View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17615_low_49 (Length: 269)

Name: NF17615_low_49
Description: NF17615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17615_low_49
NF17615_low_49
[»] chr4 (76 HSPs)
chr4 (15-250)||(722133-722368)
chr4 (15-250)||(754549-754784)
chr4 (50-213)||(8108967-8109130)
chr4 (50-213)||(43771137-43771300)
chr4 (50-213)||(24834589-24834752)
chr4 (50-211)||(50164406-50164567)
chr4 (50-213)||(40991595-40991758)
chr4 (50-212)||(39471168-39471330)
chr4 (54-215)||(34129404-34129565)
chr4 (52-213)||(47009202-47009363)
chr4 (50-213)||(20454551-20454712)
chr4 (50-212)||(49242181-49242343)
chr4 (71-213)||(52671862-52672004)
chr4 (77-213)||(24938421-24938557)
chr4 (81-213)||(26361314-26361446)
chr4 (90-212)||(22542432-22542554)
chr4 (50-175)||(49077260-49077385)
chr4 (56-180)||(50481584-50481708)
chr4 (50-197)||(33653511-33653658)
chr4 (80-191)||(5044568-5044679)
chr4 (50-177)||(20225383-20225508)
chr4 (50-201)||(29699500-29699650)
chr4 (54-186)||(10169678-10169808)
chr4 (64-204)||(25719127-25719268)
chr4 (90-213)||(31250888-31251012)
chr4 (92-212)||(43124521-43124641)
chr4 (50-202)||(48339357-48339509)
chr4 (90-213)||(45310954-45311077)
chr4 (50-148)||(47237812-47237910)
chr4 (90-213)||(19447182-19447306)
chr4 (94-213)||(38537519-38537641)
chr4 (50-146)||(42862494-42862590)
chr4 (54-157)||(50571879-50571982)
chr4 (52-213)||(13069954-13070115)
chr4 (50-163)||(46242000-46242111)
chr4 (65-213)||(30866937-30867086)
chr4 (97-186)||(46536295-46536384)
chr4 (77-186)||(50652369-50652477)
chr4 (53-137)||(22592318-22592402)
chr4 (60-172)||(49682838-49682950)
chr4 (84-211)||(19937180-19937307)
chr4 (50-185)||(46287452-46287587)
chr4 (81-213)||(18421837-18421967)
chr4 (128-209)||(37451023-37451104)
chr4 (57-213)||(39016681-39016838)
chr4 (75-213)||(51206079-51206218)
chr4 (82-212)||(1559921-1560051)
chr4 (140-213)||(11895138-11895212)
chr4 (66-172)||(41153245-41153351)
chr4 (140-202)||(45081759-45081821)
chr4 (52-174)||(13519960-13520084)
chr4 (65-197)||(16178610-16178742)
chr4 (106-213)||(5545645-5545753)
chr4 (50-148)||(37315574-37315669)
chr4 (130-202)||(52279276-52279348)
chr4 (50-169)||(33995985-33996104)
chr4 (50-204)||(43958162-43958313)
chr4 (50-124)||(1559812-1559886)
chr4 (77-191)||(38636375-38636489)
chr4 (66-182)||(2088701-2088818)
chr4 (49-122)||(27654487-27654560)
chr4 (50-213)||(2187819-2187982)
chr4 (78-186)||(2860916-2861024)
chr4 (138-213)||(19933482-19933557)
chr4 (148-194)||(19321901-19321947)
chr4 (64-122)||(21776942-21777000)
chr4 (58-104)||(40812056-40812102)
chr4 (50-104)||(51206161-51206215)
chr4 (147-213)||(51904621-51904687)
chr4 (84-168)||(3783412-3783496)
chr4 (48-100)||(24106766-24106818)
chr4 (166-210)||(24106772-24106816)
chr4 (166-210)||(27654488-27654532)
chr4 (152-211)||(34961762-34961819)
chr4 (152-204)||(37050643-37050695)
chr4 (50-86)||(53870996-53871032)
[»] chr5 (47 HSPs)
chr5 (54-213)||(28490728-28490887)
chr5 (50-197)||(10141998-10142143)
chr5 (54-210)||(30325883-30326039)
chr5 (58-213)||(34368379-34368534)
chr5 (62-213)||(41105576-41105727)
chr5 (52-197)||(17537124-17537269)
chr5 (78-213)||(5413740-5413878)
chr5 (69-181)||(39246638-39246750)
chr5 (62-197)||(25710494-25710629)
chr5 (50-213)||(28611784-28611947)
chr5 (50-213)||(37455360-37455526)
chr5 (50-212)||(27592459-27592621)
chr5 (53-209)||(34384701-34384857)
chr5 (58-204)||(41330408-41330554)
chr5 (52-197)||(43405406-43405551)
chr5 (62-191)||(28434846-28434973)
chr5 (100-192)||(14553573-14553665)
chr5 (50-213)||(40971458-40971622)
chr5 (54-212)||(1923559-1923717)
chr5 (59-212)||(36337894-36338050)
chr5 (95-197)||(28090251-28090353)
chr5 (91-188)||(34479982-34480079)
chr5 (50-213)||(17434856-17435016)
chr5 (50-213)||(42224596-42224760)
chr5 (50-204)||(28223791-28223945)
chr5 (62-191)||(10950109-10950238)
chr5 (94-204)||(25919266-25919376)
chr5 (50-186)||(2525585-2525721)
chr5 (106-194)||(10666713-10666801)
chr5 (66-213)||(17568707-17568855)
chr5 (56-180)||(25630824-25630948)
chr5 (58-213)||(32401136-32401292)
chr5 (54-213)||(4714764-4714923)
chr5 (90-172)||(31885878-31885960)
chr5 (155-204)||(2935445-2935494)
chr5 (148-213)||(12076068-12076133)
chr5 (49-121)||(32309490-32309562)
chr5 (146-213)||(5465658-5465725)
chr5 (50-116)||(32050413-32050479)
chr5 (49-110)||(1649560-1649621)
chr5 (69-137)||(10253164-10253232)
chr5 (166-213)||(4959286-4959333)
chr5 (77-191)||(24990924-24991039)
chr5 (147-210)||(25002014-25002077)
chr5 (157-210)||(1649561-1649614)
chr5 (59-144)||(43541871-43541956)
chr5 (50-122)||(6263894-6263966)
[»] chr3 (68 HSPs)
chr3 (50-213)||(41451901-41452064)
chr3 (50-213)||(24734716-24734879)
chr3 (50-212)||(28529264-28529424)
chr3 (50-212)||(20493452-20493614)
chr3 (50-213)||(52123962-52124125)
chr3 (50-213)||(37776709-37776872)
chr3 (54-209)||(20791311-20791466)
chr3 (50-191)||(10948588-10948729)
chr3 (50-197)||(46450078-46450224)
chr3 (50-213)||(5452068-5452229)
chr3 (77-200)||(18427169-18427292)
chr3 (64-213)||(14236044-14236193)
chr3 (50-202)||(8824996-8825148)
chr3 (50-213)||(27243056-27243220)
chr3 (50-209)||(46160960-46161117)
chr3 (54-170)||(26310495-26310611)
chr3 (50-210)||(50156669-50156827)
chr3 (54-202)||(41707457-41707604)
chr3 (90-204)||(29588748-29588862)
chr3 (70-204)||(38414678-38414812)
chr3 (50-197)||(55452037-55452182)
chr3 (53-208)||(45515508-45515661)
chr3 (52-213)||(15790376-15790536)
chr3 (50-211)||(29755511-29755672)
chr3 (50-213)||(37600135-37600299)
chr3 (50-189)||(22604571-22604710)
chr3 (50-204)||(48351447-48351601)
chr3 (90-202)||(2419481-2419593)
chr3 (50-186)||(40715895-40716031)
chr3 (50-204)||(46575959-46576114)
chr3 (108-186)||(752461-752539)
chr3 (68-211)||(43016440-43016585)
chr3 (90-187)||(19345032-19345129)
chr3 (129-194)||(24429050-24429115)
chr3 (69-197)||(138793-138921)
chr3 (69-197)||(41387591-41387719)
chr3 (106-213)||(44844048-44844156)
chr3 (108-186)||(742025-742103)
chr3 (50-148)||(46237117-46237215)
chr3 (78-172)||(49072044-49072138)
chr3 (57-213)||(24748915-24749072)
chr3 (129-202)||(29388611-29388684)
chr3 (74-191)||(37285318-37285435)
chr3 (50-213)||(40702128-40702289)
chr3 (53-204)||(2009009-2009159)
chr3 (65-148)||(43657067-43657150)
chr3 (106-212)||(38138589-38138695)
chr3 (65-213)||(54140898-54141047)
chr3 (106-185)||(20586885-20586964)
chr3 (50-105)||(52951474-52951529)
chr3 (50-124)||(29389108-29389182)
chr3 (106-212)||(39186031-39186137)
chr3 (146-213)||(49418425-49418493)
chr3 (166-213)||(27243053-27243100)
chr3 (50-172)||(50661568-50661691)
chr3 (50-211)||(10769732-10769894)
chr3 (49-118)||(49720103-49720172)
chr3 (50-213)||(13809093-13809256)
chr3 (50-85)||(18722590-18722625)
chr3 (58-209)||(36750955-36751106)
chr3 (49-119)||(7640695-7640765)
chr3 (50-104)||(24748918-24748972)
chr3 (69-147)||(30624661-30624739)
chr3 (171-213)||(34918405-34918447)
chr3 (80-124)||(18722535-18722579)
chr3 (165-197)||(28576111-28576143)
chr3 (166-210)||(29235658-29235702)
chr3 (166-210)||(54187055-54187099)
[»] chr6 (43 HSPs)
chr6 (50-213)||(34905347-34905510)
chr6 (50-204)||(5106309-5106463)
chr6 (52-197)||(445831-445976)
chr6 (50-212)||(10133165-10133327)
chr6 (50-213)||(1392641-1392801)
chr6 (50-197)||(31116146-31116293)
chr6 (54-204)||(21987307-21987457)
chr6 (50-197)||(32122806-32122953)
chr6 (50-213)||(12753766-12753929)
chr6 (94-213)||(16851979-16852098)
chr6 (91-213)||(16187440-16187558)
chr6 (91-213)||(16187658-16187776)
chr6 (50-197)||(2675906-2676053)
chr6 (84-211)||(32112725-32112852)
chr6 (82-204)||(12780774-12780896)
chr6 (119-211)||(8441857-8441949)
chr6 (119-211)||(8450661-8450753)
chr6 (68-204)||(17144686-17144822)
chr6 (50-213)||(19090220-19090384)
chr6 (81-204)||(12784954-12785077)
chr6 (63-213)||(16436089-16436238)
chr6 (50-148)||(35128794-35128892)
chr6 (65-213)||(19737440-19737589)
chr6 (50-210)||(13001703-13001863)
chr6 (81-213)||(32598954-32599086)
chr6 (58-212)||(31443978-31444132)
chr6 (54-138)||(2931576-2931660)
chr6 (63-147)||(4595766-4595850)
chr6 (66-137)||(6531380-6531451)
chr6 (65-122)||(373425-373482)
chr6 (49-122)||(25326841-25326914)
chr6 (49-122)||(26159376-26159449)
chr6 (51-103)||(8441953-8442005)
chr6 (51-103)||(8450757-8450809)
chr6 (62-126)||(12327298-12327362)
chr6 (48-203)||(29610252-29610408)
chr6 (119-174)||(14211722-14211777)
chr6 (149-211)||(32439486-32439548)
chr6 (154-195)||(20128798-20128839)
chr6 (154-195)||(22204031-22204072)
chr6 (168-213)||(34231873-34231918)
chr6 (150-210)||(3061942-3062002)
chr6 (49-85)||(29610244-29610280)
[»] chr7 (71 HSPs)
chr7 (50-213)||(27888293-27888456)
chr7 (50-212)||(22189950-22190112)
chr7 (50-213)||(27949284-27949447)
chr7 (50-204)||(14795142-14795296)
chr7 (50-204)||(15242134-15242288)
chr7 (50-212)||(11824082-11824242)
chr7 (58-204)||(7775019-7775164)
chr7 (50-213)||(6442176-6442339)
chr7 (50-197)||(12263458-12263605)
chr7 (50-213)||(32212876-32213038)
chr7 (54-204)||(39254098-39254248)
chr7 (50-179)||(31502504-31502633)
chr7 (50-213)||(32205090-32205250)
chr7 (50-213)||(33008115-33008275)
chr7 (50-212)||(6580009-6580174)
chr7 (80-213)||(11692220-11692353)
chr7 (50-203)||(19422850-19423003)
chr7 (56-212)||(44350809-44350965)
chr7 (50-213)||(46517304-46517465)
chr7 (50-213)||(48374445-48374606)
chr7 (50-213)||(7459354-7459517)
chr7 (94-213)||(25686841-25686960)
chr7 (105-204)||(27320440-27320539)
chr7 (50-172)||(25092708-25092830)
chr7 (50-156)||(44510999-44511105)
chr7 (54-200)||(32178823-32178966)
chr7 (49-213)||(24539128-24539293)
chr7 (50-138)||(8073369-8073457)
chr7 (50-213)||(13919791-13919955)
chr7 (64-213)||(17749719-17749869)
chr7 (68-213)||(26703445-26703591)
chr7 (65-213)||(45909481-45909631)
chr7 (137-197)||(31874114-31874174)
chr7 (58-174)||(36845567-36845682)
chr7 (151-206)||(7774956-7775011)
chr7 (57-204)||(32605350-32605496)
chr7 (55-149)||(12271002-12271095)
chr7 (50-148)||(22786162-22786260)
chr7 (58-183)||(1688002-1688127)
chr7 (129-210)||(31628089-31628170)
chr7 (107-192)||(31731282-31731367)
chr7 (144-213)||(36845497-36845566)
chr7 (66-213)||(14759670-14759818)
chr7 (88-197)||(23564053-23564166)
chr7 (50-213)||(25428484-25428648)
chr7 (65-148)||(17354598-17354681)
chr7 (70-149)||(19494409-19494488)
chr7 (50-204)||(10933980-10934134)
chr7 (147-197)||(12167315-12167365)
chr7 (70-211)||(17813789-17813923)
chr7 (84-213)||(46994368-46994498)
chr7 (52-174)||(9648935-9649059)
chr7 (114-191)||(31759838-31759915)
chr7 (69-113)||(31874061-31874105)
chr7 (134-211)||(2911856-2911934)
chr7 (57-171)||(32055594-32055708)
chr7 (124-186)||(36105522-36105584)
chr7 (159-213)||(38065332-38065386)
chr7 (144-213)||(30742546-30742615)
chr7 (52-104)||(42466238-42466288)
chr7 (50-101)||(31959975-31960026)
chr7 (153-207)||(1316387-1316440)
chr7 (50-104)||(2520644-2520698)
chr7 (166-212)||(26190031-26190077)
chr7 (50-103)||(20954798-20954851)
chr7 (49-118)||(37489912-37489981)
chr7 (50-87)||(42863566-42863603)
chr7 (164-204)||(2291916-2291956)
chr7 (74-138)||(10477272-10477336)
chr7 (134-213)||(20954774-20954854)
chr7 (166-210)||(24539248-24539292)
[»] chr2 (64 HSPs)
chr2 (54-213)||(6980126-6980285)
chr2 (50-213)||(12989202-12989365)
chr2 (50-213)||(26767767-26767930)
chr2 (50-212)||(45554578-45554732)
chr2 (52-213)||(9470094-9470254)
chr2 (54-213)||(38464178-38464337)
chr2 (52-198)||(10981531-10981677)
chr2 (65-212)||(44274260-44274407)
chr2 (50-196)||(11539434-11539583)
chr2 (50-194)||(36471863-36472007)
chr2 (53-212)||(19639107-19639266)
chr2 (53-212)||(19837700-19837859)
chr2 (50-197)||(3804595-3804743)
chr2 (50-213)||(34142145-34142308)
chr2 (50-201)||(37652263-37652414)
chr2 (50-191)||(12098894-12099036)
chr2 (78-211)||(35316409-35316542)
chr2 (108-204)||(15884498-15884594)
chr2 (50-185)||(17188078-17188211)
chr2 (50-173)||(18511255-18511378)
chr2 (50-213)||(32856141-32856308)
chr2 (50-171)||(16719478-16719599)
chr2 (84-211)||(472171-472298)
chr2 (50-196)||(30718350-30718495)
chr2 (50-211)||(42182900-42183062)
chr2 (50-197)||(4602890-4603036)
chr2 (132-213)||(14489545-14489626)
chr2 (65-213)||(28898042-28898191)
chr2 (66-213)||(4964678-4964826)
chr2 (50-213)||(2122806-2122969)
chr2 (107-178)||(7919311-7919382)
chr2 (54-187)||(43414369-43414503)
chr2 (50-150)||(2476547-2476645)
chr2 (58-186)||(32701489-32701617)
chr2 (134-213)||(4552846-4552925)
chr2 (56-186)||(25730472-25730602)
chr2 (84-190)||(27494480-27494586)
chr2 (50-191)||(24497203-24497344)
chr2 (84-212)||(25238284-25238413)
chr2 (50-122)||(1107049-1107121)
chr2 (78-212)||(6315697-6315832)
chr2 (50-197)||(33678138-33678284)
chr2 (50-148)||(8009524-8009622)
chr2 (52-122)||(43400146-43400216)
chr2 (54-172)||(45270603-45270720)
chr2 (78-214)||(24895271-24895408)
chr2 (50-213)||(15508925-15509089)
chr2 (50-212)||(37228509-37228673)
chr2 (68-213)||(1110227-1110373)
chr2 (57-122)||(10339784-10339849)
chr2 (49-213)||(19193508-19193673)
chr2 (85-186)||(30849283-30849384)
chr2 (50-122)||(31395542-31395614)
chr2 (147-194)||(17460974-17461021)
chr2 (147-213)||(6420460-6420526)
chr2 (167-213)||(15508922-15508968)
chr2 (50-112)||(25666700-25666762)
chr2 (147-213)||(30706378-30706444)
chr2 (50-104)||(37228617-37228671)
chr2 (64-122)||(41805873-41805931)
chr2 (167-213)||(42579662-42579708)
chr2 (153-194)||(80403-80444)
chr2 (50-103)||(25238286-25238339)
chr2 (49-122)||(37077970-37078043)
[»] chr8 (51 HSPs)
chr8 (50-212)||(24055932-24056094)
chr8 (50-213)||(16983405-16983568)
chr8 (54-197)||(32072112-32072255)
chr8 (50-204)||(28413885-28414038)
chr8 (56-201)||(9952775-9952920)
chr8 (53-213)||(34861198-34861351)
chr8 (52-204)||(1977188-1977340)
chr8 (50-197)||(14236349-14236496)
chr8 (50-212)||(8903863-8904025)
chr8 (62-204)||(17499248-17499390)
chr8 (50-213)||(5979891-5980053)
chr8 (50-213)||(35151735-35151898)
chr8 (63-212)||(6098784-6098931)
chr8 (50-197)||(8914782-8914929)
chr8 (50-197)||(41727441-41727588)
chr8 (50-209)||(35689491-35689651)
chr8 (64-213)||(13407329-13407479)
chr8 (62-212)||(36804846-36804996)
chr8 (50-191)||(43506549-43506687)
chr8 (50-211)||(31301126-31301286)
chr8 (52-204)||(7493357-7493514)
chr8 (49-204)||(11962697-11962851)
chr8 (83-202)||(13214539-13214658)
chr8 (54-209)||(23685146-23685297)
chr8 (70-197)||(35797426-35797551)
chr8 (63-194)||(17741552-17741683)
chr8 (64-212)||(45246459-45246607)
chr8 (69-203)||(6387591-6387726)
chr8 (106-213)||(9193449-9193556)
chr8 (52-161)||(1961295-1961404)
chr8 (78-212)||(4674949-4675079)
chr8 (86-164)||(9192048-9192126)
chr8 (100-213)||(34952504-34952617)
chr8 (50-202)||(4319750-4319902)
chr8 (50-157)||(17716864-17716969)
chr8 (50-118)||(39023441-39023509)
chr8 (136-210)||(5727328-5727403)
chr8 (61-144)||(28211961-28212044)
chr8 (153-191)||(5095788-5095826)
chr8 (106-172)||(35819199-35819265)
chr8 (49-123)||(45524972-45525046)
chr8 (149-210)||(28700564-28700625)
chr8 (58-122)||(7599519-7599583)
chr8 (153-213)||(17915926-17915986)
chr8 (52-170)||(3099691-3099809)
chr8 (94-172)||(26637588-26637666)
chr8 (160-213)||(8671070-8671123)
chr8 (170-211)||(11574160-11574201)
chr8 (55-104)||(13856510-13856559)
chr8 (51-100)||(35689602-35689651)
chr8 (90-197)||(9453513-9453621)
[»] chr1 (79 HSPs)
chr1 (50-213)||(10659775-10659938)
chr1 (50-213)||(8899025-8899188)
chr1 (50-213)||(26980268-26980431)
chr1 (50-213)||(6133631-6133793)
chr1 (62-213)||(32211790-32211941)
chr1 (54-204)||(19101616-19101766)
chr1 (50-197)||(41958096-41958241)
chr1 (50-213)||(28218052-28218217)
chr1 (79-213)||(30678917-30679051)
chr1 (55-201)||(33193066-33193212)
chr1 (50-213)||(8741229-8741394)
chr1 (54-204)||(15523225-15523371)
chr1 (54-204)||(15531219-15531365)
chr1 (50-213)||(11987637-11987800)
chr1 (62-197)||(29673498-29673633)
chr1 (50-211)||(2225237-2225396)
chr1 (50-211)||(25543351-25543511)
chr1 (55-204)||(41948161-41948310)
chr1 (54-213)||(27570240-27570399)
chr1 (54-209)||(22540383-22540534)
chr1 (49-213)||(51732289-51732450)
chr1 (50-182)||(3872671-3872802)
chr1 (55-197)||(44271934-44272076)
chr1 (58-204)||(37552966-37553110)
chr1 (63-212)||(15928579-15928726)
chr1 (50-197)||(35336877-35337018)
chr1 (50-213)||(11135750-11135914)
chr1 (50-213)||(931385-931548)
chr1 (50-213)||(32848588-32848752)
chr1 (91-194)||(31866368-31866470)
chr1 (57-213)||(14094006-14094163)
chr1 (99-204)||(15468280-15468385)
chr1 (49-122)||(18157048-18157121)
chr1 (52-213)||(33059899-33060059)
chr1 (50-213)||(11430452-11430615)
chr1 (128-204)||(12767343-12767419)
chr1 (50-213)||(41095614-41095778)
chr1 (60-170)||(49730885-49730995)
chr1 (49-213)||(13114675-13114840)
chr1 (106-203)||(33114038-33114135)
chr1 (98-195)||(45179270-45179367)
chr1 (66-213)||(50424871-50425019)
chr1 (153-212)||(39974207-39974266)
chr1 (77-172)||(50539162-50539257)
chr1 (50-148)||(41918006-41918104)
chr1 (145-213)||(16948535-16948603)
chr1 (69-212)||(1093076-1093223)
chr1 (48-122)||(14341018-14341092)
chr1 (50-104)||(39039470-39039524)
chr1 (50-148)||(44739129-44739227)
chr1 (50-171)||(743430-743551)
chr1 (68-204)||(36566925-36567055)
chr1 (65-211)||(28109894-28110040)
chr1 (70-177)||(37525560-37525667)
chr1 (50-104)||(13388345-13388399)
chr1 (159-209)||(21466630-21466680)
chr1 (74-180)||(39499430-39499535)
chr1 (50-122)||(4578674-4578744)
chr1 (57-202)||(28941840-28941985)
chr1 (172-213)||(39019700-39019741)
chr1 (53-165)||(46335108-46335223)
chr1 (98-174)||(6325858-6325933)
chr1 (166-210)||(28274797-28274841)
chr1 (159-210)||(15661012-15661063)
chr1 (49-204)||(15906421-15906575)
chr1 (49-100)||(28274796-28274847)
chr1 (153-212)||(32848695-32848754)
chr1 (166-212)||(26980387-26980433)
chr1 (143-197)||(29673678-29673732)
chr1 (50-104)||(41095617-41095671)
chr1 (54-103)||(21466687-21466736)
chr1 (57-122)||(21977205-21977270)
chr1 (69-122)||(24911493-24911546)
chr1 (50-187)||(31074727-31074863)
chr1 (69-122)||(43851132-43851185)
chr1 (120-185)||(47644331-47644396)
chr1 (161-213)||(18157159-18157211)
chr1 (78-146)||(24436540-24436608)
chr1 (153-205)||(28941838-28941890)
[»] scaffold0018 (1 HSPs)
scaffold0018 (74-213)||(27847-27986)
[»] scaffold0543 (1 HSPs)
scaffold0543 (62-176)||(9687-9801)
[»] scaffold0492 (1 HSPs)
scaffold0492 (62-176)||(11233-11347)
[»] scaffold0016 (1 HSPs)
scaffold0016 (77-213)||(204714-204850)
[»] scaffold0204 (1 HSPs)
scaffold0204 (65-202)||(26879-27016)
[»] scaffold0838 (1 HSPs)
scaffold0838 (54-165)||(2237-2346)
[»] scaffold0832 (1 HSPs)
scaffold0832 (54-165)||(2268-2377)
[»] scaffold0005 (2 HSPs)
scaffold0005 (166-210)||(296847-296891)
scaffold0005 (57-119)||(296854-296916)
[»] scaffold0194 (1 HSPs)
scaffold0194 (141-212)||(8418-8489)
[»] scaffold0057 (1 HSPs)
scaffold0057 (78-192)||(42953-43068)
[»] scaffold0008 (1 HSPs)
scaffold0008 (164-201)||(121218-121255)
[»] scaffold0099 (1 HSPs)
scaffold0099 (90-146)||(27364-27420)


Alignment Details
Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 722133 - 722368
Alignment:
Q  15 tataacgaagtttgacccaaaacattcgaaagttgacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtccc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  722133 tataacgaagtttgacccaaaacattcgaaagttgacactcatctttcaacactctctctagcactcacttttttattggatgaaatcaaagtatgtccc 722232  T
Q  115 accactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgcc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  722233 accactttgtgtaagttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgtc 722332  T
Q  215 atctctgccctttaattattactctctccatcccta 250  Q
    |||||| |||||||||||||||||||||||||||||    
T  722333 atctctaccctttaattattactctctccatcccta 722368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 754784 - 754549
Alignment:
Q  15 tataacgaagtttgacccaaaacattcgaaagttgacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtccc 114  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||    
T  754784 tataacgaagtttgacccaaaacattcgaaagttgacacttacttttcaacactttctctaacactcacttttttattggatgaactcaaagtatgtccc 754685  T
Q  115 accactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgcc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  754684 accactttgtgtaagttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgcc 754585  T
Q  215 atctctgccctttaattattactctctccatcccta 250  Q
    |||||| |||||||||||||||||||||||||||||    
T  754584 atctctaccctttaattattactctctccatcccta 754549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 8108967 - 8109130
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||| ||||||||||| | |||||||  |||||||||| ||||||||||    
T  8108967 acactcacttttcaacactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccactaatttgtgtttgttcaattttcaaagtgtaga 8109066  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  8109067 cccacaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgttgc 8109130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 43771137 - 43771300
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| |||||||||||||  ||||||| ||| ||||||||||||||| ||||||||||||||| |||||  |||||||||| ||||||||||    
T  43771137 acactcacttttgaacactctctctatgactcactcttttattggatgaaatcaatgtatgtcccaccactctgtgtgggttcaattttcaaagtgtaga 43771236  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| |||||||||||||||||||||||||||| |||| |||||||||||| || |||||    
T  43771237 cccacaatgatttaaaccaataagagagtgagtattaaagagggtgttcaaaagagagcgttgc 43771300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 24834589 - 24834752
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||  |||||||||||| | ||||| |||| |||||||| |||||| ||||||||||||| |||||||  |||||||||| ||||||||||    
T  24834589 acactcactttttgacactctctctaacgctcacatttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaagtgtaga 24834688  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| ||||||||    
T  24834689 cccacaataatttaaaccaataagagagtgactattagagagagagtttaaaagagagtgttgc 24834752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 50 - 211
Target Start/End: Original strand, 50164406 - 50164567
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| ||||||||||||||||||||||  || ||||||| ||||||| |||| |||||||| ||||||   |||||||||| ||||||||||    
T  50164406 acactcactttttaacactctctctagcactcactcatttattggataaaatcaatgtatctcccaccattttgtgggggttcaattttcaaagtgtaga 50164505  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgtt 211  Q
    | |||||| |||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  50164506 ctcacaatgatttaaaccaataagaaagtgagcattagagagagtgttcaaaagatagtgtt 50164567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 40991758 - 40991595
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||  ||||||||||| | |||| |  |  | |||| | |||||||||    
T  40991758 acactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatatatgtcccaccccattgtattggcactatttctgaagtgtaga 40991659  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  40991658 cccacaatgatttaaaccaataaaagagtgagtatcagagagagtgttcaaaaaaaagtgttgc 40991595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 50 - 212
Target Start/End: Original strand, 39471168 - 39471330
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| || ||||||| || |||  ||| ||| ||| ||||||||||| |||||||||||||||||||||  ||||||| || ||||||||||    
T  39471168 acactcacttttaaatactctctttaacaccaactcttttattagatgaaatcaatgtatgtcccaccactttgtgttggttcaatcttcaaagtgtaga 39471267  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||| |||||| |||||||    
T  39471268 cccacaatgatttaaaccaataagagagtgagtattagagagaatgtttaaaagagagtgttg 39471330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 34129565 - 34129404
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||||| ||||||||||||||||||| ||  ||||||||| ||||| |||| ||||||||||||||||  |||||||||| ||||||| ||| ||    
T  34129565 tcacttttcaaaactctctctagcactcactcttctattggatgagatcaatgtatatcccaccactttgtgtgtgttcaattttcaaagtgtggactca 34129466  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgcca 215  Q
    ||||  ||||||||||||| |||||||||||||||||  ||||||| |||| ||||||||||    
T  34129465 caatggtttaaaccaataaaagagtgagtattagagattgtgttcagaagagagtgttgcca 34129404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 47009202 - 47009363
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacc 151  Q
    ||||| ||||||||||||| ||||||||||||| ||| ||||||| |||| || || |||| |||| |||||||| ||||||||||| ||||||||||      
T  47009202 actcatttttcaacactctttctagcactcactcttttattggataaaattaatgtttgtctcaccgctttgtgtgagttcaattttcaaagtgtagata 47009301  T
Q  152 cacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||| |||||||||||||||| |||||||||||||||| |||||||||||| | ||||||    
T  47009302 cacaatgatttaaaccaataagaaagtgagtattagagagggtgttcaaaagagaatgttgc 47009363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 20454551 - 20454712
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||| ||||||||||||||||||||||||||||| ||| ||| ||| ||||||| ||||||||   ||||||||||  |||||||||| ||||||||||    
T  20454551 acacttacttttcaacactctctctagcactcactcttttattagataaaatcaatgtatgtcca--cactttgtgttggttcaattttcaaagtgtaga 20454648  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     ||||||| ||||||| |||||| ||||||||| ||||||||||||||||||||| | ||||||    
T  20454649 tccacaatgatttaaatcaataacagagtgagtgttagagagagtgttcaaaagagaatgttgc 20454712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 50 - 212
Target Start/End: Original strand, 49242181 - 49242343
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| |||||||| |||| || ||||||||| |||||||||||||||  ||||||||| ||||||||||  |||||||||| || |||||||    
T  49242181 acactcacttttgaacactctatctaacagtcactttttaattggatgaaatcaatatatgtcccatcactttgtgtgggttcaattttcaatgtgtaga 49242280  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
      |||||| |||||||||||||||||| ||||||| | |||||||||| |||||| |||||||    
T  49242281 ttcacaatgatttaaaccaataagagaatgagtatcatagagagtgtttaaaagagagtgttg 49242343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 71 - 213
Target Start/End: Original strand, 52671862 - 52672004
Alignment:
Q  71 ctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaat 170  Q
    |||||| ||||||||||| |||||||||||| || ||||||||||||| ||| |||||||||||||||||||||||| |  | |||| |||||||| |||    
T  52671862 ctctagtactcacttttttattggatgaaataaatgtatgtcccaccattttatgtaagttcaatttttaaagtgtaaattctcaatgatttaaactaat 52671961  T
Q  171 aagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||| ||||||||||| |||||||||| |||||| | ||||||    
T  52671962 aagatagtgagtattaaagagagtgtttaaaagataatgttgc 52672004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 213
Target Start/End: Complemental strand, 24938557 - 24938421
Alignment:
Q  77 cactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagaga 176  Q
    |||||||| ||| |||||||| |||||| ||||||||||||| ||||| |   |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  24938557 cactcactcttttattggatgtaatcaatgtatgtcccaccattttgtttggattcaatttttaaagtgtagacctacaatgatttaaaccaataagaga 24938458  T
Q  177 gtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    || ||||||||||| |||||| |||||| | ||||||    
T  24938457 gtaagtattagagaaagtgttgaaaagataatgttgc 24938421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 26361446 - 26361314
Alignment:
Q  81 cactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtga 180  Q
    |||| ||| |||||||||| |||| ||||| ||||||| |||||||  ||||||| || |||||||||||||| ||| ||||||||||||||| ||||||    
T  26361446 cactcttttattggatgaagtcaatgtatgacccaccattttgtgtgggttcaatattcaaagtgtagacccataatgatttaaaccaataagtgagtga 26361347  T
Q  181 gtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||||||| |||||||||||| ||||||||    
T  26361346 gtattagagagggtgttcaaaagagagtgttgc 26361314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 22542432 - 22542554
Alignment:
Q  90 attggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagag 189  Q
    |||| ||||||||||||||||| ||||||||||||||  |||||||||| ||||  ||| |||||||| |||||||| ||||||||||||||||||| |     
T  22542432 attgaatgaaatcaaagtatgttccaccactttgtgtgggttcaattttcaaagaatagtcccacaatgatttaaactaataagagagtgagtattaaaa 22542531  T
Q  190 agagtgttcaaaagaaagtgttg 212  Q
    ||||||||||||||| |||||||    
T  22542532 agagtgttcaaaagatagtgttg 22542554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 49077260 - 49077385
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| ||||||||| ||||| ||||||||| | ||| ||| ||| |||| ||  ||||||||||||||||||||  |||||||||||||||||||||    
T  49077260 acactcagttttcaacattctctttagcactcattcttttattagataaaattaatatatgtcccaccactttgtgtgggttcaatttttaaagtgtaga 49077359  T
Q  150 cccacaataatttaaaccaataagag 175  Q
    |||||||| |||||||||||||||||    
T  49077360 cccacaatgatttaaaccaataagag 49077385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 180
Target Start/End: Complemental strand, 50481708 - 50481584
Alignment:
Q  56 acttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccaca 155  Q
    ||||||||||||||| | |  |||||||| ||| ||||||||||||||||||||||| ||||||||||| |   ||| ||||| ||||||||||| ||||    
T  50481708 acttttcaacactctttttctcactcactcttttattggatgaaatcaaagtatgtctcaccactttgtatggtttctattttcaaagtgtagacacaca 50481609  T
Q  156 ataatttaaaccaataagagagtga 180  Q
    || ||||||||||||||||||||||    
T  50481608 atcatttaaaccaataagagagtga 50481584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 33653658 - 33653511
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| ||||||||||||||||||  | |||||  || ||| ||||||||||| ||||||||||||| ||||||    ||||||||| ||| | | ||    
T  33653658 acactcagttttcaacactctctctattaatcactcatttatttgatgaaatcaatgtatgtcccaccattttgtggggtttcaattttcaaaatattga 33653559  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
     ||||||| |||||||||||||||| ||||||||||||||||||||||    
T  33653558 tccacaatgatttaaaccaataagaaagtgagtattagagagagtgtt 33653511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 191
Target Start/End: Complemental strand, 5044679 - 5044568
Alignment:
Q  80 tcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtg 179  Q
    ||||||||| |||||||||||||||  |||||| ||| | ||||||| ||||||||||||||| |||||||||||||  |||||||||||||| ||| ||    
T  5044679 tcacttttttattggatgaaatcaatatatgtcacactattttgtgtgagttcaatttttaaaatgtagacccacaacgatttaaaccaataaaagaatg 5044580  T
Q  180 agtattagagag 191  Q
    | ||||||||||    
T  5044579 aatattagagag 5044568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 20225508 - 20225383
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| ||||||||||  |||||||||| ||| |||||||| |||| | | ||||||||||||||| |||  |||| ||||  ||||||||||    
T  20225508 acactcacttttgaacactctct--agcactcactcttttattggatggaatccatgcatgtcccaccactttttgtgggttctatttccaaagtgtaga 20225411  T
Q  150 cccacaataatttaaaccaataagagag 177  Q
    | |||||| |||||||||||||||||||    
T  20225410 ctcacaatgatttaaaccaataagagag 20225383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 201
Target Start/End: Original strand, 29699500 - 29699650
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||| ||||||| || || || ||||||||||||| ||| |||||||||||||||   |||||||||||||||||||  |||| | ||| ||||| |||     
T  29699500 acacccacttttgaataccctttctagcactcactcttttattggatgaaatcaatacatgtcccaccactttgtgttggttcta-tttcaaagtatagc 29699598  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaa 201  Q
    || ||||| ||||||| |||||||||||||| ||||||| ||||||| ||||    
T  29699599 ccgacaatgatttaaaacaataagagagtgaatattagatagagtgtacaaa 29699650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 186
Target Start/End: Complemental strand, 10169808 - 10169678
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    |||||||||||||||||||  |  | ||||| | | |||||||||||||||  ||||||| |||||||||||| ||||||||||| |||   |||| |||    
T  10169808 tcacttttcaacactctct--aatattcactctattattggatgaaatcaatatatgtcctaccactttgtgtgagttcaattttcaaaacatagatcca 10169711  T
Q  154 caataatttaaaccaataagagagtgagtatta 186  Q
    |||| |||||||||||||||||||||| |||||    
T  10169710 caattatttaaaccaataagagagtgaatatta 10169678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 25719268 - 25719127
Alignment:
Q  64 acactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag-acccacaataattt 162  Q
    |||||||||| | |||||||| | | ||||| ||||||||| ||||||||||||||||| |||  |||  ||||  ||| ||||| ||||||||| ||||    
T  25719268 acactctctcaaacactcactctcttattggttgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaaatgtaggacccacaatgattt 25719169  T
Q  163 aaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    || ||||| ||||||||||||||||||| | |||||||||||    
T  25719168 aacccaatcagagagtgagtattagagaaattgttcaaaaga 25719127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 213
Target Start/End: Complemental strand, 31251012 - 31250888
Alignment:
Q  90 attggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagta-ttaga 188  Q
    ||||||||||||||| ||||||||||||| ||| || | |||||||||| ||| |||||||||||||| ||||||| |||||| ||||| | || |||||    
