View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17616_high_21 (Length: 249)

Name: NF17616_high_21
Description: NF17616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17616_high_21
NF17616_high_21
[»] chr3 (31 HSPs)
chr3 (61-249)||(45044804-45044993)
chr3 (1-62)||(34263702-34263763)
chr3 (1-65)||(9484593-9484657)
chr3 (1-65)||(29793376-29793440)
chr3 (1-63)||(42098625-42098687)
chr3 (1-62)||(38833963-38834024)
chr3 (1-62)||(49076424-49076485)
chr3 (1-65)||(29809342-29809406)
chr3 (1-60)||(14751040-14751099)
chr3 (3-62)||(16434857-16434916)
chr3 (1-63)||(901086-901148)
chr3 (1-63)||(44781981-44782043)
chr3 (1-62)||(12948040-12948101)
chr3 (1-62)||(29720395-29720456)
chr3 (3-59)||(1334295-1334351)
chr3 (1-64)||(34555149-34555212)
chr3 (3-62)||(46866343-46866402)
chr3 (12-65)||(2643278-2643331)
chr3 (1-62)||(29455706-29455767)
chr3 (1-62)||(48927800-48927861)
chr3 (1-62)||(50673677-50673738)
chr3 (1-57)||(34669613-34669669)
chr3 (3-63)||(53274995-53275055)
chr3 (12-65)||(1778358-1778411)
chr3 (1-62)||(28958997-28959058)
chr3 (3-62)||(32961246-32961305)
chr3 (12-62)||(18013479-18013529)
chr3 (1-63)||(33462704-33462766)
chr3 (12-57)||(38878487-38878532)
chr3 (3-64)||(52094094-52094155)
chr3 (5-61)||(53055627-53055683)
[»] chr7 (20 HSPs)
chr7 (1-62)||(37101029-37101090)
chr7 (1-65)||(36819613-36819677)
chr7 (1-64)||(38069049-38069112)
chr7 (1-62)||(16807149-16807210)
chr7 (1-62)||(35693833-35693894)
chr7 (1-62)||(9173339-9173400)
chr7 (1-62)||(30462224-30462285)
chr7 (10-64)||(19327328-19327382)
chr7 (4-62)||(35265823-35265881)
chr7 (1-55)||(40818700-40818754)
chr7 (7-64)||(3124155-3124212)
chr7 (1-62)||(39173835-39173896)
chr7 (1-64)||(32222548-32222611)
chr7 (1-64)||(32972330-32972393)
chr7 (1-56)||(38850708-38850763)
chr7 (7-62)||(40231928-40231983)
chr7 (1-63)||(28016115-28016176)
chr7 (12-65)||(9136676-9136729)
chr7 (1-62)||(41007959-41008020)
chr7 (1-46)||(47080624-47080669)
[»] chr5 (28 HSPs)
chr5 (1-62)||(33402594-33402655)
chr5 (1-56)||(30211744-30211799)
chr5 (1-62)||(1098175-1098236)
chr5 (1-55)||(8627142-8627196)
chr5 (1-63)||(20040418-20040480)
chr5 (1-62)||(1781148-1781209)
chr5 (1-62)||(40316818-40316879)
chr5 (1-62)||(41410662-41410723)
chr5 (3-62)||(19344704-19344763)
chr5 (12-62)||(1831351-1831401)
chr5 (7-65)||(9936897-9936955)
chr5 (1-62)||(14633007-14633068)
chr5 (1-62)||(31191180-31191241)
chr5 (1-62)||(41263132-41263193)
chr5 (1-63)||(10465298-10465360)
chr5 (1-63)||(13548212-13548274)
chr5 (1-59)||(14057711-14057769)
chr5 (1-55)||(34347474-34347528)
chr5 (1-62)||(20022860-20022921)
chr5 (1-62)||(20503051-20503112)
chr5 (1-62)||(30788205-30788266)
chr5 (7-59)||(14607566-14607618)
chr5 (3-63)||(30721690-30721750)
chr5 (11-62)||(39104292-39104344)
chr5 (12-62)||(39925203-39925253)
chr5 (3-64)||(2551632-2551693)
chr5 (1-62)||(27675540-27675601)
chr5 (1-62)||(32110675-32110736)
[»] chr1 (26 HSPs)
chr1 (1-62)||(8251156-8251217)
chr1 (1-64)||(45299316-45299379)
chr1 (1-66)||(1821635-1821700)
chr1 (1-62)||(5606398-5606459)
chr1 (1-62)||(6017456-6017517)
chr1 (1-62)||(10100520-10100581)
chr1 (3-62)||(52749281-52749340)
chr1 (1-63)||(10124108-10124170)
chr1 (1-47)||(36035701-36035747)
chr1 (1-62)||(2126652-2126713)
chr1 (1-62)||(7075337-7075398)
chr1 (1-62)||(44240519-44240580)
chr1 (7-62)||(12685911-12685966)
chr1 (1-60)||(44452197-44452256)
chr1 (3-65)||(8048757-8048819)
chr1 (12-62)||(28490160-28490210)
chr1 (1-62)||(33526169-33526230)
chr1 (12-64)||(47912279-47912331)
chr1 (1-56)||(26543874-26543929)
chr1 (1-56)||(40883417-40883472)
chr1 (12-62)||(5945765-5945815)
chr1 (12-62)||(31932196-31932246)
