacaaattccatctaaaa 11313906  T
Q  398 aaatgcatcgcaccaatttcattc 421  Q
    ||||| ||| ||||||||||||||    
T  11313907 aaatgtatcccaccaatttcattc 11313930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 24351577 - 24351450
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||||||||| |||  ||||||| |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  24351577 ttatttattaatttttttaggtctgcagtaatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatc 24351478  T
Q  394 taa-aaaatgcatcgcaccaatttcatt 420  Q
    ||| ||||||||||||||||||||||||    
T  24351477 taaaaaaatgcatcgcaccaatttcatt 24351450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 31487189 - 31487062
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||||| ||| ||| | ||||||||||||||||| ||||    
T  31487189 ttatttattaattttgttaggtctgcagtaatttaacctaatattttcccgctcatttgctgtattaggttagcagtaatttaacctaacaaatttcatc 31487090  T
Q  394 taaaaaatgcatcgcaccaatttcattc 421  Q
    ||||||||||||||||||||||||||||    
T  31487089 taaaaaatgcatcgcaccaatttcattc 31487062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 16529135 - 16529241
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||    
T  16529135 ttatttattaattttgttacgtctgcagcaatttaacctaattttttcgcgctcatttgctttattagatttgcaattatttaacgtaacaaattccatc 16529234  T
Q  394 taaaaaa 400  Q
    |||||||    
T  16529235 taaaaaa 16529241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 306 - 421
Target Start/End: Original strand, 16528793 - 16528909
Alignment:
Q  306 tttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgca 404  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||| |||||||| ||||||| ||    
T  16528793 tttgttacgtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaaatatttaacctaacaacttccatctaaaaaaattca 16528892  T
Q  405 tcgcaccaatttcattc 421  Q
    |||||||||||||||||    
T  16528893 tcgcaccaatttcattc 16528909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 16528959 - 16529087
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  || |||||||||| |||||| |||||||||||||||||||||||||||  |||    
T  16528959 ttatttattaattttgttacgtctgcagcaatttaacctaatttt--cctgctcatttgccttattaggtttgcaattatttaacctaacaaatttaatc 16529056  T
Q  394 t-aaaaaatgcatcgcaccaatttcattcat 423  Q
    | ||||||| |||||||||||||||||||||    
T  16529057 taaaaaaattcatcgcaccaatttcattcat 16529087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 290 - 420
Target Start/End: Original strand, 35159415 - 35159545
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||| |||| || |||||||||||| |||||||||||||||||||||| |||||    
T  35159415 atctttatttattaattttgttacgt-tgcaacaatttaacctaattttt-cccgttcttttgctttattaggtttgcaattatttaacctaaccaattc 35159512  T
Q  390 catct--aaaaaatgcatcgcaccaatttcatt 420  Q
    |||||  ||||||||||||||||||||||||||    
T  35159513 catctaaaaaaaatgcatcgcaccaatttcatt 35159545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 11313640 - 11313770
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    ||||||||||||||| |||| ||| || |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||    
T  11313640 ttatttattaatttttttacgtctacaacaatttaacctaattttttcccgctcattttctttattaggtttgcaattatttaacctaacaaattctatc 11313739  T
Q  394 t---aaaaaatgcatcgcaccaatttcattc 421  Q
    |   ||||||||||| ||| |||||||||||    
T  11313740 taaaaaaaaatgcattgcatcaatttcattc 11313770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 286 - 421
Target Start/End: Original strand, 19122235 - 19122371
Alignment:
Q  286 taacatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaa 385  Q
    ||||||| |||||||||||||||||||  | |||| ||||||||||||||||||| || |||||||||||||||| |||||||||| |||||||||||||    
T  19122235 taacatccttatttattaattttgttaggtttgcatcaatttaacctaatttttttccactcatttgctttattaggtttgcaattgtttaacctaacaa 19122334  T
Q  386 attccatct-aaaaaatgcatcgcaccaatttcattc 421  Q
    |||| |||| |||||||||||| || |||||||||||    
T  19122335 attctatctaaaaaaatgcatcacatcaatttcattc 19122371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 294 - 420
Target Start/End: Complemental strand, 41093175 - 41093047
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc--ca 391  Q
    |||||||||||||||||||  |||||| |||||||||||||||| |||| ||| ||||||||||||| ||||||||||||||||||||||||||||  |     
T  41093175 ttatttattaattttgttaggtctgcatcaatttaacctaatttattcctgctgatttgctttattaggtttgcaattatttaacctaacaaattcttcc 41093076  T
Q  392 tctaaaaaatgcatcgcaccaatttcatt 420  Q
    |  ||||||||||||||||||||||||||    
T  41093075 taaaaaaaatgcatcgcaccaatttcatt 41093047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 317 - 420
Target Start/End: Complemental strand, 24351001 - 24350897
Alignment:
Q  317 tgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaa-aaaatgcatcgcaccaatt 415  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  24351001 tgcagtaatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatt 24350902  T
Q  416 tcatt 420  Q
    |||||    
T  24350901 tcatt 24350897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 9488175 - 9488069