T  31251012 attggatgaaatcaatgtatgtcccaccattttatggacgttcaattttcaaaatgtagacccacaatgatttaaatcaataaaagagtaaatatttaga 31250913  T
Q  189 gagagtgttcaaaagaaagtgttgc 213  Q
    |||||| || |||| | ||||||||    
T  31250912 gagagtatttaaaatagagtgttgc 31250888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 212
Target Start/End: Complemental strand, 43124641 - 43124521
Alignment:
Q  92 tggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagag 191  Q
    ||||||||||||| ||||||||||||| |||||||| | |  ||||| ||| |||| |||||  |  ||||||||||||||||||||| |||||| | ||    
T  43124641 tggatgaaatcaatgtatgtcccaccattttgtgtaggctttattttcaaactgtatacccatgaagatttaaaccaataagagagtgcgtattataaag 43124542  T
Q  192 agtgttcaaaagaaagtgttg 212  Q
    |||||||||| ||||||||||    
T  43124541 agtgttcaaaggaaagtgttg 43124521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 202
Target Start/End: Complemental strand, 48339509 - 48339357
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||| || | |||||||| || |||||||| | | ||||||  ||||||| |||||| ||||||||||||||  |||||||||| |||| |||||    
T  48339509 acactcactattgagcactctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtaga 48339410  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaa 202  Q
    |||| |||  ||||||||||||| ||||||  | ||||||| |||| ||||||    
T  48339409 cccataatgctttaaaccaataaaagagtggatgttagagaaagtgctcaaaa 48339357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 90 - 213
Target Start/End: Complemental strand, 45311077 - 45310954
Alignment:
Q  90 attggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagag 189  Q
    |||||||||||||||  |||||||||||||||||||    ||||||||| |||||| ||||  ||||| ||||||| |||||||||||| ||||||||||    
T  45311077 attggatgaaatcaatatatgtcccaccactttgtggggattcaattttcaaagtgaagacttacaatgatttaaatcaataagagagtaagtattagag 45310978  T
Q  190 agagtgttcaaaagaaagtgttgc 213  Q
    ||   |||||||||| | ||||||    
T  45310977 agtcagttcaaaagagaatgttgc 45310954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 47237910 - 47237812
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag 148  Q
    |||||| ||||| |||||||||||||||| ||||| ||| |||||||||||||||  |||||||||||||||| | ||||||  ||||| |||||||||    
T  47237910 acactctcttttgaacactctctctagcattcactcttttattggatgaaatcaatatatgtcccaccactttatataagtttcattttcaaagtgtag 47237812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 213
Target Start/End: Original strand, 19447182 - 19447306
Alignment:
Q  90 attggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag-acccacaataatttaaaccaataagagagtgagtattaga 188  Q
    ||||| ||||| ||| ||||||||||||||||| |||  |||| ||||| ||| || || ||| ||||| ||||||  |||| ||||||||||||||| |    
T  19447182 attgggtgaaaccaatgtatgtcccaccactttatgtgggttccattttcaaaatgcaggaccgacaatgatttaactcaattagagagtgagtattaaa 19447281  T
Q  189 gagagtgttcaaaagaaagtgttgc 213  Q
    |||||||||||||||| ||||||||    
T  19447282 gagagtgttcaaaagagagtgttgc 19447306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 213
Target Start/End: Complemental strand, 38537641 - 38537519
Alignment:
Q  94 gatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaa---agtgtagacccacaataatttaaaccaataagagagtgagtattagaga 190  Q
    ||||||||||| |||||||  || ||||||| | ||||||||||| ||   ||||||||  || ||| ||||||| |||||| ||| ||| |||||||||    
T  38537641 gatgaaatcaatgtatgtcttactactttgtatgagttcaattttcaacaaagtgtagattcataatgatttaaatcaataaaagaatgattattagaga 38537542  T
Q  191 gagtgttcaaaagaaagtgttgc 213  Q
    |||||||||||||||||||||||    
T  38537541 gagtgttcaaaagaaagtgttgc 38537519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 146
Target Start/End: Complemental strand, 42862590 - 42862494
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgt 146  Q
    |||||| ||||| | |||| ||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| |||  |||| ||||| |||||||    
T  42862590 acactctcttttgagcactttctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgt 42862494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 157
Target Start/End: Original strand, 50571879 - 50571982
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||||||||||||||||||||| ||| ||| ||| ||||||||||| ||||| |||| || ||| |||   ||||||||| |||||||||||||     
T  50571879 tcacttttcaacactctctctagcacttactcttttattagatgaaatcaatgtatgccccatcaatttatgtggcttcaattttcaaagtgtagacccg 50571978  T
Q  154 caat 157  Q
    ||||    
T  50571979 caat 50571982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 13069954 - 13070115
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gac 150  Q
    |||| ||||| | ||| |||||||||||||||| ||| ||||| ||||||||| |||||| |||||||||| |||  |||| ||||| |||||||| | |    
T  13069954 actctcttttgagcacactctctagcactcactcttttattgg-tgaaatcaatgtatgttccaccactttatgtgggttccattttcaaagtgtaggtc 13070052  T
Q  151 ccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    | ||| | |||| |  |||||| ||||||||| ||||||| | ||||||||||| ||||||||    
T  13070053 ctacattgattttactcaataaaagagtgagtgttagagaaaatgttcaaaagagagtgttgc 13070115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 46242111 - 46242000
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| ||||||||||  || ||||||  ||| || |||||||||||  ||||||||||||| |||||||| |||||||||| ||| | ||||    
T  46242111 acactcactttttaacactctct--agaactcacacttttatgggatgaaatcattgtatgtcccaccattttgtgtaggttcaattttcaaaatataga 46242014  T
Q  150 cccacaataattta 163  Q
    |||||||| |||||    
T  46242013 cccacaatgattta 46242000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 30867086 - 30866937
Alignment:
Q  65 cactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga-cccacaataattta 163  Q
    |||| ||||||||||||||||||| ||||||| |||| || ||||||||||||||||| |||  |||| ||||| |||||||||| |||||| |  |||     
T  30867086 cactatctctagcactcacttttttattggattaaattaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagatcccacattgttttc 30866987  T
Q  164 aaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    | | ||||| | | |||||  ||||||||||||| |||||| || |||||    
T  30866986 acctaataaaaaaatgagtgctagagagagtgtttaaaagagagcgttgc 30866937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 46536384 - 46536295
Alignment:
Q  97 gaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 186  Q
    ||||||||  ||||||  ||||||||||||| |||||||||| |||||||| ||||||| || |||||| |||||||||||||| |||||    
T  46536384 gaaatcaatatatgtcataccactttgtgtatgttcaattttcaaagtgtaaacccacactattttaaagcaataagagagtgaatatta 46536295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 186
Target Start/End: Complemental strand, 50652477 - 50652369
Alignment:
Q  77 cactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagaga 176  Q
    ||||||| |||| |||| || ||||||| |||| || |||||||||||||| |||||||||| ||| |||||||  ||||||||||||| |||||||| |    
T  50652477 cactcacctttt-attgcataaaatcaatgtatatctcaccactttgtgtaggttcaattttcaaaatgtagacgtacaataatttaaatcaataagaaa 50652379  T
Q  177 gtgagtatta 186  Q
    |||| |||||    
T  50652378 gtgaatatta 50652369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 22592318 - 22592402
Alignment:
Q  53 ctcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaattt 137  Q
    ||||||||| |||| ||||||| ||||||||| ||| |||||||||||| || || ||||||||||||||||||| |||| ||||    
T  22592318 ctcacttttgaacattctctctggcactcactcttttattggatgaaataaatgtttgtcccaccactttgtgtaggttctattt 22592402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 49682950 - 49682838
Alignment:
Q  60 ttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataa 159  Q
    ||||||||| ||| ||||| ||||||||| || |||||||||||| |||| || ||||||||| | | | ||||||||| |||||||||| |||||   |    
T  49682950 ttcaacactttctttagcattcacttttttatcggatgaaatcaatgtatatctcaccactttatttgaattcaattttcaaagtgtagagccacatcga 49682851  T
Q  160 tttaaaccaataa 172  Q
    |||||||||||||    
T  49682850 tttaaaccaataa 49682838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 19937307 - 19937180
Alignment:
Q  84 tttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagta 183  Q
    ||||| |||||||  |||||| ||||||||||||| | | ||| ||||| ||||| ||||| |||| | ||||| ||| ||||||| || |||||||| |    
T  19937307 tttttaattggatacaatcaatgtatgtcccaccattatatgtgagttctattttcaaagtatagatcgacaatgattcaaaccaacaaaagagtgagaa 19937208  T
Q  184 ttagagagagtgttcaaaagaaagtgtt 211  Q
    ||| |||||||||| |||||| ||||||    
T  19937207 ttaaagagagtgtttaaaagagagtgtt 19937180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 185
Target Start/End: Original strand, 46287452 - 46287587
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||| | | | ||||||||| ||| ||| |||||||||||| ||  ||||||  || |||||||||   ||||||||| ||||||| ||    
T  46287452 acactcacttttcaatattttttctagcacttactattttattggatgaaattaatatatgtcttactactttgtgtgtattcaattttcaaagtgttga 46287551  T
Q  150 cccacaataatttaaaccaataagagagtgagtatt 185  Q
    | |||||| ||||||||||||| || |||| |||||    
T  46287552 ctcacaatgatttaaaccaatacgaaagtgggtatt 46287587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 18421967 - 18421837
Alignment:
Q  81 cactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtga 180  Q
    |||||||| ||| ||||||||||| ||||||||||||||| |||||  ||| |||||||||||| |  |   ||||| |||||||||||||| | |||||    
T  18421967 cacttttttattagatgaaatcaatgtatgtcccaccactgtgtgt--gtttaatttttaaagtatgtatttacaatgatttaaaccaataaaaaagtga 18421870  T
Q  181 gtattagagagagtgttcaaaagaaagtgttgc 213  Q
     ||||| | | ||| ||||||||| ||||||||    
T  18421869 atattaaataaagtattcaaaagagagtgttgc 18421837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 37451104 - 37451023
Alignment:
Q  128 agttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtg 209  Q
    ||||| ||||| ||||||||||| | |||| |||||||||||||| |||||||||||||||||  ||||| |||||| ||||    
T  37451104 agttctattttcaaagtgtagactcgcaatgatttaaaccaataaaagagtgagtattagagaaggtgtttaaaagagagtg 37451023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 39016681 - 39016838
Alignment:
Q  57 cttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag-acccaca 155  Q
    ||||| |||||||||| || |||| ||| ||| ||||||||||||||| ||||||||||||| |||  ||  |||| ||||  ||||||||| | | |||    
T  39016681 cttttaaacactctctataacacttactattttattggatgaaatcaatgtatgtcccaccattttacgtgggttccatttccaaagtgtagtatctaca 39016780  T
Q  156 ataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     | |||| | | ||||| ||||| |||  |||||||||||||||||||| ||||||||    
T  39016781 ttgattttacctaataaaagagtaagtgctagagagagtgttcaaaagagagtgttgc 39016838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 51206079 - 51206218
Alignment:
Q  75 agcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccc-acaataatttaaaccaataag 173  Q
    ||||||||||  || ||| ||||||||||| |||||||||| |||||| ||| ||||  ||||| ||| |||||  || ||| | |||| | |||||||     
T  51206079 agcactcactcatttattagatgaaatcaatgtatgtcccatcactttatgtgagtttcattttcaaaatgtaggtcctacattgatttcacccaataaa 51206178  T
Q  174 agagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||||  ||||||||||| |||||||| ||||||||    
T  51206179 agagtgagtgctagagagagtgctcaaaagagagtgttgc 51206218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 1560051 - 1559921
Alignment:
Q  82 actttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgag 181  Q
    ||||||| |||| ||| ||||||  |||||||||| | ||| ||| ||||| ||||   | |||||||| || ||| |||||||||||||||| | | |     
T  1560051 acttttttattgaatgtaatcaacatatgtcccactaatttttgtgagttctatttcctaggtgtagactcaaaatgatttaaaccaataagaaattcaa 1559952  T
Q  182 tattagagagagtgttcaaaagaaagtgttg 212  Q
    |||||| |||||||||||||| |||||||||    
T  1559951 tattagtgagagtgttcaaaataaagtgttg 1559921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 11895138 - 11895212
Alignment:
Q  140 aaagtgtagacccacaataatttaaaccaataagagagtgagtattag-agagagtgttcaaaagaaagtgttgc 213  Q
    |||||||||||||||||| |||| ||| |||||||||||||||| ||| | | ||||||||||||| ||||||||    
T  11895138 aaagtgtagacccacaatgatttgaacgaataagagagtgagtaatagaaaaaagtgttcaaaagagagtgttgc 11895212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 172
Target Start/End: Complemental strand, 41153351 - 41153245
Alignment:
Q  66 actctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaa 165  Q
    ||||||| || |||| ||| ||| ||||||||||||  | | |||||||||||||||||||| |||| |||| ||||||||| |  |||||| ||||| |    
T  41153351 actctctttatcacttactcttttattggatgaaattcatgcatgtcccaccactttgtgtaggttctatttctaaagtgtacattcacaatgatttaga 41153252  T
Q  166 ccaataa 172  Q
    |||||||    
T  41153251 ccaataa 41153245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 45081821 - 45081759
Alignment:
Q  140 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaa 202  Q
    |||||||| || ||||||||||||||||||||| ||||||||||||||| ||| | |||||||    
T  45081821 aaagtgtacactcacaataatttaaaccaataaaagagtgagtattagaaagaattttcaaaa 45081759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 13519960 - 13520084
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaa--tcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||| |||| || ||||||| ||||||||||| ||| ||||||| |||  |||| |||||| |||||||||||||   ||||  |||  || ||||| |    
T  13519960 actcatttttaaatactctctgtagcactcactatttaattggataaaaaatcaatgtatgttccaccactttgtgcgggttctgtttccaatgtgtata 13520059  T
Q  150 cccacaataatttaaaccaataaga 174  Q
    |||||||| ||||||||||||||||    
T  13520060 cccacaatgatttaaaccaataaga 13520084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 197
Target Start/End: Original strand, 16178610 - 16178742
Alignment:
Q  65 cactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataattta 163  Q
    |||||||||||||||||||| ||| ||||  ||||||||| ||||||||||||||||| |||  |||| ||||  |||||||| |  | ||| | ||||     
T  16178610 cactctctctagcactcactcttt-attgagtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggttctacattgatttc 16178708  T
Q  164 aaccaataagagagtgagtattagagagagtgtt 197  Q
    | ||||||| ||||||||  ||||||||||||||    
T  16178709 atccaataaaagagtgagagttagagagagtgtt 16178742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 5545645 - 5545753
Alignment:
Q  106 gtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    ||||||||||||||||| |||  | || ||||| ||| |||| |||||||| | |||||| | ||| | | ||| |||||||||||||||||||||||||    
T  5545645 gtatgtcccaccactttatgtgggctccattttcaaaatgtaagacccacattgatttaagcaaattaaaaagtaagtattagagagagtgttcaaaaga 5545744  T
Q  205 aagtgttgc 213  Q
     ||||||||    
T  5545745 gagtgttgc 5545753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 37315574 - 37315669
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag 148  Q
    |||||| ||||| | ||||||||||| |||||||| |||   ||| ||||||||| ||||||||||||||||| ||||||||  ||||| |||| ||||    
T  37315574 acactctcttttgagcactctctctaacactcactcttt---tgggtgaaatcaatgtatgtcccaccactttatgtaagtttcattttcaaagcgtag 37315669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 52279348 - 52279276
Alignment:
Q  130 ttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaa 202  Q
    ||||||||| ||||| |||||||||||| ||||| | ||||| |||||||| ||||||| |||||||| ||||    
T  52279348 ttcaattttcaaagtttagacccacaatgatttagatcaataggagagtgaatattagatagagtgtttaaaa 52279276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 169
Target Start/End: Complemental strand, 33996104 - 33995985
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||| ||||||||||| ||||||| || ||||| ||| |||  || ||||||| ||||||| ||||||||| |||  |||||||||| ||| | || |    
T  33996104 acactctcttttcaacacactctctaacattcactcttttattaaatcaaatcaatgtatgtctcaccactttttgtgggttcaattttcaaaatttaaa 33996005  T
Q  150 cccacaataatttaaaccaa 169  Q
    | ||||||  ||||||||||    
T  33996004 ctcacaatggtttaaaccaa 33995985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 204
Target Start/End: Original strand, 43958162 - 43958313
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| |||| |||| ||||||||||| ||||| ||| |||| ||  |||||| ||||||||||||| ||| |||  | || ||||| ||  || |||    
T  43958162 acactcagtttttaacattctctctagcattcactcttttattgaatagaatcaatgtatgtcccaccattttatgtg-gatctattttcaatatgcaga 43958260  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
      || | | |||||||||||||||||||| ||||  |||||||||||||||||||    
T  43958261 atcaaagtgatttaaaccaataagagagtaagta--agagagagtgttcaaaaga 43958313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 1559886 - 1559812
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgt 124  Q
    ||||||||||||  ||||||||| |||||||||||  || |||| ||| |||||| ||||||||||||| |||||    
T  1559886 acactcacttttgtacactctctttagcactcactcctttattgaatggaatcaacgtatgtcccaccaatttgt 1559812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 38636375 - 38636489
Alignment:
Q  77 cactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagaga 176  Q
    |||||||| ||| ||| ||| ||||||| ||||||| ||| ||||| |||  ||  ||||||||||||||||| ||||||| ||||| | |||||||| |    
T  38636375 cactcactcttttatttgataaaatcaatgtatgtctcactactttatgtgggtctaatttttaaagtgtagatccacaatgatttatatcaataagaaa 38636474  T
Q  177 gtgagtattagagag 191  Q
     | | ||||||||||    
T  38636475 ataaatattagagag 38636489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 2088818 - 2088701
Alignment:
Q  66 actctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga-cccacaataatttaa 164  Q
    |||||||||| |||||||| ||| ||||  ||||||||| ||||||||||||||||| |||   ||| ||||  |||||||||| ||  || ||||||||    
T  2088818 actctctctaacactcactctttaattgagtgaaatcaatgtatgtcccaccactttatgtggattccatttccaaagtgtagatcctgcattaatttaa 2088719  T
Q  165 accaataagagagtgagt 182  Q
     | ||||| |||||||||    
T  2088718 gctaataaaagagtgagt 2088701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 27654487 - 27654560
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    ||||||| ||||||||||||||||||| |||||| | | | ||||||| |||  || |||||||||||||||||    
T  27654487 gacactctcttttcaacactctctctaacactcattctcttattggataaaactaatgtatgtcccaccacttt 27654560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 2187982 - 2187819
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-g 148  Q
    |||||| ||||| | |||||||||||||  || || ||| ||||| ||||||||| | ||||||||||||||| |||  |||| ||||| |||||||| |    
T  2187982 acactctcttttgagcactctctctagctttcgctcttttattgggtgaaatcaatgaatgtcccaccactttatgtgggttc-attttcaaagtgtagg 2187884  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     |||||| |  ||| |  |||||| | | ||||| |||||||||||| |||||||  ||||||||    
T  2187883 tcccacattgttttcacacaataaaaaaatgagtgttagagagagtgctcaaaagcgagtgttgc 2187819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 2860916 - 2861024
Alignment:
Q  78 actcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagag 177  Q
    |||||||||||  ||||||||||| || |||| | ||| | |||| |||   ||||||||| |||||||||| |||||||| ||||| ||||| |  |||    
T  2860916 actcacttttttgttggatgaaattaatgtattttccatccctttctgtggattcaattttcaaagtgtagatccacaatagtttaagccaatcaccgag 2861015  T
Q  178 tgagtatta 186  Q
    |||||||||    
T  2861016 tgagtatta 2861024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 19933557 - 19933482
Alignment:
Q  138 ttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||||||||  ||||| |||||||| |||||  ||||  |||||| ||||||||||||||| | ||||||||    
T  19933557 ttaaagtgtagactaacaatgatttaaactaataaatgagttggtattaaagagagtgttcaaaatagagtgttgc 19933482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 19321947 - 19321901
Alignment:
Q  148 gacccacaataatttaaaccaataagagagtgagtattagagagagt 194  Q
    ||||| |||| ||| |||||||||||||||| |||||||||||||||    
T  19321947 gacccgcaatgattcaaaccaataagagagtaagtattagagagagt 19321901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 21777000 - 21776942
Alignment:
Q  64 acactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    |||||||||||| || ||||| ||| ||||||| ||||||| |||||||| ||||||||    
T  21777000 acactctctctaacattcactcttttattggataaaatcaatgtatgtcctaccacttt 21776942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 40812056 - 40812102
Alignment:
Q  58 ttttcaacactctctctagcactcactttttcattggatgaaatcaa 104  Q
    |||| |||||||||||||||||||||| ||| ||||| |||||||||    
T  40812056 ttttgaacactctctctagcactcactcttttattgggtgaaatcaa 40812102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 51206215 - 51206161
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaa 104  Q
    |||||| ||||| | |||||||||||||||||||| ||| ||||| |||||||||    
T  51206215 acactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaa 51206161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 51904687 - 51904621
Alignment:
Q  147 agacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| || |||||| |||||||||  || ||| |||||||||||||| |||||| ||||||||    
T  51904687 agacccaccatgatttaagccaataagaatgtaagtgttagagagagtgttgaaaagagagtgttgc 51904621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 3783496 - 3783412
Alignment:
Q  84 tttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaacca 168  Q
    ||||| |||| || |||| || ||||||||||| ||||||| ||  ||| |||| |||  |||||| ||||||||||||||||||    
T  3783496 ttttttattgtataaaattaatgtatgtcccacaactttgtatagattctatttctaagatgtagatccacaataatttaaacca 3783412  T

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Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 24106818 - 24106766
Alignment:
Q  48 tgacactcacttttcaacactctctctagcactcactttttcattggatgaaa 100  Q
    |||||||| ||||||||||||||||||| ||| |||| | | |||||||||||    
T  24106818 tgacactctcttttcaacactctctctaacacccactctcttattggatgaaa 24106766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 24106772 - 24106816
Alignment:
Q  166 ccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    |||||||||||||| || |||||||||||||| |||||| |||||    
T  24106772 ccaataagagagtgggtgttagagagagtgttgaaaagagagtgt 24106816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 27654532 - 27654488
Alignment:
Q  166 ccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    ||||||||||| ||||| |||||||||||||| |||||| |||||    
T  27654532 ccaataagagaatgagtgttagagagagtgttgaaaagagagtgt 27654488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 211
Target Start/End: Original strand, 34961762 - 34961819
Alignment:
Q  152 cacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgtt 211  Q
    ||||||||||||||| ||||| ||||||||||||  | |||||||||||| || ||||||    
T  34961762 cacaataatttaaactaataaaagagtgagtatt--aaagagtgttcaaacgagagtgtt 34961819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 37050695 - 37050643
Alignment:
Q  152 cacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |||||| |||||||||||||| | | ||||||||| ||||||| |||||||||    
T  37050695 cacaatgatttaaaccaataaaaaaatgagtattaaagagagtattcaaaaga 37050643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 53871032 - 53870996
Alignment:
Q  50 acactcacttttcaacactctctctagcactcacttt 86  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  53871032 acactcactttccaacactctctctaacactcacttt 53870996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 2e-73; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 28490887 - 28490728
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28490887 tcacttttcaaaactctctctagcattcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaattttgaaagtgtagaccca 28490788  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28490787 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgc 28490728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 10142143 - 10141998
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| ||||||||||||| |  |||||||||| ||| ||||||| ||||||| |||||||||||||||||||||  |||| ||||| ||||||||||    
T  10142143 acactcatttttcaacactctat--agcactcactcttttattggataaaatcaatgtatgtcccaccactttgtgttggttccattttcaaagtgtaga 10142046  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    || ||||| ||||||| |||||||||||||||| ||||||||||||||    
T  10142045 ccaacaattatttaaatcaataagagagtgagtgttagagagagtgtt 10141998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 210
Target Start/End: Complemental strand, 30326039 - 30325883
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||  ||||||||| ||||||||||| ||| ||||||||||||||| ||||||| ||||||||| ||  ||||| || |  |||||||||| ||     
T  30326039 tcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatctccaaagtgtagatccg 30325940  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  30325939 caatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgt 30325883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 213
Target Start/End: Original strand, 34368379 - 34368534
Alignment:
Q  58 ttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaat 157  Q
    |||| |||||| |||||| |||||||| ||||||||||| ||| ||| |||||| ||||||||||||||  ||||| |||| ||||||||||||||||||    
T  34368379 ttttgaacactttctctaacactcactctttcattggataaaaccaatgtatgttccaccactttgtgtgggttcatttttcaaagtgtagacccacaat 34368478  T
Q  158 aatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     ||||||||||||||||||||| ||   |||||||||| |||||||| ||||||||    
T  34368479 gatttaaaccaataagagagtgggtgacagagagagtgctcaaaagagagtgttgc 34368534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 62 - 213
Target Start/End: Complemental strand, 41105727 - 41105576
Alignment:
Q  62 caacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatt 161  Q
    ||||||||||| ||  ||| ||| ||| ||||||||||||||| | ||||||||| |||||||||  |||||||||| |||||| | ||||||| | |||    
T  41105727 caacactctctataaaacttactcttttattggatgaaatcaagggatgtcccactactttgtgtgggttcaattttcaaagtgcatacccacagtgatt 41105628  T
Q  162 taaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||||||||||| ||||||||||||||||| |||||||| ||||||||    
T  41105627 taaaccaataagagagcgagtattagagagagtgctcaaaagagagtgttgc 41105576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 52 - 197
Target Start/End: Complemental strand, 17537269 - 17537124
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacc 151  Q
    |||||||||||||||||||||||| |||||||| ||| ||| ||| ||||||| ||||||||||||| ||| |||  ||| |||||| |||||||||| |    
T  17537269 actcacttttcaacactctctctatcactcactcttttatttgatcaaatcaatgtatgtcccaccaatttttgttggtttaattttcaaagtgtagatc 17537170  T
Q  152 cacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    || ||| |||||||||||||||||||||| ||| ||||||| ||||    
T  17537169 cataatgatttaaaccaataagagagtgaatataagagagattgtt 17537124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 78 - 213
Target Start/End: Complemental strand, 5413878 - 5413740
Alignment:
Q  78 actcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagag 177  Q
    ||||||| ||| ||||||||||||||| |||||||||||||||||||||  |||||||||  |||||||||||||| ||| |||||||||||||| | ||    
T  5413878 actcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgtagacccataatgatttaaaccaataaaaaag 5413779  T
Q  178 tgagtatta---gagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||||    ||||||||||||||||| ||||||||    
T  5413778 tgagtattatagtagagagtgttcaaaagagagtgttgc 5413740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 69 - 181
Target Start/End: Original strand, 39246638 - 39246750
Alignment:
Q  69 ctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaacca 168  Q
    ||||||| || ||||||| | ||||||| ||||||| ||||||||||||||||||||| |||||| |||| ||||||||||||||||||| |||||||||    
T  39246638 ctctctaacaatcactttcttattggataaaatcaatgtatgtcccaccactttgtgtgagttcagttttcaaagtgtagacccacaatactttaaacca 39246737  T
Q  169 ataagagagtgag 181  Q
    |||||||||||||    
T  39246738 ataagagagtgag 39246750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 62 - 197
Target Start/End: Complemental strand, 25710629 - 25710494
Alignment:
Q  62 caacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatt 161  Q
    ||||||||||| || |||||||| ||| ||||  ||||||||| |||||||| ||||||| || | ||||| ||||| ||||||||||||||||||||||    
T  25710629 caacactctctttatcactcactcttttattgtgtgaaatcaatgtatgtcctaccacttcgtatgagttctattttcaaagtgtagacccacaataatt 25710530  T
Q  162 taaaccaataagagagtgagtattagagagagtgtt 197  Q
    ||||||||||||||| ||| ||||| ||||||||||    
T  25710529 taaaccaataagagaatgaatattaaagagagtgtt 25710494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 28611947 - 28611784
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| | ||||||||||| || ||||| |||||||||||  || ||  |||||||||| |||||||| | ||||| ||||||||||||||||    
T  28611947 acactcacttttgagcactctctctaacattcactctttcattggatataaccagtgtatgtcccatcactttgtatgagttccatttttaaagtgtaga 28611848  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    | |||||| ||||||| |||||| |||||  || |||||||||||| |||||||| ||||||||    
T  28611847 cgcacaatgatttaaatcaataaaagagttggtgttagagagagtgctcaaaagagagtgttgc 28611784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 37455360 - 37455526
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| |||| ||||||||||||||||| ||||  || ||| ||| ||||||| |||||| |||||| ||||||   |||||||||| ||||||||||    
T  37455360 acactcattttttaacactctctctagcacacactcatttattcgataaaatcaatgtatgttccaccattttgtgggggttcaattttcaaagtgtaga 37455459  T
Q  150 cccacaataatttaaaccaataagagagtgagtattaga----gagagtgttcaaaagaaagtgttgc 213  Q
    | |||||||| ||||||||||||||||||||||||||||    ||| |||||||||||| ||||||||    
T  37455460 ctcacaataa-ttaaaccaataagagagtgagtattagagagggagggtgttcaaaagagagtgttgc 37455526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 50 - 212
Target Start/End: Complemental strand, 27592621 - 27592459
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||| |||||  ||||||||| ||||||||||| ||| ||||||||||||||| ||||||| ||||||||| ||  ||||| ||||  ||||||||||    
T  27592621 acactcgcttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtaga 27592522  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
     |  |||| ||||||||||||||||||||| |||   |||||||| ||||||||| |||||||    
T  27592521 tctgcaatgatttaaaccaataagagagtgggtacaggagagagtattcaaaagagagtgttg 27592459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 209
Target Start/End: Complemental strand, 34384857 - 34384701
Alignment:
Q  53 ctcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccc 152  Q
    ||||||||| || ||| ||| || |||||| | ||| ||||| ||||||||| ||||||||||| | ||||||| ||||||||||| ||| | ||||| |    
T  34384857 ctcactttttaatactttctttaacactcattcttttattgggtgaaatcaatgtatgtcccactattttgtgtgagttcaattttcaaattatagactc 34384758  T
Q  153 acaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtg 209  Q
    ||||| ||||| ||| |||| ||||||||||||| ||||||||||||||||| ||||    
T  34384757 acaatgatttagaccgataaaagagtgagtattaaagagagtgttcaaaagagagtg 34384701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 204
Target Start/End: Complemental strand, 41330554 - 41330408
Alignment:
Q  58 ttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaat 157  Q
    |||| |||||||| | |||||  |||| ||| ||| |||||||| || |||||||||| ||||||||||| |||||||||| ||||||||||| ||||||    
T  41330554 ttttgaacactctttgtagcatccactcttttattagatgaaattaatgtatgtcccatcactttgtgtaggttcaattttcaaagtgtagactcacaat 41330455  T
Q  158 aatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
     |||||||||||||||| |   ||||||| |||| ||||||||||||    
T  41330454 gatttaaaccaataagaaatgtagtattaaagagtgtgttcaaaaga 41330408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 197
Target Start/End: Original strand, 43405406 - 43405551
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacc 151  Q
    ||||| |||| ||||| |||| |  |||||||| ||| |||| |||||||||| ||||||| ||||||||||| || |||| ||||  ||||||||||||    
T  43405406 actcaatttttaacacgctctttgtcactcactcttttattgaatgaaatcaatgtatgtctcaccactttgtatatgttctatttccaaagtgtagacc 43405505  T
Q  152 cacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    |||||| ||||||| |||||||||||||| ||| |||| |||||||    
T  43405506 cacaatgatttaaatcaataagagagtgaatatcagagggagtgtt 43405551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 28434973 - 28434846
Alignment:
Q  62 caacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatt 161  Q
    |||||||||||||| |||| | | ||| ||||||| |||||||  ||||||||||||||  ||||  |||||||||| ||||| |||||||||||| |||    
T  28434973 caacactctctctaacactaattcttttattggataaaatcaatatatgtcccaccact--gtgttggttcaattttcaaagtttagacccacaatgatt 28434876  T
Q  162 taaaccaataagagagtgagtattagagag 191  Q
    ||||||||||||| | ||||||||||||||    
T  28434875 taaaccaataagaaaatgagtattagagag 28434846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 14553573 - 14553665
Alignment:
Q  100 atcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagaga 192  Q
    ||||| |||||||| |||| |||  ||  ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  14553573 atcaatgtatgtcctaccattttacgttggttcaatttttaaagtgtagacccacaataaattaaaccaacaagagagtgagtattagagaga 14553665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 40971622 - 40971458
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-g 148  Q
    |||||| ||||| | |||||||||||||||||||| ||| ||||  ||||||||| ||||||||||||||||| ||||||||  ||||  |||||||| |    
