View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17616_high_3 (Length: 397)
Name: NF17616_high_3
Description: NF17616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17616_high_3 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 326; Significance: 0; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 16 - 382
Target Start/End: Complemental strand, 40820822 - 40820455
Alignment:
| Q |
16 |
acaagccgagaatcatagtgtgatgtttatggtatatgtgcagcatttgcaagctgtagtttaatgagctcgccaatatgtagctgttttcgaggatttg |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
40820822 |
acaagccgagaatcatagtgtgatgtttatggtatatgtgcagcatttgcaagctgtagtttattgagctcgccaatatgtagctgttttagaggatttg |
40820723 |
T |
|
| Q |
116 |
tacccagaaaca--gaagaatggagtatacataattggacgggtcggtgtgttacgaggacacctttggagtgtggaaggatcagcaataaaaccacgag |
213 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
40820722 |
tacccagaaacatagaagaatggagtatacataattggacgggtcggtgtgttaggaggacacctttggagtgtgaaaggatcagcaataaaaccacgag |
40820623 |
T |
|
| Q |
214 |
tacaaaggaaaatgggtttttgaaattgcatgcggttgaagtttcagattttgcagaaggtgtagcttgttacaccagacatatgcagaagcttatgttt |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | |
|
|
| T |
40820622 |
tacaaaggaaaatgggtttttgaaattgcatgcggttgaagtttcagaatttgcagaaggtgtagc-tgttacaccagacatatgcagaagcttatgtct |
40820524 |
T |
|
| Q |
314 |
gcacaattgctcctgcgttgcgtattctcatgattctgggattggctgtatgtcttggactgggaatct |
382 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40820523 |
gcacaattgctcctgcgttgcgtattctcatgattctgggattggctgtatgtcttggactgggaatct |
40820455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 34 - 382
Target Start/End: Complemental strand, 40825472 - 40825123
Alignment:
| Q |
34 |
tgtgatgtttatggtatatgtgcagcatttgcaagctgtagtttaatgagctcgccaatatgtagctgttttcgaggatttgtacccagaaacagaa--g |
131 |
Q |
| |
|
||||| |||||||||||||||| |||||| |||||||||||| | ||| | || ||||| || ||||| ||||||||| |||||| |||| | | |
|
|
| T |
40825472 |
tgtgacgtttatggtatatgtggggcattttcaagctgtagttcattgaagttaccgatatgcagttgtttgagaggatttgaacccaggaacaaacagg |
40825373 |
T |
|
| Q |
132 |
aatggagtatacataattggacgggtcggtgtgttacgaggacacctttggagtgtggaaggatcagcaataaaaccacgagtacaaaggaaaatgggtt |
231 |
Q |
| |
|
| |||| || ||| || ||||| ||| ||||||||| ||||||| |||| |||||| || | ||| ||||| || || |||||||||||| ||||||| |
|
|
| T |
40825372 |
agtggaatagacacaactggacaggtgggtgtgttagaaggacacttttgcagtgtgaaaaggtcaataataagacaacaagtacaaaggaagatgggtt |
40825273 |
T |
|
| Q |
232 |
tttgaaattgcatgcggttgaagtttcagattttgcagaaggtgtagcttgttacaccagacatatgcagaagcttatgtttgcacaattgctcctgcgt |
331 |
Q |
| |
|
|||||||||||| |||| ||||| | ||||||||| || || ||| ||||||||||||||||| | |||| ||| | | |||||||| ||| | |
|
|
| T |
40825272 |
tttgaaattgcagatggttaaagttcctgattttgcacaaagttcagc-agttacaccagacatatgtaaaagccaatgcatagagaattgctcttgcat |
40825174 |
T |
|
| Q |
332 |
tgcgtattctcatgattctgggattggctgtatgtcttggactgggaatct |
382 |
Q |
| |
|
||| |||||||| |||||||||| ||||||||||||||||| ||||| |
|
|
| T |
40825173 |
tgcatattctcacaccactgggattggttgtatgtcttggactggcaatct |