chr1 (1-62)||(29253479-29253540)
chr1 (1-62)||(41414203-41414264)
chr1 (1-62)||(41855728-41855789)
chr1 (1-62)||(50014568-50014629)
[»] chr8 (22 HSPs)
chr8 (1-65)||(23547065-23547129)
chr8 (1-63)||(761549-761611)
chr8 (1-63)||(30464431-30464493)
chr8 (1-63)||(43184779-43184841)
chr8 (1-62)||(4327119-4327180)
chr8 (1-62)||(28583303-28583364)
chr8 (3-66)||(8123651-8123714)
chr8 (7-62)||(23437819-23437874)
chr8 (1-63)||(38842161-38842224)
chr8 (1-63)||(3466282-3466344)
chr8 (1-62)||(20671256-20671317)
chr8 (1-62)||(44717296-44717357)
chr8 (3-62)||(5777556-5777615)
chr8 (1-64)||(14378686-14378749)
chr8 (1-62)||(30653360-30653421)
chr8 (3-62)||(44887717-44887776)
chr8 (1-63)||(11756775-11756837)
chr8 (12-62)||(44947018-44947067)
chr8 (1-62)||(7475385-7475446)
chr8 (1-62)||(14584207-14584268)
chr8 (1-62)||(37094132-37094193)
chr8 (1-62)||(40645609-40645670)
[»] chr6 (18 HSPs)
chr6 (1-65)||(24798553-24798617)
chr6 (1-65)||(24949532-24949596)
chr6 (1-62)||(29795451-29795512)
chr6 (1-62)||(30699261-30699322)
chr6 (1-62)||(2397770-2397831)
chr6 (1-62)||(2667332-2667393)
chr6 (1-62)||(17496325-17496386)
chr6 (1-62)||(28483037-28483099)
chr6 (12-65)||(995560-995613)
chr6 (1-62)||(2656677-2656738)
chr6 (1-62)||(16661609-16661670)
chr6 (1-62)||(32541484-32541545)
chr6 (1-64)||(9022838-9022901)
chr6 (12-62)||(31708893-31708943)
chr6 (1-57)||(13358514-13358570)
chr6 (3-55)||(32673755-32673807)
chr6 (1-64)||(4890133-4890196)
chr6 (1-62)||(10109418-10109478)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-62)||(5376-5437)
[»] chr4 (24 HSPs)
chr4 (1-62)||(10384848-10384909)
chr4 (1-65)||(46608210-46608274)
chr4 (1-64)||(31152659-31152722)
chr4 (3-62)||(55631879-55631938)
chr4 (1-62)||(37667776-37667837)
chr4 (1-62)||(40411611-40411672)
chr4 (1-65)||(31657358-31657422)
chr4 (3-57)||(39170963-39171017)
chr4 (1-63)||(48380472-48380534)
chr4 (1-62)||(3708253-3708314)
chr4 (1-62)||(39332832-39332893)
chr4 (1-62)||(43447165-43447226)
chr4 (1-65)||(33394074-33394138)
chr4 (1-56)||(1613220-1613275)
chr4 (1-60)||(48336430-48336489)
chr4 (1-63)||(8525418-8525480)
chr4 (1-63)||(37588533-37588595)
chr4 (36-68)||(39376909-39376941)
chr4 (1-64)||(6520433-6520496)
chr4 (11-62)||(44210149-44210200)
chr4 (12-62)||(28899084-28899134)
chr4 (12-62)||(28988407-28988457)
chr4 (1-62)||(29821050-29821111)
chr4 (7-64)||(42185272-42185329)
[»] chr2 (24 HSPs)
chr2 (1-61)||(16127782-16127842)
chr2 (1-60)||(7724613-7724672)
chr2 (1-63)||(12208988-12209050)
chr2 (2-62)||(45036363-45036423)
chr2 (1-60)||(31603418-31603477)
chr2 (1-62)||(8373434-8373495)
chr2 (3-64)||(10333582-10333643)
chr2 (7-62)||(4137410-4137465)
chr2 (12-63)||(20682653-20682704)
chr2 (3-62)||(40471736-40471795)
chr2 (1-63)||(16126084-16126146)
chr2 (1-63)||(16333479-16333541)
chr2 (3-65)||(18504469-18504531)
chr2 (1-67)||(38963790-38963856)
chr2 (1-62)||(8896271-8896332)
chr2 (1-62)||(41436832-41436893)
chr2 (1-62)||(41575562-41575623)
chr2 (3-63)||(5096247-5096307)
chr2 (11-63)||(25627037-25627089)
chr2 (12-62)||(37316876-37316926)
chr2 (1-62)||(2831707-2831768)
chr2 (2-62)||(6730106-6730166)
chr2 (1-65)||(16646243-16646307)
chr2 (3-63)||(26436687-26436747)
[»] scaffold0281 (1 HSPs)
scaffold0281 (1-62)||(13104-13165)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-62)||(183966-184027)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-60)||(23952-24011)
[»] scaffold0500 (1 HSPs)
scaffold0500 (3-62)||(680-739)
[»] scaffold0283 (1 HSPs)
scaffold0283 (12-62)||(2996-3045)
[»] scaffold1248 (1 HSPs)
scaffold1248 (1-62)||(1459-1520)
[»] scaffold0952 (1 HSPs)
scaffold0952 (1-62)||(793-854)