T  40971622 acactctcttttgagcactctctctagcactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtaagtttcatttccaaagtgtagg 40971523  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     |  ||| | |||| | ||||||| | ||||||| ||||| ||||||||||||||| ||||||||    
T  40971522 tcttacattgattttacccaataaaatagtgagtgttagatagagtgttcaaaagagagtgttgc 40971458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 212
Target Start/End: Complemental strand, 1923717 - 1923559
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||||| |||||  ||| ||||  |||||| ||| |||| ||  || ||||||| ||||||||||||| |||||||||||||||||||||    |    
T  1923717 tcacttttcaatactctacctaccactttcttttttattagatgcaaagaatgtatgtcacaccactttgtgtgagttcaatttttaaagtgtagtttta 1923618  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    |||| |||||||||||||||| | |||||||||||||   ||||||||| | |||||||    
T  1923617 caatgatttaaaccaataagataatgagtattagagatgatgttcaaaaaagagtgttg 1923559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 212
Target Start/End: Complemental strand, 36338050 - 36337894
Alignment:
Q  59 tttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaata 158  Q
    |||||||||||  | ||||||||| | ||| ||| |||||||| || ||||||||||  | |||||||| |||||||||  ||||||||||||||||||     
T  36338050 tttcaacactcattttagcactcattattttatttgatgaaattaatgtatgtcccataattttgtgtatgttcaatttccaaagtgtagacccacaatg 36337951  T
Q  159 atttaaaccaataagaga---gtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    |||||||||||||| | |     | |||||||||||||||||||||||| |||||||    
T  36337950 atttaaaccaataaaaaaaataagtgtattagagagagtgttcaaaagatagtgttg 36337894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 28090353 - 28090251
Alignment:
Q  95 atgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagt 194  Q
    ||||||||||   ||||||||||||||||||| ||||||||||| ||||| |||| | ||||| |||||||||||||| ||||||| ||||| | |||||    
T  28090353 atgaaatcaattcatgtcccaccactttgtgtgagttcaattttcaaagtttagatcaacaatgatttaaaccaataaaagagtgaatattacatagagt 28090254  T
Q  195 gtt 197  Q
    |||    
T  28090253 gtt 28090251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 34480079 - 34479982
Alignment:
Q  91 ttggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattaga 188  Q
    ||||||||||||||  ||| || ||||| ||||||| | |||||||||||||||| ||||||||||||||||||| | |||||||| | |||||||||    
T  34480079 ttggatgaaatcaatatatatctcaccattttgtgtgaattcaatttttaaagtgcagacccacaataatttaaatcgataagagattaagtattaga 34479982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 17435016 - 17434856
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||| ||||||||||||||||| ||  ||||||||||  ||||||| |||  ||  ||||| | || | ||||| | ||||| |||| |||||||||||    
T  17435016 acacttacttttcaacactctctttattactcactttt--attggattaaacaaatatatgttctactattttgtatgagttctatttctaaagtgtaga 17434919  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||| | |||||||||||||| |||||||  |||||||||| |||| |||||| ||||||||    
T  17434918 cccacattgatttaaaccaataaaagagtgaacattagagaga-tgtttaaaagagagtgttgc 17434856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 42224760 - 42224596
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-g 148  Q
    |||||| ||||| | |||||||||||||||||||| ||| ||| | ||||||||| ||||||||||||||||| |||  |||| ||||  |||||||| |    
T  42224760 acactctcttttgagcactctctctagcactcactcttttattaggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtagg 42224661  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     || ||| | |||| | ||||||| |||||||||  | ||||||||  |||||||| ||||||||    
T  42224660 tcctacattgatttcacccaataaaagagtgagtgctggagagagttctcaaaagagagtgttgc 42224596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 204
Target Start/End: Complemental strand, 28223945 - 28223791
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||||||  || || |||| | | ||| |||| ||||||| |  |||||| |  | | |||||||  | |||||||| ||||| ||||    
T  28223945 acactcacttttcaacactacctttaacacttattcttttattgaatgaaattattgtatgttcaccaattttgtgtgggctcaattttcaaagtataga 28223846  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |||| ||| |||||||||||||| ||||||||||||||||||  |||||||||||    
T  28223845 cccataatgatttaaaccaataaaagagtgagtattagagaggatgttcaaaaga 28223791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 10950109 - 10950238
Alignment:
Q  62 caacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatt 161  Q
    ||||||||||| |  |||| ||| |||||||| |||||||||| ||||||||||||| ||||| |   ||| ||||| ||||| ||||| || ||| |||    
T  10950109 caacactctctttctcacttactctttcattgaatgaaatcaatgtatgtcccaccattttgtatggattctattttcaaagtatagactcataatgatt 10950208  T
Q  162 taaaccaataagagagtgagtattagagag 191  Q
    ||||| ||||||||| ||| ||||||||||    
T  10950209 taaactaataagagaatgaatattagagag 10950238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 204
Target Start/End: Original strand, 25919266 - 25919376
Alignment:
Q  94 gatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagag 193  Q
    |||||||||||  |||||| ||||| |||||||  | |||||||| ||||||||||| |||||| |||||||||||||| | | ||| ||||| ||| ||    
T  25919266 gatgaaatcaatatatgtctcaccattttgtgtgggatcaattttcaaagtgtagactcacaatgatttaaaccaataaaaaaatgaatattaaagaaag 25919365  T
Q  194 tgttcaaaaga 204  Q
    | |||||||||    
T  25919366 tattcaaaaga 25919376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 186
Target Start/End: Original strand, 2525585 - 2525721
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| |||| |||||||||| || |||||  ||||| ||||||||||||||| |||| |  ||||||||||||| | |||  |||| |||||||| |    
T  2525585 acactcattttttaacactctctttaacactcgtttttttattggatgaaatcaatgtatctatcaccactttgtgtgatttctgttttcaaagtgtaaa 2525684  T
Q  150 cccacaataatttaaaccaataagagagtgagtatta 186  Q
      || ||| |||||||  ||||||||||||| |||||    
T  2525685 tacataatgatttaaattaataagagagtgaatatta 2525721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 194
Target Start/End: Complemental strand, 10666801 - 10666713
Alignment:
Q  106 gtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagt 194  Q
    |||| ||| |||||||| |||  |||| ||||||||| ||||||| |||| |||||||||||||||||||||||| | ||| |||||||    
T  10666801 gtatatcctaccactttatgtgggttccatttttaaattgtagactcacattaatttaaaccaataagagagtgaatgttaaagagagt 10666713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 17568855 - 17568707
Alignment:
Q  66 actctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataatttaa 164  Q
    |||||| |||||||||||| ||| ||||  |||||||||  ||||||||||||||||  ||| |||| ||||  |||||||| | || ||| |||||| |    
T  17568855 actctccctagcactcactcttttattgagtgaaatcaatttatgtcccaccactttaggtaggttctatttccaaagtgtaggtcctacattaatttca 17568756  T
Q  165 accaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     ||||||| |||||| ||  ||| ||||||| |||||||| ||||||||    
T  17568755 tccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgc 17568707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 25630824 - 25630948
Alignment:
Q  56 acttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccaca 155  Q
    ||||||||||||||||| || || | ||| ||| |||  || |||| || |||| |||||| | ||||| || |||||||||| |||||||||||||||     
T  25630824 acttttcaacactctctttaacatttactattttatttaataaaattaatgtatatcccactattttgtataggttcaattttcaaagtgtagacccacg 25630923  T
Q  156 ataatttaaaccaataagagagtga 180  Q
    || |||||||||||| ||| |||||    
T  25630924 atgatttaaaccaattagaaagtga 25630948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 213
Target Start/End: Original strand, 32401136 - 32401292
Alignment:
Q  58 ttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag-acccacaa 156  Q
    |||||||||||||||| | |||| ||| | | ||||  |||||| || |||| | |||||||||| |||  |||| ||||| |||  |||| | |||||     
T  32401136 ttttcaacactctctcaaacacttactctcttattgagtgaaattaatgtatattccaccactttatgtgggttccattttaaaaacgtaggatccacat 32401235  T
Q  157 taatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||||  |||  | |||||||||||||||||||||||||||||||| |||||||    
T  32401236 taatttaagtcaactaaagagtgagtattagagagagtgttcaaaagaaggtgttgc 32401292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 4714764 - 4714923
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    |||||||| ||| |||| | || || ||||||||| ||||||| |||| |  || ||||||| || |||||||  |||| ||||| ||| ||||||  ||    
T  4714764 tcacttttgaaccctctttttaacattcacttttttattggattaaattattgtgtgtcccatcattttgtgtgggttctattttcaaaatgtagataca 4714863  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||| ||||| |||||||| ||||    ||||||||||| ||||||||||| ||||||||    
T  4714864 caatgatttataccaataaaagagaacatattagagagaatgttcaaaagagagtgttgc 4714923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 31885960 - 31885878
Alignment:
Q  90 attggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataa 172  Q
    ||||||||||| ||| | ||||||||||| ||| || | |||||||||| |||||||||| | ||||| ||||||||||||||    
T  31885960 attggatgaaaacaatggatgtcccaccattttctggaggttcaattttcaaagtgtagatctacaatgatttaaaccaataa 31885878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 2935445 - 2935494
Alignment:
Q  155 aataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  2935445 aataatttaaaccaataaaagagtgagtattagagaaattgttcaaaaga 2935494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 12076133 - 12076068
Alignment:
Q  148 gacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| | |||||| ||||| ||||||||||||||||| | ||||||||||||| ||||||||    
T  12076133 gacccacattgatttaagccaattagagagtgagtattagataaagtgttcaaaagagagtgttgc 12076068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 32309490 - 32309562
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactt 121  Q
    ||||||| |||||||||| ||||||||||||||||| | | ||||||| |||| || |||||||| |||||||    
T  32309490 gacactctcttttcaacattctctctagcactcactctcttattggataaaattaatgtatgtccgaccactt 32309562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 5465725 - 5465658
Alignment:
Q  146 tagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| ||| |||||||||||||||||||||| ||||||| | |||||||||  || ||||||||    
T  5465725 tagacccataatgatttaaaccaataagagagtgaatattagaaaaagtgttcaatggagagtgttgc 5465658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 32050479 - 32050413
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccac 116  Q
    |||||| ||||| | || ||||||||||||||||||||| ||||| ||||||||| |||||| ||||    
T  32050479 acactctcttttgagcattctctctagcactcacttttttattgggtgaaatcaatgtatgttccac 32050413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 1649560 - 1649621
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatg 110  Q
    ||||||| ||||||||||||||||||| |||||||| | | |||||||||||| || |||||    
T  1649560 gacactctcttttcaacactctctctaacactcactatcttattggatgaaattaatgtatg 1649621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 10253232 - 10253164
Alignment:
Q  69 ctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaattt 137  Q
    ||||||| |||||||| ||  |||||||||||| || ||||||||||||||||| ||| ||||| ||||    
T  10253232 ctctctaacactcactcttctattggatgaaattaatgtatgtcccaccactttatgtgagttctattt 10253164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 4959333 - 4959286
Alignment:
Q  166 ccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||| |||||| ||||||||||||||| |||||||| ||||||||    
T  4959333 ccaataaaagagtgggtattagagagagtgctcaaaagagagtgttgc 4959286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 24990924 - 24991039
Alignment:
Q  77 cactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataatttaaaccaataagag 175  Q
    ||||| || ||| ||||| |||||||||  |||||||||||||||| |||| |||| ||||| |||||||| | || ||| | |||| | ||||||| ||    
T  24990924 cactcgctcttttattgggtgaaatcaatatatgtcccaccactttatgtaggttccattttcaaagtgtatgtcctacattgatttcacccaataaaag 24991023  T
Q  176 agtgagtattagagag 191  Q
    |||||||  |||||||    
T  24991024 agtgagtgctagagag 24991039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 25002077 - 25002014
Alignment:
Q  147 agacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    |||||||| || |||||||||||| ||| ||||||| || ||||||||||| |||||| |||||    
T  25002077 agacccactatgatttaaaccaattagaaagtgagtgttggagagagtgttgaaaagagagtgt 25002014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 1649614 - 1649561
Alignment:
Q  157 taatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    |||||| | ||||||||| ||||||| |||||||||||||| |||||| |||||    
T  1649614 taatttcatccaataagatagtgagtgttagagagagtgttgaaaagagagtgt 1649561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 43541871 - 43541956
Alignment:
Q  59 tttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagt 144  Q
    |||||||||||||| ||  |||  || ||| |||| || ||||||| ||||||| || |||||||||| ||||||||||| |||||    
T  43541871 tttcaacactctctttaatacttcctcttttattgaataaaatcaatgtatgtctcatcactttgtgtgagttcaattttcaaagt 43541956  T

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Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 6263894 - 6263966
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    |||||| ||||| | ||||||||||| ||||||||  || ||||| | |||||||  ||||||||||||||||    
T  6263894 acactctcttttgagcactctctctatcactcactcctttattgggtaaaatcaatatatgtcccaccacttt 6263966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 41452064 - 41451901
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||||  ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||    
T  41452064 acactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagtaga 41451965  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41451964 cccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgc 41451901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 24734716 - 24734879
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||||  ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||     
T  24734716 acactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagtagg 24734815  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24734816 cccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgc 24734879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 50 - 212
Target Start/End: Original strand, 28529264 - 28529424
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||   |||||||||| ||||||||||    
T  28529264 acactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactgtgtgg--gttcaattttcaaagtgtaga 28529361  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  28529362 cccacaatgatttaaaccaataagagagtgagtattagagagggtgttcaaaagagagtgttg 28529424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 50 - 212
Target Start/End: Complemental strand, 20493614 - 20493452
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||||||||||||| ||||||||  || ||||||||||||||| |||||||| |||||||||||   ||||||| || ||||||||||    
T  20493614 acactcacttttcaacactctctctaacactcactcatttattggatgaaatcaatgtatgtcctaccactttgtgggggttcaatattcaaagtgtaga 20493515  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  20493514 cccacaatgatttaaaccaataagagagtgagtaatagagagagtgttcaaaagagagtgttg 20493452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 52124125 - 52123962
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| ||| ||||||||||||||||||| ||  ||||||||||| || ||||||||||| | ||||||   |||||||||| ||||||||||    
T  52124125 acactcactttttaacgctctctctagcactcacttatttgttggatgaaattaatgtatgtcccactattttgtgggggttcaattttcaaagtgtaga 52124026  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  52124025 cccacaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgttgc 52123962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 37776872 - 37776709
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||||| |||| |||||||||| ||| ||| ||||||||||| |||||||| ||||||||||||  |||||||||| ||||||||||    
T  37776872 acactcacttttcaacactttctccagcactcactcttttattagatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtaga 37776773  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    || ||||| |||||||||| |||||||||||||||||||||| ||||||| || | ||||||||    
T  37776772 cctacaatgatttaaaccactaagagagtgagtattagagagggtgttcataaaagagtgttgc 37776709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 20791311 - 20791466
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||  ||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||  ||||| ||||  |||||||||| ||     
T  20791311 tcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccg 20791410  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtg 209  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  20791411 caatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtg 20791466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 50 - 191
Target Start/End: Complemental strand, 10948729 - 10948588
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||||| |||| ||||||||||| || |||||| || || || |||||| ||||||||||||||  ||||||||||||||||||| |    
T  10948729 acactcacttttcaacactttctcaagcactcacttctttattggacgatattaatgtatgttccaccactttgtgtttgttcaatttttaaagtgtaaa 10948630  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagag 191  Q
    |||||||| |||||||||||||| ||||||||||||| ||||    
T  10948629 cccacaatgatttaaaccaataaaagagtgagtattaaagag 10948588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 46450078 - 46450224
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt-gtgtaagttcaatttttaaagtgtag 148  Q
    |||||||||||| ||||||||||  |||||||||| ||| ||| |||| |||||| ||||||||||||||||| ||||  |||| ||||  |||||||||    
T  46450078 acactcacttttgaacactctct--agcactcactcttttattagatggaatcaatgtatgtcccaccacttttgtgtgggttctatttgcaaagtgtag 46450175  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  46450176 acccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 46450224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 5452229 - 5452068
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||||||||| || || ||||| ||| ||||||||||||||| |||| ||||||||||||||||   |||||||||  |||||||||    
T  5452229 acactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatttcccaccactttgtgtggattcaattttctaagtgtaga 5452130  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||  |||  ||||||| ||||||||||| ||||||| |||||||||||||||||| ||||||||    
T  5452129 cc--caaggatttaaatcaataagagagcgagtattggagagagtgttcaaaagagagtgttgc 5452068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 77 - 200
Target Start/End: Complemental strand, 18427292 - 18427169
Alignment:
Q  77 cactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagaga 176  Q
    ||||||||  || ||||||||||||||| ||||||||||||| |||||||  |||| ||||| |||||||||||||||||| ||||||||||||||||||    
T  18427292 cactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgtgggttctattttcaaagtgtagacccacaatgatttaaaccaataagaga 18427193  T
Q  177 gtgagtattagagagagtgttcaa 200  Q
    ||||||||||||||| ||||||||    
T  18427192 gtgagtattagagagggtgttcaa 18427169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 213
Target Start/End: Original strand, 14236044 - 14236193
Alignment:
Q  64 acactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataattta 163  Q
    ||||||||| ||||||||||| ||| |||||||||||||||  |||||||||||||||| ||  ||||| ||||  |||||||||| |||||||||||||    
T  14236044 acactctctttagcactcactattttattggatgaaatcaatatatgtcccaccactttatgcgagttctatttccaaagtgtagatccacaataattta 14236143  T
Q  164 aaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     |||||||| | ||||||||||||| ||||||||||||| | ||||||||    
T  14236144 gaccaataaaaaagtgagtattagaaagagtgttcaaaacagagtgttgc 14236193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 202
Target Start/End: Complemental strand, 8825148 - 8824996
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||  ||||||||| ||||||  ||| ||| |||||||||||  |||||||||||| ||| ||   |||||||||| ||||| || |    
T  8825148 acactcacttttcaaccatctctctagtactcacccttttattagatgaaatcaatatatgtcccaccattttatgcgggttcaattttcaaagtctaca 8825049  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaa 202  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8825048 ctcacaataatttaaaccaataagagagtgagtattaaagagagtgttcaaaa 8824996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 27243056 - 27243220
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-g 148  Q
    |||||| ||||| ||||||||||||| |||||||| ||| ||||||| ||||||| | ||||||||||||||| |||  |||| ||||  |||||||| |    
T  27243056 acactctcttttgaacactctctctaacactcactcttttattggataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaagtgtatg 27243155  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||| | |||||| ||||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  27243156 acccacattgatttaacccaatgagagagtgagtattagaaagagtgttcaaaagagagtgttgc 27243220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 46160960 - 46161117
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| ||||||||  |||||||||||| ||| |||||||||||||||   |||||| ||||||||||||  |||| ||||  ||||||||||    
T  46160960 acactcacttttgaacactct--ctagcactcactcttttattggatgaaatcaatacatgtccgaccactttgtgttggttctatttccaaagtgtaga 46161057  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtg 209  Q
     ||| ||| |||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  46161058 tccataatgatttaaaccaataagagagtgagtattagagagagtgtccaagagagagtg 46161117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 170
Target Start/End: Complemental strand, 26310611 - 26310495
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||||||||| ||||||||||||| ||| |||  |||||||||| ||||||||||||||    
T  26310611 tcacttttcaacactctctctagcacttactcttttattggatgaaatcaatgtatgtcccaccattttttgttggttcaattttcaaagtgtagaccca 26310512  T
Q  154 caataatttaaaccaat 170  Q
     ||| ||||||||||||    
T  26310511 taatgatttaaaccaat 26310495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 210
Target Start/End: Complemental strand, 50156827 - 50156669
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||||| ||||     ||| |||| || |||| ||||||| || |||||| |||| |||||| |   |||||||||| ||||||||||    
T  50156827 acactcacttttcaacacactctgat--acttacttatttattgaatgaaattaatgtatgttccacaactttgcgggggttcaattttaaaagtgtaga 50156730  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  50156729 cccacaatgatttaaaccaataagagagtgagtattacaaagagtgttcaaaagaaagtgt 50156669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 54 - 202
Target Start/End: Complemental strand, 41707604 - 41707457
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    |||||||| | ||||||||||| |||||||| | ||||||||| ||||||| ||||||  || ||||||||||  |||||||||||||||| ||||||||    
T  41707604 tcacttttgagcactctctctaacactcactctctcattggataaaatcaatgtatgtttcatcactttgtgtgggttcaatttttaaagtatagaccca 41707505  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaa 202  Q
    |||||||||||||| |||||| | | ||| ||| |||||||||||||||    
T  41707504 caataatttaaacc-ataagaaaataagtgttaaagagagtgttcaaaa 41707457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 29588862 - 29588748
Alignment:
Q  90 attggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagag 189  Q
    ||||||| ||||||| ||||||||   |||||| ||| ||||||||||| |||||||||||||||||| ||||||| |||||||||||||||| ||| ||    
T  29588862 attggataaaatcaatgtatgtcctttcactttatgtgagttcaattttcaaagtgtagacccacaatgatttaaatcaataagagagtgagtgttatag 29588763  T
Q  190 agagtgttcaaaaga 204  Q
    |||||||||||||||    
T  29588762 agagtgttcaaaaga 29588748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 204
Target Start/End: Original strand, 38414678 - 38414812
Alignment:
Q  70 tctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaa 169  Q
    |||||| || ||||| | ||||| ||| | ||||| ||||||||||||| |||||||  ||| ||||||||||||||||| |||| ||||||||||||||    
T  38414678 tctctaacagtcactctctcattagataagatcaatgtatgtcccaccattttgtgtgggtttaatttttaaagtgtagatccacgataatttaaaccaa 38414777  T
Q  170 taagagagtgagtattagagagagtgttcaaaaga 204  Q
    ||||||||||||| ||| ||||| || ||||||||    
T  38414778 taagagagtgagtgttaaagagaatgctcaaaaga 38414812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 55452182 - 55452037
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| ||||||||||   | ||||||| ||| |||||||| |||  | |||||||||||||||||||||  |||| ||||  ||||||||||    
T  55452182 acactcacttttgaacactctctg--gtactcactcttttattggatggaatacatgtatgtcccaccactttgtgtgggttctatttccaaagtgtaga 55452085  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    | || ||| |||||||||||| | ||||||||||||||||||||||||    
T  55452084 ctcataatgatttaaaccaatgaaagagtgagtattagagagagtgtt 55452037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 208
Target Start/End: Complemental strand, 45515661 - 45515508
Alignment:
Q  53 ctcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccc 152  Q
    ||||||||| ||||||||||| | |||||||| ||| ||||||||||||||| |||| ||||| |||   |||| ||||||||||| ||||||||||||     
T  45515661 ctcactttttaacactctctccaacactcactattttattggatgaaatcaatgtatatcccatcacagagtgtgagttcaattttcaaagtgtagacct 45515562  T
Q  153 acaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagt 208  Q
    |  || |||| ||||||||||||||||| ||||||||||  | |||||||||||||    
T  45515561 a-tatgattt-aaccaataagagagtgaatattagagaggttattcaaaagaaagt 45515508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 213
Target Start/End: Complemental strand, 15790536 - 15790376
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacc 151  Q
    ||||||||||||||||| | |||| |||| |||| || ||||||| ||||||| ||||||| ||||| ||| ||   |  ||||||| ||||||||| ||    
T  15790536 actcacttttcaacactttttctaacacttacttatttattggataaaatcaatgtatgtctcaccattttatggtgggacaattttcaaagtgtaggcc 15790437  T
Q  152 cacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     | ||| |||||||||||||||||||||||||||||||||| | ||||||| | ||||||||    
T  15790436 -ataatgatttaaaccaataagagagtgagtattagagagattattcaaaaaagagtgttgc 15790376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 211
Target Start/End: Original strand, 29755511 - 29755672
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||| ||||| || ||| |||| ||| || | ||  ||||||  |||||  ||| |||||||||  |||||||||| ||||||||||    
T  29755511 acactcacttttcaacattctctttaacacccactcttttatcgaatagaatcaatatatgtttcactactttgtgtgggttcaattttcaaagtgtaga 29755610  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgtt 211  Q
     | ||||| ||||||||||||||||| ||  ||||||||| |||||||||||||| ||||||    
T  29755611 tcaacaatgatttaaaccaataagagggtaggtattagagggagtgttcaaaagagagtgtt 29755672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 37600299 - 37600135
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||| ||||| | ||||||||||||||| |||| ||| ||||| ||||||||| ||||||||||||||||| |||  |||| |||| ||||||||||     
T  37600299 acactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtagg 37600200  T
Q  150 ccc-acaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     || ||| | | || ||||||||| |||||| ||  ||||||||||| |||||||| ||||||||    
T  37600199 tcctacattgaattcaaccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgc 37600135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 22604571 - 22604710
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||| |||||| || ||||||| || ||||||||  || ||||||| |||| || ||||||||||||| ||||||  ||||||||||| ||| ||||||    
T  22604571 acacttactttttaatactctctttaacactcactcatttattggataaaattaatgtatgtcccaccattttgtgggagttcaattttcaaaatgtaga 22604670  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagag 189  Q
    | |||||| ||||||||  ||||||||||||| |||||||    
T  22604671 ctcacaatgatttaaacttataagagagtgagaattagag 22604710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 204
Target Start/End: Original strand, 48351447 - 48351601
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| |||| |||||||||| ||  || |||| ||| ||||||| |||||||  |||||| ||| |||||||||  |||||||||| |||||||| |    
T  48351447 acactcagtttttaacactctctttaagacacactcttttattggataaaatcaatatatgtctcactactttgtgtgggttcaattttcaaagtgtata 48351546  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
     ||| ||| ||||||| ||||||||||  |||||||||||| | |||||||||||    
T  48351547 tccataatgatttaaatcaataagagaaagagtattagagaaaatgttcaaaaga 48351601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 2419593 - 2419481
Alignment:
Q  90 attggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagag 189  Q
    |||||||| |||||| | |||||| |||||||||  | ||||| ||||  || ||||||||||||||| |||||||||||||||| ||||||||||| ||    
T  2419593 attggatggaatcaatgcatgtcctaccactttgcatgagttctatttccaatgtgtagacccacaatgatttaaaccaataagaaagtgagtattaaag 2419494  T
Q  190 agagtgttcaaaa 202  Q
    | |||||||||||    
T  2419493 aaagtgttcaaaa 2419481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 186
Target Start/End: Complemental strand, 40716031 - 40715895
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||||||||||||||||||||| ||| ||  | |||||| || ||||| | || ||||||||||  |||||||||||||| ||| ||    
T  40716031 acactcacttttcaacactctctctagcactcactcttttatatggtgaaattaatgtatgactcatcactttgtgtgggttcaatttttaaaatgttga 40715932  T
Q  150 cccacaataatttaaaccaataagagagtgagtatta 186  Q
    |  ||||| |||||||| |||| |||| ||| |||||    
T  40715931 catacaatgatttaaactaataggagattgaatatta 40715895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 204
Target Start/End: Original strand, 46575959 - 46576114
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-g 148  Q
    |||||| || |||||||||||||| | |||||||| | | ||||| ||||| ||| ||||||||||||||||| |||  |||| ||||| ||| |||| |    
T  46575959 acactctctcttcaacactctctcaaacactcactctcttattggctgaaaccaatgtatgtcccaccactttttgtgggttccattttcaaaatgtacg 46576058  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
     |||||| | |||||| || || ||||||||||||||| |||||||||| ||||||    
T  46576059 ccccacattgatttaaccctattagagagtgagtattaaagagagtgttgaaaaga 46576114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 752461 - 752539
Alignment:
Q  108 atgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 186  Q
    |||||||||||||||||||  |||| |||| ||||||||||||||||||| |||||||| ||||||||| |||||||||    
T  752461 atgtcccaccactttgtgtgggttctatttctaaagtgtagacccacaatgatttaaactaataagagaatgagtatta 752539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 43016440 - 43016585
Alignment:
Q  68 tctctctagcactcactttttcattggatgaaatcaaagtat--gtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaa 165  Q
    |||||||| || ||||||||| |||  |||||||||| ||||  ||| ||| ||| ||||| ||||||||||||||||| ||||  || ||| |||||||    
T  43016440 tctctctaacattcacttttttattaaatgaaatcaatgtatatgtcgcactactctgtgttagttcaatttttaaagtatagattcataatgatttaaa 43016539  T
Q  166 ccaataagagagtgagtattagagagagtgttcaaaagaaagtgtt 211  Q
     |||||||||||||||||||| || | |||||||||| | ||||||    
T  43016540 tcaataagagagtgagtattacagtgggtgttcaaaatagagtgtt 43016585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 19345129 - 19345032
Alignment:
Q  90 attggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattag 187  Q
    ||||||||||||||| |||||||||||||||||||    |||||||||| ||| ||||||| |||||| |||||||||||||| ||| | ||||||||    
T  19345129 attggatgaaatcaatgtatgtcccaccactttgttggggttcaattttcaaattgtagactcacaatgatttaaaccaataaaagaataagtattag 19345032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 24429115 - 24429050
Alignment:
Q  129 gttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagt 194  Q
    ||||||||||||||||||||| ||||||| |||||||||||||| | |||||||||||||||||||    
T  24429115 gttcaatttttaaagtgtagatccacaatgatttaaaccaataaaatagtgagtattagagagagt 24429050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 138793 - 138921
Alignment:
Q  69 ctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaacca 168  Q
    |||||||||||||||| ||| |||| |||||||||| ||||||| ||||| ||||| |   ||||||||||||| |||| ||  ||||| ||||||| ||    
T  138793 ctctctagcactcactcttttattgaatgaaatcaatgtatgtctcaccattttgtatgtattcaatttttaaaatgtaaacttacaatgatttaaatca 138892  T
Q  169 ataagagagtgagtattagagagagtgtt 197  Q
    |||| ||||| ||||||| |||| |||||    
T  138893 ataaaagagtaagtattaaagagggtgtt 138921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 41387591 - 41387719
Alignment:
Q  69 ctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaacca 168  Q
    ||||||||||||||||  || ||||||| ||||| | |||| || ||| | |||||||  ||| |||||| |||||| ||||||||||| |||||| | |    
T  41387591 ctctctagcactcactcatttattggattaaatcgatgtatatcacactattttgtgtgggtttaattttcaaagtgcagacccacaatgatttaatcaa 41387690  T
Q  169 ataagagagtgagtattagagagagtgtt 197  Q
    |||||||| |||||||| |||||||||||    
T  41387691 ataagagattgagtattggagagagtgtt 41387719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 44844048 - 44844156
Alignment:
Q  106 gtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    ||||||||||||| ||  ||| |||||||||||||||||||| |||||||||| |||||| ||||||| | ||||||| |||||||||||||  ||||||    
T  44844048 gtatgtcccaccatttcatgtgagttcaatttttaaagtgtatgacccacaatgatttaatccaataaaaaagtgagtgttagagagagtgtcaaaaaga 44844147  T
Q  205 aagtgttgc 213  Q
     ||| ||||    
T  44844148 gagtcttgc 44844156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 742025 - 742103
Alignment:
Q  108 atgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 186  Q
    |||||||||||||||||||   ||| |||| ||||||||||||||||||| |||||||| ||||||||| |||||||||    
T  742025 atgtcccaccactttgtgtggattctatttctaaagtgtagacccacaatgatttaaactaataagagaatgagtatta 742103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 46237215 - 46237117
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag 148  Q
    |||||| ||||| | |||||||||||||| ||||| ||| ||||||||||||||| ||||||||||||||||| |||  |||| |||| |||| |||||    
T  46237215 acactctcttttgagcactctctctagcaatcactcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaaatgtag 46237117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 49072044 - 49072138
Alignment:
Q  78 actcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataa 172  Q
    ||||||| || | ||||||||||| ||  |||||| ||||||||||| | ||||  ||||| |||||||||||||||||||||||||||||||||    
T  49072044 actcactcttccgttggatgaaattaatttatgtctcaccactttgtatgagttatattttcaaagtgtagacccacaataatttaaaccaataa 49072138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 24749072 - 24748915
Alignment:
Q  57 cttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccc-aca 155  Q
    ||||| ||| ||||||||| |||||| | ||| || || ||| ||||| ||||||||||||| ||| |||  |||| |||| ||||||||||  || |||    
T  24749072 cttttgaacgctctctctaacactcattcttttatggggtgatatcaatgtatgtcccaccattttatgtgggttccatttctaaagtgtaggtcctaca 24748973  T
Q  156 ataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     | |||| | ||||||| ||||||||| |||||||||||| |||||||| ||||||||    
T  24748972 ttgatttcatccaataaaagagtgagtgttagagagagtgctcaaaagagagtgttgc 24748915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 29388684 - 29388611
Alignment:
Q  129 gttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaa 202  Q
    |||||||||| ||||||||||| |||||| ||||||  ||||||||||||| || |||||||||||||||||||    
T  29388684 gttcaattttcaaagtgtagactcacaatgatttaagtcaataagagagtgggtgttagagagagtgttcaaaa 29388611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 37285318 - 37285435
Alignment:
Q  74 tagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataag 173  Q
    |||||||||||||||  || ||||||||  | ||||||| ||||| ||| | |  |||  |||||||||||| ||||||||||||||||||||||||||     
T  37285318 tagcactcacttttttgttagatgaaattcatgtatgtcgcaccattttttatgggttttatttttaaagtgcagacccacaataatttaaaccaataaa 37285417  T
Q  174 agagtgagtattagagag 191  Q
    | ||| ||||||||||||    
T  37285418 aaagtaagtattagagag 37285435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 40702289 - 40702128
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||||||||||  |||||| ||| ||| ||  |||||||| || |||||  ||| |||||| |||  |||||||||||||||| | ||    
T  40702289 acactcacttttcaacactctct--agcacttactcttttatatgatgaaattaatgtatgatccatcactttatgtgggttcaatttttaaagttttga 40702192  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     ||||| |||||||||||| ||| |   ||| |||||||||  || ||||||||| ||||||||    
T  40702191 tccacagtaatttaaaccattaaaaatttgaatattagagaatgtattcaaaagagagtgttgc 40702128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 204
Target Start/End: Original strand, 2009009 - 2009159
Alignment:
Q  53 ctcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccc 152  Q
    ||||||||| ||| |||||| ||   |||||| ||| ||  |||||||| || |||||||| |||||||| ||||  |||| |||||||||||||||| |    
T  2009009 ctcactttttaaccctctctttattgctcactcttttatcagatgaaattaatgtatgtcc-accactttatgtagtttcagtttttaaagtgtagactc 2009107  T
Q  153 acaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    ||||||||||||| |||||| | | ||| ||||||||||  |||| ||||||    
T  2009108 acaataatttaaatcaataaaaaaatgaatattagagaggatgtttaaaaga 2009159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 148
Target Start/End: Complemental strand, 43657150 - 43657067
Alignment:
Q  65 cactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag 148  Q
    |||| ||||||||||||||| ||| ||| ||||||||||| ||||||||||||||||| ||| ||||| ||||  |||||||||    
T  43657150 cactttctctagcactcactattttatttgatgaaatcaatgtatgtcccaccactttatgtgagttccatttccaaagtgtag 43657067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 38138695 - 38138589
Alignment:
Q  106 gtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaa 205  Q
    |||| |||||||| ||||||||  ||| || || ||||| |||| ||||||| |||||||||||||||||||| ||||||| | | |||| ||||||||     
T  38138695 gtatatcccaccattttgtgtagtttctatcttcaaagtatagatccacaatgatttaaaccaataagagagtaagtattaaataaagtgatcaaaagag 38138596  T
Q  206 agtgttg 212  Q
    |||||||    
T  38138595 agtgttg 38138589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 54141047 - 54140898
Alignment:
Q  65 cactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataattta 163  Q
    ||||||||||||||||||||  || ||||| ||||||||| |||||||||||||||||  ||  |||| ||||| |||||||| |  | ||| | ||||     
T  54141047 cactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccaccactttacgtgggttccattttcaaagtgtaggttctacattgatttc 54140948  T
Q  164 aaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    | |||||||  ||||||||  |||||| |||| |||||||| ||||||||    
T  54140947 atccaataaatgagtgagtgctagagaaagtgctcaaaagagagtgttgc 54140898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 20586964 - 20586885
Alignment:
Q  106 gtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 185  Q
    |||||| |||||||||| |||| ||| | |||||||||| || | | |||||||||||||||||||| ||||||||||||    
T  20586964 gtatgttccaccactttatgtatgtttagtttttaaagtatatatcaacaataatttaaaccaataaaagagtgagtatt 20586885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 52951529 - 52951474
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaa 105  Q
    |||||| ||||| |||||||||||||||||||||| | ||||||||||||||||||    
T  52951529 acactctctttttaacactctctctagcactcactctctcattggatgaaatcaaa 52951474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 29389182 - 29389108
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgt 124  Q
    |||||||||||| | ||||| || || |||||||| |||||||| || ||||||| |||||||||||||||||||    
T  29389182 acactcacttttgagcactcactttaacactcactctttcattgaataaaatcaatgtatgtcccaccactttgt 29389108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 39186031 - 39186137
Alignment:
Q  106 gtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaa 205  Q
    ||||||| ||||||||| ||  ||||| ||||  |||||||||| |  |||| ||||||| ||||||||||| | ||||| |||||||| |||||||||     
T  39186031 gtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaatcaataagagagagggtattggagagagtattcaaaagag 39186130  T
Q  206 agtgttg 212  Q
    |||||||    
T  39186131 agtgttg 39186137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 49418493 - 49418425
Alignment:
Q  146 tagacccacaataa-tttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| ||||| |||||| |||||||||||||| || |||||||| ||||||||||| ||||||||    
T  49418493 tagacccataataaatttaaatcaataagagagtgaatactagagagaatgttcaaaagagagtgttgc 49418425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 27243100 - 27243053
Alignment:
Q  166 ccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  27243100 ccaataaaagagtgagtgttagagagagtgttcaaaagagagtgttgc 27243053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 172
Target Start/End: Complemental strand, 50661691 - 50661568
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-g 148  Q
    |||||| ||||| ||||||||||||| |||| ||| ||| ||| ||| ||||||| | ||||||||||||||| |||  |||| ||||  ||| |||| |    
T  50661691 acactctcttttaaacactctctctaacacttactcttttattagataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaaatgtatg 50661592  T
Q  149 acccacaataatttaaaccaataa 172  Q
    ||||||| | |||||| |||||||    
T  50661591 acccacattgatttaacccaataa 50661568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 211
Target Start/End: Complemental strand, 10769894 - 10769732
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||| ||||| | ||||||||||| |||  ||| ||| ||| | ||||||||| ||||||||||||||||| | |  |||| |||| ||||||||||     
T  10769894 acactctcttttgagcactctctctatcaccgactcttttatttggtgaaatcaatgtatgtcccaccactttatatgggttccatttctaaagtgtagg 10769795  T
Q  150 ccc-acaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgtt 211  Q
     || ||| | |||| | | ||||| ||||| |||  ||||||||||| |||||||| ||||||    
T  10769794 tcctacattgatttcatcaaataaaagagtaagtgctagagagagtgctcaaaagagagtgtt 10769732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 49720172 - 49720103
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccacca 118  Q
    ||||||||||||||||||||||||| | |||||||||  | ||||||| |||| || |||| ||||||||    
T  49720172 gacactcacttttcaacactctctcaaacactcacttgcttattggattaaatgaatgtatatcccacca 49720103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 13809093 - 13809256
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-g 148  Q
    |||||| |||||  |||||||||||| |  ||||| ||| ||||||| ||||||| ||||||||||||| ||| |||  |||| ||||  ||||| || |    
T  13809093 acactctcttttacacactctctctaact-tcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaagtatatg 13809191  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||| |  ||||| ||||||||||| ||| | ||||||| ||||| ||| | | ||||||||    
T  13809192 acccacattgttttaacccaataagagaatgaatgttagagaaagtgtccaagaaagagtgttgc 13809256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 85
Target Start/End: Complemental strand, 18722625 - 18722590
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactt 85  Q
    ||||||||||||| ||||||||||||||||||||||    
T  18722625 acactcacttttctacactctctctagcactcactt 18722590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 209
Target Start/End: Original strand, 36750955 - 36751106
Alignment:
Q  58 ttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaat 157  Q
    |||| |||||||||  || |||||||| | | | || |||||||||  | |||||| |||||||| |||| |||  |||| |||||||||||| |||| |    
T  36750955 ttttgaacactctcattaacactcactctcttactgaatgaaatcagtgcatgtcctaccactttatgtaggtttcatttctaaagtgtagactcacatt 36751054  T
Q  158 aatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtg 209  Q
     ||| |||| ||||||||||| | | ||||||||| | | ||||||| ||||    
T  36751055 gattaaaactaataagagagtaaatgttagagagattatccaaaagagagtg 36751106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 7640765 - 7640695
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccac 119  Q
    ||||||| ||||||||||||| ||||| ||||  |||| | |||||||||||| || |||||||| |||||    
T  7640765 gacactctcttttcaacactcactctaacacttgctttcttattggatgaaattaatgtatgtcctaccac 7640695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 24748918 - 24748972
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaa 104  Q
    |||||| ||||| | ||||||||||| |||||||| ||| |||||||||||||||    
T  24748918 acactctcttttgagcactctctctaacactcactcttttattggatgaaatcaa 24748972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 147
Target Start/End: Original strand, 30624661 - 30624739
Alignment:
Q  69 ctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta 147  Q
    ||||||| |||||||| ||| |||| || |||| || ||||||  ||||||||||||| ||||||||||| ||| ||||    
T  30624661 ctctctaacactcactcttttattgaataaaattaatgtatgtttcaccactttgtgtgagttcaattttcaaaatgta 30624739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 34918447 - 34918405
Alignment:
Q  171 aagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||    
T  34918447 aagagactgagtattagagagagtgttcaaaataaattgttgc 34918405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 18722579 - 18722535
Alignment:
Q  80 tcactttttcattggatgaaatcaaagtatgtcccaccactttgt 124  Q
    |||||| || ||||||||||||||| ||||||||||||| |||||    
T  18722579 tcacttatttattggatgaaatcaatgtatgtcccaccattttgt 18722535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 28576143 - 28576111
Alignment:
Q  165 accaataagagagtgagtattagagagagtgtt 197  Q
    |||||||||||||| ||||||||||||||||||    
T  28576143 accaataagagagtaagtattagagagagtgtt 28576111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 29235702 - 29235658
Alignment:
Q  166 ccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    ||||||||||||||||| ||||||||||||||  ||||| |||||    
T  29235702 ccaataagagagtgagtgttagagagagtgttagaaagagagtgt 29235658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 54187055 - 54187099
Alignment:
Q  166 ccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    ||||||||||||||||| ||||||||||||||  ||||| |||||    
T  54187055 ccaataagagagtgagtgttagagagagtgttagaaagagagtgt 54187099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 4e-59; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 34905347 - 34905510
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||| |  |||||||||| ||||||||||    
T  34905347 acactcatttttcaacactctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtaga 34905446  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  34905447 cccacaatgatttaaaccaataagagagtgagtattagagagggtgttcaaaagagagtgttgc 34905510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 50 - 204
Target Start/End: Original strand, 5106309 - 5106463
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||| ||||||| |||||||||||||||||||||  | |||||||| |||||||| |    
T  5106309 acactcacttttcaacactttctctaacactcacttttttattggataaaatcaatgtatgtcccaccactttgtgtgggatcaattttcaaagtgtaca 5106408  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |||||||  |||||||||||||| ||||||| |||||||||| ||||||||||||    
T  5106409 cccacaaggatttaaaccaataatagagtgaatattagagagtgtgttcaaaaga 5106463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 52 - 197
Target Start/End: Original strand, 445831 - 445976
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacc 151  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||  |||||||||| ||||| ||||      
T  445831 actcatttttcaacactatctctagcactcacttttttattggatgaaatcaatgtatgtcacaccactttgtgtgggttcaattttcaaagtctagagt 445930  T
Q  152 cacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||    
T  445931 cacaatgatttaaaccaataagagaatgagtattagagagagtgtt 445976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 50 - 212
Target Start/End: Complemental strand, 10133327 - 10133165
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||||||||||||| ||||||||  || |||||||||||| |  ||||||||||||||||| ||   |||||||||| ||||||||||    
T  10133327 acactcacttttcaacactctctctaacactcactcatttattggatgaaattattgtatgtcccaccactttatgggggttcaattttcaaagtgtaga 10133228  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
     ||||||| |||||||||||||| ||||||||||||| || |||| ||||||||| |||||||    
T  10133227 accacaatgatttaaaccaataaaagagtgagtattaaagtgagtattcaaaagagagtgttg 10133165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 1392641 - 1392801
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| ||||||||||  |||||||  ||||| ||||||||||||||| ||||||| ||| ||||||| |  |||||||||||||| |||||     
T  1392641 acactcactttttaacactctct--agcactctattttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag- 1392737  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| |||||||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  1392738 cccacaatgatttaaaccaataagagagtgagtattagatagggtgttcaaaagagagtgttgc 1392801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 31116293 - 31116146
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| ||||||||||||| || ||||| ||  ||||||||||||||| ||||||||||| |||||||||  |||| ||||  || ||||| |    
T  31116293 acactcacttttgaacactctctctaacattcactcttctattggatgaaatcaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaa 31116194  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  31116193 cccacaatgatttaaaccaataagagagtgagtattagagagagtgtt 31116146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 21987307 - 21987457
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||  ||||||||| ||||||||||| ||| ||||||||||||||| |||| |||||||||||| ||  ||||| ||||  |||||||||| ||     
T  21987307 tcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatatcccaccactttatgcgagttctatttccaaagtgtagatccg 21987406  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  21987407 caatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaaga 21987457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 32122806 - 32122953
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||| |||||||||||||| || | ||||||||| || |||||||||||||||  |||||||||||| ||||||  ||||||||||| ||||||||||    
T  32122806 acactctcttttcaacactctttccaccactcacttatttattggatgaaatcaatatatgtcccaccattttgtgggagttcaattttcaaagtgtaga 32122905  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    |||||||| |||||| ||||||| | ||||| || |||||| ||||||    
T  32122906 cccacaatgatttaagccaataaaaaagtgaataatagagatagtgtt 32122953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 12753929 - 12753766
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| |||||||| | ||||| ||||| ||||||||||| ||||  | | |||||||||||||||||||  |||| ||||| |  ||||| |    
T  12753929 acactcacttttgaacactctttatagcaatcactctttcattggataaaatacatgcatgtcccaccactttgtgtgggttctattttcagggtgtaca 12753830  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    | |||||| |||||||| ||||| |||| ||||||||||||||||||| |||||| ||||||||    
T  12753829 ctcacaatgatttaaactaataaaagagcgagtattagagagagtgttgaaaagagagtgttgc 12753766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 94 - 213
Target Start/End: Complemental strand, 16852098 - 16851979
Alignment:
Q  94 gatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagag 193  Q
    |||||||| || |||||||||||||||||||    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||| |||      
T  16852098 gatgaaataaatgtatgtcccaccactttgtaggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgggtattagggagga 16851999  T
Q  194 tgttcaaaagaaagtgttgc 213  Q
    ||||||||||| ||||||||    
T  16851998 tgttcaaaagagagtgttgc 16851979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 213
Target Start/End: Complemental strand, 16187558 - 16187440
Alignment:
Q  91 ttggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagaga 190  Q
    |||||| ||||||| ||||  ||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||||||||||| |||||||||||||  |    
T  16187558 ttggattaaatcaatgtat--cccaccattttgtgtaagttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagtattag--a 16187463  T
Q  191 gagtgttcaaaagaaagtgttgc 213  Q
    ||||||| |||||| ||||||||    
T  16187462 gagtgttgaaaagagagtgttgc 16187440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 213
Target Start/End: Complemental strand, 16187776 - 16187658
Alignment:
Q  91 ttggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagaga 190  Q
    |||||| ||||||| ||||  ||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||||||||||| |||||||||||||  |    
T  16187776 ttggattaaatcaatgtat--cccaccattttgtgtaagttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagtattag--a 16187681  T
Q  191 gagtgttcaaaagaaagtgttgc 213  Q
    ||||||| |||||| ||||||||    
T  16187680 gagtgttgaaaagagagtgttgc 16187658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 2675906 - 2676053
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| ||||||||| | | | || || ||||| ||| |||| ||||| |||| ||||||||||||||||||| || ||| |||||| ||| ||||||    
T  2675906 acactcatttttcaacattttttttaacattcactcttttattgaatgaattcaatgtatgtcccaccactttgtttaggtttaattttcaaaatgtaga 2676005  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    ||||||||  ||||||||||||| | ||||||||||||||||||||||    
T  2676006 cccacaatggtttaaaccaataaaaaagtgagtattagagagagtgtt 2676053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 32112852 - 32112725
Alignment:
Q  84 tttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagta 183  Q
    ||||| ||||||||||||||| | ||||| ||||| |||||||  |||  ||||| |||||||||| ||||||| ||||||| |||||||||||||| ||    
T  32112852 ttttttattggatgaaatcaatgcatgtcacaccattttgtgtgggttttattttcaaagtgtagatccacaatgatttaaaacaataagagagtgaata 32112753  T
Q  184 ttagagagagtgttcaaaagaaagtgtt 211  Q
    ||||||||| ||||||||||| ||||||    
T  32112752 ttagagagaatgttcaaaagagagtgtt 32112725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 82 - 204
Target Start/End: Complemental strand, 12780896 - 12780774
Alignment:
Q  82 actttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgag 181  Q
    ||||||| ||| | || |||||| ||||||| ||| |||||||||  |||||||||| |||||||||| ||||||| ||||||||||||||| || |||     
T  12780896 acttttttattaggtggaatcaatgtatgtctcactactttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataagggaatgaa 12780797  T
Q  182 tattagagagagtgttcaaaaga 204  Q
    |||||||||| ||||||||||||    
T  12780796 tattagagagggtgttcaaaaga 12780774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 8441949 - 8441857
Alignment:
Q  119 ctttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgtt 211  Q
    |||||||  ||||||||||| ||||||||||||  ||||||| ||||||||||| ||||||||||||||||||||||||||||| | ||||||    
T  8441949 ctttgtgggagttcaattttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgttcaaaaaatagtgtt 8441857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 8450753 - 8450661
Alignment:
Q  119 ctttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgtt 211  Q
    |||||||  ||||||||||| ||||||||||||  ||||||| ||||||||||| ||||||||||||||||||||||||||||| | ||||||    
T  8450753 ctttgtgggagttcaattttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgttcaaaaaatagtgtt 8450661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 204
Target Start/End: Complemental strand, 17144822 - 17144686
Alignment:
Q  68 tctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaacc 167  Q
    ||||||||||||| ||| ||| |||| ||||||||||  ||||| |||||  |||||||| ||| |||||| |||||||||||||||||| ||||||||     
T  17144822 tctctctagcacttactattttattgaatgaaatcaatatatgttccaccgttttgtgtaggttaaattttcaaagtgtagacccacaatgatttaaact 17144723  T
Q  168 aataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |||||  |||| ||||||| |||||||| | ||||||    
T  17144722 aataaaggagtaagtattaaagagagtggttaaaaga 17144686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 19090384 - 19090220
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||| ||||| | ||||||||||||||| |||| ||| ||||| ||||||||| ||||||||||||||||| |||  |||| ||||  |||||||||     
T  19090384 acactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtagg 19090285  T
Q  150 ccc-acaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     || ||| | | || ||||||||| |||||||||  ||||||||||| |||||||| ||||||||    
T  19090284 tcctacattgaattcaaccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgc 19090220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 204
Target Start/End: Complemental strand, 12785077 - 12784954
Alignment:
Q  81 cactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtga 180  Q
    |||||||| ||||| || |||||| |||||||  || ||||| ||| ||||||||||| |||||||||| ||| ||| |||||||||||||||||| ||     
T  12785077 cacttttttattgggtggaatcaatgtatgtcttactactttatgttagttcaattttcaaagtgtagatccataatgatttaaaccaataagagaatgg 12784978  T
Q  181 gtattagagagagtgttcaaaaga 204  Q
     ||||||| || || |||||||||    
T  12784977 atattagaaagggtattcaaaaga 12784954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 63 - 213
Target Start/End: Original strand, 16436089 - 16436238
Alignment:
Q  63 aacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataattt 162  Q
    |||| |||||||| ||  |||| |||||||  |||||||||| ||||| ||||||| |||||||  |||| |||| ||||||||||||||| ||  ||||    
T  16436089 aacattctctctatcatccactctttcattatatgaaatcaatgtatg-cccaccattttgtgtgggttctatttctaaagtgtagacccaaaaagattt 16436187  T
Q  163 aaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||||||  || ||| ||||| | |||||||| |||||| ||||||||    
T  16436188 aaaccaataatcgactgaatattaaaaagagtgtttaaaagagagtgttgc 16436238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 35128892 - 35128794
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag 148  Q
    |||||| ||||| |||||||||||||||| ||||| ||| ||||| | ||||||| ||||||||||||||||| |||  |||| ||||| |||||||||    
T  35128892 acactctcttttgaacactctctctagcagtcactcttttattgggtaaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtag 35128794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 19737589 - 19737440
Alignment:
Q  65 cactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataattta 163  Q
    |||||||||||||||||||| ||| ||||| ||||||||| |||| ||| | |||||| |||  |||  ||||  |||||||| | || ||| | ||||     
T  19737589 cactctctctagcactcactctttaattgggtgaaatcaatgtatatcctatcactttatgtgggtttcatttccaaagtgtaggtcctacattgatttg 19737490  T
Q  164 aaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    | ||||||| |||||||||  |||||||| ||||||||||| ||||||||    
T  19737489 agccaataaaagagtgagtgatagagagaatgttcaaaagagagtgttgc 19737440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 210
Target Start/End: Original strand, 13001703 - 13001863
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||| ||||||||||| || ||| ||||||||||||| |||| || ||||||| || || ||| |||   ||||||||  ||| |||| |    
T  13001703 acactcacttttcagcactctctctaacattcattttttcattggataaaataaatgtatgtcacatcattttatgtggattcaatttgcaaaatgtaaa 13001802  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    || | ||  |||||||||||||| ||||||| ||||  ||||||  || |||||| |||||    
T  13001803 cctataaagatttaaaccaataaaagagtgaatattgaagagagaatttaaaagagagtgt 13001863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 32599086 - 32598954
Alignment:
Q  81 cactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtga 180  Q
    |||| ||| |||||||| |||  | ||||||||| |||||||||||  || | ||||  ||||||||||  |||||| ||||||| |||||| |||||||    
T  32599086 cactcttttattggatggaatacatgtatgtcccgccactttgtgtgggtgctatttccaaagtgtagattcacaatgatttaaatcaataaaagagtga 32598987  T
Q  181 gtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||| ||||| |||| |||||| | ||||||    
T  32598986 gtattaaagagaatgtttaaaagagaatgttgc 32598954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 212
Target Start/End: Original strand, 31443978 - 31444132
Alignment:
Q  58 ttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaat 157  Q
    ||||||||||||| | || |||||| | ||| |||||||||||| ||  ||||| |||||| |||||||  |||||||||| ||||||| ||| |||||     
T  31443978 ttttcaacactctttttaacactcattcttttattggatgaaattaatttatgttccaccattttgtgtcggttcaattttcaaagtgttgactcacaag 31444077  T
Q  158 aatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
     |||||||  ||| |    |||| ||||||||||| ||||||| ||| |||||||    
T  31444078 gatttaaattaatgaacacgtgaatattagagagaatgttcaagagagagtgttg 31444132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 138
Target Start/End: Original strand, 2931576 - 2931660
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttt 138  Q
    |||||||||||||||||||||| || || ||| || ||| ||||||||||| |||||||| |||| ||||||   ||||||||||    
T  2931576 tcacttttcaacactctctctatcattcgcttatttatttgatgaaatcaatgtatgtcctaccattttgtggtggttcaatttt 2931660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 4595766 - 4595850
Alignment:
Q  63 aacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta 147  Q
    |||||||||||||||||||||| ||| ||||  ||||||||| ||||||| ||||||||| | |  |||| ||||| ||||||||    
T  4595766 aacactctctctagcactcactcttttattgagtgaaatcaatgtatgtctcaccactttttatgggttccattttcaaagtgta 4595850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 6531451 - 6531380
Alignment:
Q  66 actctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaattt 137  Q
    |||||||| |||||||||| ||| ||||| ||||||||| ||||||||||| ||||| ||| ||||| ||||    
T  6531451 actctctccagcactcactcttttattgggtgaaatcaatgtatgtcccactactttatgtgagttccattt 6531380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 373425 - 373482
Alignment:
Q  65 cactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    ||||||||||||||| |||||||| ||||| | ||||||| |||||||||| ||||||    
T  373425 cactctctctagcacccacttttttattgggtaaaatcaatgtatgtcccagcacttt 373482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 25326841 - 25326914
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    ||||||| ||||||||||||||||  | |||||| ||| | ||||||| ||||||| ||||| |||||||||||    
T  25326841 gacactctcttttcaacactctcttcaacactcattttcttattggataaaatcaatgtatgacccaccacttt 25326914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 26159376 - 26159449
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    ||||||| ||||||||||||||||  | |||||| ||| | ||||||| ||||||| ||||| |||||||||||    
T  26159376 gacactctcttttcaacactctcttcaacactcattttcttattggataaaatcaatgtatgacccaccacttt 26159449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 8442005 - 8441953
Alignment:
Q  51 cactcacttttcaacactctctctagcactcactttttcattggatgaaatca 103  Q
    |||||| |||||||||||||||||| ||||||||  || ||||||||||||||    
T  8442005 cactcatttttcaacactctctctaacactcactcatttattggatgaaatca 8441953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 8450809 - 8450757
Alignment:
Q  51 cactcacttttcaacactctctctagcactcactttttcattggatgaaatca 103  Q
    |||||| |||||||||||||||||| ||||||||  || ||||||||||||||    
T  8450809 cactcatttttcaacactctctctaacactcactcatttattggatgaaatca 8450757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 12327362 - 12327298
Alignment:
Q  62 caacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgt 126  Q
    ||||||||||||||||| ||||| ||| |||||||  |||||| |||||||| |||| |||||||    
T  12327362 caacactctctctagcagtcactcttttattggatagaatcaatgtatgtcctaccattttgtgt 12327298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 203
Target Start/End: Complemental strand, 29610408 - 29610252
Alignment:
Q  48 tgacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgt- 146  Q
    |||||||| ||||||||||||||||| | |||||||||  | ||| | | |||| || |||||||||||||||||  ||     |||||| ||| ||||     
T  29610408 tgacactctcttttcaacactctctcaaacactcacttgcttattagtttaaatgaatgtatgtcccaccactttaagtggaaccaatttctaatgtgtg 29610309  T
Q  147 agacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaag 203  Q
    ||||||||| | ||||||||||| ||   ||||||| || ||||||||||| |||||    
T  29610308 agacccacattcatttaaaccaacaatcaagtgagtgtttgagagagtgttgaaaag 29610252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 14211722 - 14211777
Alignment:
Q  119 ctttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataaga 174  Q
    ||||||||| |||||||||||||| ||||  | |||||| ||||||||||||||||    
T  14211722 ctttgtgtatgttcaatttttaaaatgtaatctcacaatgatttaaaccaataaga 14211777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 32439548 - 32439486
Alignment:
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgtt 211  Q
    |||||||  ||||| | ||||||||||||||||| ||||||||||||||  ||||| ||||||    
T  32439548 acccacatgaatttcacccaataagagagtgagtgttagagagagtgtttgaaagagagtgtt 32439486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 20128839 - 20128798
Alignment:
Q  154 caataatttaaaccaataagagagtgagtattagagagagtg 195  Q
    |||||||||||||||||||| ||||||||| || ||||||||    
T  20128839 caataatttaaaccaataagggagtgagtactaaagagagtg 20128798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 22204031 - 22204072
Alignment:
Q  154 caataatttaaaccaataagagagtgagtattagagagagtg 195  Q
    |||||||||||||||||||| ||||||||| || ||||||||    
T  22204031 caataatttaaaccaataagggagtgagtactaaagagagtg 22204072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 34231918 - 34231873
Alignment:
Q  168 aataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||| | |||| |||||||||||||||||||||| ||||||||    
T  34231918 aataagaaaatgagcattagagagagtgttcaaaagatagtgttgc 34231873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 3062002 - 3061942
Alignment:
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    |||||| |||| ||||||||||  ||||||||||| | |||||||| |||||||| |||||    
T  3062002 cccacattaatataaaccaatataagagtgagtatcatagagagtgctcaaaagagagtgt 3061942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 29610244 - 29610280
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactt 85  Q
    ||||||||||||||||||||||||| | |||||||||    
T  29610244 gacactcacttttcaacactctctcaaacactcactt 29610280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 3e-54; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 27888293 - 27888456
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| | ||||||||||| |||||||  | ||||||||| ||||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  27888293 acactcacttttgagcactctctctaacactcaccctctcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgtaga 27888392  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| |||||||||||||||||||||||| |||||||||||| |||||||| ||||||||    
T  27888393 cccacaatgatttaaaccaataagagagtgagtgttagagagagtgctcaaaagagagtgttgc 27888456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 50 - 212
Target Start/End: Original strand, 22189950 - 22190112
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||| ||||| |||||||||||||||  |||||||||| ||||||||||    