40825123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 16 - 382
Target Start/End: Original strand, 20293019 - 20293386
Alignment:
| Q |
16 |
acaagccgagaatcatagtgtgatgtttatggtatatgtgcagcatttgcaagctgtagtttaatgagctcgccaatatgtagctgttttcgaggatttg |
115 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||| || |||||||||||||||| | ||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
20293019 |
acaacccgagaatcagagtgtgatgtttatggtatatgtggggcctttgcaagctgtagttcattgagctcaccaatatgtagctgtttgagaggatttg |
20293118 |
T |
|
| Q |
116 |
tacccagaaaca--gaagaatggagtatacataattggacgggtcggtgtgttacgaggacacctttggagtgtggaaggatcagcaataaaaccacgag |
213 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||| ||| ||||||||| |||||||||||||||||||| |||| ||| |||||||||||| || |
|
|
| T |
20293119 |
tacccagaaacatagaagaatggagtaaacataattggaccggtgggtgtgttaggaggacacctttggagtgtgaaagggtcaacaataaaaccaccag |
20293218 |
T |
|
| Q |
214 |
tacaaaggaaaatgggtttttgaaattgcatgcggttgaagtttcagattttgcagaaggtgtagcttgttacaccagacatatgcagaagcttatgttt |
313 |
Q |
| |
|
|||||||||| ||||||||||||||||| | |||| ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
20293219 |
tacaaaggaagatgggtttttgaaattgaagatggttaaagttccagattttgcagaaggtgtagc-tgttacaccagaaatatgcagaagcttatgttt |
20293317 |
T |
|
| Q |
314 |
gcacaattgctcctgcgttgcgtattctcatgattctgggattggctgtatgtcttggactgggaatct |
382 |
Q |
| |
|
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
20293318 |
gcataattgctcctgcattgcgtattctcatgattctgggattggctgtatgtcttggactggaaatct |
20293386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 16 - 382
Target Start/End: Complemental strand, 20169726 - 20169359
Alignment:
| Q |
16 |
acaagccgagaatcatagtgtgatgtttatggtatatgtgcagcatttgcaagctgtagtttaatgagctcgccaatatgtagctgttttcgaggatttg |
115 |
Q |
| |
|
||||| || |||||| ||||||||||||| | |||||| ||||||||||| |||| || | ||||||| |||| |||||||||||| |||| |||| |
|
|
| T |
20169726 |
acaagtcgggaatcaaagtgtgatgtttacgacttatgtggggcatttgcaagttgtaattcattgagctcaccaacatgtagctgtttgagagggtttg |
20169627 |
T |
|
| Q |
116 |
tacccagaaaca--gaagaatggagtatacataattggacgggtcggtgtgttacgaggacacctttggagtgtggaaggatcagcaataaaaccacgag |
213 |
Q |
| |
|
||||||||||| ||| |||||| ||||||||| ||||| ||| |||||||| |||||||||||| |||||| |||| ||| |||||||||||| || |
|
|
| T |
20169626 |
aacccagaaacatagaacaatggaatatacataactggaccggtgggtgtgttcgaaggacacctttgcagtgtgaaagggtcaacaataaaaccacaag |
20169527 |
T |
|
| Q |
214 |
tacaaaggaaaatgggtttttgaaattgcatgcggttgaagtttcagattttgcagaaggtgtagcttgttacaccagacatatgcagaagcttatgttt |
313 |
Q |
| |
|
|||||||||| |||||||||||||| | || | || ||||| |||||||||| |||||| | | ||||||| ||||||||||||||||| |||| || |
|
|
| T |
20169526 |
tacaaaggaagatgggtttttgaaactacaaatgattaaagttccagattttgctgaaggt-ttgactgttacatcagacatatgcagaagcctatgctt |
20169428 |
T |
|
| Q |
314 |
gcacaattgctcctgcgttgcgtattctcatgattctgggattggctgtatgtcttggactgggaatct |
382 |
Q |
| |
|
| | |||||||| ||| |||| |||||||||||| ||||||||| |||||||||||||| || ||||| |
|
|
| T |
20169427 |
ggagaattgctcttgccttgcatattctcatgatgatgggattggttgtatgtcttggaccggcaatct |
