View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17617_low_4 (Length: 509)

Name: NF17617_low_4
Description: NF17617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17617_low_4
NF17617_low_4
[»] chr3 (75 HSPs)
chr3 (1-495)||(50194407-50194903)
chr3 (311-495)||(29921833-29922018)
chr3 (311-495)||(29970986-29971171)
chr3 (302-489)||(47895923-47896111)
chr3 (299-489)||(36461560-36461751)
chr3 (311-475)||(629049-629214)
chr3 (301-489)||(33579639-33579827)
chr3 (305-483)||(35865070-35865247)
chr3 (311-489)||(53807995-53808170)
chr3 (298-495)||(21289945-21290140)
chr3 (302-480)||(45568582-45568761)
chr3 (299-488)||(10232839-10233029)
chr3 (303-482)||(54148764-54148941)
chr3 (305-489)||(21431400-21431584)
chr3 (304-480)||(47042190-47042367)
chr3 (299-495)||(8914473-8914669)
chr3 (304-489)||(31271936-31272122)
chr3 (302-480)||(40487097-40487274)
chr3 (338-489)||(35175205-35175358)
chr3 (299-489)||(48650863-48651055)
chr3 (302-479)||(51303780-51303955)
chr3 (308-495)||(22290716-22290903)
chr3 (380-495)||(42460596-42460710)
chr3 (391-495)||(53508082-53508186)
chr3 (299-488)||(9998235-9998426)
chr3 (299-489)||(43488719-43488917)
chr3 (299-489)||(6954825-6955016)
chr3 (317-468)||(7546397-7546550)
chr3 (299-488)||(10108007-10108195)
chr3 (305-483)||(52923252-52923429)
chr3 (311-452)||(38142352-38142493)
chr3 (346-483)||(4821623-4821757)
chr3 (330-489)||(4396466-4396615)
chr3 (301-451)||(32701269-32701420)
chr3 (306-495)||(16235196-16235383)
chr3 (299-488)||(10229243-10229435)
chr3 (299-483)||(40556480-40556665)
chr3 (376-489)||(9797658-9797773)
chr3 (430-489)||(12947410-12947469)
chr3 (299-489)||(9319832-9320016)
chr3 (301-470)||(23800057-23800230)
chr3 (305-470)||(43016630-43016796)
chr3 (390-489)||(52116140-52116239)
chr3 (377-470)||(7449050-7449144)
chr3 (377-470)||(7457192-7457286)
chr3 (391-489)||(37040632-37040728)
chr3 (299-489)||(12149913-12150102)
chr3 (302-489)||(20465099-20465283)
chr3 (311-478)||(21533949-21534116)
chr3 (340-483)||(20609025-20609176)
chr3 (390-495)||(36910764-36910870)
chr3 (306-395)||(14859273-14859362)
chr3 (440-489)||(44804934-44804983)
chr3 (334-489)||(29239143-29239297)
chr3 (311-470)||(29249024-29249183)
chr3 (411-479)||(51923611-51923678)
chr3 (311-414)||(38545616-38545719)
chr3 (376-462)||(25631646-25631730)
chr3 (428-489)||(20987928-20987989)
chr3 (299-344)||(20988030-20988075)
chr3 (403-464)||(32245438-32245499)
chr3 (312-355)||(9688498-9688541)
chr3 (303-465)||(40957007-40957168)
chr3 (302-451)||(953566-953724)
chr3 (387-483)||(3785710-3785806)
chr3 (376-461)||(26275951-26276036)
chr3 (430-469)||(1649320-1649359)
chr3 (305-344)||(1803243-1803282)
chr3 (391-478)||(24176241-24176328)
chr3 (302-459)||(25461159-25461317)
chr3 (430-488)||(3823436-3823494)
chr3 (299-340)||(36910934-36910975)
chr3 (378-488)||(38860249-38860361)
chr3 (434-466)||(2342419-2342451)
chr3 (430-458)||(7887569-7887597)
[»] scaffold0009 (1 HSPs)
scaffold0009 (311-495)||(58203-58387)
[»] chr4 (73 HSPs)
chr4 (301-489)||(22300636-22300824)
chr4 (311-489)||(47320531-47320709)
chr4 (302-489)||(51888346-51888533)
chr4 (311-488)||(54021662-54021840)