T  22189950 acactcatttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatggcccaccactttgtgtgggttcaattttcaaagtgtaga 22190049  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    ||| |||| ||||||||||||||  ||||||||||||||||| |||||||||||| |||||||    
T  22190050 cccgcaatgatttaaaccaataaacgagtgagtattagagagggtgttcaaaagagagtgttg 22190112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 27949284 - 27949447
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| ||||||||||||| |||||||| ||  |||||||||||||||  ||||||| |||| ||||||| ||||||| ||| ||||||||||    
T  27949284 acactcactttttaacactctctctaacactcactcttgtattggatgaaatcaagttatgtcctaccattttgtgtgagttcaaatttcaaagtgtaga 27949383  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  27949384 cccacaatgatttaaactaataagagagtgagtattagagagagtgttcaaaagagagtgttgc 27949447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 50 - 204
Target Start/End: Original strand, 14795142 - 14795296
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||||||||||||| || ||||||||| ||||||||||||||| ||||||||||||| ||| |||  ||||||||||||||||||| |    
T  14795142 acactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttttaaagtgtata 14795241  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
     ||| ||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  14795242 tccataatgatttaaactaataagagagtgagtataagagagagtgttcaaaaga 14795296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 50 - 204
Target Start/End: Original strand, 15242134 - 15242288
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||||||||||||| || ||||||||| ||||||||||||||| ||||||||||||| ||| |||  ||||||||||||||||||| |    
T  15242134 acactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttttaaagtgtata 15242233  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
     ||| ||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  15242234 tccataatgatttaaactaataagagagtgagtataagagagagtgttcaaaaga 15242288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 50 - 212
Target Start/End: Original strand, 11824082 - 11824242
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| |||||||| |||||||||||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||  ||||||||| |||||||| |    
T  11824082 acactcatttttcaacgctctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccattttgtgtagcttcaattttcaaagtgtaaa 11824181  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    |||||||| ||||||| |||||||| ||||||||||  ||||||||||||||||| |||||||    
T  11824182 cccacaatgatttaaatcaataagaaagtgagtatt--agagagtgttcaaaagagagtgttg 11824242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 7775019 - 7775164
Alignment:
Q  58 ttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaat 157  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||| || ||| |||    
T  7775019 ttttcaacactctctatagcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtgtgga-ccagaat 7775117  T
Q  158 aatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
     |||||||| |||||| |||||| |||||||||||||||||||||||    
T  7775118 gatttaaacaaataagtgagtgaatattagagagagtgttcaaaaga 7775164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 6442176 - 6442339
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| |||||||||||||||||| |||||| |  || |||| |||||||||| |||||| |||||| ||||||    ||||||||| ||||||||||    
T  6442176 acactcatttttcaacactctctctatcactcagtcatttattgtatgaaatcaatgtatgttccaccattttgtggggattcaattttcaaagtgtaga 6442275  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| |||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||    
T  6442276 cccacaatgatttaaaccaataaaagagtgagtattaaagatagtgttcaaaagaaagtgttgc 6442339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 12263605 - 12263458
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||| |||||||||||||||||||| ||  |||| ||| || ||||| |||||| |||||||||| ||||||||||| | |||||||| ||||||||||    
T  12263605 acacttacttttcaacactctctctatcatccactcttttatcggatggaatcaatgtatgtcccatcactttgtgtaggatcaattttcaaagtgtaga 12263506  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||    
T  12263505 cccacaatgatttaaaccaataagatagtgagtattagagagagtgtt 12263458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 32213038 - 32212876
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| |||||||||||||||||||  | ||| ||||||||||||||| ||||||| ||| ||||||| |  |||||||||||||| |||||     
T  32213038 acactcactttttaacactctctctagcactctatcttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag- 32212940  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| |||||||||||||||||||||||||||| | || |||||||||||| ||||||||    
T  32212939 cccacaatgatttaaaccaataagagagtgagtattatatagggtgttcaaaagagagtgttgc 32212876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 39254098 - 39254248
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||||||| ||||| ||||||||||| ||| |||| || |||| || ||||||  |||||||||||||  |||||||||||||| ||||||||||    
T  39254098 tcacttttcaacattctctatagcactcactcttttattgaataaaattaatgtatgtttcaccactttgtgttggttcaatttttaaaatgtagaccca 39254197  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |||||||||||| |||||||||||||||| ||| |||||||||||||||||    
T  39254198 caataatttaaatcaataagagagtgagtgttaaagagagtgttcaaaaga 39254248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 50 - 179
Target Start/End: Complemental strand, 31502633 - 31502504
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||| ||||||||||||| |||||||  |||||||||| ||||||||||    
T  31502633 acactcacttttcaacagtctctctaacactcactcttttattggatgaaatcaaggtatgtcccaccattttgtgtgcgttcaattttcaaagtgtaga 31502534  T
Q  150 cccacaataatttaaaccaataagagagtg 179  Q
    | |||||| |||||||||||||||||||||    
T  31502533 ctcacaatgatttaaaccaataagagagtg 31502504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 32205090 - 32205250
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| |||||||||||||   |||||| ||| ||||||||||||||| |||||||| |||| |||||||  |||||||||||||||| |||     
T  32205090 acactcacttttgaacactctctcta---ctcactcttttattggatgaaatcaatgtatgtcctaccattttgtgtgggttcaatttttaaagtatagg 32205186  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     | ||||| |||||||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  32205187 tctacaatgatttaaactaataagagagtgagtattagagaggatgttcaaaagaaagtgttgc 32205250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 33008115 - 33008275
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||  |||| ||||  || |||||||    
T  33008115 acactcacttttgaacactatctctagcactcactcttttattggatgaaatcattgtatgtcccaccactttgtgtgggttctatttccaatgtgtaga 33008214  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| |||||||||||||| |||| ||||||||   ||||||||||||||| ||||||||    
T  33008215 cccacaatgatttaaaccaataaaagagagagtatta---agagtgttcaaaagagagtgttgc 33008275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 212
Target Start/End: Complemental strand, 6580174 - 6580009
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattg---gatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgt 146  Q
    ||||||||||||||||||||| ||| |||||||||||||  ||    | || | |||| ||||||| ||| |||||||||| |||||||||| ||| | |    
T  6580174 acactcacttttcaacactctttcttgcactcactttttttttttttggtggattcaatgtatgtctcactactttgtgtaggttcaattttcaaaatat 6580075  T
Q  147 agacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6580074 ggacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttg 6580009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 213
Target Start/End: Original strand, 11692220 - 11692353
Alignment:
Q  80 tcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtg 179  Q
    ||||| ||| ||||||||||||||| |||||||| ||||||||||||| |||||||||| |||||||| || |||| | |||||||| |||| |||||||    
T  11692220 tcactcttttattggatgaaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgtaaactcacagtgatttaaactaatatgagagtg 11692319  T
Q  180 agtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||||||| |||||||||||| ||||||||    
T  11692320 agtattagagagtgtgttcaaaagagagtgttgc 11692353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 50 - 203
Target Start/End: Complemental strand, 19423003 - 19422850
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| | |||| |     | |||||  |||||||||    
T  19423003 acactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatgtatgtcccaccccattgtattgtcactattttcgaagtgtaga 19422904  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaag 203  Q
     ||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||    
T  19422903 tccacaatgatttaaaccaataaaagagtgagtatcagagatagtgttcaaaag 19422850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 56 - 212
Target Start/End: Complemental strand, 44350965 - 44350809
Alignment:
Q  56 acttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccaca 155  Q
    ||||||||||||| |||||| ||  |||||||| ||||||| ||||||| ||||||| |  |||||||| || |||||||||| ||||||||||| ||||    
T  44350965 acttttcaacactttctctaacatccacttttttattggatcaaatcaatgtatgtctcgtcactttgtttaggttcaattttcaaagtgtagactcaca 44350866  T
Q  156 ataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    || ||||||||||| || |||||||||||||||||  |||||||||||| |||||||    
T  44350865 atgatttaaaccaacaaaagagtgagtattagagatggtgttcaaaagagagtgttg 44350809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 46517304 - 46517465
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| ||||||||  ||||||||||||  || ||||||| ||||||| |||| |||||||| | ||||   |||||||||| ||||||||||    
T  46517304 acactcactttttaacactct--ctagcactcactcatttattggataaaatcaatgtatatcccaccattctgtgggggttcaattttcaaagtgtaga 46517401  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    | |||||| |||||||||||||||||| ||||||||||||||  ||||||||||| ||||||||    
T  46517402 ctcacaatgatttaaaccaataagagaatgagtattagagaggctgttcaaaagagagtgttgc 46517465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 48374606 - 48374445
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| ||||||||||  || ||||||| ||| |||| ||| |||  | | ||||||||||||||| | |  |||| ||||  |||||||| |    
T  48374606 acactcacttttgaacactctct--agtactcactcttttattgaatggaattcatgcatgtcccaccactttctatgggttctatttccaaagtgtata 48374509  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  48374508 ctcacaataatttaaaccaacaagagagtgagtattagagagagtgttcaaaagagagtgttgc 48374445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 7459354 - 7459517
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| |||| ||||| ||  ||||| | ||| ||| ||| ||||||| |||| | |||||||||| ||| || |||||||| ||| | ||||    
T  7459354 acactcactttttaacattctctataatactcattcttttattcgataaaatcaatgtatattccaccactttatgtgagctcaattttcaaaatataga 7459453  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     |||||||||||||||||||||| ||||||||||||| ||||||| ||||||  ||||||||||    
T  7459454 tccacaataatttaaaccaataaaagagtgagtattaaagagagtattcaaataaaagtgttgc 7459517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 94 - 213
Target Start/End: Complemental strand, 25686960 - 25686841
Alignment:
Q  94 gatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagag 193  Q
    ||||||||||| |||||||  |||||||| | |  |||||||||| |||||||||||||||||| |||||||||||||||| | ||||||||||| |||     
T  25686960 gatgaaatcaatgtatgtcataccactttttatgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagataatgagtattagaaagaa 25686861  T
Q  194 tgttcaaaagaaagtgttgc 213  Q
    ||||||||||| ||||||||    
T  25686860 tgttcaaaagagagtgttgc 25686841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 105 - 204
Target Start/End: Original strand, 27320440 - 27320539
Alignment:
Q  105 agtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||||  ||||||| |||||||| |||||||||| |||||||||    
T  27320440 agtatatcccaccattttgtgtaggttcaatttttaaagtgtagacccacaattatttaaatgaataagaaagtgagtagtagagagagtattcaaaaga 27320539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 172
Target Start/End: Complemental strand, 25092830 - 25092708
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||||||||||   |||| |||| ||||||| |||| |||||| |||||||| || ||||||||| |||||||||||  |||| ||||    
T  25092830 acactcacttttcaacactctcttccgcacccactctttcatttgatgcaatcaatgtatgtcctactactttgtgtgagttcaattttctaagtataga 25092731  T
Q  150 cccacaataatttaaaccaataa 172  Q
    | |||||||||||||||||||||    
T  25092730 cacacaataatttaaaccaataa 25092708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 44511105 - 44510999
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| || |||||||| |  |||||||||| || |||||||    
T  44511105 acacttacttttcaacactctctctagcactcacttttttattggatgaaatcaatgtatgtctcatcactttgtctgtgttcaattttcaatgtgtaga 44511006  T
Q  150 cccacaa 156  Q
     ||||||    
T  44511005 tccacaa 44510999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 200
Target Start/End: Complemental strand, 32178966 - 32178823
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    |||||||||||||||||||  |||||| ||| ||| |||||||||||| || |||||| |||||||| ||| | | ||||||||| |||||||| || ||    
T  32178966 tcacttttcaacactctct--agcacttactattttattggatgaaattaatgtatgttccaccactctgtttta-ttcaattttcaaagtgtatacaca 32178870  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaa 200  Q
    |||| ||||||| |||||||||||||| ||| ||||||| |||||||    
T  32178869 caatgatttaaatcaataagagagtgattatcagagagattgttcaa 32178823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 213
Target Start/End: Complemental strand, 24539293 - 24539128
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta- 147  Q
    ||||||| |||||  |||||||||||| |||||||| ||| ||||||| |||||||  |||||||||||||||| | |   ||| ||||  ||| ||||     
T  24539293 gacactctcttttggacactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtat 24539194  T
Q  148 gacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| | |||||| ||||| ||||||||||| ||||||||||||| ||||||| ||||||||    
T  24539193 gacccacattgatttaacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttgc 24539128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 8073457 - 8073369
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttt 138  Q
    ||||||| ||||||||| |||  |||||||||||| ||| || |||||||||||| |||||||||||||||||||||||||||||||||    
T  8073457 acactcatttttcaacattcttcctagcactcactcttttatcggatgaaatcaatgtatgtcccaccactttgtgtaagttcaatttt 8073369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 13919791 - 13919955
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-g 148  Q
    |||||| ||||| | ||||||||||||||||| ||  || ||||| ||||||||| ||||||||||||||||| |||  |||| ||||| |||||||| |    
T  13919791 acactctcttttgagcactctctctagcactcgctcatttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagg 13919890  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     || ||| | |||| | |||||||  ||||||||  ||||||||||| |||||||| ||||||||    
T  13919891 tcctacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgttgc 13919955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 213
Target Start/End: Original strand, 17749719 - 17749869
Alignment:
Q  64 acactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataattt 162  Q
    |||||||||||| |||||||| ||| ||||||| |||||||  |||||||||||||||| | |   ||  ||||  ||| |||| |||||||| | ||||    
T  17749719 acactctctctaacactcactcttttattggataaaatcaatatatgtcccaccactttatatggatttcatttccaaaatgtatgacccacattgattt 17749818  T
Q  163 aaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    || ||||| ||||||||||| ||||||||||||| ||||||| ||||||||    
T  17749819 aacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttgc 17749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 213
Target Start/End: Complemental strand, 26703591 - 26703445
Alignment:
Q  68 tctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataatttaaac 166  Q
    ||||||||||||||||| ||| ||||| ||||||||| ||||||| ||||||||| |||  |||| |||| ||||||||| | || ||| | |||| | |    
T  26703591 tctctctagcactcactcttttattgggtgaaatcaatgtatgtctcaccactttatgtgggttccatttctaaagtgtaggtcctacatttatttcacc 26703492  T
Q  167 caataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||| |||||||||  ||||||||||| ||| |||| ||||||||    
T  26703491 caataaaagagtgagtgctagagagagtgctcagaagagagtgttgc 26703445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 45909481 - 45909631
Alignment:
Q  65 cactctctctagcactcact-ttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccc-acaataattt 162  Q
    ||||||| |||||| ||||| |||| ||||| ||||||||| ||||||||||||||||| |||  |||| ||||  ||| |||||  || ||| | ||||    
T  45909481 cactctccctagcattcactctttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaattgtaggtcctacattgattt 45909580  T
Q  163 aaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     | ||||||| ||||||||| ||||||||||| ||||||||| ||||||||    
T  45909581 tacccaataaaagagtgagtgttagagagagtattcaaaagagagtgttgc 45909631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 31874114 - 31874174
Alignment:
Q  137 tttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    |||||||||||||| |||||| ||||||||| ||||||||||||||||| |||||||||||    
T  31874114 tttaaagtgtagactcacaatgatttaaacctataagagagtgagtattcgagagagtgtt 31874174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 36845682 - 36845567
Alignment:
Q  58 ttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaat 157  Q
    ||||||||||| ||| || | |||||| ||| |||| ||||||||||  ||| || ||||| |||||||  |||||||||| ||||| ||||||||||||    
T  36845682 ttttcaacactttctttatcgctcactcttttattgaatgaaatcaatatat-tctcaccaatttgtgtgggttcaattttcaaagtatagacccacaat 36845584  T
Q  158 aatttaaaccaataaga 174  Q
     ||||||||||||||||    
T  36845583 gatttaaaccaataaga 36845567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 7774956 - 7775011
Alignment:
Q  151 ccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaa 206  Q
    ||||||| |||||||||||||||||||| | |||||||||||||||||||||||||    
T  7774956 ccacaatgatttaaaccaataagagagtaaatattagagagagtgttcaaaagaaa 7775011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 204
Target Start/End: Original strand, 32605350 - 32605496
Alignment:
Q  57 cttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaa 156  Q
    |||||||||||||| | ||||||||| | ||| || |||||||||||| ||||||| ||  |||||||||   ||||||||||||||||||| | |||||    
T  32605350 cttttcaacactctttttagcactcattcttttat-ggatgaaatcaatgtatgtctcattactttgtgtggattcaatttttaaagtgtaggctcacaa 32605448  T
Q  157 taatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    | |||||||  |||||||| || | ||||| |||   |||||||||||    
T  32605449 tgatttaaattaataagagggtaaatattaaagaagttgttcaaaaga 32605496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 12271002 - 12271095
Alignment:
Q  55 cacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||||| |||||  |||| ||| ||  ||||||||||| |||||||||||||||||||||  |||| ||||| ||||||||||    
T  12271002 cacttttcaacactctctatagcatccactcttttatcagatgaaatcaatgtatgtcccaccactttgtgt-ggttctattttcaaagtgtaga 12271095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 22786162 - 22786260
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag 148  Q
    |||||| ||||| | |||||||||||||||||||||||| ||| | ||||||||| ||||||| ||||||||| |||  |||| ||||  |||||||||    
T  22786162 acactctcttttgagcactctctctagcactcacttttttattaggtgaaatcaatgtatgtctcaccactttatgtgggttccatttccaaagtgtag 22786260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 183
Target Start/End: Original strand, 1688002 - 1688127
Alignment:
Q  58 ttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaat 157  Q
    |||| ||||||||||||  || |||||||||| |||||||||||  | ||||||| ||||||||||  | ||||  ||||  |||||||||||| ||||     
T  1688002 tttttaacactctctctgtcattcactttttctttggatgaaattgatgtatgtctcaccactttgcatgagttttatttccaaagtgtagacctacaac 1688101  T
Q  158 aatttaaaccaataagagagtgagta 183  Q
     |||||| ||||||| ||||||||||    
T  1688102 gatttaacccaataaaagagtgagta 1688127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 31628089 - 31628170
Alignment:
Q  129 gttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    |||| |||| |||||||| |||| || || |||||||||||||||||||| ||||||| ||| |||||||||||| ||||||    
T  31628089 gttctatttataaagtgttgacctacgatgatttaaaccaataagagagtaagtattaaagatagtgttcaaaagcaagtgt 31628170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 31731367 - 31731282
Alignment:
Q  107 tatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagaga 192  Q
    ||||| ||||||||||||||| |||| ||||  ||| | ||||||| | ||||||||||||||||||| | |||||||||||||||    
T  31731367 tatgttccaccactttgtgtatgttctatttccaaaatatagacccgcgataatttaaaccaataagaaaatgagtattagagaga 31731282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 36845566 - 36845497
Alignment:
Q  144 tgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||||||||| |||||||||||||||||||||| ||||  ||||||| ||||||| | ||||||||    
T  36845566 tgtagacccacaatgatttaaaccaataagagagtgaatattctagagagtattcaaaatagagtgttgc 36845497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 14759670 - 14759818
Alignment:
Q  66 actctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataatttaa 164  Q
    |||||| |||||||||||| ||| ||||  |||||||||  ||||||||||||||||  ||| |||| ||||  |||||||| | || ||| |||||| |    
T  14759670 actctccctagcactcactcttttattgagtgaaatcaatttatgtcccaccactttaggtaggttctatttccaaagtgtaggtcctacattaatttca 14759769  T
Q  165 accaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     ||||||| |||||| ||  ||| ||||||| |||||||| ||||||||    
T  14759770 tccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgc 14759818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 23564166 - 23564053
Alignment:
Q  88 tcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagag----agtgagta 183  Q
    |||||| || |||| || ||||||| ||||||||||| | ||||| ||||| |||||||||| ||||  |||||||||||||||| ||    ||||||||    
T  23564166 tcattgaataaaattaatgtatgtcgcaccactttgtatgagttctattttcaaagtgtagatccactgtaatttaaaccaataaaagagtaagtgagta 23564067  T
Q  184 ttagagagagtgtt 197  Q
    | ||||||||||||    
T  23564066 taagagagagtgtt 23564053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 25428648 - 25428484
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||| ||||| | |||||| | ||| ||||||| ||| ||||  ||||||||| ||||||||||||||||| |||  |||  ||||  ||||||||||    
T  25428648 acactctcttttgagcactctttttagtactcactcttttattgtgtgaaatcaatgtatgtcccaccactttatgtgggttacatttccaaagtgtaga 25428549  T
Q  150 -cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     || ||| | |||| | ||||||| |||||||||  || |||||||| |||||||| ||||||||    
T  25428548 tcctacattgattttatccaataaaagagtgagtgctaaagagagtgctcaaaagagagtgttgc 25428484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 148
Target Start/End: Complemental strand, 17354681 - 17354598
Alignment:
Q  65 cactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag 148  Q
    ||||||||||| |||||| | ||| ||||||||||||||| ||||||||||||||||| |||  |||| ||||  |||||||||    
T  17354681 cactctctctaacactcattcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttctatttccaaagtgtag 17354598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 149
Target Start/End: Complemental strand, 19494488 - 19494409
Alignment:
Q  70 tctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| ||||||| ||| ||||| ||||||||| ||||||||||||||||| |||  |||| ||||| ||||||||||    
T  19494488 tctctagtactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtaga 19494409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 204
Target Start/End: Complemental strand, 10934134 - 10933980
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||  ||| |||||||||||||  | ||| | ||| ||||||| |||| ||  |||||| ||||||||||| |   ||| ||||  ||||| || |    
T  10934134 acactcatgttttaacactctctctattattcattcttttattggataaaattaatatatgtctcaccactttgtatggtttctatttccaaagtataaa 10934035  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |||||||| |||||||| ||||||||| ||||||||| | |||| ||||||||||    
T  10934034 cccacaatgatttaaactaataagagattgagtattaaaaagagcgttcaaaaga 10933980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 12167315 - 12167365
Alignment:
Q  147 agacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  12167315 agacccacaatgatttaaaccaataagaaagtgagtattaaagagagtgtt 12167365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 211
Target Start/End: Complemental strand, 17813923 - 17813789
Alignment:
Q  70 tctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaa 169  Q
    ||||||||||||||| ||| |||  | |||||||| ||||| ||||||||||||||| ||||| |||| |||||| |      ||||| |||||||||||    
T  17813923 tctctagcactcactcttttattaaaagaaatcaatgtatg-cccaccactttgtgtgagttctatttctaaagtat------acaatgatttaaaccaa 17813831  T
Q  170 taagagagtgagtattagagagagtgttcaaaagaaagtgtt 211  Q
    ||| ||| | | | ||| ||||||||||||||||| ||||||    
T  17813830 taaaagaataaatgttaaagagagtgttcaaaagatagtgtt 17813789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 213
Target Start/End: Complemental strand, 46994498 - 46994368
Alignment:
Q  84 tttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgt-agacccacaataatttaaaccaataagagagtgagt 182  Q
    ||||| ||| ||||||||||| ||||| |||||||||||  || |  || ||||  ||||||| |||||||| || |||||| ||||||| | |||||||    
T  46994498 ttttttattagatgaaatcaatgtatgacccaccactttaagtgatatccatttccaaagtgtgagacccaccatgatttaagccaataaaaaagtgagt 46994399  T
Q  183 attagagagagtgttcaaaagaaagtgttgc 213  Q
     |||||||||| ||| |||||| ||||||||    
T  46994398 gttagagagagcgttaaaaagagagtgttgc 46994368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 9648935 - 9649059
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaa--tcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||| |||| || ||||||| ||||||||||| ||| ||||||| |||  |||| |||||| |||||||||||||   ||||  |||  || ||||| |    
T  9648935 actcatttttaaatactctctgtagcactcactatttaattggataaaaaatcaatgtatgttccaccactttgtgcgggttctgtttccaatgtgtata 9649034  T
Q  150 cccacaataatttaaaccaataaga 174  Q
    |||||||| ||||||||||||||||    
T  9649035 cccacaatgatttaaaccaataaga 9649059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 191
Target Start/End: Original strand, 31759838 - 31759915
Alignment:
Q  114 caccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagag 191  Q
    ||||||||||||| | |||||||| |||||| ||||| | |||| |||||| ||||||||| | ||||||||||||||    
T  31759838 caccactttgtgtgacttcaatttataaagtatagactcgcaatgatttaagccaataagaaaatgagtattagagag 31759915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 31874061 - 31874105
Alignment:
Q  69 ctctctagcactcactttttcattggatgaaatcaaagtatgtcc 113  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||    
T  31874061 ctctctagcactcacttttttattggatgaaatcaatgtatgtcc 31874105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 2911856 - 2911934
Alignment:
Q  134 atttttaaagtgt-agacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgtt 211  Q
    |||| |||||||| ||| |||| || |||||| ||||||| | |||||||||| ||||||||||| |||||||||||||    
T  2911856 atttctaaagtgtgagatccaccatgatttaagccaataaaaaagtgagtattggagagagtgttgaaaagaaagtgtt 2911934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 32055594 - 32055708
Alignment:
Q  57 cttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaa 156  Q
    ||||| |||||| |||||| |||| |||  || ||||||||||||||   |||||||||||||||| || |||| | ||| | ||| ||||||| ||||     
T  32055594 cttttgaacactatctctaacactaactcatttattggatgaaatcattttatgtcccaccactttatgcaagtactattgtcaaactgtagactcacat 32055693  T
Q  157 taatttaaaccaata 171  Q
    | |||||||||||||    
T  32055694 tgatttaaaccaata 32055708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 36105584 - 36105522
Alignment:
Q  124 tgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 186  Q
    ||||||||||||||||||| ||||||| |||| |||||||||| ||||| | | |||||||||    
T  36105584 tgtaagttcaatttttaaaatgtagacacacattaatttaaactaataaaataatgagtatta 36105522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 38065386 - 38065332
Alignment:
Q  159 atttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||||||||||| |||||||||| ||||||||||| || ||| ||||||||    
T  38065386 atttaaaccaataagaaagtgagtatttgagagagtgttgaagagagagtgttgc 38065332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 30742615 - 30742546
Alignment:
Q  144 tgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| ||||| ||||||| |||||||| | ||| |||||||| |||||||||||| | ||||||||    
T  30742615 tgtagacctacaatgatttaaatcaataagaaaatgaatattagagtgagtgttcaaaatagagtgttgc 30742546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 42466238 - 42466288
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaatcaa 104  Q
    ||||||||||||||| ||||| |  ||||||||||||||||||||||||||||    
T  42466238 actcacttttcaacattctctat--cactcactttttcattggatgaaatcaa 42466288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 31960026 - 31959975
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaat 101  Q
    |||||| ||||| | ||||||||||||||||||||| || ||||||||||||    
T  31960026 acactctcttttgagcactctctctagcactcacttatttattggatgaaat 31959975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 1316387 - 1316440
Alignment:
Q  153 acaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaag 207  Q
    ||||| |||||||||||||| ||||||||||||||||| | |||| |||||||||    
T  1316387 acaatgatttaaaccaataaaagagtgagtattagagaaaatgtt-aaaagaaag 1316440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 2520644 - 2520698
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaa 104  Q
    |||||| ||||||||||||||||| | |||||||| ||| ||||| |||||||||    
T  2520644 acactctcttttcaacactctctccaacactcactcttttattgggtgaaatcaa 2520698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 26190031 - 26190077
Alignment:
Q  166 ccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    ||||||| ||||||||| ||||||| ||||||||||||| |||||||    
T  26190031 ccaataaaagagtgagtgttagagaaagtgttcaaaagagagtgttg 26190077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 20954851 - 20954798
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatca 103  Q
    |||||| ||||||||||||||||| | |||||||||||| ||||| | ||||||    
T  20954851 acactctcttttcaacactctctcaaacactcacttttttattggcttaaatca 20954798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 37489912 - 37489981
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccacca 118  Q
    ||||||| |||||||||| |||||| | ||||||||| || ||||| | |||| || |||||||||||||    
T  37489912 gacactctcttttcaacattctctcaaacactcacttgtttattggtttaaatgaatgtatgtcccacca 37489981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 87
Target Start/End: Complemental strand, 42863603 - 42863566
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttt 87  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  42863603 acactcacttttaaacactctctctaacactcactttt 42863566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 2291916 - 2291956
Alignment:
Q  164 aaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    ||||||||||||||| |||||  ||||||||||||||||||    
T  2291916 aaccaataagagagtcagtatcggagagagtgttcaaaaga 2291956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 10477272 - 10477336
Alignment:
Q  74 tagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttt 138  Q
    ||||| ||||| ||| ||||||||||||||  ||||||  ||||| |||||||| ||||||||||    
T  10477272 tagcattcactattttattggatgaaatcagtgtatgtttcaccattttgtgtaggttcaatttt 10477336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 20954774 - 20954854
Alignment:
Q  134 atttttaaagtgt-agacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||| |||||||| |||| ||| || |||||| ||||||| | ||||||| || ||||||||||| |||||| ||||||||    
T  20954774 atttctaaagtgtgagactcaccatgatttaagccaataaaaaagtgagtgtttgagagagtgttgaaaagagagtgttgc 20954854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 24539248 - 24539292
Alignment:
Q  166 ccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    ||||||| ||||||||| ||||||||||||| ||||||| |||||    
T  24539248 ccaataaaagagtgagtgttagagagagtgtccaaaagagagtgt 24539292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 3e-54; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 6980285 - 6980126
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||| | |||||||||||| ||||||||||| ||||| ||||||||    
T  6980285 tcacttttcaacactctctctagcactcactcttttattggatgaaatcaaggtatgttctaccactttgtgtgagttcaattttcaaagtatagaccca 6980186  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||| |||| ||| ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  6980185 caatgatttcaactaataagagagtgagtattagagaaagtgttcaaaagagagtgttgc 6980126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 12989202 - 12989365
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||||||||| |  |||||||| ||||||||||||||||||| ||||||||||||||||||| |   ||| ||||   |||||||||    
T  12989202 acactcacttttcaacactctctttctcactcactctttcattggatgaaatcaatgtatgtcccaccactttgtatggattctatttccgaagtgtaga 12989301  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12989302 cccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgc 12989365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 26767930 - 26767767