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||| | |||||||||||||  |||||||||||||||||||||||||| ||||    
T  9488175 ttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgtttatttgctttattagatttgcaattatttaacctaacaaatttcatc 9488076  T
Q  394 taaaaaa 400  Q
    |||||||    
T  9488075 taaaaaa 9488069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 10409525 - 10409655
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||| ||| | ||  |||||||||||||||||||||||||| |||     
T  10409525 ttatttattaattttgttacgtctccagtaatttaatctaattttttcccgctcattttcttcactagatttgcaattatttaacctaacaaatttcatt 10409624  T
Q  394 t-aaaaaatgcatcgcaccaatttcattcat 423  Q
    | ||||||||||||||| |||||||||||||    
T  10409625 taaaaaaatgcatcgcatcaatttcattcat 10409655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 292 - 421
Target Start/End: Complemental strand, 31486943 - 31486813
Alignment:
Q  292 ctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattcca 391  Q
    ||||||||||||||||| |||  |||||| |||||||||||||| |||||||| ||||||||| ||||| |||  || | ||||||||||||||||||||    
T  31486943 ctttatttattaatttttttaggtctgcaacaatttaacctaatattttcccgttcatttgctgtattaggttaacagtaatttaacctaacaaattcca 31486844  T
Q  392 tctaa-aaaatgcatcgcaccaatttcattc 421  Q
    ||||| |||||||||||||||||||||||||    
T  31486843 tctaaaaaaatgcatcgcaccaatttcattc 31486813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 41092995 - 41092869
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  |||||| |||||||||||||||| |||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||    
T  41092995 ttatttattaattttgttaggtctgcatcaatttaacctaatttattcc-gctcttttgctttattaggtttgcaattatttaacctaacaaatt-catc 41092898  T
Q  394 t-aaaaaatgcatcgcaccaatttcattc 421  Q
    | |||||||||||| | ||||||||||||    
T  41092897 taaaaaaatgcatcaccccaatttcattc 41092869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 14166289 - 14166159
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcc-cgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||||||||||||||||  ||||||| |||||||| |||||||||   |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  14166289 ttatttattaattttgttaggtctgcagtaatttaacttaatttttttttcagtcatttgctttattatgtttgcaattatttaacctaacaaattccat 14166190  T
Q  393 ct--aaaaaatgcatcgcaccaatttcattc 421  Q
     |  ||||||||||||||| |||||||||||    
T  14166189 ttaaaaaaaatgcatcgcatcaatttcattc 14166159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 16526197 - 16526304
Alignment:
Q  294 ttatttattaa-ttttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    ||||||||||| ||||||||| |||||| |||||||||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  16526197 ttatttattaaattttgttacgtctgcatcaatttaacctaattttttttcactcatttgctttattaggtttgcaattatttaacctaacaaattccat 16526296  T
Q  393 ctaaaaaa 400  Q
     |||||||    
T  16526297 ttaaaaaa 16526304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 294 - 421
Target Start/End: Original strand, 23138032 - 23138161
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||| ||||  ||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||| |||||||    
T  23138032 ttatttattaatttcgttaggtctgcagcattttaacctaattttttcc-gctcatttgctttattaggtttgcaattatataacgtaacaagttccatc 23138130  T
Q  394 t-aaaaaatgcatcg--caccaatttcattc 421  Q
    | |||||||||||||  ||||||||||||||    
T  23138131 taaaaaaatgcatcgcacaccaatttcattc 23138161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 13105284 - 13105150
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatta----tttaacctaacaaattc 389  Q
    |||||||||||||||||    ||||||||| |||||||||||||||| ||||||||| | ||||||| |||||||||||    ||||||||||||||||     
T  13105284 ttatttattaattttgtatggtctgcagcagtttaacctaatttttttccgctcattagttttattaggtttgcaattatttatttaacctaacaaattt 13105185  T
Q  390 catct-aaaaaatgcatcgcaccaatttcattcat 423  Q
    ||||| |||||||||||||||||||||||||||||    
T  13105184 catctaaaaaaatgcatcgcaccaatttcattcat 13105150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 294 - 387
Target Start/End: Complemental strand, 26523361 - 26523268
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 387  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  26523361 ttatttattaattttgttatgtctgcatcaatttaacctaattttttcccgcttatttgctttattaggtttgcaattatttgacctaacaaat 26523268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 13035309 - 13035177
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaatta----tttaacctaacaaattc 389  Q
    |||||||||||||||||    ||||||||||||||| |||||||||| ||||||||| | ||||||| |||||||||||    ||||||||||||||||     
T  13035309 ttatttattaattttgtatggtctgcagcaatttaatctaatttttttccgctcattagttttattaggtttgcaattatttatttaacctaacaaattt 13035210  T
Q  390 catct-aaaaaatgcatcgcaccaatttcattc 421  Q
    ||||| |||||||||||||||||||||||||||    
T  13035209 catctaaaaaaatgcatcgcaccaatttcattc 13035177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 323 - 421
Target Start/End: Complemental strand, 43395207 - 43395106
Alignment:
Q  323 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaa---atgcatcgcaccaatttcat 419  Q