20169359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 129 - 382
Target Start/End: Original strand, 20300263 - 20300515
Alignment:
| Q |
129 |
aagaatggagtatacataattggacgggtcggtgtgttacgaggacacctttggagtgtggaaggatcagcaataaaaccacgagtacaaaggaaaatgg |
228 |
Q |
| |
|
||||||||| || | | |||||||| ||| ||||||| | ||||||| |||| ||||| |||| ||| |||||||||||| |||||||||||| |||| |
|
|
| T |
20300263 |
aagaatggaatagaaacaattggactggtgggtgtgtcaggaggacagcttttcagtgttaaagggtcaacaataaaaccaccagtacaaaggaagatgg |
20300362 |
T |
|
| Q |
229 |
gtttttgaaattgcatgcggttgaagtttcagattttgcagaaggtgtagcttgttacaccagacatatgcagaagcttatgtttgcacaattgctcctg |
328 |
Q |
| |
|
||||||| |||||| |||| ||||| | || |||||||||||||||||| ||| ||||||||||||||||||||||||| ||| | |||||||| || |
|
|
| T |
20300363 |
atttttgatattgcagatggttaaagttcctgaatttgcagaaggtgtagct-gttgcaccagacatatgcagaagcttatgcttgtagaattgctcatg |
20300461 |
T |
|
| Q |
329 |
cgttgcgtattctcatgattctgggattggctgtatgtcttggactgggaatct |
382 |
Q |
| |
|
||||||| ||||||||||| |||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
20300462 |
cgttgcgaattctcatgatgctggaattggttgtatgtcttggactaggaatct |
20300515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 146 - 380
Target Start/End: Original strand, 20302353 - 20302586
Alignment:
| Q |
146 |
aattggacgggtcggtgtgttacgaggacacctttggagtgtggaaggatcagcaataaaaccacgagtacaaaggaaaatgggtttttgaaattgcatg |
245 |
Q |
| |
|
|||||||| || ||||||||| ||| | | ||||| |||||| |||| ||| |||||||||||| |||||||| ||| ||||||||||||||||||| |
|
|
| T |
20302353 |
aattggactagtgggtgtgttaggagaagatctttgcagtgtgaaagggtcaacaataaaaccacaagtacaaaagaagatgggtttttgaaattgcaga |
20302452 |
T |
|
| Q |
246 |
cggttgaagtttcagattttgcagaaggtgtagcttgttacaccagacatatgcagaagcttatgtttgcacaattgctcctgcgttgcgtattctcatg |
345 |
Q |
| |
|
|||| ||||| | |||||||||||||||||||| |||||||||||| ||||||||||||||||| ||| | |||||||| ||| ||| || || | | |
|
|
| T |
20302453 |
tggttaaagttcccgattttgcagaaggtgtagc-tgttacaccagatatatgcagaagcttatgcttggagaattgctcttgcactgcatactccaacg |
20302551 |
T |
|
| Q |
346 |
attctgggattggctgtatgtcttggactgggaat |
380 |
Q |
| |
|
|| ||||||||||||| |||||||||||||||||| |
|
|
| T |
20302552 |
atgctgggattggctgcatgtcttggactgggaat |
20302586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 16 - 365
Target Start/End: Original strand, 20272212 - 20272562
Alignment:
| Q |
16 |
acaagccgagaatcatagtgtgatgtttatggtatatgtgcagcatttgcaagctgtagtttaatgagctcgccaatatgtagctgttttcgaggatttg |
115 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||| |||||||||| |||||||| | || ||| |||||||| |||||| | |||||||| |
|
|
| T |
20272212 |
acaagccgagattcagagtgtgatgtttatggtatatgtggcgcatttgcaatctgtagttcatcgacctcaccaatatgcagctgtctgaaaggatttg |
20272311 |
T |
|
| Q |
116 |
tacccagaaacagaag--aatggagtatacataattggacgggtcggtgtgttacgaggacacctttggagtgtggaaggatcagcaataaaaccacgag |
213 |
Q |
| |
|
||| | ||| | | | |||||| ||| | || ||| | ||| ||||||||| || |||||||||| |||| | |||| || |||||||||||| || |
|
|
| T |
20272312 |
aacctaaaaatatacgtgaatggaaaataaacaactggtctggtgggtgtgttaggaagacacctttgcagtgcgaaagggtccacaataaaaccacaag |