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||| ||||||||||||| ||| ||| | ||||||||||||| ||||||||||||||||||||   |||||||||| ||| ||||||    
T  26767930 acactcacttttcaacattctctctagcacttactcttttactggatgaaatcaatgtatgtcccaccactttgtgagggttcaattttcaaattgtaga 26767831  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    | |||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  26767830 ctcacaatgatttaaaccaataaaagagtgagtattagatagagtgttcaaaagaaagtgttgc 26767767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 50 - 212
Target Start/End: Original strand, 45554578 - 45554732
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||        |||||||  |||||||||    
T  45554578 acactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactttg--------caattttccaagtgtaga 45554669  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  45554670 cccacaatgatttaaaccaataagaaagtgagtattagagagaatgttcaaaagagagtgttg 45554732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 9470094 - 9470254
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacc 151  Q
    ||||| |||||||| ||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||| |  |||||||||| ||||||||||||    
T  9470094 actcatttttcaacgctctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtagacc 9470193  T
Q  152 cacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||| |||||||||||||||||||||| |||||||||| || |||| |||| ||||||||    
T  9470194 cacaatgatttaaaccaataagagagtgaatattagagagggt-ttcagaagagagtgttgc 9470254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 38464178 - 38464337
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    |||||||||||||||||||||  || | ||||||| |||| |||||||||| ||||||| || ||||||| ||  |||||||||| ||||||||||||||    
T  38464178 tcacttttcaacactctctctgacaattacttttttattgtatgaaatcaatgtatgtctcatcactttgcgtgggttcaattttcaaagtgtagaccca 38464277  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  38464278 caatgatttaaaccaataagagagtaagtattagagagagtgttcaaaagagagtattgc 38464337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 198
Target Start/End: Original strand, 10981531 - 10981677
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacc 151  Q
    |||||||||| ||||||||||||| |||||||||||  |||| ||||||  || |||||||||||||||||||||  |||| ||||  || |||||||||    
T  10981531 actcacttttgaacactctctctaacactcacttttctattgaatgaaaaaaatgtatgtcccaccactttgtgtgggttctatttccaatgtgtagacc 10981630  T
Q  152 cacaataatttaaaccaataagagagtgagtattagagagagtgttc 198  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  10981631 cacaatgatttaaaccaataagagagtgagtattagagggagtgttc 10981677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 65 - 212
Target Start/End: Original strand, 44274260 - 44274407
Alignment:
Q  65 cactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaa 164  Q
    ||||||||||| || ||||| ||||||||||| ||||||| |||||||||||||||||||||  |||||| ||| |||||||||| ||||||| ||||||    
T  44274260 cactctctctaacattcactctttcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaactttcaaagtgtagatccacaatgatttaa 44274359  T
Q  165 accaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    |||||||| ||||||||| ||||||||| | || |||||| |||||||    
T  44274360 accaataacagagtgagtgttagagagaatatttaaaagagagtgttg 44274407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 196
Target Start/End: Original strand, 11539434 - 11539583
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaa--gtatgtcccaccactttgtgtaagttcaatttttaaagtgta 147  Q
    ||||||| |||| |||||||| ||||||||||||| ||| |||||||||||||||   |||||| ||| |||||||||| ||||| ||||| ||||||||    
T  11539434 acactcatttttgaacactctttctagcactcactcttttattggatgaaatcaatatgtatgttccatcactttgtgtgagttctattttcaaagtgta 11539533  T
Q  148 gacccacaata-atttaaaccaataagagagtgagtattagagagagtgt 196  Q
    || ||| |||  ||||||||||||||||||||||||||||||||||||||    
T  11539534 gatccagaattgatttaaaccaataagagagtgagtattagagagagtgt 11539583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 36472007 - 36471863
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||||||||||||  |||||| | | | ||||||||||||||||||||||| ||||||||| | |   ||||||||| ||| |||| |    
T  36472007 acactcacttttcaacactctctctgacactcaatctcttattggatgaaatcaaagtatgtctcaccactttttatggattcaattttcaaaatgtaaa 36471908  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagt 194  Q
    | |||||| |||||||||||||| |||||||||||||||||||||    
T  36471907 ctcacaatgatttaaaccaataaaagagtgagtattagagagagt 36471863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 53 - 212
Target Start/End: Original strand, 19639107 - 19639266
Alignment:
Q  53 ctcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccc 152  Q
    ||||||||| ||||||||||| |||| ||||| ||| ||| ||||||||||| ||||||| || ||| | |||| ||||||||||| |||||| |||||     
T  19639107 ctcactttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaattttcaaagtgcagacct 19639206  T
Q  153 acaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    ||||| |||||||||||||||||||||| ||||| ||||  | ||||||||||| |||||    
T  19639207 acaatgatttaaaccaataagagagtgaatattatagaggctattcaaaagaaaatgttg 19639266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 53 - 212
Target Start/End: Original strand, 19837700 - 19837859
Alignment:
Q  53 ctcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccc 152  Q
    ||||||||| ||||||||||| |||| ||||| ||| ||| ||||||||||| ||||||| || ||| | |||| ||||||||||| |||||| |||||     
T  19837700 ctcactttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaattttcaaagtgcagacct 19837799  T
Q  153 acaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    ||||| |||||||||||||||||||||| ||||| ||||  | ||||||||||| |||||    
T  19837800 acaatgatttaaaccaataagagagtgaatattatagaggctattcaaaagaaaatgttg 19837859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 3804595 - 3804743
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgt-cccaccactttgtgtaagttcaatttttaaagtgtag 148  Q
    ||||||||||||||||||||||| || || ||||| ||| ||||||||||||||| |||||| |||| |||||| |||| ||| |||||| ||||||||     
T  3804595 acactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatgtccccatcactttatgtaggtttaattttcaaagtgtac 3804694  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    |||||||||||||||||  ||||| | ||| ||||||| | ||||||||    
T  3804695 acccacaataatttaaattaataaaatagtaagtattataaagagtgtt 3804743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 34142308 - 34142145
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||| ||||||||||| |||||| | || ||||||||| ||||||||||||  | ||||||| ||| |||||||||  |||||||||| ||||||||||    
T  34142308 acacttacttttcaacaatctctcaaacattcacttttttattggatgaaattcatgtatgtctcactactttgtgtgggttcaattttcaaagtgtaga 34142209  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
      ||||||  ||||||||||||||||||||| ||||| ||| | | ||| ||||| ||||||||    
T  34142208 gtcacaatggtttaaaccaataagagagtgaatattaaagaaaatattctaaagagagtgttgc 34142145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 50 - 201
Target Start/End: Complemental strand, 37652414 - 37652263
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||| |||||||||| | | ||||||| ||||||| ||| ||||||||||| |||||| ||||| ||||||||| |||||||||  || |||||||    
T  37652414 acactcacatttcaacactttttttagcacttacttttttattagatgaaatcaatgtatgttccacccctttgtgtatgttcaatttccaacgtgtaga 37652315  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaa 201  Q
      |||||| |||||||||||||| | ||||| ||| ||||||| ||||||||    
T  37652314 ttcacaatgatttaaaccaataaaaaagtgaatataagagagaatgttcaaa 37652263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 191
Target Start/End: Complemental strand, 12099036 - 12098894
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||| |||||||||  ||||| ||||| || || ||| ||| ||||||||||||||||||| | ||||||||| | ||||||||||| |||||||| |    
T  12099036 acactctcttttcaactttctctttagcattcgctattttatttgatgaaatcaaagtatgtctcgccactttgtatgagttcaattttcaaagtgtaaa 12098937  T
Q  150 cccac-aataatttaaaccaataagagagtgagtattagagag 191  Q
    | ||| ||| |||||||| ||||||||||||||||||| ||||    
T  12098936 ctcacaaatgatttaaactaataagagagtgagtattaaagag 12098894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 211
Target Start/End: Complemental strand, 35316542 - 35316409
Alignment:
Q  78 actcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagag 177  Q
    ||||||| ||| ||| ||| |||| || ||||||||||||| ||| |||   ||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  35316542 actcactcttttattagataaaattaatgtatgtcccaccattttatgttgattcaatttttaaattgtagacccacaatgatttaaatcaataagagag 35316443  T
Q  178 tgagtattagagagagtgttcaaaagaaagtgtt 211  Q
    ||||||| | | |||||| |||||||| ||||||    
T  35316442 tgagtatcataaagagtgctcaaaagagagtgtt 35316409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 15884498 - 15884594
Alignment:
Q  108 atgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |||||||||||||||||||  |||||||||| ||| |||||||||||||| |||||||||||||||| | |||||||||||||  ||| ||||||||    
T  15884498 atgtcccaccactttgtgtgggttcaattttcaaaatgtagacccacaattatttaaaccaataagataatgagtattagagattgtggtcaaaaga 15884594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 185
Target Start/End: Original strand, 17188078 - 17188211
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||  |||||||| |||||||| ||| ||||||||||||||| || | || ||||||||||||| |  |||||||| |||||||||     
T  17188078 acactcacttttcaac--tctctctatcactcactattttattggatgaaatcaatgtgtatctcaccactttgtgtgaactcaattttcaaagtgtagg 17188175  T
Q  150 cccacaataatttaaaccaataagagagtgagtatt 185  Q
    |||| ||| |||||||||||||| | | ||||||||    
T  17188176 cccagaatgatttaaaccaataaaataatgagtatt 17188211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 18511378 - 18511255
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| ||||||||| ||| |||||||| ||| ||||||| ||||||| ||||||||||| | ||| |||  |||||||||| |||||| |||    
T  18511378 acactcactttttaacactctcactatcactcactcttttattggataaaatcaatgtatgtcccactattttatgtgggttcaattttcaaagtgaaga 18511279  T
Q  150 cccacaataatttaaaccaataag 173  Q
    || |||||  ||||||||||||||    
T  18511278 cctacaatgttttaaaccaataag 18511255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 32856308 - 32856141
Alignment:
Q  50 acactcacttttcaacactctctctag----cactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtg 145  Q
    |||||||||||| ||||||||||| ||    |||| ||| ||| || ||||||||| ||  |||||  |||||||||||||  ||| |||||| ||||||    
T  32856308 acactcacttttgaacactctctccagtacgcactgactcttttatcggatgaaattaatatatgtttcaccactttgtgtgggttgaattttcaaagtg 32856209  T
Q  146 tagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||| ||| | | |||||||||||||||||| ||||||||||| || |||||||||| | ||||||||    
T  32856208 tagatccatagtgatttaaaccaataagagattgagtattagaaagggtgttcaaaatagagtgttgc 32856141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 171
Target Start/End: Complemental strand, 16719599 - 16719478
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||||| ||| ||||||  ||| ||| ||| ||||||||||| |||| |||||||| ||  |||| |||||||||| ||| ||||||    
T  16719599 acactcacttttcaacactgtctttagcacatactcttttattagatgaaatcaatgtatatcccaccatttcatgtaggttcaattttcaaaatgtaga 16719500  T
Q  150 cccacaataatttaaaccaata 171  Q
    ||| |||| |||||||||||||    
T  16719499 cccgcaatgatttaaaccaata 16719478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 472298 - 472171
Alignment:
Q  84 tttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagta 183  Q
    ||||| ||||||| ||||||   |||||| ||  ||||||||| ||||||||||| ||| | || | ||||||| ||||||||||||||||||| |||||    
T  472298 tttttaattggatcaaatcagcatatgtctcattactttgtgtgagttcaattttcaaaatatatatccacaatgatttaaaccaataagagagcgagta 472199  T
Q  184 ttagagagagtgttcaaaagaaagtgtt 211  Q
    ||| |||||||| |||||||||| ||||    
T  472198 ttaaagagagtgctcaaaagaaattgtt 472171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 196
Target Start/End: Complemental strand, 30718495 - 30718350
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| |||| |||| ||||||||| ||||||| ||| ||||||||||||| |  ||||||| | || |||||||   ||  ||||| ||||||||||    
T  30718495 acactcaattttaaacattctctctagtactcactcttttattggatgaaatcgatatatgtcc-atcattttgtgtggattgtattttcaaagtgtaga 30718397  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgt 196  Q
    | |||||| |||||||||||||| | ||||| |||||||||||||||    
T  30718396 ctcacaatgatttaaaccaataaaaaagtgaatattagagagagtgt 30718350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 211
Target Start/End: Original strand, 42182900 - 42183062
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-g 148  Q
    |||||| ||||| | |||||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||| |||  |||| ||||  |||||||| |    
T  42182900 acactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtagg 42182999  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgtt 211  Q
     || ||| | |||| | ||||||| ||||| |||    |||||||||||||||||| ||||||    
T  42183000 tcctacattgatttcacccaataaaagagttagtgccggagagagtgttcaaaagagagtgtt 42183062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 4603036 - 4602890
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||| ||| || | | ||||||| ||| |||||||||||||||  ||||| ||| |||||||| |  ||||||||||||||||| |||    
T  4603036 acactcacttttcaacgctccctttggtactcactcttttattggatgaaatcaatatatgttccatcactttgttt--gttcaatttttaaagtgcaga 4602939  T
Q  150 cccacaataatttaaacc-aataagagagtgagtattagagagagtgtt 197  Q
    || | ||| |||||||||    |||||||||| ||||||||||||||||    
T  4602938 cctataatgatttaaaccgccaaagagagtgactattagagagagtgtt 4602890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 14489626 - 14489545
Alignment:
Q  132 caatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||| | | ||||||||| ||| ||||    
T  14489626 caatttttaaagtgtagatccacaataatttaaaccaataaaagaatgagtattagagaaaattttcaaaagagagtcttgc 14489545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 28898191 - 28898042
Alignment:
Q  65 cactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga-cccacaataattta 163  Q
    |||||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||| |||  |||  ||||  |||||||||| || ||| | ||||     
T  28898191 cactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaagtgtagatcctacattgatttc 28898092  T
Q  164 aaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    | ||||||| |||||||||  || |||||||  |||||||| ||||||||    
T  28898091 atccaataaaagagtgagtgctaaagagagtactcaaaagagagtgttgc 28898042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 4964826 - 4964678
Alignment:
Q  66 actctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataatttaa 164  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| |||   ||  ||||| |||||||| | || ||| | || | |    
T  4964826 actctctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtggatttcattttcaaagtgtaggtcctacattgatctta 4964727  T
Q  165 accaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     ||||||| |||||||||  |||||||||| ||||||||| ||| ||||    
T  4964726 tccaataaaagagtgagtgctagagagagtattcaaaagagagtattgc 4964678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 2122806 - 2122969
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||| ||| |||||| || ||||| |||||| |||||||||||| ||||||  ||||||||||| |   ||| |||| || ||||||      
T  2122806 acactcacttttcaatactttctctatcaatcactctttcataggatgaaatcaatgtatgtatcaccactttgtatgcattctatttctagagtgtaag 2122905  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
      ||| || ||||||| |||||||||||||||||  ||||| | ||||||||| | ||||||||    
T  2122906 ttcactatgatttaaatcaataagagagtgagtaccagagaaaatgttcaaaaaagagtgttgc 2122969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 7919382 - 7919311
Alignment:
Q  107 tatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagt 178  Q
    ||||||||||||||||||||   ||||||||| |||||||||| ||||||| ||||||||||||||||||||    
T  7919382 tatgtcccaccactttgtgtggattcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 7919311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 187
Target Start/End: Original strand, 43414369 - 43414503
Alignment:
Q  54 tcacttttcaacactctc-tctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccc 152  Q
    ||||||||||||||| |  | ||| ||| ||||||| ||||||||||||||| |||||| | |||| |||| |||||| | ||||| | ||| |||| ||    
T  43414369 tcacttttcaacacttttgtttagtacttacttttttattggatgaaatcaatgtatgttctaccattttgcgtaagtgctattttcagagtatagatcc 43414468  T
Q  153 acaataatttaaaccaataagagagtgagtattag 187  Q
    ||||| ||||||||||| ||||| |||||||||||    
T  43414469 acaatgatttaaaccaagaagagggtgagtattag 43414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 2476547 - 2476645
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||| ||||  ||||||| ||| ||| ||| ||| ||||||| ||||||||||| ||||||||||| ||||||||| ||| ||||||    
T  2476547 acactcacttttcaacattctc--tagcacttactcttttattagataaaatcaatgtatgtcccactactttgtgtaacttcaattttcaaaatgtaga 2476644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 186
Target Start/End: Original strand, 32701489 - 32701617
Alignment:
Q  58 ttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaat 157  Q
    ||||||||||| | | |||||   ||| ||| ||||||| ||||||| |||| |||||||||||| |||| ||||||||||||| ||||| | ||| |||    
T  32701489 ttttcaacactttttttagcaactactcttttattggataaaatcaatgtatatcccaccactttatgtatgttcaatttttaacgtgtaaatccataat 32701588  T
Q  158 aatttaaaccaataagagagtgagtatta 186  Q
     |||||||||||||| | ||| |||||||    
T  32701589 gatttaaaccaataaaaaagtaagtatta 32701617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 4552925 - 4552846
Alignment:
Q  134 atttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||| || ||||||||||||||| |||||||||||||||||||||||||| ||| | | ||||||||||  ||||||||    
T  4552925 attttcaatgtgtagacccacaatgatttaaaccaataagagagtgagtatcagaaaaaatgttcaaaagtgagtgttgc 4552846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 186
Target Start/End: Complemental strand, 25730602 - 25730472
Alignment:
Q  56 acttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccaca 155  Q
    |||||| |||||||| |||| |||||||||||| |||||||| |||  | ||||||| |||||  || |||  |||| |||||||| ||||| || ||||    
T  25730602 acttttgaacactctttctaacactcacttttttattggatggaatacatgtatgtctcaccatattatgtgggttctatttttaacgtgtaaactcaca 25730503  T
Q  156 ataatttaaaccaataagagagtgagtatta 186  Q
     | |||||||||||||| ||||||| |||||    
T  25730502 gtgatttaaaccaataaaagagtgaatatta 25730472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 190
Target Start/End: Complemental strand, 27494586 - 27494480
Alignment:
Q  84 tttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagta 183  Q
    ||||| ||||||||||||||| || ||| |||||| ||| | || ||||| |||| ||||  ||||||| |||| ||||||| |||||| ||||||||||    
T  27494586 ttttttattggatgaaatcaatgtttgttccaccaatttatataggttcacttttcaaagcatagacccgcaatgatttaaatcaataaaagagtgagta 27494487  T
Q  184 ttagaga 190  Q
    |||||||    
T  27494486 ttagaga 27494480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 24497203 - 24497344
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| | |||||||| || || || |||||| |||||||||||  || |||||| ||| || |||||||   ||  ||||| ||||||||||    
T  24497203 acactcacttttgaccactctctttaacagtcgcttttttattggatgaaactaatgtatgttccatcattttgtgtggattttattttcaaagtgtaga 24497302  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagag 191  Q
    || | | | |||||||| |||| |||||||||||||||||||    
T  24497303 ccaagagtgatttaaactaataggagagtgagtattagagag 24497344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 212
Target Start/End: Complemental strand, 25238413 - 25238284
Alignment:
Q  84 tttttcattggatgaaatcaaagtatgtcccaccactt-tgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagt 182  Q
    ||||| ||| ||| ||||||| ||||||| || ||||| | |||  |||| ||||| |||||||||| ||||||| |||||||||||||| | |||||||    
T  25238413 ttttttattagataaaatcaatgtatgtctcatcacttctttgtgggttctattttcaaagtgtagatccacaatgatttaaaccaataaaaaagtgagt 25238314  T
Q  183 attagagagagtgttcaaaagaaagtgttg 212  Q
      |||||| |||||| |||||| |||||||    
T  25238313 gctagagaaagtgtttaaaagagagtgttg 25238284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 1107049 - 1107121
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    |||||| ||||| | ||||||||||||||| |||| ||| ||||| ||||||||| |||||||||||||||||    
T  1107049 acactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccacttt 1107121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 212
Target Start/End: Original strand, 6315697 - 6315832
Alignment:
Q  78 actcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataatttaaaccaataagaga 176  Q
    ||||||||||| | ||||||||||||| |||||| |||||||||| | || |||| ||||  |||||||| | || ||| ||||||   ||||||| |||    
T  6315697 actcacttttttactggatgaaatcaatgtatgttccaccactttatataggttccatttccaaagtgtaggtcctacattaattttttccaataaaaga 6315796  T
Q  177 gtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    |||| ||||| | |||||| |||||||| |||||||    
T  6315797 gtgaatattaaaaagagtgctcaaaagagagtgttg 6315832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 33678284 - 33678138
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| |||||||| | || |||| | | ||| |||| |||||||||| ||||| || ||||| | | ||  |||| ||||  || |||||||    
T  33678284 acactcacttttgaacactctttataacacttattctttaattgaatgaaatcaatgtatgcccaaccacat-gcgtgggttctatttcaaatgtgtaga 33678186  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    | ||||||||||||||||||||| | ||||| |||||||||| |||||    
T  33678185 ctcacaataatttaaaccaataaaaaagtgaatattagagagtgtgtt 33678138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 8009524 - 8009622
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag 148  Q
    |||||| ||||| |||||||| |||| ||||||||||||  ||||||||||||||  |||||| ||||||||| |||   ||| ||||||| |||||||    
T  8009524 acactctcttttgaacactctttctaacactcacttttttgttggatgaaatcaacatatgtctcaccactttatgtggtttccatttttagagtgtag 8009622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 43400146 - 43400216
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    |||| ||||||||||||||||||| |||||||||| | |||||||||||  |  |||||||||||||||||    
T  43400146 actctcttttcaacactctctctaacactcactttcttattggatgaaactagtgtatgtcccaccacttt 43400216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 172
Target Start/End: Complemental strand, 45270720 - 45270603
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||||||| | |||||| |||| ||||||| ||||||| |||| || ||||||  ||| | ||||||| | ||| ||||| |||||||| || ||    
T  45270720 tcacttttcaacattttctctaacact-acttttttattggataaaattaatgtatgtatcactattttgtgtgaattcgattttgaaagtgtaaactca 45270622  T
Q  154 caataatttaaaccaataa 172  Q
    |||| ||||||||||||||    
T  45270621 caatgatttaaaccaataa 45270603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 214
Target Start/End: Complemental strand, 24895408 - 24895271
Alignment:
Q  78 actcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataatttaaaccaataagaga 176  Q
    ||||||| ||| | ||||| ||||||| |||| | |||||| ||| ||| ||||| ||||  |||||||| |||||||| | |||||| ||||| | |||    
T  24895408 actcactcttttaatggataaaatcaatgtatattccaccattttatgtgagttccatttccaaagtgtatgacccacattgatttaacccaatgaaaga 24895309  T
Q  177 gtgagtattagagagagtgttcaaaagaaagtgttgcc 214  Q
    |||||| ||||||||||| | ||||||| || ||||||    
T  24895308 gtgagtgttagagagagtatccaaaagagagagttgcc 24895271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 15508925 - 15509089
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||| ||||| |||||||| |||| |||||||| ||| ||||  ||||||||| ||||||||||||| ||| |||  |||| ||||  ||||||||||    
T  15508925 acactctcttttgaacactctttctaacactcactcttttattgagtgaaatcaatgtatgtcccaccattttttgtgggttccatttccaaagtgtaga 15509024  T
Q  150 -cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     || ||| | |||| | ||||| | ||||| |||  || |||||||| | |||||| ||||||||    
T  15509025 tcctacattgatttcacccaattaaagagtaagtgatatagagagtgctaaaaagagagtgttgc 15509089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 212
Target Start/End: Original strand, 37228509 - 37228673
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatg-aaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta- 147  Q
    |||||| ||||| | |||||||||||||||||||| ||| ||||| || |||| || ||||||||||||||||| |||  ||||  |||| |||||| |     
T  37228509 acactctcttttgagcactctctctagcactcactcttttattgggtgaaaattaatgtatgtcccaccactttatgtgggttccgttttcaaagtgcag 37228608  T
Q  148 gacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    | || ||| | |||| | ||||||| | |||||||  |||| |||||| |||||||| |||||||    
T  37228609 gtcctacattgatttcacccaataaaaaagtgagtgctagaaagagtgctcaaaagagagtgttg 37228673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 213
Target Start/End: Original strand, 1110227 - 1110373
Alignment:
Q  68 tctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataatttaaac 166  Q
    |||||||| |||||||| ||| ||||  ||||||||| ||||||||||||||||| |||  |||| ||||  ||||| || | || ||| | |||| | |    
T  1110227 tctctctaacactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtatatgtcctacattgatttcacc 1110326  T
Q  167 caataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||| ||||||| | ||||| |||||| |||||| | ||||||||    
T  1110327 caataaaagagtgaatgttagaaagagtgctcaaaaaagagtgttgc 1110373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 10339784 - 10339849
Alignment:
Q  57 cttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    ||||| |||||||||||||||||||||| ||| |||||   ||||||| | |||||||||||||||    
T  10339784 cttttgaacactctctctagcactcactattttattggggaaaatcaatgaatgtcccaccacttt 10339849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 213
Target Start/End: Complemental strand, 19193673 - 19193508
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgt-a 147  Q
    ||||||| ||||||||||||||||  | |||||| | | | ||||||| ||| ||| ||||| |||||||||||  || |   | ||||  ||||| | |    
T  19193673 gacactctcttttcaacactctcttgaacactcattctcttattggataaaaccaatgtatgacccaccactttaagtgaaacctatttccaaagtatga 19193574  T
Q  148 gacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||| || |||||||| ||| ||| ||||||| || ||||||||||| |||||| ||||||||    
T  19193573 gacccaccatgatttaaactaattagaaagtgagtgttggagagagtgttgaaaagagagtgttgc 19193508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 30849283 - 30849384
Alignment:
Q  85 ttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtat 184  Q
    |||| ||| ||||||||||| ||| ||||||||| ||||| |  |||| ||||||||||  || | ||||||| ||||||| |||||||| |||| ||||    
T  30849283 tttttattagatgaaatcaatgtacgtcccaccaatttgtatgggttctatttttaaaggataaatccacaatgatttaaatcaataagaaagtgcgtat 30849382  T
Q  185 ta 186  Q
    ||    
T  30849383 ta 30849384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 31395614 - 31395542
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    |||||| ||||| | |||||||| |||||||||||  || ||||| ||||||||| ||||||||| |||||||    
T  31395614 acactctcttttgagcactctctttagcactcactcctttattgggtgaaatcaatgtatgtccctccacttt 31395542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 17460974 - 17461021
Alignment:
Q  147 agacccacaataatttaaaccaataagagagtgagtattagagagagt 194  Q
    |||| ||||||||||||||  ||||||||||||| |||||||||||||    
T  17460974 agacacacaataatttaaattaataagagagtgaatattagagagagt 17461021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 6420526 - 6420460
Alignment:
Q  147 agacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| || |||||| ||||||||| |||||||  | ||||||||||| |||||| ||||||||    
T  6420526 agacccaccatgatttaagccaataagaaagtgagtggtggagagagtgttgaaaagagagtgttgc 6420460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 15508968 - 15508922
Alignment:
Q  167 caataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||| ||||||||| ||||| ||||||||||||||| ||||||||    
T  15508968 caataaaagagtgagtgttagaaagagtgttcaaaagagagtgttgc 15508922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 25666762 - 25666700
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtc 112  Q
    ||||||| |||||||||||||||| | || ||||| ||| || |||||||||||| |||||||    
T  25666762 acactcatttttcaacactctctcaaacattcactcttttatcggatgaaatcaatgtatgtc 25666700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 30706378 - 30706444
Alignment:
Q  147 agacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||||  ||||||||||||| || | ||||||| || ||||||||||| |||||| ||||||||    
T  30706378 agacccaccttaatttaaaccaacaataaagtgagtgtttgagagagtgttgaaaagagagtgttgc 30706444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 37228671 - 37228617
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaa 104  Q
    |||||| ||||| | |||||| ||||||||||||||||| ||||| |||||||||    
T  37228671 acactctcttttgagcactctttctagcactcacttttttattgggtgaaatcaa 37228617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 41805931 - 41805873
Alignment:
Q  64 acactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    ||||| ||| || |||||||| ||| ||||||| ||||||| |||||||||||||||||    
T  41805931 acactttctttaacactcactcttttattggataaaatcaatgtatgtcccaccacttt 41805873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 42579708 - 42579662
Alignment:
Q  167 caataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||| ||||||||||| ||||| |||||||| |||||||||||||||    
T  42579708 caattagagagtgagttttagaaagagtgtttaaaagaaagtgttgc 42579662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 80444 - 80403
Alignment:
Q  153 acaataatttaaaccaataagagagtgagtattagagagagt 194  Q
    |||||||||||||||||||| | | |||||||||||||||||    
T  80444 acaataatttaaaccaataaaaaaatgagtattagagagagt 80403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 25238286 - 25238339
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatca 103  Q
    |||||| ||||| |||||| ||||||||||||||||||| ||||| | ||||||    
T  25238286 acactctcttttaaacactttctctagcactcacttttttattggtttaaatca 25238339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 37077970 - 37078043
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    ||||||| |||||||||||| |||||| ||| |||| | | |||||||| ||| |  |||||||||||||||||    
T  37077970 gacactctcttttcaacactttctctaacacacactctcttattggatgtaattagtgtatgtcccaccacttt 37078043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 1e-53; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 50 - 212
Target Start/End: Complemental strand, 24056094 - 24055932
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||| |||||| |||||||| || ||| ||  |||||||| || ||||||||||||||||||||||||||||||||| ||||||||||    
T  24056094 acactcacttttcaacgctctctttagcactcgctcttttatcagatgaaattaatgtatgtcccaccactttgtgtaagttcaattttcaaagtgtaga 24055995  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    |||||||| |||||||||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  24055994 cccacaattatttaaaccaataagagagtgagtgttagagaaagtgttcaaaagagagtgttg 24055932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 16983405 - 16983568
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||||||| |||||||||||||  || ||||||| ||||||   ||||||||| |||||||||   |||||||||| ||||||||||    
T  16983405 acactcacttttcaacactctatctagcactcactgatttattggataaaatcattttatgtcccatcactttgtgggggttcaattttcaaagtgtaga 16983504  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    | |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16983505 ctcacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgc 16983568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 32072112 - 32072255
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||| || |||||||||||||||||||||  |||||||||||||||||||||||||    
T  32072112 tcacttttcaacactctctctagcactcactcttttattggatgaaatgaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgtagaccca 32072211  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    |||| ||||||| |||||||||| || | |||||||||||||||    
T  32072212 caattatttaaatcaataagagaatgggcattagagagagtgtt 32072255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 50 - 204
Target Start/End: Complemental strand, 28414038 - 28413885
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||||||||||||||| |||||||||| ||| ||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  28414038 acactcacttttcaacactctctctagcgctcacttttttattcgatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtataga 28413939  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |||| ||| |||||||||||||| ||| |||||||||| | ||||||||||||||    
T  28413938 cccataatgatttaaaccaataaaagaatgagtattag-gcgagtgttcaaaaga 28413885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 56 - 201
Target Start/End: Complemental strand, 9952920 - 9952775
Alignment:
Q  56 acttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccaca 155  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  9952920 acttttcaacactctctctagcactcatttttttattggatgaaatcaatgcatgtcccaccactttgtgtgagttcaattttcaaagtgtaaacccaca 9952821  T
Q  156 ataatttaaaccaataagagagtgagtattagagagagtgttcaaa 201  Q