Alignment Details
Target: chr3 (Bit Score: 170; Significance: 2e-91; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 61 - 249
Target Start/End: Original strand, 45044804 - 45044993
Alignment:
Q  61 taatagatctttgaaagaagaaaa-aataataacaatttaaacttttttgttttggtttctttacgtgtactcttcttgccaaagaacacaaatcttcaa 159  Q
    |||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45044804 taataggtttttgaaagaagaaaacaataataacaatttaaacttttttgttttggtttctttacgtgtactcttcttgccaaagaacacaaatcttcaa 45044903  T
Q  160 aagaagcctactcaatgaaggtcttagtcgaaatccataaaaattttgttatggcggatgtacttgcaaaaatattgtaatgctaagttg 249  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45044904 aagaagcctactcgatgaaggtcttagtcgaaatccataaaaattttgttatggcggatgtacttgcaaaaatattgtaatgctaagttg 45044993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34263702 - 34263763
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  34263702 agtaagttaggtcaaaattgcacatttttaaacaggtcatttattgcgggacggagggagta 34263763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9484657 - 9484593
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    |||||||||| |||||||| |||||||| ||||||||||| ||||||||||||||||||||||||    
T  9484657 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagtaata 9484593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29793376 - 29793440
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    |||||||||| |||||||| |||||||| ||||||||||| ||||||||||||||||||||||||    
T  29793376 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagtaata 29793440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 42098625 - 42098687
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||| |||||||| |||||||| ||||||||||| ||||||||||||||||||||||    
T  42098625 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagtaa 42098687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38833963 - 38834024
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| ||||    
T  38833963 agtaagttaggtcaaaattacacatttttaaacaggtcatttattgcgggacagaggaagta 38834024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 49076424 - 49076485
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  49076424 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 49076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29809406 - 29809342
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    |||||| |||||||||||| || ||||| ||| ||||||||||||||||||||||||||||||||    
T  29809406 agtaagctagatcaaaattgcaaattttcaaataggtcatctattgcgggacggagggagtaata 29809342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14751040 - 14751099
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggag 60  Q
    |||||||||| |||||||| |||||||| |||||||||||||||||||||| ||||||||    
T  14751040 agtaagttaggtcaaaattgcacattttcaaacaggtcatctattgcgggagggagggag 14751099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 16434857 - 16434916
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  16434857 taagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 16434916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 901086 - 901148
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||| |||||||| |||||||| |||||| |||| ||||||||||||||||||||||    
T  901086 agtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggagggagtaa 901148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 44781981 - 44782043
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||| |||||||| || ||||| ||| ||||||||||||||||||||||||||||||    
T  44781981 agtaagttagttcaaaattgcaaattttcaaataggtcatctattgcgggacggagggagtaa 44782043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12948101 - 12948040
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| ||||| ||||| |||||||||||||||||||||    
T  12948101 agtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagta 12948040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29720456 - 29720395
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| |||||| |||| |||||||||||||||||||||    
T  29720456 agtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggagggagta 29720395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 1334295 - 1334351
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggaggga 59  Q
    |||||||||||||||||||||||||| |||  ||||||||||||||| |||||||||    
T  1334295 taagttagatcaaaattacacattttcaaatgggtcatctattgcggaacggaggga 1334351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34555212 - 34555149
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    |||||||||| |||||| | |||||||| ||||||||||  |||||||||||||||||||||||    
T  34555212 agtaagttaggtcaaaaatgcacattttcaaacaggtcacttattgcgggacggagggagtaat 34555149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 46866402 - 46866343
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| |||||||| |||||||| ||||| ||||| |||||||||||||||||||||    
T  46866402 taagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagta 46866343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 2643278 - 2643331
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    |||||||| || ||||| ||| ||||||||||||||||||||||||||||||||    
T  2643278 tcaaaattgcaaattttcaaataggtcatctattgcgggacggagggagtaata 2643331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29455706 - 29455767
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||| | ||||||||||||||    
T  29455706 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattacaggacggagggagta 29455767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48927800 - 48927861
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| | |||||| |||||||| |||||| |||| |||||||||||||||||||||    
T  48927800 agtaagttaggtaaaaattgcacattttcaaacagatcatttattgcgggacggagggagta 48927861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 50673738 - 50673677
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||  |||||||| |||||||| ||||||||||| |||||||| ||||||||||||    
T  50673738 agtaagttaagtcaaaattgcacattttcaaacaggtcatttattgcggaacggagggagta 50673677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34669669 - 34669613
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagg 57  Q
    |||||||||| |||||||| |||||||| ||||| ||||| ||||||||||||||||    
T  34669669 agtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagg 34669613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 53274995 - 53275055
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||| |||||||| |||||||| ||| ||||||| |||||||||||||| |||||||    
T  53274995 taagttaggtcaaaattgcacattttcaaataggtcatttattgcgggacggaaggagtaa 53275055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 1778411 - 1778358
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    |||||||| || ||||| ||| |||||||||||||||||||||||| |||||||    
T  1778411 tcaaaattgcaaattttcaaataggtcatctattgcgggacggaggaagtaata 1778358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28958997 - 28959058
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||| ||| |||||||| || ||||||||| || |||||||||||| |||||||||||||    
T  28958997 agtaagctaggtcaaaattgcaaatttttaaatagatcatctattgcgagacggagggagta 28959058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 32961305 - 32961246
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| |||||||| || |||||||||  ||||||||||||||||||| | ||||||    
T  32961305 taagttaggtcaaaattgcaaatttttaaatgggtcatctattgcgggacgaaaggagta 32961246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 18013479 - 18013529
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| |||||||| |||  ||||||||||| ||||||||||||||||    
T  18013479 tcaaaattgcacattttcaaatgggtcatctattacgggacggagggagta 18013529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 33462766 - 33462704
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||||||||||||  |||||||||||   || ||||||||| ||||||| |||||||    
T  33462766 agtaagttagatcaaaattgtacatttttaaatgagttatctattgcaggacggatggagtaa 33462704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 38878487 - 38878532
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagg 57  Q
    |||||||| |||||||| ||||||||||| |||| |||||||||||    
T  38878487 tcaaaattgcacattttcaaacaggtcatttattacgggacggagg 38878532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 52094094 - 52094155
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    ||||||||||||||||| || ||||| |||   |||||||||||||| ||||||| ||||||    
T  52094094 taagttagatcaaaattgcaaattttcaaatgagtcatctattgcggaacggaggaagtaat 52094155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 53055627 - 53055683
Alignment:
Q  5 agttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagt 61  Q
    |||||| ||||||||||||||||| |||  |||||| |||||  |||||||||||||    
T  53055627 agttaggtcaaaattacacattttcaaattggtcatttattgtaggacggagggagt 53055683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37101029 - 37101090
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  37101029 agtaagttaggtcaaaattacacattttcaaataggtcatctattgcgggacggagggagta 37101090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 36819677 - 36819613
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||||||| |||||||||||||||    
T  36819677 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcggaacggagggagtaata 36819613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38069112 - 38069049
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||||||| ||||||||||||||    
T  38069112 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcggaacggagggagtaat 38069049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16807149 - 16807210
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||| ||||||||||||||||    
T  16807149 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 16807210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35693833 - 35693894
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| ||||||||||| ||||||| |||||||||||||    