20272411 |
T |
|
| Q |
214 |
tacaaaggaaaatgggtttttgaaattgcatgcggttgaagtttcagattttgcagaaggtgtagcttgttacaccagacatatgcagaagcttatgttt |
313 |
Q |
| |
|
|||||||||| ||||| |||||||| | || || || ||||| |||||||||| |||||| || | |||||||| ||||||||||||||| |||| || |
|
|
| T |
20272412 |
tacaaaggaagatgggattttgaaactacagacgattaaagttccagattttgctgaaggtttaa-tcgttacacctgacatatgcagaagcctatgctt |
20272510 |
T |
|
| Q |
314 |
gcacaattgctcctgcgttgcgtattctcatgattctgggattggctgtatg |
365 |
Q |
| |
|
| | |||||||| ||| |||| |||||||||||| |||||||||||||||| |
|
|
| T |
20272511 |
ggagaattgctcttgccttgcatattctcatgatgatgggattggctgtatg |
20272562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 203 - 361
Target Start/End: Complemental strand, 20090545 - 20090388
Alignment:
| Q |
203 |
aaaaccacgagtacaaaggaaaatgggtttttgaaattgcatgcggttgaagtttcagattttgcagaaggtgtagcttgttacaccagacatatgcaga |
302 |
Q |
| |
|
|||||||| | |||||||||| ||||||||||||||||| | |||| ||||| ||||||||||||||||||||||| ||| ||||||| |||||||| |
|
|
| T |
20090545 |
aaaaccacaaatacaaaggaagatgggtttttgaaattgaagatggttaaagttccagattttgcagaaggtgtagct-gttgcaccagaaatatgcagc |
20090447 |
T |
|
| Q |
303 |
agcttatgtttgcacaattgctcctgcgttgcgtattctcatgattctgggattggctg |
361 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| |
|
|
| T |
20090446 |
agcttatgtttgcataattgctcctgcgttgcgtattgtcacgacactgagattggctg |
20090388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 32 - 379
Target Start/End: Original strand, 20277972 - 20278320
Alignment:
| Q |
32 |
agtgtgatgtttatggtatatgtgcagcatttgcaagctgtagtttaatgagctcgccaatatgtagctgttttcgaggatttgtacccagaaacaga-- |
129 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||||||| | || ||| |||||||||| |||| | ||||||||| ||| ||||||| | |
|
|
| T |
20277972 |
agtgtgatgtttacggtatatgtggggcatttgcaagctgtagttcattgttctcaccaatatgtatctgtctgagaggatttgaacctagaaacataca |
20278071 |
T |
|
| Q |
130 |
agaatggagtatacataattggacgggtcggtgtgttacgaggacacctttggagtgtggaaggatcagcaataaaaccacgagtacaaaggaaaatggg |
229 |
Q |
| |
|
|||||||| | |||||| ||||| ||| ||||||||| ||| || ||||| ||||| | ||| | |||||||||||| | | ||||||| ||| | |
|
|
| T |
20278072 |
agaatggaatggacataactggaccggtgggtgtgttaggagaaccactttgcagtgtagtagggataacaataaaaccacacggagaaaggaagatgcg |
20278171 |
T |
|
| Q |
230 |
tttttgaaattgcatgcggttgaagtttcagattttgcagaaggtgtagcttgttacaccagacatatgcagaagcttatgtttgcacaattgctcctgc |
329 |
Q |
| |
|
||||||||||| || |||| |||| ||| |||||| |||| | ||||| |||||||||||||| ||||||||| |||| ||| | ||||| || ||| |
|
|
| T |
20278172 |
tttttgaaattacagacggtgaaagtaccagcttttgctgaagctttagct-gttacaccagacatttgcagaagcctatgcttggagaattgttcttgc |
20278270 |
T |
|
| Q |
330 |
gttgcgtattctcatgattctgggattggctgtatgtcttggactgggaa |
379 |
Q |
| |
|
|||| ||||| |||||||| | ||||||||||||||| ||||| ||||| |
|
|
| T |
20278271 |
cttgcatattcccatgattccgtgattggctgtatgtcgtggacagggaa |
20278320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 159 - 382
Target Start/End: Original strand, 20230205 - 20230427
Alignment:
| Q |
159 |