chr4 (302-479)||(36194505-36194681)
chr4 (311-489)||(2520578-2520757)
chr4 (298-489)||(22610972-22611163)
chr4 (311-488)||(9643178-9643359)
chr4 (299-489)||(26633800-26633990)
chr4 (298-489)||(4142884-4143075)
chr4 (312-495)||(22038923-22039105)
chr4 (299-479)||(27651737-27651916)
chr4 (299-470)||(18935576-18935746)
chr4 (391-495)||(52944193-52944293)
chr4 (299-489)||(35348095-35348284)
chr4 (302-489)||(19853641-19853828)
chr4 (306-489)||(21686370-21686553)
chr4 (302-480)||(9713693-9713878)
chr4 (311-489)||(33920853-33921031)
chr4 (310-475)||(36204525-36204689)
chr4 (303-489)||(13633907-13634095)
chr4 (312-459)||(22063940-22064087)
chr4 (312-488)||(22558594-22558772)
chr4 (299-489)||(53810817-53811008)
chr4 (311-495)||(42032648-42032835)
chr4 (310-482)||(26091050-26091222)
chr4 (302-470)||(24099218-24099388)
chr4 (308-465)||(28857180-28857334)
chr4 (300-489)||(45418319-45418506)
chr4 (330-489)||(18048711-18048860)
chr4 (376-495)||(36161580-36161694)
chr4 (376-480)||(32766380-32766485)
chr4 (305-464)||(9178152-9178312)
chr4 (321-479)||(43510010-43510169)
chr4 (302-483)||(5119130-5119313)
chr4 (318-489)||(9165175-9165344)
chr4 (430-489)||(47158148-47158207)
chr4 (396-480)||(9634560-9634645)
chr4 (311-489)||(10496143-10496318)
chr4 (299-386)||(1621718-1621805)
chr4 (376-475)||(56040787-56040889)
chr4 (377-450)||(21225344-21225417)
chr4 (366-470)||(7009122-7009225)
chr4 (377-470)||(10259043-10259136)
chr4 (421-478)||(31359893-31359950)
chr4 (392-468)||(2069729-2069804)
chr4 (429-489)||(29961054-29961114)
chr4 (312-480)||(53443928-53444094)
chr4 (410-488)||(1621629-1621707)
chr4 (381-452)||(21223447-21223518)
chr4 (377-452)||(21231603-21231678)
chr4 (322-455)||(35395839-35395965)
chr4 (305-458)||(48351344-48351495)
chr4 (434-479)||(37188694-37188739)
chr4 (400-488)||(43095518-43095608)
chr4 (434-479)||(52978749-52978794)
chr4 (428-480)||(4937750-4937802)
chr4 (299-407)||(48257661-48257769)
chr4 (299-343)||(51024737-51024781)
chr4 (392-483)||(8670358-8670448)
chr4 (409-483)||(44596563-44596638)
chr4 (375-432)||(13863163-13863221)
chr4 (308-362)||(31891524-31891578)
chr4 (421-455)||(37465425-37465459)
chr4 (434-479)||(8009461-8009506)
chr4 (433-478)||(38166373-38166418)
chr4 (311-359)||(9634482-9634529)
chr4 (315-347)||(21223714-21223746)
chr4 (315-347)||(21231832-21231864)
chr4 (315-347)||(21248481-21248513)
chr4 (315-347)||(21248640-21248672)
chr4 (416-483)||(40066190-40066258)
chr4 (434-466)||(43444335-43444367)
[»] chr2 (69 HSPs)
chr2 (302-495)||(12648048-12648241)
chr2 (298-475)||(29574777-29574952)
chr2 (299-495)||(43397244-43397439)
chr2 (319-495)||(24461238-24461412)
chr2 (311-495)||(32448746-32448929)
chr2 (302-479)||(14955305-14955482)
chr2 (299-479)||(10237354-10237532)
chr2 (305-495)||(3308724-3308913)
chr2 (299-483)||(11985366-11985550)
chr2 (303-489)||(4098886-4099073)
chr2 (299-489)||(4778532-4778723)
chr2 (317-489)||(18763265-18763436)
chr2 (299-489)||(7448027-7448217)
chr2 (305-489)||(31788241-31788426)
chr2 (302-483)||(7646254-7646437)
chr2 (331-478)||(37994086-37994232)
chr2 (311-488)||(8809073-8809250)