T  35693833 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgcgacggagggagta 35693894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9173339 - 9173400
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||||||| ||||||||  ||||||||||| ||| ||||||||||||    
T  9173339 agtaagttaggtcaaaattacacgtttttaaattggtcatctattccggaacggagggagta 9173400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30462224 - 30462285
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||  |||||||| |||||||| |||||| |||| |||||||||||||||||||||    
T  30462224 agtaagttaagtcaaaattgcacattttcaaacagatcatttattgcgggacggagggagta 30462285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 19327382 - 19327328
Alignment:
Q  10 gatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    |||||||||| || ||||||||| | ||||||||||||||||||||| |||||||    
T  19327382 gatcaaaattgcaaatttttaaatatgtcatctattgcgggacggagagagtaat 19327328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 35265823 - 35265881
Alignment:
Q  4 aagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||||| ||||||||  ||||||||||||| ||||| |||| ||||||||||||||||    
T  35265823 aagttaggtcaaaattgtacatttttaaacaagtcatttattacgggacggagggagta 35265881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40818700 - 40818754
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacgga 55  Q
    ||||||||||||||||||| |||||||| ||| || ||||||||| |||||||||    
T  40818700 agtaagttagatcaaaattgcacattttcaaatagatcatctattacgggacgga 40818754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 3124155 - 3124212
Alignment:
Q  7 ttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    |||||||||||||||||||||| |||   |||||||||||| |||||||| |||||||    
T  3124155 ttagatcaaaattacacattttcaaatgagtcatctattgcaggacggagagagtaat 3124212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39173896 - 39173835
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||| |||||||||||||||| |||||||||  ||||||||||||||| | ||| ||||||    
T  39173896 agtaaattagatcaaaattacatatttttaaatgggtcatctattgcggcatggatggagta 39173835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32222611 - 32222548
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    ||||| ||||||||||||| |||||||| | |  ||||||||||| ||| ||||||||||||||    
T  32222611 agtaaattagatcaaaattgcacattttgagatgggtcatctattacggaacggagggagtaat 32222548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 32972330 - 32972393
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    |||||| ||| ||||| || || ||||| ||| |||||||||||||||||| ||||||||||||    
T  32972330 agtaagctaggtcaaacttgcaaattttcaaataggtcatctattgcgggagggagggagtaat 32972393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 38850763 - 38850708
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggag 56  Q
    |||||||||| ||||||||||||||||| |||  |||||||||||| || ||||||    
T  38850763 agtaagttaggtcaaaattacacattttcaaatgggtcatctattgtggaacggag 38850708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 40231983 - 40231928
Alignment:
Q  7 ttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||| |||||||| |||||||| |||||||| || |||| ||||||||||||||||    
T  40231983 ttaggtcaaaattgcacattttcaaacaggttatttattacgggacggagggagta 40231928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 28016176 - 28016115
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    ||||||||||||||||||| |||||||| |||  ||||||| ||||| | |||||||||||||    
T  28016176 agtaagttagatcaaaattgcacattttcaaatgggtcatc-attgcagaacggagggagtaa 28016115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 9136676 - 9136729
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    ||||||||||||||| | |||  | ||||||||||||||| |||||||||||||    
T  9136676 tcaaaattacacattatcaaatggatcatctattgcgggatggagggagtaata 9136729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41007959 - 41008020
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| ||||||||||| |||||||||   ||||||||||| | || ||||||||||    
T  41007959 agtaagttaggtcaaaattacatatttttaaatgagtcatctattgtgagatggagggagta 41008020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 47080669 - 47080624
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattg 46  Q
    |||| |||||||||| | |||||||||||||| |||||||||||||    
T  47080669 agtatgttagatcaatagtacacatttttaaataggtcatctattg 47080624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33402594 - 33402655
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  33402594 agtaagttaggtcaaaattacacatttttaaacagatcatctattacgggacggagggagta 33402655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30211744 - 30211799
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggag 56  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  30211744 agtaagttagatcaaaattgcacatttttaaacaggtcatttattgcgggacggag 30211799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1098236 - 1098175
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  1098236 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 1098175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8627196 - 8627142
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacgga 55  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  8627196 agtaagttagatcaaaattgcacattttcaaataggtcatctattgcgggacgga 8627142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 20040418 - 20040480
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||| |||||||||||||||||    
T  20040418 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagtaa 20040480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1781148 - 1781209
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||| |||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  1781148 agtaacttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 1781209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40316879 - 40316818
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||| |||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  40316879 agtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 40316818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41410662 - 41410723
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||| |||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  41410662 agtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 41410723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 19344704 - 19344763
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| |||||||| |||||||| ||||||||||| |||||||||||||| ||||||    
T  19344704 taagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaaggagta 19344763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 1831401 - 1831351
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  1831401 tcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 1831351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 9936897 - 9936955
Alignment:
Q  7 ttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    ||||||||||||| |||||||||||| |  |||| ||||||||||||||||||||||||    
T  9936897 ttagatcaaaattgcacatttttaaatatatcatttattgcgggacggagggagtaata 9936955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14633068 - 14633007
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| |||||| |||| |||||| ||||||||||||||    
T  14633068 agtaagttaggtcaaaattgcacattttcaaacagatcatttattgcaggacggagggagta 14633007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31191180 - 31191241
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||| |||| |||||||| |||||||| ||||| ||||| |||||||||||||||||||||    
T  31191180 agtaaattaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagta 31191241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41263132 - 41263193
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| ||||||||||||||  |||| ||||| |||||||||||||||    
T  41263132 agtaagttaggtcaaaattgcacatttttaaacatatcatttattgagggacggagggagta 41263193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10465298 - 10465360
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||| ||| ||||||||| | ||||| ||| |||||||||||||||||| |||||||||||    
T  10465298 agtaagataggtcaaaattataaattttcaaataggtcatctattgcgggagggagggagtaa 10465360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 13548274 - 13548212
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||| |||||||| |||||||| ||||||||||  ||||  ||||||||||||||||    
T  13548274 agtaagttaggtcaaaattgcacattttcaaacaggtcacttattaagggacggagggagtaa 13548212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 14057769 - 14057711
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggaggga 59  Q
    |||||||||| |||||||| || ||||| |||||| |||| ||||||||||||||||||    
T  14057769 agtaagttaggtcaaaattgcatattttcaaacagatcatttattgcgggacggaggga 14057711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 34347528 - 34347474
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacgga 55  Q
    |||||||||  ||||||||||||||||| ||| |||||||||||||||| |||||    
T  34347528 agtaagttatgtcaaaattacacattttcaaataggtcatctattgcggaacgga 34347474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20022921 - 20022860
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| ||||||||||| ||||||| || ||||| ||||    
T  20022921 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgagaaggaggaagta 20022860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20503051 - 20503112
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||||||||||||||||  |  |||| ||| ||||||||||||||||    
T  20503051 agtaagttaggtcaaaattacacatttttaaatggaccatcaatttcgggacggagggagta 20503112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30788266 - 30788205
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||  ||||||||||||||||| |||  |||||| |||| ||||||||||||||||    
T  30788266 agtaagttatgtcaaaattacacattttcaaatgggtcatatattacgggacggagggagta 30788205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 14607566 - 14607618