ggtgtgttacgaggacacctttggagtgtggaaggatcagcaataaaaccacgagtacaaaggaaaatgggtttttgaaattgcatgcggttgaagtttc |
258 |
Q |
| |
|
||||||||| | ||| ||| ||| ||||| ||||||| ||||||||||||| ||| ||||||| | |||||||||||| | || |||| ||||| | |
|
|
| T |
20230205 |
ggtgtgttaggcggaaaccattgcagtgtaaaaggatcggcaataaaaccacaggtagaaaggaagacgggtttttgaaactacagatggttaaagttcc |
20230304 |
T |
|
| Q |
259 |
agattttgcagaaggtgtagcttgttacaccagacatatgcagaagcttatgtttgcacaattgctcctgcgttgcgtattctcatgattctgggattgg |
358 |
Q |
| |
|
||||||||| |||||| ||| | ||||| |||| |||||||| |||||||||| | |||||||| || |||||||||||||||||| ||||||||| |
|
|
| T |
20230305 |
agattttgctgaaggtttagaaggg-acacctgacagatgcagaatcttatgtttggagaattgctcttgtgttgcgtattctcatgatgatgggattgg |
20230403 |
T |
|
| Q |
359 |
ctgtatgtcttggactgggaatct |
382 |
Q |
| |
|
||||||||||||||| || ||||| |
|
|
| T |
20230404 |
ctgtatgtcttggaccggcaatct |
20230427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 34 - 382
Target Start/End: Original strand, 20242028 - 20242377
Alignment:
| Q |
34 |
tgtgatgtttatggtatatgtgcagcatttgcaagctgtagtttaatgagctcgccaatatgtagctgttttcgaggatttgtacccagaaacagaag-- |
131 |
Q |
| |
|
||||||||||||||| |||||| || ||| ||||||||| || | ||||||| ||| | || || ||||| |||||||| ||||||||| | | |
|
|
| T |
20242028 |
tgtgatgtttatggtctatgtggagattttacaagctgtaattcattgagctcaccagtttgcagttgtttgaaaggatttgaacccagaaatactcgtg |
20242127 |
T |
|
| Q |
132 |
aatggagtatacataattggacgggtcggtgtgttacgaggacacctttggagtgtggaaggatcagcaataaaaccacgagtacaaaggaaaatgggtt |
231 |
Q |
| |
|
||||||||| | | || ||||| || ||||||||| | || ||||||| |||| |||| ||| |||||||||||| |||| ||||||| ||||||| |
|
|
| T |
20242128 |
aatggagtagaaacaactggactggcgggtgtgttaggcagagacctttgctgtgtaaaagggtcaccaataaaaccacaagtagaaaggaagatgggtt |
20242227 |
T |
|
| Q |
232 |
tttgaaattgcatgcggttgaagtttcagattttgcagaaggtgtagcttgttacaccagacatatgcagaagcttatgtttgcacaattgctcctgcgt |
331 |
Q |
| |
|
| ||||| | || |||| ||||| |||||||||| |||||| |||| |||||||| |||| |||||||| ||||||||| | |||||||| || || |
|
|
| T |
20242228 |
tctgaaactacagatggttaaagttccagattttgctgaaggtttagca-gttacacctgacacatgcagaatcttatgtttagagaattgctcttgtgt |
20242326 |
T |
|
| Q |
332 |
tgcgtattctcatgattctgggattggctgtatgtcttggactgggaatct |
382 |
Q |
| |
|
||||||||||||| || || ||||||||||||||||||||| || ||||| |
|
|
| T |
20242327 |
tgcgtattctcatcatgatgtgattggctgtatgtcttggaccggcaatct |
20242377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 41 - 382
Target Start/End: Original strand, 20287673 - 20288018
Alignment:
| Q |
41 |
tttatggtatatgtgcagcatttgcaagctgtagtttaatgagctcgccaatatgtagctgttttcgaggatttgtacccagaaacagaa--gaatggag |
138 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| | ||| | |||||||| || ||||| ||||||||| |||||| |||| | || |||| |
|
|
| T |
20287673 |
tttatggtatatgtggggcattcgcaagctgtagttcattgaagttaccaatatgcagttgtttgagaggatttgaacccaggaacaaacaggagtggaa |
20287772 |
T |
|
| Q |
139 |
tatacataattggacgggtcggtgtgttacgaggacacctttggagtgtggaaggatcagcaataaaaccacgagtacaaag---gaaaatgggtttttg |
235 |
Q |
| |
|
|| ||| || ||||| ||| ||||||||| |||| || |||| |||||| |||| ||| ||||| ||||| ||||||||| ||| |||| |||||| |