    || |||||||||||||||| | ||||||||  ||||||||||||||    
T  9952820 atgatttaaaccaataagataatgagtatttaagagagtgttcaaa 9952775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 53 - 213
Target Start/End: Complemental strand, 34861351 - 34861198
Alignment:
Q  53 ctcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccc 152  Q
    ||||||||||||||||||||  |||||||||| ||| ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||     |||    
T  34861351 ctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtaggttcaattttcaaagt-----ccc 34861259  T
Q  153 acaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||    
T  34861258 acaataatttaaaccaataagagagtgagtattagggagggtgttcaaaagagagtgttgc 34861198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 1977340 - 1977188
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacc 151  Q
    |||||||||| |||||||||||||||||||||| ||   |||||||||||||| |||||||| ||||||||||||  |||||||||| |||||||||| |    
T  1977340 actcactttttaacactctctctagcactcactcttctgttggatgaaatcaatgtatgtccaaccactttgtgtgggttcaattttcaaagtgtagatc 1977241  T
Q  152 cacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||||||||||    
T  1977240 cacaatgatttaaaccaataaaagagtgagtattagagagtgtgttcaaaaga 1977188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 14236349 - 14236496
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||| |||||||||||| | |||| |||||| ||||| |||||| ||||| ||| |||||||||||||||||||||||||||||||| |||||||||     
T  14236349 acactctcttttcaacactttttctaccactcatttttttattggaagaaattaaaatatgtcccaccactttgtgtaagttcaattttgaaagtgtagg 14236448  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||    
T  14236449 cgcacaataatttaaaccaacaagagagtgagtattagagagagtgtt 14236496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 50 - 212
Target Start/End: Original strand, 8903863 - 8904025
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| ||||||||||||||||||| |||||||| || ||| ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||    
T  8903863 acactcatttttcaacactctctctagtactcacttgtttatttgatgaaatcaatgtatgtcccaccactttgtgtcggttcaattttcaaagtgtaga 8903962  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    |||||||| |||||||||||||||||||| |||| |||| |   ||||||||||| |||||||    
T  8903963 cccacaatgatttaaaccaataagagagtaagtaatagaaaagatgttcaaaagagagtgttg 8904025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 62 - 204
Target Start/End: Complemental strand, 17499390 - 17499248
Alignment:
Q  62 caacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatt 161  Q
    ||||||||||||||||||||  | ||| |||||||||||||||  |||||||||||| |||||||  |||||||||| |||||||||| ||||||| |||    
T  17499390 caacactctctctagcactctatcttttattggatgaaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgtagatccacaatgatt 17499291  T
Q  162 taaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  17499290 taaaccaataagagagtgagtattagagagagttgtcaaaaga 17499248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 5979891 - 5980053
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||| ||||||||||||||||||||| |  |||| ||  ||||||||| ||||| |||||||||||||||||||||  |||||||||| |||||||  |    
T  5979891 acacttacttttcaacactctctctagtagacactcttctattggatgagatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtgaa 5979990  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    | ||||||  ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5979991 ctcacaatggttt-aaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgc 5980053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 35151898 - 35151735
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| |||||||| | ||||| | ||| ||| ||||||||||||||| ||||||||||||| ||||||    ||||||||||||||||||||    
T  35151898 acactcactttttaacactctttttagcatttactcttttattggatgaaatcaatgtatgtcccaccattttgtggggattcaatttttaaagtgtaga 35151799  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||||||| |||| ||||||| ||||| ||||| | ||||||||||||||| ||||||||    
T  35151798 cccacaataattcaaactaataagaaagtgaatattaaatagagtgttcaaaagagagtgttgc 35151735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 63 - 212
Target Start/End: Complemental strand, 6098931 - 6098784
Alignment:
Q  63 aacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataattt 162  Q
    ||||||||||||| ||||||| |||| || ||||||||| |  |||| ||||||||||||||| | |||||||||| |||||||||| ||||||||||||    
T  6098931 aacactctctctaacactcacatttttataggatgaaatta--gtatatcccaccactttgtgcatgttcaattttcaaagtgtagatccacaataattt 6098834  T
Q  163 aaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    ||| |||||||||||||||||||||||||| |||| |||||| |||||||    
T  6098833 aaatcaataagagagtgagtattagagagaatgtttaaaagagagtgttg 6098784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 8914782 - 8914929
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| | | ||||||||| |||||||| ||||||||||| ||| ||| |||||||||||||||||||||  ||||| |||| ||||||||||    
T  8914782 acactcacttttgagcgctctctctaacactcactctttcattggataaaaccaatgtatgtcccaccactttgtgtgggttcatttttcaaagtgtaga 8914881  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    |||||||| ||||||||||||||||||||| ||   ||||||||||||    
T  8914882 cccacaatgatttaaaccaataagagagtgggtgacagagagagtgtt 8914929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 41727441 - 41727588
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| |||||||||| ||||| ||||| |||  || ||| ||||||| |||||||||||| ||||||||| ||||  ||||||| |||||||    
T  41727441 acactcacttttgaacactctctttagcaatcactcttttgttagataaaatcaatgtatgtcccaccgctttgtgtaggttctgtttttaatgtgtaga 41727540  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    | || ||| ||||||||||| |||||||||||||||||||||||||||    
T  41727541 ctcataatgatttaaaccaacaagagagtgagtattagagagagtgtt 41727588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 35689491 - 35689651
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgt-ag 148  Q
    |||||| ||||| | |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||| ||||| ||||||| ||    
T  35689491 acactctcttttgagcactctctctagcactcacttttttattggatgaaatcaatgtatgtcccaccactttatgtgagttccattttcaaagtgtaag 35689590  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtg 209  Q
     |||||| |  ||| | ||||||| | |||||||  ||||||||||| |||||||| ||||    
T  35689591 tcccacattgttttcacccaataaaaaagtgagtgctagagagagtgctcaaaagagagtg 35689651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 64 - 213
Target Start/End: Complemental strand, 13407479 - 13407329
Alignment:
Q  64 acactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataattt 162  Q
    |||||||||||| |||| ||||||| ||||||| ||||||| ||||||||||||| |||  ||  |||| ||||| |||||||| |||||||| | ||||    
T  13407479 acactctctctaacactaacttttttattggataaaatcaatgtatgtcccaccattttaagtgggttctattttcaaagtgtatgacccacattgattt 13407380  T
Q  163 aaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    || ||||| ||||| ||||| ||||||||||||||||||||| ||||||||    
T  13407379 aacccaatgagagaatgagtgttagagagagtgttcaaaagagagtgttgc 13407329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 62 - 212
Target Start/End: Complemental strand, 36804996 - 36804846
Alignment:
Q  62 caacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatt 161  Q
    ||||||||||||||  ||| ||| | | |||||||| |||||| ||||||||||||| |||||||  |||||||||| ||| | || | |||||||||||    
T  36804996 caacactctctctaatactaactatattattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaaatatacatccacaataatt 36804897  T
Q  162 taaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    |||| |||||||||||| ||||||||||||| |||| |||||| |||||||    
T  36804896 taaatcaataagagagtaagtattagagagaatgttgaaaagagagtgttg 36804846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 43506549 - 43506687
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| ||||||||||  | |||||||||||| |||||||  |||||| |||||| ||||||||||||||  |||| | ||| || |||||||    
T  43506549 acactcacttttgaacactctct--aacactcacttttt-attggatataatcaatgtatgttccaccactttgtgtgggttctactttcaatgtgtaga 43506645  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagag 191  Q
    |||||||| |||||| ||||||||||||||||||||||||||    
T  43506646 cccacaatgatttaagccaataagagagtgagtattagagag 43506687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 50 - 211
Target Start/End: Original strand, 31301126 - 31301286
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| |||||| | ||  ||||||||| ||| ||||||||||||||| |||||| |||||||||||||| ||||| ||||| || |||||||    
T  31301126 acactcacttttgaacactatttccggcactcactcttttattggatgaaatcaatgtatgttccaccactttgtgtgagttctattttcaatgtgtaga 31301225  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgtt 211  Q
      || |||||||||||||||||||||| ||| |||| |||| | ||| ||||||| ||||||    
T  31301226 -tcataataatttaaaccaataagagaatgaatatttgagataatgtacaaaagagagtgtt 31301286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 7493514 - 7493357
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaatcaaa----gtatgtcccaccactttgtgtaag-ttcaatttttaaagtgt 146  Q
    |||||||||| ||||||||||||| |||| | ||||| |||||||||||||| |    || ||||  ||||||||||||  | ||| ||||| |||||||    
T  7493514 actcacttttaaacactctctctaacacttatttttttattggatgaaatcatatattgtgtgtcttaccactttgtgttgggttctattttcaaagtgt 7493415  T
Q  147 agacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |||| |||||| |||||||||||||||||||||||||||||| |||||||||| ||||    
T  7493414 agactcacaatgatttaaaccaataagagagtgagtattagaaagagtgttcataaga 7493357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 49 - 204
Target Start/End: Complemental strand, 11962851 - 11962697
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag 148  Q
    ||||||||||||||||||| |||| ||  ||||||| ||| |||| || |||||||||||| |||||||| ||| |||| |||||||||| |||||||||    
T  11962851 gacactcacttttcaacacgctctttaatactcactcttttattgaataaaatcaaagtatatcccaccattttatgtaggttcaattttcaaagtgtag 11962752  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    | ||| ||| |||||||||||||| | || ||||||||   |||||||||||||||    
T  11962751 atcca-aatgatttaaaccaataaaaaagcgagtattaacaagagtgttcaaaaga 11962697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 83 - 202
Target Start/End: Original strand, 13214539 - 13214658
Alignment:
Q  83 ctttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagt 182  Q
    |||||| |||||||| ||| || |||||||||| || ||||||||  ||||||||| ||||||||||||||||||| | ||||| |||||||||| ||||    
T  13214539 cttttttattggatggaattaatgtatgtcccatcattttgtgtagattcaattttcaaagtgtagacccacaatattataaactaataagagagcgagt 13214638  T
Q  183 attagagagagtgttcaaaa 202  Q
    ||||| ||||||||||||||    
T  13214639 attagggagagtgttcaaaa 13214658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 23685146 - 23685297
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||  |||||||||  |||||||||| ||| ||||||||||||||| ||||||||||||||||| ||  ||||| ||||  ||||||||||  |     
T  23685146 tcacttttgcacactctcttaagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagattcg 23685245  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtg 209  Q
    |||| |||||||||||||    ||| ||||||||||||||||||||||||| ||||    
T  23685246 caatgatttaaaccaata----agttagtattagagagagtgttcaaaagagagtg 23685297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 35797426 - 35797551
Alignment:
Q  70 tctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaa 169  Q
    ||||||||| ||||| ||| ||||||| ||||||| |||||| |||||||||||||  |||||||||||||||||||| | ||||||| ||||||| |||    
T  35797426 tctctagcattcactcttttattggataaaatcaatgtatgttccaccactttgtgcgagttcaatttttaaagtgtaaatccacaatgatttaaatcaa 35797525  T
Q  170 taagagagtgagtattagagagagtgtt 197  Q
    ||  ||||||||||||  ||||||||||    
T  35797526 ta--agagtgagtattgtagagagtgtt 35797551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 194
Target Start/End: Complemental strand, 17741683 - 17741552
Alignment:
Q  63 aacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataattt 162  Q
    |||||||||||||||||  | || || ||||||||||||||| ||||||||||||| ||||||  ||||||||||| |||||||||||| | |||  |||    
T  17741683 aacactctctctagcacgtaattgtttattggatgaaatcaatgtatgtcccaccattttgtgagagttcaattttcaaagtgtagacctataatggttt 17741584  T
Q  163 aaaccaataagagagtgagtattagagagagt 194  Q
    ||||||||||   | |||||||||||||||||    
T  17741583 aaaccaataaagaaatgagtattagagagagt 17741552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 45246459 - 45246607
Alignment:
Q  64 acactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataattta 163  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||| ||||||| ||||||||| ||  ||||| ||||  |||||||||| |  |||| |||||    
T  45246459 acactctctttagcactcactattttattggataaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgattta 45246558  T
Q  164 aaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    || ||||||||||| | ||||  |||||||| ||||||||| |||||||    
T  45246559 aatcaataagagagggggtataggagagagtattcaaaagagagtgttg 45246607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 6387591 - 6387726
Alignment:
Q  69 ctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataatttaaacc 167  Q
    ||||||| |||||||| ||| ||||||| ||||||| ||||||||||||| ||| |||  |||| ||||  ||||| || |||||||| |  ||||| ||    
T  6387591 ctctctaacactcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaagtatacgacccacattgttttaaccc 6387690  T
Q  168 aataagagagtgagtattagagagagtgttcaaaag 203  Q
    ||||||||| ||||| ||||||||||||| ||||||    
T  6387691 aataagagaatgagtgttagagagagtgtccaaaag 6387726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 9193449 - 9193556
Alignment:
Q  106 gtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaa 205  Q
    ||||||| ||| ||||||||||||||||||||| |||||||||||| ||||||||| |||||||||| | | || ||||||  ||  |||| |||||||     
T  9193449 gtatgtctcactactttgtgtaagttcaattttcaaagtgtagacctacaataattaaaaccaataaaaaaatgtgtattaatgatcgtgtacaaaagag 9193548  T
Q  206 agtgttgc 213  Q
    ||||||||    
T  9193549 agtgttgc 9193556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 161
Target Start/End: Original strand, 1961295 - 1961404
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacc 151  Q
    ||||||||||| |  ||||||||| |||| | | ||| ||||||| ||||||| ||| |||||||||||||| ||  |||||||||| ||||||||||||    
T  1961295 actcacttttcgatgctctctctaccacttaatcttttattggataaaatcaaggtacgtcccaccactttgcgtgggttcaattttcaaagtgtagacc 1961394  T
Q  152 cacaataatt 161  Q
     |||||||||    
T  1961395 aacaataatt 1961404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 212
Target Start/End: Original strand, 4674949 - 4675079
Alignment:
Q  78 actcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagag 177  Q
    ||||||| ||| ||| |||||||||||    ||||| | |||||||||| |||| |||||| ||||||||| | |||||| |||||||||||||| | |     
T  4674949 actcactcttttattagatgaaatcaa----tgtcctatcactttgtgtgagtttaattttcaaagtgtagtcacacaatgatttaaaccaataaaaaaa 4675044  T
Q  178 tgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    ||| ||||||| ||||||||||||| | |||||||    
T  4675045 tgaatattagaaagagtgttcaaaatagagtgttg 4675079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 9192048 - 9192126
Alignment:
Q  86 tttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaa 164  Q
    |||||| |||| ||||||| |||| ||||||||||||||||  |||||||||||||| ||||||| |||||| ||||||    
T  9192048 tttcatcggataaaatcaatgtatatcccaccactttgtgtgggttcaatttttaaattgtagactcacaatgatttaa 9192126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 213
Target Start/End: Original strand, 34952504 - 34952617
Alignment:
Q  100 atcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttca 199  Q
    ||||| ||||||||||||| ||||||  | ||||||||| ||  ||||||||| |||| ||||||||||| |  | | | ||||||||||||||||||||    
T  34952504 atcaatgtatgtcccaccattttgtgggatttcaattttcaatatgtagacccgcaatgatttaaaccaagagaaaaataagtattagagagagtgttca 34952603  T
Q  200 aaagaaagtgttgc 213  Q
    ||| | ||||||||    
T  34952604 aaaaatagtgttgc 34952617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 202
Target Start/End: Complemental strand, 4319902 - 4319750
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||| |||||||||| | | ||| ||||| | ||||||| ||| ||| ||||||| | ||||| || |||||||||| | || |||||| ||||||||||    
T  4319902 acacccacttttcaatattttctttagcatttacttttttattagataaaatcaatgcatgtctcatcactttgtgtgaatttaattttcaaagtgtaga 4319803  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaa 202  Q
    || ||| ||||||||| |||||| | | ||| | ||||||||| |||| ||||    
T  4319802 cctacactaatttaaatcaataaaaaaatgaatgttagagagaatgttaaaaa 4319750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 17716864 - 17716969
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||| |||||| |  | |||||||  ||| |||||||||||||||  |||||||||| | ||| |||  ||| |||||| ||||||||||    
T  17716864 acactcacttttcatcactcttt--aacactcacagttttattggatgaaatcaatatatgtcccactattttatgtgggtttaattttcaaagtgtaga 17716961  T
Q  150 cccacaat 157  Q
    ||||||||    
T  17716962 cccacaat 17716969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 39023441 - 39023509
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccacca 118  Q
    |||||||| ||| |||  ||||||||||||||| || || ||||||||||||||| |||||||||||||    
T  39023441 acactcacgttttaacggtctctctagcactcatttatttattggatgaaatcaatgtatgtcccacca 39023509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 5727328 - 5727403
Alignment:
Q  136 ttttaaagtgtagaccc-acaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    ||||||| ||||||| | ||||| |||||||||||||| | |||||||| ||||||| ||||| ||||||||||||    
T  5727328 ttttaaaatgtagactctacaatgatttaaaccaataaaaaagtgagtactagagagggtgtttaaaagaaagtgt 5727403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 28212044 - 28211961
Alignment:
Q  61 tcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagt 144  Q
    ||||| ||||||||||||||||||| || ||||| |||||||||  |||||| ||||| ||| |||  |||| |||||||||||    
T  28212044 tcaacgctctctctagcactcacttatttattgggtgaaatcaatatatgtctcaccattttatgtgggttccatttttaaagt 28211961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 5095826 - 5095788
Alignment:
Q  153 acaataatttaaaccaataagagagtgagtattagagag 191  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  5095826 acaatgatttaaaccaataagagagtgagtattagagag 5095788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 35819199 - 35819265
Alignment:
Q  106 gtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataa 172  Q
    ||||||||||||| |||||||  | |||||||| ||||| |||||||||||| |||||||| |||||    
T  35819199 gtatgtcccaccattttgtgtgggctcaattttcaaagtatagacccacaatgatttaaactaataa 35819265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 45525046 - 45524972
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttg 123  Q
    ||||||| ||||||||||||||||  | |||||| ||| | ||||||| ||||||| ||||| ||||||||||||    
T  45525046 gacactctcttttcaacactctcttcaacactcattttcttattggataaaatcaatgtatgacccaccactttg 45524972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 28700625 - 28700564
Alignment:
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    |||||||  ||||||| ||||||||||||||||| ||||||||||||||  ||||| |||||    
T  28700625 acccacataaatttaacccaataagagagtgagtgttagagagagtgttagaaagagagtgt 28700564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 122
Target Start/End: Complemental strand, 7599583 - 7599519
Alignment:
Q  58 ttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    |||| |||||||||||||||||  ||| ||| ||||||||||||||| |||| ||||| ||||||    
T  7599583 ttttgaacactctctctagcacctactcttttattggatgaaatcaatgtatatcccagcacttt 7599519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 17915926 - 17915986
Alignment:
Q  153 acaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||| |||||||| ||||| | |||||||||||||||||||||| |||| | ||||||||    
T  17915926 acaatgatttaaactaataataaagtgagtattagagagagtgtttaaaaaagagtgttgc 17915986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 170
Target Start/End: Complemental strand, 3099809 - 3099691
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacc 151  Q
    ||||| |||| |||||| ||||  | ||||| | ||| ||| |||| |||||| |||||| |||||| ||||||| ||||  ||||  ||||| ||| |     
T  3099809 actcatttttgaacactatctcccgtactcattcttttattagatggaatcaatgtatgttccaccattttgtgtgagttatatttccaaagtatagtct 3099710  T
Q  152 cacaataatttaaaccaat 170  Q
    |||||||||||||||||||    
T  3099709 cacaataatttaaaccaat 3099691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 26637666 - 26637588
Alignment:
Q  94 gatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataa 172  Q
    |||||||| || |||||| | |||| ||||||||||||| ||| | ||| ||||||  |||||||||||||| ||||||    
T  26637666 gatgaaattaatgtatgttcaaccattttgtgtaagttcgattctcaaaatgtagattcacaataatttaaatcaataa 26637588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 8671070 - 8671123
Alignment:
Q  160 tttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||| ||||| | |||||||||||||||||| |||||||||| | ||||||    
T  8671070 tttaaactaataaaatagtgagtattagagagagcgttcaaaagagaatgttgc 8671123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 11574160 - 11574201
Alignment:
Q  170 taagagagtgagtattagagagagtgttcaaaagaaagtgtt 211  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||    
T  11574160 taagagagtgagtgttaaagagagtgttcaaaagagagtgtt 11574201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 13856559 - 13856510
Alignment:
Q  55 cacttttcaacactctctctagcactcactttttcattggatgaaatcaa 104  Q
    ||||| ||||||||||||||| ||| |||| ||| |||||||||||||||    
T  13856559 cacttctcaacactctctctaacacccactcttttattggatgaaatcaa 13856510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 35689651 - 35689602
Alignment:
Q  51 cactcacttttcaacactctctctagcactcactttttcattggatgaaa 100  Q
    ||||| ||||| | |||||||||||||||||||||||| ||||| |||||    
T  35689651 cactctcttttgagcactctctctagcactcacttttttattgggtgaaa 35689602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 197
Target Start/End: Original strand, 9453513 - 9453621
Alignment:
Q  90 attggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataatttaaaccaataagagagtgagtattaga 188  Q
    ||||||||||| ||| | |||||||| ||||||  ||  ||||  |||| ||| |||| ||||||||   |||||| ||||| ||||||||||||||| |    
T  9453513 attggatgaaaccaatgcatgtcccatcactttacgtgggttcccttttcaaaatgtatgacccacatagatttaacccaattagagagtgagtattaaa 9453612  T
Q  189 gagagtgtt 197  Q
    |||||||||    
T  9453613 gagagtgtt 9453621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 10659938 - 10659775
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttc-attggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag 148  Q
    ||||||||||||||| |||||||||| ||||||||||||  || |||||||||||| | |||||| ||||||||||||| |||||||||| |||||||||    
T  10659938 acactcacttttcaatactctctctaacactcactttttttatgggatgaaatcaatggatgtccgaccactttgtgtaggttcaattttcaaagtgtag 10659839  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||| || ||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  10659838 acccacgatgatttaaaccaataagagagtg-gtattagagaaagtgttcaaaagaaaatgttgc 10659775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 8899025 - 8899188
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||| || ||||| ||||  || ||| ||| |||||||| || |||||||||||| ||||||||  |||||||||| |||||||||     
T  8899025 acactcacttttcaacattccctctaacacttgctatttaattagatgaaataaaggtatgtcccacccctttgtgtgggttcaattttcaaagtgtagg 8899124  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  8899125 tccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagagattgttgc 8899188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 26980431 - 26980268
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||||||||||||  ||||||| | | ||||||||||||||| ||||||||||||| ||||||| ||||||||||| ||| | || |    
T  26980431 acactcacttttcaacactctctctaatactcactctattattggatgaaatcaatgtatgtcccaccattttgtgtgagttcaattttcaaaatataca 26980332  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     ||||||| ||||||| |||||||||||||||||||| |||||||||| |||||| ||||||||    
T  26980331 tccacaatgatttaaatcaataagagagtgagtattatagagagtgttgaaaagagagtgttgc 26980268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 6133793 - 6133631
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||| ||||||||||||||||  ||| |||||||||||||||  ||||||||||||  ||||||  |||||||||| ||||| || |    
T  6133793 acactcacttttcaacaatctctctagcactcacccttttattggatgaaatcaatatatgtcccaccatattgtgtgggttcaattttcaaagtctaca 6133694  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| | |||||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  6133693 cccacaatga-ttaaaccaataagagagtgagtattagagaggatgttcaaaagagagtgttgc 6133631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 62 - 213
Target Start/End: Complemental strand, 32211941 - 32211790
Alignment:
Q  62 caacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatt 161  Q
    |||||||||||| |||||||||| ||| ||| ||||||||||| |||||||| || ||||||||| |||||||||||||| ||||||||||||||| |||    
T  32211941 caacactctctccagcactcactcttttattagatgaaatcaatgtatgtccaactactttgtgtgagttcaatttttaaggtgtagacccacaatgatt 32211842  T
Q  162 taaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||||||||||||||  |||| ||| |||||| |||||| ||||||||    
T  32211841 taaaccaataagagagtgatcattaaagaaagtgttgaaaagagagtgttgc 32211790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 54 - 204
Target Start/End: Complemental strand, 19101766 - 19101616
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||  ||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||  ||||| ||||| |||||||||| |      
T  19101766 tcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctattttcaaagtgtagatctg 19101667  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  19101666 caatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaaga 19101616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 41958096 - 41958241
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||||||||   ||||||||||  || ||||||||||||||| ||||||||||||| ||||||   |||||||||| ||||||||||    
T  41958096 acactcacttttcaacactctca--agcactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgggggttcaattttcaaagtgtaga 41958193  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    |||||| | |||||||||||||||||||||||||||||| ||||||||    
T  41958194 cccacagtgatttaaaccaataagagagtgagtattagaaagagtgtt 41958241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 28218217 - 28218052
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| |||||||| |||||| ||||| ||||| ||| ||||||||||||||| ||||||| |||||||||||||   ||||||||| ||||||||||    
T  28218217 acactcatttttcaaccctctctttagcattcactcttttattggatgaaatcaatgtatgtctcaccactttgtgtggattcaattttcaaagtgtaga 28218118  T
Q  150 cccacaataatttaaaccaataagagagtgagtattaga--gagagtgttcaaaagaaagtgttgc 213  Q
     ||||| |||||||||  ||||||| |||||||||||||  | |||||||||||||| ||||||||    
T  28218117 accacagtaatttaaattaataagatagtgagtattagagcgggagtgttcaaaagagagtgttgc 28218052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 213
Target Start/End: Complemental strand, 30679051 - 30678917
Alignment:
Q  79 ctcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagt 178  Q
    |||||| ||||| ||||| ||||||| |||||||||||||||||||||  |||||||||| ||||||||||| |||||| |||||| |||||||||||||    
T  30679051 ctcactctttcaatggataaaatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtagactcacaatgatttaagccaataagagagt 30678952  T
Q  179 gagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||| |||||||||||| |||||| | ||||||||    
T  30678951 gagtgttagagagagtgctcaaaaaagagtgttgc 30678917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 55 - 201
Target Start/End: Original strand, 33193066 - 33193212
Alignment:
Q  55 cacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccac 154  Q
    ||||||| |||| ||||| ||  |||||||| || ||||||||||||||| |||||| |||||| ||||||   |||||||||| |||||||||||||||    
T  33193066 cactttttaacattctctataatactcacttatttattggatgaaatcaatgtatgtgccaccattttgtgagggttcaattttcaaagtgtagacccac 33193165  T
Q  155 aataatttaaaccaataagagagtgagtattagagagagtgttcaaa 201  Q
    ||| |||||||||||||||||| ||||||||||||| ||||||||||    
T  33193166 aatgatttaaaccaataagagaatgagtattagagaaagtgttcaaa 33193212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 8741394 - 8741229
Alignment:
Q  50 acactcacttttcaacactctctct--agcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta 147  Q
    ||||||||||||||| |||||||||  ||   ||||||||| ||||||||||||||| ||||||| ||| | |||||||  |||||||||| ||||| ||    
T  8741394 acactcacttttcaaaactctctctttagtggtcacttttttattggatgaaatcaatgtatgtctcactaatttgtgtgggttcaattttcaaagtata 8741295  T
Q  148 gacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     || |||||| |||||||| ||||||||||||||||||||||| | ||||||||||| ||||||||    
T  8741294 aacacacaatgatttaaactaataagagagtgagtattagagaaattgttcaaaagagagtgttgc 8741229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 15523225 - 15523371
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||  ||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||  ||||| |||| ||||||||||| ||     
T  15523225 tcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccg 15523324  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |||| |||||||||||||    ||| |||||||||||||||||||||||||    
T  15523325 caatgatttaaaccaata----agttagtattagagagagtgttcaaaaga 15523371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 54 - 204
Target Start/End: Original strand, 15531219 - 15531365
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||  ||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||  ||||| |||| ||||||||||| ||     
T  15531219 tcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccg 15531318  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |||| |||||||||||||    ||| |||||||||||||||||||||||||    
T  15531319 caatgatttaaaccaata----agttagtattagagagagtgttcaaaaga 15531365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 11987637 - 11987800
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||||||||||| | || | | |  || |||||||||||| || |||||| ||||||||| |||   |||||||||| ||||||||||    
T  11987637 acactcacttttcaacactctctccaacatttattcatttattggatgaaattaatgtatgttccaccacttagtgcgggttcaattttcaaagtgtaga 11987736  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||| |||||||||| ||||||||||  ||||||| |||||||| |||||| ||||||||    
T  11987737 cccacaatgatttaaaccattaagagagtggatattagaaagagtgtttaaaagagagtgttgc 11987800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 62 - 197
Target Start/End: Original strand, 29673498 - 29673633
Alignment:
Q  62 caacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatt 161  Q
    |||||||||||||| |||||| | ||| ||||||| |||||||  |||||||||||| ||||||||  ||||||||| |||||||||| | ||||| |||    
T  29673498 caacactctctctaacactcattattttattggataaaatcaatatatgtcccaccattttgtgtagtttcaattttcaaagtgtagaactacaattatt 29673597  T
Q  162 taaaccaataagagagtgagtattagagagagtgtt 197  Q
    ||||||||||| | ||||||||||||||||||||||    
T  29673598 taaaccaataaaaaagtgagtattagagagagtgtt 29673633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 211
Target Start/End: Original strand, 2225237 - 2225396
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| |||||||||||||  ||||||| |||| ||| ||||||||||||||| |||||||||||||||||||||  ||||  |||  ||||||||||    
T  2225237 acactcaattttcaacactct--ctagcacccactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcggtttacaaagtgtaga 2225334  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgtt 211  Q
    || ||| | |||||||||||||||| ||||||||| | | || |||||||||||| ||||||    
T  2225335 ccgacagtgatttaaaccaataagaaagtgagtatcacaaagcgtgttcaaaagagagtgtt 2225396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 211
Target Start/End: Original strand, 25543351 - 25543511
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||| ||||||||||||| |||| ||| ||| ||| |||||||||||  ||||||||||||||||||||| ||  | ||   || ||| ||     
T  25543351 acactcacttttaaacactctctctaacacttactcttttatttgatgaaatcaatatatgtcccaccactttgtgtaggtata-ttcccaatgtgcagc 25543449  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgtt 211  Q
    | |||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  25543450 ctcacaatgatttaaaccaataagatagtgagtattagagagagtgttcaaaagagagtgtt 25543511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 55 - 204
Target Start/End: Complemental strand, 41948310 - 41948161
Alignment:
Q  55 cacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccac 154  Q
    ||||||| |||||| | ||||  ||||||| ||| ||||||| ||||||| |||| | | ||||||||||||  |||||||||| |||||||| | ||||    
T  41948310 cactttttaacactatttctaatactcactcttttattggataaaatcaatgtatattctaccactttgtgttggttcaattttcaaagtgtaaatccac 41948211  T
Q  155 aataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    ||| ||||||| |||||||||||||||| |||||||||||||||||||||    
T  41948210 aatgatttaaatcaataagagagtgagtgttagagagagtgttcaaaaga 41948161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 27570240 - 27570399