Alignment:
Q  7 ttagatcaaaattacacatttttaaacaggtcatctattgcgggacggaggga 59  Q
    |||| |||||||| |||||||| ||||| ||||| ||||||||||||||||||    
T  14607566 ttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggaggga 14607618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 30721690 - 30721750
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||| |||||||| |||||||| ||| | ||||| |||||||||| |||||||||||    
T  30721690 taagttaggtcaaaattgcacattttcaaatatgtcatttattgcgggatggagggagtaa 30721750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 39104292 - 39104344
Alignment:
Q  11 atcaaaattacacatttttaaacaggt-catctattgcgggacggagggagta 62  Q
    |||||||||||||||||||||| |||| |||||||| |||||||||| |||||    
T  39104292 atcaaaattacacatttttaaataggtccatctattacgggacggagagagta 39104344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 39925253 - 39925203
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||||||||| ||||| |||  | ||||||||||||||||||||||||||    
T  39925253 tcaaaattacaaattttcaaatggatcatctattgcgggacggagggagta 39925203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 2551632 - 2551693
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    |||||||| |||||||| ||||||||||||  ||||||||||| | |||| |||| ||||||    
T  2551632 taagttaggtcaaaattgcacatttttaaatgggtcatctatttcaggactgaggaagtaat 2551693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27675601 - 27675540
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||| ||| |||||||| || ||||| ||| | ||||| |||||||||||||||||||||    
T  27675601 agtaagctaggtcaaaattgcaaattttcaaataagtcatttattgcgggacggagggagta 27675540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32110675 - 32110736
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||| ||||||||||||| |||||||| |||  | | ||||||||||| ||||||||||||    
T  32110675 agtaaattagatcaaaattgcacattttcaaatggattatctattgcggaacggagggagta 32110736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8251156 - 8251217
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  8251156 agtaagttagatcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 8251217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 45299379 - 45299316
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||||    
T  45299379 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagtaat 45299316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1821635 - 1821700
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaatag 66  Q
    |||||||||| |||||||| |||||||| ||| ||| |||||||||| ||||||||||||||||||    
T  1821635 agtaagttaggtcaaaattgcacattttcaaataggccatctattgccggacggagggagtaatag 1821700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5606398 - 5606459
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||||||||||||||||| ||| |||| ||| ||||||| |||||||||||||||||||||    
T  5606398 agtaagttagatcaaaattgcactttttcaaataggtcatttattgcgggacggagggagta 5606459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6017456 - 6017517
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||||||||||||||||| |||||||| |||||| |||| |||||||||||||||| ||||    
T  6017456 agtaagttagatcaaaattgcacattttcaaacagatcatttattgcgggacggaggaagta 6017517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10100520 - 10100581
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| ||||| ||||| |||||||||||||||||||||    
T  10100520 agtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagta 10100581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 52749340 - 52749281
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| | |||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  52749340 taagttaggtaaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 52749281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 10124170 - 10124108
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||||||||| ||| |||||||    
T  10124170 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggatggatggagtaa 10124108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36035747 - 36035701
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgc 47  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  36035747 agtaaattagatcaaaattacacatttttaaacaggtcatttattgc 36035701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2126713 - 2126652
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||| |||| ||||||||||||||||||||| | |||||||||||||| | ||||||||||    
T  2126713 agtaaattaggtcaaaattacacatttttaaataagtcatctattgcggaatggagggagta 2126652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7075337 - 7075398
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||||||||||||||||| ||| |||| ||||| ||||| |||||||||| ||||||||||    
T  7075337 agtaagttagatcaaaattgcacgttttcaaacaagtcatttattgcgggatggagggagta 7075398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44240580 - 44240519
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||| ||| |||||||| || ||||||||| ||||||| |||||||||||||||||||||    
T  44240580 agtaagctaggtcaaaattgcaaatttttaaataggtcatttattgcgggacggagggagta 44240519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 12685911 - 12685966
Alignment:
Q  7 ttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||||||||||| |||||||| |||| ||||||||||| ||||||| ||||||||    
T  12685911 ttagatcaaaattgcacattttcaaacgggtcatctattacgggacgaagggagta 12685966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 44452256 - 44452197
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggag 60  Q
    |||||||||| ||||||||||||||||| |||  || ||||||||||||||| |||||||    
T  44452256 agtaagttaggtcaaaattacacattttcaaatgggacatctattgcgggacagagggag 44452197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 8048757 - 8048819
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    |||| ||| |||||||| || ||||| ||| |||||||||||||| |||||||||||||||||    
T  8048757 taagctaggtcaaaattgcaaattttcaaataggtcatctattgcaggacggagggagtaata 8048819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 28490210 - 28490160
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| || ||||| ||| |||||||||||||||||||||||||||||    
T  28490210 tcaaaattgcaaattttcaaataggtcatctattgcgggacggagggagta 28490160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33526169 - 33526230
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||| ||||||||||||||||||||||||||    |||||||||||| |||||| ||||||    
T  33526169 agtaaattagatcaaaattacacatttttaaatgaatcatctattgcgagacggatggagta 33526230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 47912331 - 47912279
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    ||||||||||||||||||||| |||| ||||||||| ||| |||| |||||||    
T  47912331 tcaaaattacacatttttaaagaggtaatctattgcaggatggagagagtaat 47912279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26543929 - 26543874
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggag 56  Q
    |||||||||| ||||||||  ||||||| |||||| |||| |||||||||||||||    
T  26543929 agtaagttaggtcaaaattgtacattttcaaacagatcatttattgcgggacggag 26543874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40883472 - 40883417
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggag 56  Q
    |||||||||| |||||||| ||||||||||||  | ||||||||||||||| ||||    
T  40883472 agtaagttaggtcaaaatttcacatttttaaatggatcatctattgcgggatggag 40883417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 5945815 - 5945765
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| |||||||| ||||| ||||| ||||||||||||||| |||||    
T  5945815 tcaaaattgcacattttcaaacatgtcatttattgcgggacggagagagta 5945765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 31932196 - 31932246
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| || ||||| ||| || ||||||||||||||||||||||||||    
T  31932196 tcaaaattgcaaattttcaaatagatcatctattgcgggacggagggagta 31932246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29253540 - 29253479
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||| ||| |||||||| || ||||| ||| || ||||||||||||||||||| ||||||    
T  29253540 agtaagctaggtcaaaattgcaaattttcaaatagatcatctattgcgggacggatggagta 29253479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41414264 - 41414203
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||| ||| |||||||| || ||||| ||| |||| ||||||||| ||||||||||||||    
T  41414264 agtaagctaggtcaaaattgcaaattttcaaataggtaatctattgcaggacggagggagta 41414203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41855728 - 41855789
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||| ||| |||||||| || ||||| ||| ||||||| |||| ||||||||||||||||    
T  41855728 agtaagctaggtcaaaattgcaaattttcaaataggtcatttattacgggacggagggagta 41855789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 50014568 - 50014629
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||| |||||||||||| || ||||| ||| | |||||||||  ||||||||||||||||    
T  50014568 agtaagctagatcaaaattgcaaattttcaaataagtcatctatgacgggacggagggagta 50014629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23547129 - 23547065
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||||||||||    
T  23547129 agtaagttagatcaaaattacacaattttaaacaggtcatttattatgggacggagggagtaata 23547065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 761611 - 761549
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    ||||| |||| ||||||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  761611 agtaaattaggtcaaaattacacattttcaaacaggtcatttattgcgggacagagggagtaa 761549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30464493 - 30464431
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||| |||||||| |||||||| ||||| ||||| ||||||||||||||||||||||    
T  30464493 agtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagtaa 30464431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43184779 - 43184841
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||| ||||||| ||||||||||||||||||||| |||||| ||| |||||||||||    