|
|
| T |
20287773 |
tagacacaactggactggtgggtgtgttagaaggatacttttgcagtgtgaaagggtcaataataacaccacaagtacaaagaaggaagatggatttttg |
20287872 |
T |
|
| Q |
236 |
aaattgcatgcggttgaagtttcagattttgcagaaggtgtagcttgttacaccagacatatgcagaagcttatgtttgcacaattgctcctgcgttgcg |
335 |
Q |
| |
|
|||||| | |||| ||||| | ||||||||| ||||| ||| |||||||||||||||| |||||| ||| || | |||||||| ||| |||| |
|
|
| T |
20287873 |
aaattgaagatggttaaagttcctgattttgcacaaggttcagcac-ttacaccagacatatgtagaagccgatgcttagagaattgctcttgcattgca |
20287971 |
T |
|
| Q |
336 |
tattctcatgattctgggattggctgtatgtcttggactgggaatct |
382 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
20287972 |
tattctcacaccgctgggattggttgtatgtcttggactgggaatct |
20288018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 379
Target Start/End: Original strand, 20282536 - 20282899
Alignment:
| Q |
18 |
aagccgagaatcatagtgtgatgtttatggtatatgtgcagcatttgcaagctgtagtttaatgagctcgccaatatgtagct--gttttcgaggatttg |
115 |
Q |
| |
|
||||| ||| ||| ||||||||| |||||||||||||| |||||||||||||||| || | || ||| |||||||||| || || | ||||||||| |
|
|
| T |
20282536 |
aagccaagactcagagtgtgatgcttatggtatatgtggggcatttgcaagctgtaattcattggtctcaccaatatgtatctctgtctgagaggatttg |
20282635 |
T |
|
| Q |
116 |
tacccagaaacaga--agaatggagtatacataattggacgggtcggtgtgttacgaggacacctttggagtgtgg-aaggatcagcaataaaaccacga |
212 |
Q |
| |
|
||| ||||||| | |||||||| ||||||||| ||||| ||| ||||||||| ||| || |||||| ||||||| |||| | | |||||||||||| |
|
|
| T |
20282636 |
aacctagaaacatacaagaatggaatatacataactggaccggtgggtgtgttaggagaacccctttgcagtgtggcaaggctaa-caataaaaccacac |
20282734 |
T |
|
| Q |
213 |
gtacaaaggaaaatgggtttttgaaattgcatgcggttgaagtttcagattttgcagaaggtgtagcttgttacaccagacatatgcagaagcttatgtt |
312 |
Q |
| |
|
| ||||||| ||| ||||| ||| | || ||| |||| | | |||||| |||| | ||||| |||||||||||||| ||||||||| |||| | |
|
|
| T |
20282735 |
agagaaaggaatatgc-tttttcaaactacagatggtgaaagtaccggcttttgctgaagctttagct-gttacaccagacatttgcagaagcctatgct |
20282832 |
T |
|
| Q |
313 |
tgcacaattgctcctgcgttgcgtattctcatgattctgggattggctgtatgtcttggactgggaa |
379 |
Q |
| |
|
|| | ||||| || ||| |||| ||||| |||||||| | ||||||||||||||| ||||| ||||| |
|
|
| T |
20282833 |
tggagaattgttcttgccttgcatattcccatgattccgtgattggctgtatgtcgtggacagggaa |
20282899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 373
Target Start/End: Original strand, 20262861 - 20262986
Alignment:
| Q |
247 |
ggttgaagtttcagattttgcagaaggtgtagcttgttacaccagacatatgcagaagcttatgtttgcacaattgctcctgcgttgcgtattctcatga |
346 |
Q |
| |
|
|||| ||||| |||||||||| |||||| |||| ||| |||| |||| ||||| || |||||||||| | |||||||| || ||||||||||||||| | |
|
|
| T |
20262861 |
ggttaaagttccagattttgctgaaggtttagca-gttgcacctgacaaatgcaaaatcttatgtttggagaattgctcttgtgttgcgtattctcatca |
20262959 |
T |
|
| Q |
347 |
ttctgggattggctgtatgtcttggac |
373 |
Q |
| |
|
| || ||||||||||||||||||||| |
|
|
| T |
20262960 |
tgatgtgattggctgtatgtcttggac |
20262986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 379
Target Start/End: Complemental strand, 20064002 - 20063836