chr2 (376-489)||(19062482-19062595)
chr2 (299-490)||(27097535-27097725)
chr2 (310-488)||(9169388-9169566)
chr2 (299-489)||(29279700-29279890)
chr2 (301-475)||(19597660-19597833)
chr2 (314-488)||(5427998-5428173)
chr2 (303-475)||(36943267-36943440)
chr2 (311-479)||(28718090-28718254)
chr2 (376-469)||(1415421-1415514)
chr2 (376-489)||(4041724-4041837)
chr2 (390-495)||(36691745-36691849)
chr2 (299-470)||(17994864-17995036)
chr2 (376-489)||(38445023-38445136)
chr2 (312-450)||(41694407-41694545)
chr2 (366-489)||(30400167-30400292)
chr2 (313-495)||(6359001-6359189)
chr2 (311-489)||(29173849-29174028)
chr2 (314-495)||(6436402-6436583)
chr2 (316-461)||(7678029-7678181)
chr2 (311-468)||(1421462-1421624)
chr2 (311-475)||(37416493-37416657)
chr2 (376-466)||(11833340-11833431)
chr2 (299-475)||(35220110-35220282)
chr2 (366-483)||(37876733-37876851)
chr2 (428-489)||(4904275-4904336)
chr2 (299-424)||(12677491-12677616)
chr2 (335-468)||(18107888-18108020)
chr2 (430-482)||(19596013-19596065)
chr2 (428-488)||(31128910-31128970)
chr2 (376-462)||(30420555-30420639)
chr2 (311-432)||(17149958-17150079)
chr2 (401-495)||(23933747-23933839)
chr2 (421-480)||(33923603-33923662)
chr2 (421-495)||(14423224-14423297)
chr2 (428-470)||(28227834-28227876)
chr2 (420-478)||(42714639-42714697)
chr2 (376-465)||(4192717-4192804)
chr2 (430-483)||(16261274-16261327)
chr2 (307-344)||(42698950-42698987)
chr2 (374-450)||(14423147-14423223)
chr2 (304-460)||(19029066-19029221)
chr2 (299-347)||(23933863-23933911)
chr2 (376-462)||(8971745-8971831)
chr2 (376-462)||(3725059-3725143)
chr2 (380-489)||(4264333-4264442)
chr2 (430-488)||(28871893-28871951)
chr2 (311-360)||(4904395-4904444)
chr2 (311-344)||(31129023-31129056)
chr2 (434-483)||(34598922-34598971)
chr2 (440-492)||(11812627-11812679)
chr2 (394-462)||(27249270-27249336)
chr2 (402-462)||(42949618-42949677)
[»] chr8 (51 HSPs)
chr8 (302-495)||(8980971-8981154)
chr8 (299-489)||(1239531-1239722)
chr8 (312-489)||(15344090-15344267)
chr8 (312-489)||(15433155-15433332)
chr8 (312-489)||(15524459-15524636)
chr8 (310-480)||(24099399-24099567)
chr8 (306-495)||(18890828-18891015)
chr8 (299-445)||(1236865-1237012)
chr8 (302-475)||(31013712-31013886)
chr8 (313-489)||(7883368-7883544)
chr8 (319-483)||(37971086-37971248)
chr8 (301-488)||(27110592-27110780)
chr8 (311-470)||(28897494-28897654)
chr8 (303-495)||(41896285-41896477)
chr8 (338-495)||(3240185-3240344)
chr8 (366-489)||(20553373-20553496)
chr8 (306-489)||(29617584-29617768)
chr8 (376-482)||(20559880-20559985)
chr8 (376-482)||(20571442-20571547)
chr8 (306-480)||(45445948-45446122)
chr8 (314-488)||(23230430-23230605)
chr8 (311-460)||(25191223-25191372)
chr8 (306-454)||(8867607-8867755)
chr8 (391-489)||(40619200-40619298)
chr8 (318-489)||(3673236-3673403)
chr8 (374-468)||(14545050-14545146)
chr8 (311-481)||(17693749-17693919)
chr8 (394-495)||(14585565-14585666)
chr8 (302-489)||(40211432-40211621)
chr8 (376-489)||(8443649-8443762)
chr8 (376-470)||(29937963-29938057)
chr8 (374-475)||(26469338-26469436)
chr8 (390-489)||(6831453-6831551)
chr8 (302-451)||(10377471-10377620)
chr8 (434-492)||(21237702-21237760)