T  43184779 agtaagttaggtcaaaataacacatttttaaacaggtcatttattgcaggatggagggagtaa 43184841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4327119 - 4327180
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||||||||||||||||| |||||||| ||||| ||||| |||||||||||| ||||||||    
T  4327119 agtaagttagatcaaaattgcacattttcaaacaagtcatttattgcgggacgcagggagta 4327180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28583303 - 28583364
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||| |||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  28583303 agtaaattaggtcaaaattgcacattttcaaaaaggtcatctattgcgggacggagggagta 28583364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 8123714 - 8123651
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaatag 66  Q
    |||||||| |||||||||||||||||||||  | ||||||||||| | ||||||||||||||||    
T  8123714 taagttaggtcaaaattacacatttttaaatggatcatctattgcagaacggagggagtaatag 8123651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 23437819 - 23437874
Alignment:
Q  7 ttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  23437819 ttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 23437874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38842224 - 38842161
Alignment:
Q  1 agtaagttagatcaaaattacacattttt-aaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||| ||||||||||| |||||    
T  38842224 agtaagttaggtcaaaattacacatttttcaaacaggtcatttattacgggacggaggaagtaa 38842161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3466344 - 3466282
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||| |||||||| | |||||| |||  |||||||||||||||||||||||||||||    
T  3466344 agtaagttaggtcaaaattgcgcattttcaaatgggtcatctattgcgggacggagggagtaa 3466282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20671317 - 20671256
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| ||||||||||||||||| |||  | |||||||||||| |||||||||||||    
T  20671317 agtaagttaggtcaaaattacacattttcaaattgatcatctattgcgcgacggagggagta 20671256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44717357 - 44717296
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| ||||||||||||||||| |||  | ||||| ||||||||||||||||||||    
T  44717357 agtaagttagttcaaaattacacattttcaaatggatcatccattgcgggacggagggagta 44717296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 5777556 - 5777615
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||| ||||||||||||||||||||| ||||||||||| |||||| ||| ||| ||||||    
T  5777556 taagatagatcaaaattacacattttcaaacaggtcatttattgcaggatggatggagta 5777615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 14378686 - 14378749
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    |||||||||| |||||||| |||||||| ||||   |||| |||||||||||||||||||||||    
T  14378686 agtaagttaggtcaaaattgcacattttcaaacctatcatttattgcgggacggagggagtaat 14378749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30653421 - 30653360
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||||| |||||| ||||||||||||  || |||||||| ||||||||| ||||||    
T  30653421 agtaagttagattaaaattgcacatttttaaattgggcatctattacgggacggatggagta 30653360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 44887717 - 44887776
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||| || |||||||| |||||||| ||| || |||| |||||||||||||||||||||    
T  44887717 taagtcaggtcaaaattgcacattttcaaatagatcatttattgcgggacggagggagta 44887776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11756837 - 11756775
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||| |||||||| || ||||| ||| | |||||||||||||| || ||||||||||    
T  11756837 agtaagttaggtcaaaattgcaaattttcaaataagtcatctattgcggaacagagggagtaa 11756775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 44947067 - 44947018
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| ||||||||||||  ||||||||||||| ||||||||||||||    
T  44947067 tcaaaattgcacatttttaaatgggtcatctattgc-ggacggagggagta 44947018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7475385 - 7475446
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||| ||||| |||||| || ||||||||| | |||||||||||||| || |||||||||    
T  7475385 agtaagctagattaaaattgcaaatttttaaatacgtcatctattgcggaactgagggagta 7475446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14584207 - 14584268
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||| ||||||||||||| | ||||| ||| || |||||||||  |||||||||||||||    
T  14584207 agtaagctagatcaaaattataaattttcaaatagatcatctattatgggacggagggagta 14584268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37094193 - 37094132
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||| ||| |||||||| || ||||| ||| ||||||| |||||||||||||||| ||||    
T  37094193 agtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacggaggaagta 37094132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40645670 - 40645609
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| ||||||||  | ||||| |||  || |||||||||||||||||||||||||    
T  40645670 agtaagttaggtcaaaattgaaaattttcaaatgggccatctattgcgggacggagggagta 40645609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24798553 - 24798617
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    |||||||||| |||||||| |||||||| ||||||||||| ||||||||||||||||||||||||    
T  24798553 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagtaata 24798617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24949596 - 24949532
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    ||||||||||||||||||| |||||||| |||  |||||||||||||||||||||||||||||||    
T  24949596 agtaagttagatcaaaattgcacattttcaaatgggtcatctattgcgggacggagggagtaata 24949532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29795512 - 29795451
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||||||||||||||||| |||||||| |||||| |||| |||||||||||||||||||||    
T  29795512 agtaagttagatcaaaattgcacattttcaaacagatcatttattgcgggacggagggagta 29795451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30699322 - 30699261
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  30699322 agtaagttaggtcaaaattacacatttttaaacagatcatttattgcggaacggagggagta 30699261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2397831 - 2397770
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||| |||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  2397831 agtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 2397770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2667332 - 2667393
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| |||||| |||| |||||||||||||||||||||    
T  2667332 agtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggagggagta 2667393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17496325 - 17496386
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| |||||| |||| |||||||||||||||||||||    
T  17496325 agtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggagggagta 17496386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28483099 - 28483037
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggac-ggagggagta 62  Q
    ||||||||||||||||||| |||||||| |||||| |||| ||||||||||| ||||||||||    
T  28483099 agtaagttagatcaaaattgcacattttcaaacagatcatttattgcgggacgggagggagta 28483037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 995613 - 995560
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    ||||||||||||||||| ||||| ||||| |||||| |||||||||||||||||    
T  995613 tcaaaattacacattttcaaacatgtcatttattgcaggacggagggagtaata 995560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2656677 - 2656738
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| |||||| |||| |||||||||||||| ||||||    
T  2656677 agtaagttaggtcaaaattgcacattttcaaacagctcatttattgcgggacggatggagta 2656738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16661609 - 16661670
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| ||||||||||||||||| |||  | |||||||||||||||| |||||||||    
T  16661609 agtaagttaggtcaaaattacacattttcaaatggatcatctattgcgggactgagggagta 16661670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32541484 - 32541545
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||| |||| |||||||| || ||||| ||||||||||| |||||||||||||||||||||    
T  32541484 agtaaattaggtcaaaattgcatattttcaaacaggtcatttattgcgggacggagggagta 32541545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9022901 - 9022838
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    |||| ||||| |||||||| || ||||| ||||||||||| |||||| ||||||||||||||||    
T  9022901 agtatgttaggtcaaaattgcatattttcaaacaggtcatttattgcaggacggagggagtaat 9022838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 31708943 - 31708893
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| |||||||||||| || ||||||||||| ||||||||||||||    
T  31708943 tcaaaattgcacatttttaaatagatcatctattgcaggacggagggagta 31708893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 13358570 - 13358514
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagg 57  Q
    |||||||||| ||||||||||||||||| ||| | ||||||||||| || |||||||    
T  13358570 agtaagttaggtcaaaattacacattttcaaataagtcatctattgtggaacggagg 13358514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 32673807 - 32673755
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacgga 55  Q
    ||||||||||||||||| || ||||||||| || ||||||||| |||||||||    
T  32673807 taagttagatcaaaattgcaaatttttaaatagatcatctattacgggacgga 32673755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4890133 - 4890196
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    ||||| |||| |||||||| ||||||||||||  | |||||||||||  |||||||||||||||    
T  4890133 agtaaattaggtcaaaattgcacatttttaaatggatcatctattgcatgacggagggagtaat 4890196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10109418 - 10109478
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| ||||||||||||  | ||||||||||| ||||||||| ||||    
T  10109418 agtaagttaggtcaaaattgcacatttttaaatggatcatctattgc-ggacggaggaagta 10109478  T