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    |||||||| ||||||||||||  |||||| | ||| ||||| |||||| ||  |||||||||||| ||||||| |||| ||||||||||||||| |||||    
T  27570240 tcactttttaacactctctctgacactcattcttttattggttgaaattaagatatgtcccaccaatttgtgtgagtttaatttttaaagtgtaaaccca 27570339  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||| |||| ||| ||||||| ||||| | | ||||||||||||||||||| | ||||||    
T  27570340 caatgatttgaactaataagaaagtgaatttgagagagagtgttcaaaagagaatgttgc 27570399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 22540383 - 22540534
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||  ||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||  ||||| ||||  |||||||||| ||     
T  22540383 tcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccg 22540482  T
Q  154 caataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtg 209  Q
    |||| |||||||||||||    ||| ||||||| ||||||||||||||||| ||||    
T  22540483 caatgatttaaaccaata----agttagtattaaagagagtgttcaaaagagagtg 22540534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 51732289 - 51732450
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag 148  Q
    ||||||||||||||||| ||||||  | || ||||||||| ||| |||||||| || |||| | |||| ||||| ||| |||| |||||| ||||| ||     
T  51732289 gacactcacttttcaacgctctct--aacattcacttttttatttgatgaaattaatgtattttccactactttatgtgagtttaattttcaaagtataa 51732386  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||||||||||||||||||| ||||||||||||||||| |  |||||||| ||||||||||    
T  51732387 acccacaataatttaaaccaataaaagagtgagtattagagaaaacgttcaaaa-aaagtgttgc 51732450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 182
Target Start/End: Complemental strand, 3872802 - 3872671
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||||||||||||||||||||| ||  |||  || |||||||  |||||| |||||||||||||| |||||||||  ||||||||||    
T  3872802 acactcacttttcaacactctctctagcactcactcttctattaaat-aaatcaatatatgtcacaccactttgtgtaggttcaatttccaaagtgtaga 3872704  T
Q  150 cccacaataatttaaaccaataagagagtgagt 182  Q
    |||||||| ||| |||||||||| |||| ||||    
T  3872703 cccacaatgattcaaaccaataaaagagagagt 3872671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 197
Target Start/End: Original strand, 44271934 - 44272076
Alignment:
Q  55 cacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccac 154  Q
    ||||||| |||||||||| ||||||| ||| ||| |||| |||||||||| |||||| |||||| ||| |||| |||||||||| |||||||||| | ||    
T  44271934 cacttttaaacactctctttagcacttactattttattgaatgaaatcaatgtatgttccaccattttttgtaggttcaattttcaaagtgtagaacaac 44272033  T
Q  155 aataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    ||| ||||||| |||||| | | ||||||||||| ||||||||    
T  44272034 aatgatttaaatcaataaaaaaatgagtattagaaagagtgtt 44272076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 204
Target Start/End: Complemental strand, 37553110 - 37552966
Alignment:
Q  58 ttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaat 157  Q
    |||| |||||||||||||||||| ||||| | |||||||||||| || || ||||||| ||||||  ||  |||  ||||| |||||||||| |||||||    
T  37553110 ttttgaacactctctctagcacttactttcttattggatgaaattaatgtttgtcccatcacttttagtgggttttattttcaaagtgtagatccacaat 37553011  T
Q  158 aatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
     ||||||| |||||||||||||||||||  | |||||||||||||||    
T  37553010 gatttaaatcaataagagagtgagtatt--aaagagtgttcaaaaga 37552966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 63 - 212
Target Start/End: Original strand, 15928579 - 15928726
Alignment:
Q  63 aacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataattt 162  Q
    ||||||||||||||||| |||| ||| ||| |||| |||  | ||||||| ||||| ||||||| ||||| ||||| || ||||||||  ||| | ||||    
T  15928579 aacactctctctagcacccactcttttatttgatggaattcatgtatgtctcaccattttgtgtgagttctattttcaaggtgtagacttacagtgattt 15928678  T
Q  163 aaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    |||||||||| ||||||||||||  ||||||||||||||||| |||||||    
T  15928679 aaaccaataaaagagtgagtatt--agagagtgttcaaaagagagtgttg 15928726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 35336877 - 35337018
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||||||||||| || |||||||||||| | ||| |||||||||||||||    |||| |||||||||||||  ||||||||||   | ||||||    
T  35336877 acactcacttttcaaca-tc-ctctagcactcattattttattggatgaaatcaa----tgtctcaccactttgtgtgggttcaattttcttaatgtaga 35336970  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    | |||||| ||||||||||||||||||  |||||||||||||||||||    
T  35336971 cacacaatgatttaaaccaataagagaacgagtattagagagagtgtt 35337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 11135750 - 11135914
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-g 148  Q
    |||||| ||||| | |||||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||| |||  |||| ||||  |||||||| |    
T  11135750 acactctcttttgagcactctctctagcactcactattttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtagg 11135849  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     || ||| | |||| | ||||||| |||||||||  ||||||||||  |||||||| ||||||||    
T  11135850 tcctacattgatttcacccaataaaagagtgagtgctagagagagtcctcaaaagagagtgttgc 11135914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 931385 - 931548
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||||||||||| || ||||||  ||||||| ||| |||| ||| || ||| |||||||||| || ||| |||  |||||||||| ||| | || |    
T  931385 acactcacttttcaactctatctctaatactcactcttttattgaatggaagcaatgtatgtcccatcattttttgtgggttcaattttcaaaatataca 931484  T
Q  150 cccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaa-agtgttgc 213  Q
    |||||||| |||||||||||||| ||||||| ||||||| | |||||| ||||||| ||||||||    
T  931485 cccacaatgatttaaaccaataaaagagtgaatattagaaaaagtgtt-aaaagaagagtgttgc 931548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 32848752 - 32848588
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-g 148  Q
    |||||| ||||| |||||||||||||||||||||| ||| ||||| ||||||||  ||||||||||||||||| |||   ||| ||||| |||||||| |    
T  32848752 acactctcttttgaacactctctctagcactcactcttttattgggtgaaatcattgtatgtcccaccactttatgtggattccattttcaaagtgtagg 32848653  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     || ||| | | || ||||||||| ||||| |||  |||||| |||| |||||||| ||||||||    
T  32848652 tcctacattgaattcaaccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttgc 32848588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 194
Target Start/End: Original strand, 31866368 - 31866470
Alignment:
Q  91 ttggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagaga 190  Q
    |||||||||||||| ||||||||||| | ||| || | ||||||||||||||||||| | ||||||| |||||||| ||||||| ||||||||||| |||    
T  31866368 ttggatgaaatcaatgtatgtcccactattttttgaaggttcaatttttaaagtgta-atccacaatgatttaaactaataagaaagtgagtattaaaga 31866466  T
Q  191 gagt 194  Q
    ||||    
T  31866467 gagt 31866470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 14094163 - 14094006
Alignment:
Q  57 cttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccaca 155  Q
    ||||| ||||||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||| |||  |||| ||||  |||||||| | || |||    
T  14094163 cttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctaca 14094064  T
Q  156 ataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     | |||| |  |||| | | ||||||| ||| | ||||||||||||||| ||||||||    
T  14094063 ttgatttcactcaatcaaaaagtgagtgttacaaagagtgttcaaaagagagtgttgc 14094006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 204
Target Start/End: Original strand, 15468280 - 15468385
Alignment:
Q  99 aatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttc 198  Q
    |||||| ||||||| ||  |||||||||  |||||||||| | ||||||||||||||||||||||||  ||||| ||||| |||||| |||| |||||||    
T  15468280 aatcaatgtatgtctcattactttgtgtgggttcaattttcatagtgtagacccacaataatttaaattaataaaagagtaagtatttgagatagtgttc 15468379  T
Q  199 aaaaga 204  Q
    ||||||    
T  15468380 aaaaga 15468385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 18157048 - 18157121
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    ||||||| ||||||||||||||||||| ||| |||||||| |||||||||||| || |||||||||||||||||    
T  18157048 gacactctcttttcaacactctctctaacacccacttttttattggatgaaattaatgtatgtcccaccacttt 18157121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 213
Target Start/End: Complemental strand, 33060059 - 33059899
Alignment:
Q  52 actcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacc 151  Q
    ||||||||||| | ||  ||| || || ||||| ||| |||||||||||| |||| |||| |||||||| | |||  ||| ||||||||||||||| ||     
T  33060059 actcacttttctatacattctttaacagtcactcttttattggatgaaattaaagcatgt-ccaccactctctgtgggtttaatttttaaagtgtacact 33059961  T
Q  152 cacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||  |||||||||||||||||||| ||| |||| | ||||||||||||| ||| ||||    
T  33059960 cacaatgttttaaaccaataagagagtgggtactagaaaaagtgttcaaaagagagtattgc 33059899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 11430452 - 11430615
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-g 148  Q
    |||||| ||||| | |||||| ||||||||||||| ||| ||||| ||||||||| ||||||||||||||||| |||  |||| ||||  |||||||| |    
T  11430452 acactctcttttgagcactctttctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtagg 11430551  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     || ||| | | ||  |||||||| |||||||||  ||||||||||| |||||||| ||||||||    
T  11430552 tcctacattgaatt-caccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgc 11430615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 12767419 - 12767343
Alignment:
Q  128 agttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    ||||| ||||||||||||||||| || ||| |||||||||||||| |||||||||||||||||| || |||||||||    
T  12767419 agttctatttttaaagtgtagactcataatgatttaaaccaataaaagagtgagtattagagagggttttcaaaaga 12767343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 41095778 - 41095614
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||| ||||| | ||||||||||||||||||||  || ||||| ||||||||| |||||||||| |||| |||||  |||| ||||| |||||||||     
T  41095778 acactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccatcactctgtgtgggttccattttcaaagtgtagg 41095679  T
Q  150 ccc-acaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     || ||| | |||| | |||||||   |||||||  ||||||||||| |||||||| ||||||||    
T  41095678 tcctacattgatttcacccaataaataagtgagtgctagagagagtgctcaaaagagagtgttgc 41095614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 49730885 - 49730995
Alignment:
Q  60 ttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataa 159  Q
    ||||||||||||| || |||||||| ||| ||| ||| |||  ||  |||||| ||| |||||||||  |||||||||| |||||||||||||||||| |    
T  49730885 ttcaacactctctataacactcactcttttattagattaaactaatatatgtcacactactttgtgtgggttcaattttcaaagtgtagacccacaatga 49730984  T
Q  160 tttaaaccaat 170  Q
    |||||||||||    
T  49730985 tttaaaccaat 49730995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 213
Target Start/End: Complemental strand, 13114840 - 13114675
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta- 147  Q
    ||||||| |||||  |||||||||||| |||||||| ||| ||| ||| |||||||  |||||||||||||||| | |   ||| ||||  ||| ||||     
T  13114840 gacactctcttttggacactctctctaacactcactcttttattagataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtat 13114741  T
Q  148 gacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     ||||||| | |||||| ||||| ||| ||||||| ||||||||||||| ||||||| ||||||||    
T  13114740 aacccacattgatttaacccaatgagatagtgagtgttagagagagtgtccaaaagagagtgttgc 13114675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 33114038 - 33114135
Alignment:
Q  106 gtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaag 203  Q
    ||||||||||||| ||| |||| |||||||||| |||||||||| ||| ||| |||||||||||||| | |||||||  || |||||||||| |||||    
T  33114038 gtatgtcccaccattttatgtaggttcaattttcaaagtgtagatccagaatgatttaaaccaataaaaaagtgagtcctatagagagtgtttaaaag 33114135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 195
Target Start/End: Complemental strand, 45179367 - 45179270
Alignment:
Q  98 aaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtg 195  Q
    ||||||| |||||| ||| |||||||||   |||||||||| |||||||| ||||||||||| |||||  ||||||| | ||||||||||||||||||    
T  45179367 aaatcaatgtatgttccatcactttgtgagggttcaattttcaaagtgtaaacccacaataacttaaattaataagaaaatgagtattagagagagtg 45179270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 50425019 - 50424871
Alignment:
Q  66 actctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgta-gacccacaataatttaa 164  Q
    |||||||||| |||||||| ||| ||||||| |||||||   ||  ||||||||||| ||||||||| ||||  |||||||| |||||||| | ||||||    
T  50425019 actctctctaacactcactcttttattggataaaatcaatccataccccaccactttatgtaagttccatttccaaagtgtatgacccacattgatttaa 50424920  T
Q  165 accaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
     ||||||| | ||||| | ||||||||||||   |||||| ||||||||    
T  50424919 cccaataaaaaagtgaatgttagagagagtgcctaaaagagagtgttgc 50424871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 212
Target Start/End: Complemental strand, 39974266 - 39974207
Alignment:
Q  153 acaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    ||||| |||||||||||||||||||||||||||||| ||| ||||||||||| |||||||    
T  39974266 acaatgatttaaaccaataagagagtgagtattagaaagaatgttcaaaagagagtgttg 39974207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 172
Target Start/End: Original strand, 50539162 - 50539257
Alignment:
Q  77 cactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataa 172  Q
    |||||||| ||| |||||||||||||||||||||| |||||||||| |||  ||||||||||   ||||||||| | |||| |||||||| |||||    
T  50539162 cactcactcttttattggatgaaatcaaagtatgttccaccactttatgtgggttcaattttctcagtgtagacacgcaatgatttaaactaataa 50539257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 41918006 - 41918104
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag 148  Q
    |||||| ||||| | ||| |||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||| |||   ||| ||||| |||||||||    
T  41918006 acactctcttttgagcaccctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtggattccattttcaaagtgtag 41918104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 16948603 - 16948535
Alignment:
Q  145 gtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||| | ||||||| ||| ||||||||    
T  16948603 gtagatccacaatgatttaaatcaataagagagtgagtattagagaaaatgttcaacagagagtgttgc 16948535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 212
Target Start/End: Complemental strand, 1093223 - 1093076
Alignment:
Q  69 ctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaacca 168  Q
    |||| |||||| ||||  || ||| ||||||||||| |||||| |||||||||||| | ||||  ||||  |||||||||  ||||||| |||||||| |    
T  1093223 ctctttagcacgcactcgtttattagatgaaatcaatgtatgttccaccactttgtatgagttatatttccaaagtgtagttccacaatgatttaaacta 1093124  T
Q  169 ataag----agagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    |||||    | |||| |||||| ||||||||||||| ||| |||||||    
T  1093123 ataagatatatagtgggtattaaagagagtgttcaagagagagtgttg 1093076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 14341092 - 14341018
Alignment:
Q  48 tgacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    |||||||  ||||||||||||||||||| |||||| ||||| |||||||||||  ||  ||||||||||||||||    
T  14341092 tgacactttcttttcaacactctctctaacactcatttttttattggatgaaactaatatatgtcccaccacttt 14341018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 39039524 - 39039470
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaa 104  Q
    ||||||||||||||||||||| | ||||||||||| ||| |||||||||||||||    
T  39039524 acactcacttttcaacactctttttagcactcactcttttattggatgaaatcaa 39039470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 44739129 - 44739227
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag 148  Q
    |||||| ||||| |||||||||||||||||||||| |||  |||  |||||| || ||||||||||||||||| ||| ||||  ||||  |||||||||    
T  44739129 acactctcttttgaacactctctctagcactcactcttttcttgagtgaaattaatgtatgtcccaccactttatgtgagttgtatttccaaagtgtag 44739227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 171
Target Start/End: Original strand, 743430 - 743551
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||| |||| |||||||||| ||  | ||| || || ||||||||||||||| |||||| ||| ||||||||| ||||| |||||| ||| |  |||    
T  743430 acactcattttttaacactctctttaaaattcaattgtttattggatgaaatcaatgtatgttccatcactttgtggaagtttaattttcaaaatagaga 743529  T
Q  150 cccacaataatttaaaccaata 171  Q
    || ||||| |||||||| ||||    
T  743530 cctacaatgatttaaacaaata 743551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 204
Target Start/End: Original strand, 36566925 - 36567055
Alignment:
Q  68 tctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaacc 167  Q
    ||||| || |||| ||| ||| ||||||||||||||| ||||||| || |||||| | |  |||| ||||| |||||||||| ||| ||| |||          
T  36566925 tctctttaacacttactattttattggatgaaatcaatgtatgtctcatcactttatttgggttctattttcaaagtgtagatccagaattatt------ 36567018  T
Q  168 aataagagagtgagtattagagagagtgttcaaaaga 204  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  36567019 aataatagagtgagtattagagagtgtgttcaaaaga 36567055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 211
Target Start/End: Original strand, 28109894 - 28110040
Alignment:
Q  65 cactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga-cccacaataattta 163  Q
    |||| ||||||||||||||||||| ||||| ||||||||| | |||| |||||| ||| |||  |||| | ||| |||||||||| || | ||| ||||     
T  28109894 cactttctctagcactcacttttttattgggtgaaatcaatgcatgttccaccattttatgtgggttcca-tttcaaagtgtagatcctagaatgatttc 28109992  T
Q  164 aaccaataagagagtgagtattagagagagtgttcaaaagaaagtgtt 211  Q
    | ||||||| | ||||||||||||||| |||  | |||||| ||||||    
T  28109993 atccaataaaaaagtgagtattagagaaagtacttaaaagagagtgtt 28110040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 37525560 - 37525667
Alignment:
Q  70 tctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaa 169  Q
    |||||| || ||||| ||||||||||| ||| | | |||||| |||||| ||| |||  |||||||||| ||||| |||| | ||||| |||||||| ||    
T  37525560 tctctaacattcactctttcattggataaaacccatgtatgttccaccattttatgtgggttcaattttcaaagtctagatctacaatgatttaaactaa 37525659  T
Q  170 taagagag 177  Q
    ||||||||    
T  37525660 taagagag 37525667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 13388345 - 13388399
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaa 104  Q
    |||||| ||||| || |||||||||| |||||||||||| |||||||||||||||    
T  13388345 acactctcttttgaatactctctctaacactcacttttttattggatgaaatcaa 13388399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 21466680 - 21466630
Alignment:
Q  159 atttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtg 209  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||| ||||    
T  21466680 atttaaatcaataagaaagtgaatattagagagagtgttcaaaagagagtg 21466630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 180
Target Start/End: Original strand, 39499430 - 39499535
Alignment:
Q  74 tagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataag 173  Q
    ||||||||||| ||| ||| ||| ||||||| |||||||  | |||||| ||| ||||||||||| ||| |||||| ||||||| ||||||  |||||||    
T  39499430 tagcactcactcttt-attagataaaatcaatgtatgtcatatcactttttgtgagttcaattttcaaaatgtagatccacaatgatttaattcaataag 39499528  T
Q  174 agagtga 180  Q
    | |||||    
T  39499529 aaagtga 39499535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 4578744 - 4578674
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    |||||| ||||||||||||||||  | |||||||| ||| ||||| ||||||||| ||| |||||||||||||    
T  4578744 acactctcttttcaacactctct--aacactcactcttttattgggtgaaatcaatgtaggtcccaccacttt 4578674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 202
Target Start/End: Original strand, 28941840 - 28941985
Alignment:
Q  57 cttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaa 156  Q
    ||||| ||||||||||| |  ||||| ||||| |||||||||||| |  |||||||||||||  || |||  |||| |||||  |||| | || |||||     
T  28941840 cttttgaacactctctccaatactcatttttttattggatgaaattattgtatgtcccaccatattatgtgggttccattttctaagtatggatccacat 28941939  T
Q  157 taatttaaaccaataagagagtgagtattagagagagtgttcaaaa 202  Q
    | | ||||| |||||||||||||| | ||||| |||||||| ||||    
T  28941940 ttacttaaatcaataagagagtgaatgttagatagagtgtttaaaa 28941985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 39019700 - 39019741
Alignment:
Q  172 agagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  39019700 agagagtgagtattagagaaagtgttcaaaagagagtgttgc 39019741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 165
Target Start/End: Original strand, 46335108 - 46335223
Alignment:
Q  53 ctcacttttcaacactctctctagcactcac---tttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    ||||||||| |||||||| ||||||||||||   | ||| |||||||||||||||  ||| ||| ||||||||||   ||||  ||||| || || ||||    
T  46335108 ctcacttttgaacactctttctagcactcactcttcttttattggatgaaatcaatctatatcctaccactttgtcagagttatattttcaatgtataga 46335207  T
Q  150 cccacaataatttaaa 165  Q
    |||||||| |||||||    
T  46335208 cccacaatgatttaaa 46335223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 6325933 - 6325858
Alignment:
Q  98 aaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataaga 174  Q
    ||||||| ||||||||||||| ||||||| |||||  |||| |||||||| ||||||||| || |||||||| ||||    
T  6325933 aaatcaatgtatgtcccaccattttgtgtgagttc-tttttcaaagtgtaaacccacaatgatgtaaaccaacaaga 6325858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 28274841 - 28274797
Alignment:
Q  166 ccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||    
T  28274841 ccaataagagagtgagtgttagagagagtgttgaaaagagagtgt 28274797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 15661012 - 15661063
Alignment:
Q  159 atttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    |||||| ||||||| ||||||||| ||||||||||||| ||||||| |||||    
T  15661012 atttaacccaataatagagtgagtgttagagagagtgtccaaaagagagtgt 15661063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 204
Target Start/End: Original strand, 15906421 - 15906575
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtag 148  Q
    |||||||| |||| |||||| ||||||| ||| | | ||| |||| || ||||||| |||||||| | |||||||||| |  |||||||  ||| |||||    
T  15906421 gacactcaatttttaacactttctctagtacttaatattttattgcataaaatcaatgtatgtcc-atcactttgtgtgaactcaatttacaaaatgtag 15906519  T
Q  149 acccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaaga 204  Q
    |   ||||| ||||||| ||||||  || ||||||||||||| | |||| ||||||    
T  15906520 atttacaatgatttaaatcaataaacgaatgagtattagagataatgttaaaaaga 15906575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 28274796 - 28274847
Alignment:
Q  49 gacactcacttttcaacactctctctagcactcactttttcattggatgaaa 100  Q
    ||||||| ||||||||||||||||||| |||||||| | | |||||||||||    
T  28274796 gacactctcttttcaacactctctctaacactcactctcttattggatgaaa 28274847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 212
Target Start/End: Original strand, 32848695 - 32848754
Alignment:
Q  153 acaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    ||||| |||| | ||||||| |||||||||  |||||||||||||||||||| |||||||    
T  32848695 acaatgatttcacccaataaaagagtgagtgctagagagagtgttcaaaagagagtgttg 32848754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 26980387 - 26980433
Alignment:
Q  166 ccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    ||||||| |||||||||||||||||||||||| |||||  |||||||    
T  26980387 ccaataatagagtgagtattagagagagtgttgaaaagtgagtgttg 26980433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Original strand, 29673678 - 29673732
Alignment:
Q  143 gtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 197  Q
    ||||||| | ||||| |||||||||||||| | ||||| ||||||||||||||||    
T  29673678 gtgtagaactacaattatttaaaccaataaaaaagtgaatattagagagagtgtt 29673732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 41095617 - 41095671
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaa 104  Q
    |||||| ||||| | ||||||||||||||||||||| || ||||| |||||||||    
T  41095617 acactctcttttgagcactctctctagcactcacttatttattgggtgaaatcaa 41095671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 21466736 - 21466687
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatca 103  Q
    ||||||||  ||||||||| ||||||||||| ||| ||||||||||||||    
T  21466736 tcacttttgcacactctctttagcactcactattttattggatgaaatca 21466687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 21977205 - 21977270
Alignment:
Q  57 cttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    |||||||||||||||||||  ||||||||| | ||| |||||||  || ||||||||||| |||||    
T  21977205 cttttcaacactctctctaaaactcactttcttatttgatgaaactaatgtatgtcccactacttt 21977270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 24911493 - 24911546
Alignment:
Q  69 ctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    |||||||||||||| | ||| ||| ||||||||| | |||||||||||||||||    
T  24911493 ctctctagcactcattcttttattcgatgaaatccatgtatgtcccaccacttt 24911546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 187
Target Start/End: Original strand, 31074727 - 31074863
Alignment:
Q  50 acactcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtaga 149  Q
    |||||||  ||| ||||||||| ||| || | ||| ||| ||| |||||||||||   |||||| | |||||| |||   ||| ||||| ||| ||||||    
T  31074727 acactcatgtttgaacactctccctaacatttactcttttatttgatgaaatcaatacatgtcctaacactttatgttgattctattttcaaaatgtaga 31074826  T
Q  150 cccacaataatttaaaccaataagagagtgagtattag 187  Q
    |||||||| | ||| ||||||||||||||| |||||||    
T  31074827 cccacaatga-ttagaccaataagagagtgggtattag 31074863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 43851185 - 43851132
Alignment:
Q  69 ctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccacttt 122  Q
    |||||||| |||||||  || ||||| ||||||||| |||||||||||||||||    
T  43851185 ctctctagtactcactcatttattgggtgaaatcaatgtatgtcccaccacttt 43851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 47644396 - 47644331
Alignment:
Q  120 tttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 185  Q
    |||||||  |||| ||||| || ||||| ||||||||| ||||||| ||||||||||| |||||||    
T  47644396 tttgtgtgggttctattttcaatgtgtaaacccacaatgatttaaatcaataagagagcgagtatt 47644331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 18157159 - 18157211
Alignment:
Q  161 ttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    |||||||||||||  |||||||||| |||||| |||| |||||| ||||||||    
T  18157159 ttaaaccaataaggaagtgagtatttgagagaatgttgaaaagagagtgttgc 18157211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 24436608 - 24436540
Alignment:
Q  78 actcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgt 146  Q
    ||||||||||| ||  ||||||||||| |||| |||||||||||| |||  |||| ||||| |||||||    
T  24436608 actcacttttttatctgatgaaatcaatgtatatcccaccactttatgtgggttctattttcaaagtgt 24436540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 28941890 - 28941838
Alignment:
Q  153 acaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaa 205  Q
    |||||||||| | ||||||| | | |||||||| |||||||||||||||||||    
T  28941890 acaataatttcatccaataaaaaaatgagtattggagagagtgttcaaaagaa 28941838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 74 - 213
Target Start/End: Original strand, 27847 - 27986
Alignment:
Q  74 tagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataag 173  Q
    ||||||||||  ||| |||||||| |||||| |||||||||||||||||||||  |||| ||||  |||||||||||||||||| |||||||||||||||    
T  27847 tagcactcacgcttttattggatggaatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagacccacaatgatttaaaccaataag 27946  T
Q  174 agagtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||||||||| |||||||||||||||||  |||||||    
T  27947 agagtgagtattaaagagagtgttcaaaagagggtgttgc 27986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 9687 - 9801
Alignment:
Q  62 caacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatt 161  Q
    |||||||||||||| |||||||||||| ||||||||||||||| |||| |||||||| |||||||  |||||||||| ||||||||||| ||||||||||    
T  9687 caacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatt 9786  T
Q  162 taaaccaataagaga 176  Q
    ||||| |||||||||    
T  9787 taaacgaataagaga 9801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 11233 - 11347
Alignment:
Q  62 caacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatt 161  Q
    |||||||||||||| |||||||||||| ||||||||||||||| |||| |||||||| |||||||  |||||||||| ||||||||||| ||||||||||    
T  11233 caacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatt 11332  T
Q  162 taaaccaataagaga 176  Q
    ||||| |||||||||    
T  11333 taaacgaataagaga 11347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 77 - 213
Target Start/End: Complemental strand, 204850 - 204714
Alignment:
Q  77 cactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaaaccaataagaga 176  Q
    ||||||| |||| |||||||||||  ||| |||||| || ||||||||||  | |||||||||||| |||||||  ||||| || ||||||||||| |||    
T  204850 cactcacattttaattggatgaaagtaaattatgtctcatcactttgtgtctgatcaatttttaaattgtagacttacaattatataaaccaataaaaga 204751  T
Q  177 gtgagtattagagagagtgttcaaaagaaagtgttgc 213  Q
    ||||||| |||||||| ||||||||| | ||||||||    
T  204750 gtgagtactagagagaatgttcaaaaaagagtgttgc 204714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 202
Target Start/End: Complemental strand, 27016 - 26879
Alignment:
Q  65 cactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataatttaa 164  Q
    |||||||| || |||||||| | | ||||||  ||||||| |||||| ||||||||||||||  |||||||||| |||| ||||||||| |||  |||||    
T  27016 cactctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaa 26917  T
Q  165 accaataagagagtgagtattagagagagtgttcaaaa 202  Q
    |||||||| ||||||  | ||||||| |||| ||||||    
T  26916 accaataaaagagtggatgttagagaaagtgctcaaaa 26879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 165
Target Start/End: Original strand, 2237 - 2346
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||||| | ||||||||||||||||| ||| ||  ||||||||||| ||||||| ||| |||||||||  | |  ||||||||| |||||| |||    
T  2237 tcacttttcaatattctctctagcactcactcttttataagatgaaatcaatgtatgtcacactactttgtgt--ggtgcatttttaaaatgtagatcca 2334  T
Q  154 caataatttaaa 165  Q
    |||| |||||||    
T  2335 caatgatttaaa 2346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 165
Target Start/End: Original strand, 2268 - 2377
Alignment:
Q  54 tcacttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagaccca 153  Q
    ||||||||||| | ||||||||||||||||| ||| ||  ||||||||||| ||||||| ||| |||||||||  | |  ||||||||| |||||| |||    
T  2268 tcacttttcaatattctctctagcactcactcttttataagatgaaatcaatgtatgtcacactactttgtgt--ggtgcatttttaaaatgtagatcca 2365  T
Q  154 caataatttaaa 165  Q
    |||| |||||||    
T  2366 caatgatttaaa 2377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 296891 - 296847
Alignment:
Q  166 ccaataagagagtgagtattagagagagtgttcaaaagaaagtgt 210  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||    
T  296891 ccaataagagagtgagtgttagagagagtgttgaaaagaaagtgt 296847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 296854 - 296916
Alignment:
Q  57 cttttcaacactctctctagcactcactttttcattggatgaaatcaaagtatgtcccaccac 119  Q
    ||||||||||||||||||| |||||||| | | |||||||||||  |  ||||||||||||||    
T  296854 cttttcaacactctctctaacactcactctcttattggatgaaactagtgtatgtcccaccac 296916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 8489 - 8418
Alignment:
Q  141 aagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagaaagtgttg 212  Q
    |||||||||| || ||| |||||||||||||| ||| | ||||||| ||||||| ||||||||| |||||||    
T  8489 aagtgtagactcataatgatttaaaccaataaaagaattagtattaaagagagtattcaaaagagagtgttg 8418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 43068 - 42953
Alignment:
Q  78 actcactttttcattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaataattt-aaaccaataagaga 176  Q
    ||||||||||| |||| || |||||||  ||| | |||||| ||||||||||||||||||| ||||| || || || ||| |||| |||||||||| |||    
T  43068 actcacttttttattgaataaaatcaatatatctgccaccattttgtgtaagttcaattttaaaagtataaactcaaaatgatttaaaaccaataaaaga 42969  T
Q  177 gtgagtattagagaga 192  Q
    || | ||||| |||||    
T  42968 gttaatattaaagaga 42953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 201
Target Start/End: Complemental strand, 121255 - 121218
Alignment:
Q  164 aaccaataagagagtgagtattagagagagtgttcaaa 201  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  121255 aaccaataagagagtgagtattagagagatttttcaaa 121218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 27364 - 27420
Alignment:
Q  90 attggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgt 146  Q
    ||||| |||||||||  |||||||||||||||| |||| |||| ||||| |||||||    
T  27364 attgggtgaaatcaatatatgtcccaccactttatgtaggttccattttcaaagtgt 27420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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