chr8 (318-475)||(33214773-33214930)
chr8 (353-495)||(8826033-8826176)
chr8 (429-472)||(43834144-43834187)
chr8 (304-362)||(39655287-39655345)
chr8 (376-470)||(5046598-5046692)
chr8 (428-483)||(24186792-24186847)
chr8 (376-455)||(43890251-43890328)
chr8 (376-470)||(7677427-7677521)
chr8 (423-480)||(27498500-27498557)
chr8 (429-489)||(36948565-36948625)
chr8 (376-462)||(9619477-9619561)
chr8 (430-464)||(20227438-20227472)
chr8 (311-344)||(1608251-1608284)
chr8 (306-395)||(8412571-8412660)
chr8 (311-344)||(18537639-18537672)
chr8 (308-344)||(41060498-41060534)
[»] chr5 (45 HSPs)
chr5 (299-489)||(8985062-8985257)
chr5 (299-489)||(38597566-38597756)
chr5 (302-495)||(39567067-39567259)
chr5 (331-495)||(10332675-10332840)
chr5 (299-489)||(13006997-13007188)
chr5 (299-483)||(7035996-7036181)
chr5 (339-495)||(2979437-2979592)
chr5 (302-489)||(11977066-11977254)
chr5 (306-470)||(14211009-14211170)
chr5 (304-495)||(28541037-28541221)
chr5 (299-489)||(6012267-6012458)
chr5 (299-489)||(9113854-9114045)
chr5 (305-482)||(15571260-15571438)
chr5 (313-488)||(34945204-34945380)
chr5 (372-488)||(8096628-8096743)
chr5 (316-480)||(38007143-38007306)
chr5 (317-482)||(26878215-26878380)
chr5 (353-489)||(8088342-8088477)
chr5 (299-488)||(26825197-26825389)
chr5 (299-495)||(24229908-24230107)
chr5 (299-449)||(41630279-41630421)
chr5 (376-489)||(6216740-6216858)
chr5 (403-495)||(19103598-19103689)
chr5 (366-470)||(31391904-31392010)
chr5 (376-478)||(10722618-10722722)
chr5 (311-489)||(13421724-13421901)
chr5 (302-495)||(41749091-41749287)
chr5 (304-489)||(25979931-25980117)
chr5 (311-475)||(7929979-7930140)
chr5 (391-482)||(11074036-11074128)
chr5 (421-467)||(4771031-4771077)
chr5 (306-468)||(14664152-14664306)
chr5 (429-495)||(14726585-14726651)
chr5 (394-462)||(2057957-2058023)
chr5 (300-344)||(14726743-14726787)
chr5 (430-482)||(19349602-19349654)
chr5 (421-480)||(28386830-28386888)
chr5 (376-462)||(30371601-30371685)
chr5 (421-492)||(31314648-31314721)
chr5 (421-492)||(31364396-31364469)
chr5 (421-489)||(1409389-1409460)
chr5 (421-470)||(14082518-14082567)
chr5 (421-462)||(41214776-41214817)
chr5 (394-462)||(10649348-10649414)
chr5 (434-466)||(16981223-16981255)
[»] chr1 (56 HSPs)
chr1 (311-489)||(49626694-49626872)
chr1 (302-483)||(12634942-12635123)
chr1 (305-481)||(32679237-32679413)
chr1 (299-489)||(44543044-44543233)
chr1 (305-495)||(47132693-47132868)
chr1 (298-480)||(34878410-34878592)
chr1 (299-489)||(7337792-7337983)
chr1 (304-495)||(16161609-16161799)
chr1 (296-482)||(15435009-15435195)
chr1 (299-495)||(1742053-1742249)
chr1 (314-489)||(18939109-18939283)
chr1 (380-495)||(23291766-23291881)
chr1 (366-489)||(32394838-32394961)
chr1 (311-460)||(34528503-34528650)
chr1 (314-488)||(29738766-29738941)
chr1 (308-462)||(34413247-34413402)
chr1 (311-478)||(45415343-45415511)
chr1 (320-488)||(11462577-11462747)
chr1 (301-483)||(51916787-51916970)
chr1 (302-489)||(10776590-10776777)
chr1 (339-495)||(9341536-9341692)
chr1 (342-490)||(15492109-15492254)
chr1 (334-479)||(48749997-48750140)
chr1 (312-488)||(5983621-5983799)
chr1 (311-488)||(27456324-27456503)