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Target: scaffold0221 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5437 - 5376
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  5437 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 5376  T

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Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10384909 - 10384848
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  10384909 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 10384848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 46608274 - 46608210
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||| |||||||    
T  46608274 agtaagttaggtcaaaatttcacattttcaaacaggtcatttattgcgggacggaggaagtaata 46608210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 31152722 - 31152659
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    |||||||||| |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||    
T  31152722 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgtgggacggagggagtaat 31152659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 55631879 - 55631938
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  55631879 taagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 55631938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37667776 - 37667837
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||| |||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  37667776 agtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagta 37667837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40411611 - 40411672
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||| ||||||||||||||||    
T  40411611 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagta 40411672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 31657358 - 31657422
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    |||||| ||| |||||||| || ||||||||| ||||||| ||||||||||||||||||||||||    
T  31657358 agtaagctaggtcaaaattgcaaatttttaaataggtcatttattgcgggacggagggagtaata 31657422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 39171017 - 39170963
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagg 57  Q
    |||||||| |||||||| |||||||| ||||||||||| ||||||||||||||||    
T  39171017 taagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 39170963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 48380534 - 48380472
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||| |||||| | |||||||| ||||||||||  ||||||||||||||||||||||    
T  48380534 agtaagttaggtcaaaaatgcacattttcaaacaggtcacttattgcgggacggagggagtaa 48380472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3708314 - 3708253
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| |||||| |||| ||||| |||||||||||||||    
T  3708314 agtaagttaggtcaaaattgcacattttcaaacagatcatttattgtgggacggagggagta 3708253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39332832 - 39332893
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| |||||| |||| ||||||| |||||||||||||    
T  39332832 agtaagttagttcaaaattgcacattttcaaacagatcatttattgcgtgacggagggagta 39332893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43447226 - 43447165
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| |||||| |||| |||| ||||||||||||||||    
T  43447226 agtaagttaggtcaaaattgcacattttcaaacagatcatttattacgggacggagggagta 43447165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33394138 - 33394074
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    |||||||||| |||||||| ||||||||||||  ||||| |||||| |||||||||| |||||||    
T  33394138 agtaagttaggtcaaaattgcacatttttaaatgggtcacctattgtgggacggaggaagtaata 33394074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1613220 - 1613275
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggag 56  Q
    ||||| |||| ||||||||||||||||| ||| |||||||||||| ||||||||||    
T  1613220 agtaaattaggtcaaaattacacattttcaaataggtcatctattacgggacggag 1613275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 48336430 - 48336489
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggag 60  Q
    |||||||||| |||||||| |||||||| |||   |||||||||||||||||||||||||    
T  48336430 agtaagttaggtcaaaattgcacattttcaaatgtgtcatctattgcgggacggagggag 48336489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8525418 - 8525480
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||| |||||||| || ||||| ||||||||||| ||||  ||||||||||||||||    
T  8525418 agtaagttaggtcaaaattgcatattttcaaacaggtcatttattatgggacggagggagtaa 8525480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37588533 - 37588595
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    ||||| ||| |||||||||| |||||||||||   |||||||||||| |||||||||||||||    
T  37588533 agtaacttaaatcaaaattaaacatttttaaatgtgtcatctattgccggacggagggagtaa 37588595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 39376909 - 39376941
Alignment:
Q  36 gtcatctattgcgggacggagggagtaatagat 68  Q
    |||||||||||||||||||||||||||||||||    
T  39376909 gtcatctattgcgggacggagggagtaatagat 39376941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6520496 - 6520433
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    |||||| ||| |||||||| || ||||| ||| ||||||| |||||||||||||| ||||||||    
T  6520496 agtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacggatggagtaat 6520433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 44210200 - 44210149
Alignment:
Q  11 atcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||||||| || | ||||||| ||||||| |||||||||||||||||||||    
T  44210200 atcaaaattgcaaaattttaaataggtcatttattgcgggacggagggagta 44210149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 28899084 - 28899134
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| || ||||| ||| ||||||||||||||||||| |||||||||    
T  28899084 tcaaaattgcaaattttcaaataggtcatctattgcgggacagagggagta 28899134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 28988407 - 28988457
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||| |||||| ||||| ||| ||||||||||||||||||| |||||||||    
T  28988407 tcaacattacaaattttcaaataggtcatctattgcgggactgagggagta 28988457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29821111 - 29821050
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||||||||||||||||| |||||||| |||  | ||||||||| ||||||| | ||||||    
T  29821111 agtaagttagatcaaaattgcacattttcaaatggatcatctattacgggacgaaaggagta 29821050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 42185329 - 42185272
Alignment:
Q  7 ttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    |||| |||||||| || ||||| |||  | ||||||||||||||||||||||||||||    
T  42185329 ttaggtcaaaattgcaaattttcaaatggatcatctattgcgggacggagggagtaat 42185272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16127782 - 16127842
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagt 61  Q
    |||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  16127782 agtaagttaggtcaaaattacacattttcaaataggtcatttattgcgggacggagggagt 16127842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7724613 - 7724672
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggag 60  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  7724613 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggag 7724672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 12209050 - 12208988
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||| |||||    
T  12209050 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggaagtaa 12208988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 45036423 - 45036363
Alignment:
Q  2 gtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||||||  |||||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  45036423 gtaagttaagtcaaaattacacatttttaaatgggtcatctattgcaggacggagggagta 45036363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31603418 - 31603477
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggag 60  Q
    |||||||||| |||||||| |||||||| ||||||||||| ||||| |||||||||||||    
T  31603418 agtaagttaggtcaaaattgcacattttcaaacaggtcatttattgtgggacggagggag 31603477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8373495 - 8373434
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| |||||| |||| ||||||||||| |||||||||    
T  8373495 agtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacagagggagta 8373434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 10333582 - 10333643
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaat 64  Q
    |||||||| ||||||||||||||||| |||||| |||| |||| || |||||||||||||||    
T  10333582 taagttaggtcaaaattacacattttcaaacagatcatttattacgagacggagggagtaat 10333643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 4137465 - 4137410
Alignment:
Q  7 ttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||||||  ||||||| ||||| ||||| |||||||||||||||||||||    
T  4137465 ttagatcaaaattgtacattttcaaacatgtcatttattgcgggacggagggagta 4137410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 20682704 - 20682653
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||| || ||||||||| |||||| |||||||||||||||||||||||    
T  20682704 tcaaaattgcaaatttttaaataggtcaactattgcgggacggagggagtaa 20682653  T