    |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| ||||||   ||||||||||||||||||||    
T  43395207 aatttaacttgattttttcccgctcatttgctttattaggtttccaattatttaacctaacaaattacatgtaaaaaaatatgcatcgcaccaatttcat 43395108  T
Q  420 tc 421  Q
    ||    
T  43395107 tc 43395106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 16305348 - 16305476
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  | || |  ||||||| ||||||||  |||||||||||||||||||| |||||||||||||||| |||| ||||||||||    
T  16305348 ttatttattaattttgttaggtttgtaataatttaaactaatttt--cccgctcatttgctttattaggtttgcaattatttaatctaataaattccatc 16305445  T
Q  394 t-aaaaaatgcatcgcaccaatttcattcat 423  Q
    | ||||||||||  ||| |||||||||||||    
T  16305446 taaaaaaatgcacagcatcaatttcattcat 16305476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 315 - 378
Target Start/End: Original strand, 24326546 - 24326609
Alignment:
Q  315 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaac 378  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24326546 tctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24326609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 315 - 378
Target Start/End: Complemental strand, 24350795 - 24350732
Alignment:
Q  315 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaac 378  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24350795 tctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24350732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 315 - 378
Target Start/End: Complemental strand, 24351349 - 24351286
Alignment:
Q  315 tctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaac 378  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24351349 tctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24351286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 423
Target Start/End: Complemental strand, 38004744 - 38004643
Alignment:
Q  321 gcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcatt 420  Q
    |||||||||| ||||||||| | | |||||||||||| || ||||| |||||||||| |||| ||||| |||||||||||||||||||| ||||||||||    
T  38004744 gcaatttaacttaatttttttc-gttcatttgctttaataggtttgtaattatttaatctaataaatttcatctaaaaaatgcatcgcatcaatttcatt 38004646  T
Q  421 cat 423  Q
    |||    
T  38004645 cat 38004643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 421
Target Start/End: Complemental strand, 26523542 - 26523413
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc---gctcatttgctttattatgtttgcaattatttaacctaacaaattcc 390  Q
    |||||||||||||||||||  | |||| || |||||| |||||||||  |   ||||||||||||||||||  ||||||||||||||| ||||||||| |    
T  26523542 ttatttattaattttgttaggtgtgcaccattttaacttaattttttttctttgctcatttgctttattat--ttgcaattatttaacataacaaatttc 26523445  T
Q  391 atctaa-aaaatgcatcgcaccaatttcattc 421  Q
    |||||| |||||||||| || |||||||||||    
T  26523444 atctaaaaaaatgcatcacatcaatttcattc 26523413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 7673145 - 7673100
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttt 339  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  7673145 ttatttattaattttgttacgtctgcagcaatttaacctaattttt 7673100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 38109886 - 38109933
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttc 341  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  38109886 ttatttattaattttgttacgtctgcagcaatttaacctatttttttc 38109933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 38109946 - 38109997
Alignment:
Q  373 tttaacctaacaaattccatctaaaa-aatgcatcgcaccaatttcattcat 423  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  38109946 tttaatctaacaaattccatctaaaaaaatgcatcgcaccaatttcattcat 38109997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 22431585 - 22431634
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 343  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  22431585 ttatttattaattttgttaagtctgcagcaacttaacctaattttttccc 22431634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 33855098 - 33855138
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  33855098 tgtacaatggggtgtaggaataaagggtgttcatgtaacat 33855138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 38268880 - 38268924
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaatttt 338  Q
    |||||||||||||||||||  |||||| |||||||||||||||||    
T  38268880 ttatttattaattttgttaggtctgcaacaatttaacctaatttt 38268924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 24271164 - 24271122
Alignment:
Q  380 taacaaattccatctaaaaaa-tgcatcgcaccaatttcattc 421  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  24271164 taacaaattccatctaaaaaaatgcatcgcacccatttcattc 24271122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 421
Target Start/End: Original strand, 24325983 - 24326025
Alignment:
Q  380 taacaaattccatctaaaa-aatgcatcgcaccaatttcattc 421  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  24325983 taacaaattccatctaaaaaaatgcatcgcacccatttcattc 24326025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 24347786 - 24347744
Alignment:
Q  380 taacaaattccatctaaaaaa-tgcatcgcaccaatttcattc 421  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  24347786 taacaaattccatctaaaaaaatgcatcgcacccatttcattc 24347744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 2614704 - 2614744
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||| |||| || |||||||||||||||||||||    
T  2614704 tgtacaatgggatgtaggaataaagggtgttcatgtaacat 2614744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 7617178 - 7617138
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||| ||||| |||||||| |||||||||||||||||||||    
T  7617178 tgtataatggagtgtatgaataaagggtgttcatgtaacat 7617138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 423
Target Start/End: Complemental strand, 14165974 - 14165946
Alignment:
Q  395 aaaaaatgcatcgcaccaatttcattcat 423  Q
    |||||||||||||||||||||||||||||    
T  14165974 aaaaaatgcatcgcaccaatttcattcat 14165946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 18034027 - 18033987
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  18034027 tgtacaatggagtgtaggaataaagggtgttcatgtaacat 18033987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 22512350 - 22512310
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  22512350 tgtacaatggagtgtaggaataaagggtgttcatgtaacat 22512310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 25915042 - 25915082
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  25915042 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 25915082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 32473449 - 32473489
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||  ||||||||| |||||||||||||||||||||    
T  32473449 tgtacaataaggtgtatgattaaagggtgttcatgtaacat 32473489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 41334718 - 41334758
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||| |||| ||||||||| |||||||||||||||||||||    
T  41334718 tgtataatgaggtgtatgaataaagggtgttcatgtaacat 41334758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 294 - 417
Target Start/End: Complemental strand, 163908 - 163784
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  163908 ttatttattaattttgttaggtctgcagcaatttaacctactttttttccgctcatttgctttattaggtttgcaattatttaacctaataaattccatc 163809  T
Q  394 t-aaaaaatgcatcgcaccaatttc 417  Q
    | |||||||||||||||||||||||    
T  163808 tgaaaaaatgcatcgcaccaatttc 163784  T

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Target: scaffold0018; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 163270 - 163228
Alignment:
Q  297 tttattaattttgttacctctgcagcaatttaacctaattttt 339  Q
    ||||||||||||||||  |||||||||| ||||||||||||||    
T  163270 tttattaattttgttaagtctgcagcaacttaacctaattttt 163228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 294 - 407
Target Start/End: Complemental strand, 1640 - 1526
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaa-ttttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  1640 ttatttattaattttgttacgtctgcagcaatttaatctaaattttttcccactcatttgctttattaagtttgcaattatttaacctaataaattccat 1541  T
Q  393 ctaaaaaatgcatcg 407  Q
    |||||||||||||||    
T  1540 ctaaaaaatgcatcg 1526  T

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Target: scaffold0013 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 290 - 421
Target Start/End: Original strand, 102701 - 102831
Alignment:
Q  290 atctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattc 389  Q
    |||||||||||||||||||||||  | ||||  ||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  102701 atctttatttattaattttgttagatatgcaataatt--acctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaacaaattc 102798  T
Q  390 catct-aaaaaatgcatcgcaccaatttcattc 421  Q
    ||||| ||||||||||||||| |||||||||||    
T  102799 catctaaaaaaatgcatcgcatcaatttcattc 102831  T

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Target: scaffold0240 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 13092 - 13224
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatc 393  Q
    |||||||||||||| |||   |||||| ||||||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  13092 ttatttattaatttcgtttggtctgcaacaatttaacctaatttttttccgctcatttggtttattaggtttgccattatttaacctaacaaattccatc 13191  T
Q  394 taaa---aaatgcatcgcaccaatttcattcat 423  Q
    ||||   ||||||||||||||||||||||||||    
T  13192 taaaaacaaatgcatcgcaccaatttcattcat 13224  T

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Target: scaffold0240; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 13285 - 13379
Alignment:
Q  328 aacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  13285 aacctaattttttccctctcatttgctttattagggttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcgcaccaatttcattc 13379  T

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Target: scaffold0294 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 289 - 397
Target Start/End: Complemental strand, 12496 - 12386
Alignment:
Q  289 catctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaac--aaa 386  Q
    |||| |||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||  |||    