Alignment:
| Q |
212 |
agtacaaaggaaaatgggtttttgaaattgcatgcggttgaagtttcagattttgcagaaggtgtagcttgttacaccagacatatgcagaagcttatgt |
311 |
Q |
| |
|
|||||||| ||| ||||||||||||||||| | |||| ||||| | ||||||||| || ||||| | ||||| |||||||||||||| ||||| |
|
|
| T |
20064002 |
agtacaaaagaagatgggtttttgaaattgaagatggttaaagttcctgattttgcaagtggaatagct-gagacaccggacatatgcagaaggttatgc |
20063904 |
T |
|
| Q |
312 |
ttgcacaattgctcctgcgttgcgtattctcatgattctgggattggctgtatgtcttggactgggaa |
379 |
Q |
| |
|
||| | |||||||| ||| |||||| ||| | ||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
20063903 |
ttggagaattgctcttgcactgcgtactctaacgatgctgggattggttgtatgacttggactgggaa |
20063836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 20064182 - 20064097
Alignment:
| Q |
19 |
agccgagaatcatagtgtgatgtttatggtatatgtgcagcatttgcaagctgtagtttaatgagctcgccaatatgtagctgttt |
104 |
Q |
| |
|
|||||| ||||| |||||||||| ||||||| ||||| ||||||||||||||||||| | ||| | | |||||||| |||||||| |
|
|
| T |
20064182 |
agccgaaaatcagagtgtgatgtatatggtacatgtggggcatttgcaagctgtagttcattgaacacaccaatatgcagctgttt |
20064097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 20230076 - 20230148
Alignment:
| Q |
32 |
agtgtgatgtttatggtatatgtgcagcatttgcaagctgtagtttaatgagctcgccaatatgtagctgttt |
104 |
Q |
| |
|
||||||||||||||||| |||||| |||||| ||||||||| || | ||||| ||||||| || |||||||| |
|
|
| T |
20230076 |
agtgtgatgtttatggtctatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgttt |
20230148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 207
Target Start/End: Original strand, 20262661 - 20262836
Alignment:
| Q |
34 |
tgtgatgtttatggtatatgtgcagcatttgcaagctgtagtttaatgagctcgccaatatgtagctgttttcgaggatttgtacccagaaacagaag-- |
131 |
Q |
| |
|
||||||||||||||| | |||| || |||| ||||||||| || | ||||||| || |||| || ||||| |||||||| ||||||||| | | |
|
|
| T |
20262661 |
tgtgatgtttatggtctctgtggagaatttacaagctgtaattcattgagctcaccggtatgcagttgtttgaaaggatttgaacccagaaatactcgtg |
20262760 |
T |
|
| Q |
132 |
aatggagtatacataattggacgggtcggtgtgttacgaggacacctttggagtgtggaaggatcagcaataaaac |
207 |
Q |
| |
|
||||||||| | | || ||||| || ||||||||| | ||| ||||||| |||||| |||||||||||||||||| |
|
|
| T |
20262761 |
aatggagtagaaacaactggactggcgggtgtgttaggcggagacctttgcagtgtgaaaggatcagcaataaaac |
20262836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 19937728 - 19937789
Alignment:
| Q |
318 |
aattgctcctgcgttgcgtattctcatgattctgggattggctgtatgtcttggactgggaa |
379 |
Q |
| |
|
|||||||| || ||||| |||||| ||||| ||| ||||| |||||||||||||||||||| |
|
|
| T |
19937728 |
aattgctcttgtgttgcatattcttatgatgctgacattggttgtatgtcttggactgggaa |
19937789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 19968867 - 19968928
Alignment:
| Q |
318 |
aattgctcctgcgttgcgtattctcatgattctgggattggctgtatgtcttggactgggaa |
379 |
Q |
| |
|
|||||||| || ||||| |||||| ||||| ||| ||||| |||||||||||||||||||| |
|
|
| T |
19968867 |
aattgctcttgtgttgcatattcttatgatgctgacattggttgtatgtcttggactgggaa |
19968928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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