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Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 40471795 - 40471736
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||  |||||||| |||||||| |||||||| || |||||||||||||||||||||    
T  40471795 taagttaagtcaaaattgcacattttcaaacaggttatttattgcgggacggagggagta 40471736  T

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Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16126084 - 16126146
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||| |||||||| |||||||| |||  |||||| ||||||||||||||| ||||||    
T  16126084 agtaagttaggtcaaaattgcacattttcaaatgggtcatttattgcgggacggagagagtaa 16126146  T

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Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 16333541 - 16333479
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||| |||||||| |||||||| |||  |||||| ||||||||||||||| ||||||    
T  16333541 agtaagttaggtcaaaattgcacattttcaaatgggtcatttattgcgggacggagagagtaa 16333479  T

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Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 18504531 - 18504469
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    |||||||  ||||||||||||||||| ||| | |||||||||| ||||||||||| |||||||    
T  18504531 taagttacgtcaaaattacacattttcaaataagtcatctattacgggacggaggaagtaata 18504469  T

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Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 38963856 - 38963790
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaataga 67  Q
    |||||||||| |||||||| |||||||| ||||||||||  ||||  ||||| ||||||||||||||    
T  38963856 agtaagttaggtcaaaattgcacattttcaaacaggtcacttattaagggacagagggagtaataga 38963790  T

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Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8896332 - 8896271
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| |||  ||||||||||||||| | ||||||||||    
T  8896332 agtaagttaggtcaaaattgcacattttcaaatgggtcatctattgcggaatggagggagta 8896271  T

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Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41436893 - 41436832
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| ||||||||| ||||||| |||||  |||| |||| ||||||||||||||||    
T  41436893 agtaagttaggtcaaaattatacattttcaaacatttcatttattacgggacggagggagta 41436832  T

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Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41575623 - 41575562
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||| ||| |||||||| || ||||| ||| ||||||| |||||||||||||||||||||    
T  41575623 agtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacggagggagta 41575562  T

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Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 5096307 - 5096247
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||  ||||||||  ||||||| |||||||| || ||||||||||||||||||||||    
T  5096307 taagttatgtcaaaattgtacattttcaaacaggtaatttattgcgggacggagggagtaa 5096247  T

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Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 25627089 - 25627037
Alignment:
Q  11 atcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    |||||||||||||||||| |||  |||||||| |||||||| |||||||||||    
T  25627089 atcaaaattacacattttcaaatgggtcatctgttgcgggatggagggagtaa 25627037  T

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Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 37316926 - 37316876
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| || ||||| ||| |||||||| ||||||||||||||||||||    
T  37316926 tcaaaattgcaaattttcaaataggtcatcgattgcgggacggagggagta 37316876  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2831768 - 2831707
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||||||||||||||||  | |||| ||| |||| |||| |||||||    
T  2831768 agtaagttaggtcaaaattacacatttttaaatggatcatttatcgcggtacggtgggagta 2831707  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 6730106 - 6730166
Alignment:
Q  2 gtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    ||||| ||| |||||||| || ||||| ||  ||||||||||||||| |||||||||||||    
T  6730106 gtaagctaggtcaaaattgcaaattttcaagtaggtcatctattgcgagacggagggagta 6730166  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16646307 - 16646243
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaata 65  Q
    |||||| ||| ||||||||||| ||||||||| || |||| ||||| ||||| |||||| |||||    
T  16646307 agtaagctaggtcaaaattacaaatttttaaatagctcatttattgtgggactgagggaataata 16646243  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 26436687 - 26436747
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagtaa 63  Q
    ||||||||||||||| |||| |||||  ||  ||||||||| |||||||| ||||||||||    
T  26436687 taagttagatcaaaagtacatattttccaatgggtcatctaatgcgggactgagggagtaa 26436747  T

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Target: scaffold0281 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13165 - 13104
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||| ||| |||||||| || ||||||||||||||||| ||||| |||||||||||||||    
T  13165 agtaagctaggtcaaaattgcaaatttttaaacaggtcatttattgtgggacggagggagta 13104  T

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Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 184027 - 183966
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||| |||||||| |||||||| |||||||| || ||||||| |||||||||||||    
T  184027 agtaagttaggtcaaaattgcacattttcaaacaggttatttattgcgagacggagggagta 183966  T

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Target: scaffold0204 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 23952 - 24011
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggag 60  Q
    |||||||||| |||||||| |||||||| |||   |||||||||||||||||||||||||    
T  23952 agtaagttaggtcaaaattgcacattttcaaatgtgtcatctattgcgggacggagggag 24011  T

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Target: scaffold0500 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 680 - 739
Alignment:
Q  3 taagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| |||||||| || ||||| |||  |||||||||||||||| |||||||||||    
T  680 taagttaggtcaaaattgcatattttcaaatgggtcatctattgcggggcggagggagta 739  T

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Target: scaffold0283 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 3045 - 2996
Alignment:
Q  12 tcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||| ||||||||||||  ||||||||||||| ||||||||||||||    
T  3045 tcaaaattgcacatttttaaatgggtcatctattgc-ggacggagggagta 2996  T

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Target: scaffold1248 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1459 - 1520
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||  ||||||||||||||||||||| |  ||||||||| ||||| |||| |||||    
T  1459 agtaagttatgtcaaaattacacatttttaaataaatcatctattacgggatggagagagta 1520  T

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Target: scaffold0952 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 854 - 793
Alignment:
Q  1 agtaagttagatcaaaattacacatttttaaacaggtcatctattgcgggacggagggagta 62  Q
    |||||||||  ||||||||||||||||||||| |  ||||||||| ||||| |||| |||||    
T  854 agtaagttatgtcaaaattacacatttttaaataaatcatctattacgggatggagagagta 793  T

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