T  12496 catccttatttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacctaacaaaaa 12397  T
Q  387 ttccatctaaa 397  Q
    |||||||||||    
T  12396 ttccatctaaa 12386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 288 - 417
Target Start/End: Complemental strand, 14692 - 14562
Alignment:
Q  288 acatctttatttattaattttgttacctctgcagcaatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaat 387  Q
    ||||| |||||||||||||||||||| | |||| ||||||||| |||||| ||| |||||||||| |||||||  |||||||||||||||||||||||||    
T  14692 acatccttatttattaattttgttacatttgcatcaatttaacttaatttattctcgctcatttgttttattagatttgcaattatttaacctaacaaat 14593  T
Q  388 tccatct-aaaaaatgcatcgcaccaatttc 417  Q
    || |||| |||||||||||| || |||||||    
T  14592 tctatctaaaaaaatgcatcccatcaatttc 14562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 418
Target Start/End: Complemental strand, 196803 - 196680
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaat-tttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaattccat 392  Q
    |||||||||||||||||||  |   |||| |||||||||||| ||||| ||||||||||||| ||||| ||| |   | |||||||||||||||||||||    
T  196803 ttatttattaattttgttagat---cagccatttaacctaatattttttccgctcatttgctgtattaggttaggtgtaatttaacctaacaaattccat 196707  T
Q  393 ct-aaaaaatgcatcgcaccaatttca 418  Q
    || ||||||||||||||||||||||||    
T  196706 ctaaaaaaatgcatcgcaccaatttca 196680  T

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Target: scaffold0097 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 357 - 421
Target Start/End: Original strand, 12735 - 12800
Alignment:
Q  357 attatgtttgcaattatttaacctaacaaattccatctaaa-aaatgcatcgcaccaatttcattc 421  Q
    |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  12735 attaagtttgcaattatttaacctaacaaatttcatctaaataaatgcatcgcaccaatttcattc 12800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 373 - 421
Target Start/End: Complemental strand, 1152 - 1104
Alignment:
Q  373 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1152 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 1018 - 958
Alignment:
Q  326 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 386  Q
    |||||||||| ||||||| |||||||||||||||| |||  || | |||||||||||||||    
T  1018 ttaacctaatattttccctctcatttgctttattaggttatcactaatttaacctaacaaa 958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 373 - 421
Target Start/End: Complemental strand, 29915 - 29867
Alignment:
Q  373 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29915 tttaacctaacaaattccatctaaaaaatgcatcgcaccaatttcattc 29867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 29781 - 29721
Alignment:
Q  326 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 386  Q
    |||||||||| ||||||| |||||||||||||||| |||  || | |||||||||||||||    
T  29781 ttaacctaatattttccctctcatttgctttattaggttatcactaatttaacctaacaaa 29721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 421
Target Start/End: Original strand, 9064 - 9113
Alignment:
Q  373 tttaacctaacaaattccatct-aaaaaatgcatcgcaccaatttcattc 421  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9064 tttaacctaacaaattccatctaaaaaaatgcatcgcaccaatttcattc 9113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 9199 - 9259
Alignment:
Q  326 ttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaacaaa 386  Q
    |||||||||| ||||||| |||||||||||||||| |||  || | |||||||||||||||    
T  9199 ttaacctaatattttccctctcatttgctttattaggttatcactaatttaacctaacaaa 9259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 45774 - 45814
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  45774 tgtacaatagggtgtatgattaaagggtgttcatgtaacat 45814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 5415 - 5370
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttt 339  Q
    ||||||||||||||| |||  |||||||||| ||||||||||||||    
T  5415 ttatttattaattttattaggtctgcagcaacttaacctaattttt 5370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 5996 - 6045
Alignment:
Q  294 ttatttattaattttgttacctctgcagcaatttaacctaattttttccc 343  Q
    ||||||||||||||| |||  ||||| || ||||||||||||||||||||    
T  5996 ttatttattaattttattaggtctgcggcgatttaacctaattttttccc 6045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 11296 - 11256
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||||||||||| ||||| |||||||||| ||||    
T  11296 tgtacaatggggtgtatgaataaagtgtgttcatgtgacat 11256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 14243 - 14283
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  14243 tgtacaatggggtgtagaaataaagggtgttcatgtaacat 14283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 24571 - 24611
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  24571 tgtacaatggggtgtagaaataaagggtgttcatgtaacat 24611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 730 - 690
Alignment:
Q  251 tgtacaatggggtgtatgagtaaagggtgttcatgtaacat 291  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  730 tgtacaatgaggtgtaggaataaagggtgttcatgtaacat 690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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