chr1 (390-482)||(31918852-31918945)
chr1 (302-470)||(31983955-31984124)
chr1 (299-489)||(35484520-35484698)
chr1 (299-480)||(45789337-45789517)
chr1 (299-489)||(35462166-35462358)
chr1 (307-465)||(44915425-44915585)
chr1 (311-476)||(940149-940314)
chr1 (391-495)||(13075760-13075863)
chr1 (311-489)||(19060686-19060864)
chr1 (302-489)||(21947747-21947934)
chr1 (421-495)||(37720245-37720318)
chr1 (311-489)||(14872423-14872603)
chr1 (308-480)||(21686654-21686825)
chr1 (403-495)||(36775841-36775931)
chr1 (377-465)||(50377177-50377264)
chr1 (394-489)||(13144941-13145036)
chr1 (376-495)||(15836042-15836160)
chr1 (380-489)||(8212039-8212149)
chr1 (299-466)||(568936-569103)
chr1 (392-483)||(26535260-26535351)
chr1 (308-362)||(24012911-24012965)
chr1 (322-483)||(36894377-36894535)
chr1 (304-482)||(27580263-27580441)
chr1 (380-489)||(34479346-34479454)
chr1 (326-438)||(7836947-7837059)
chr1 (391-489)||(34329579-34329677)
chr1 (352-465)||(31692618-31692730)
chr1 (430-468)||(40163650-40163688)
chr1 (434-483)||(30818443-30818492)
chr1 (302-342)||(6218104-6218144)
chr1 (422-458)||(50625227-50625263)
[»] chr6 (44 HSPs)
chr6 (299-495)||(30493304-30493495)
chr6 (299-489)||(33053297-33053488)
chr6 (299-489)||(12170265-12170456)
chr6 (302-489)||(3913703-3913890)
chr6 (302-470)||(1523181-1523347)
chr6 (305-495)||(32191855-32192045)
chr6 (380-495)||(30776517-30776631)
chr6 (299-489)||(68130-68320)
chr6 (319-465)||(30894427-30894573)
chr6 (299-495)||(14801589-14801786)
chr6 (352-480)||(28981002-28981128)
chr6 (378-489)||(34018409-34018521)
chr6 (311-483)||(605986-606159)
chr6 (310-495)||(8102498-8102685)
chr6 (308-475)||(32059688-32059854)
chr6 (299-495)||(545796-545989)
chr6 (312-488)||(7515331-7515509)
chr6 (312-448)||(4010672-4010807)
chr6 (379-482)||(23128468-23128572)
chr6 (387-489)||(34222654-34222755)
chr6 (351-489)||(1933827-1933966)
chr6 (390-482)||(22571351-22571442)
chr6 (299-480)||(14800976-14801158)
chr6 (377-470)||(30608662-30608754)
chr6 (391-489)||(127536-127631)
chr6 (311-395)||(27097834-27097918)
chr6 (429-483)||(11321604-11321658)
chr6 (307-470)||(24227859-24228024)
chr6 (421-483)||(26588603-26588665)
chr6 (403-464)||(31225967-31226026)
chr6 (391-474)||(31296671-31296755)
chr6 (421-489)||(32327346-32327414)
chr6 (419-478)||(678995-679054)
chr6 (302-476)||(29255584-29255759)
chr6 (376-462)||(7876164-7876248)
chr6 (376-462)||(33109708-33109792)
chr6 (444-489)||(7976311-7976355)
chr6 (299-344)||(9721785-9721830)
chr6 (374-468)||(528502-528598)
chr6 (376-443)||(29320037-29320105)
chr6 (376-462)||(33740697-33740781)
chr6 (330-407)||(7976377-7976453)
chr6 (394-462)||(8496857-8496923)
chr6 (304-412)||(32328790-32328898)
[»] scaffold0445 (1 HSPs)
scaffold0445 (305-495)||(1119-1309)
[»] chr7 (52 HSPs)
chr7 (306-489)||(30756948-30757132)
chr7 (299-495)||(24350968-24351163)
chr7 (311-481)||(19404892-19405062)
chr7 (319-495)||(37837582-37837758)
chr7 (306-495)||(22742716-22742904)
chr7 (310-492)||(5078522-5078702)
chr7 (299-489)||(13797061-13797251)
chr7 (302-495)||(25067860-25068049)
chr7 (304-455)||(8013628-8013780)
chr7 (334-479)||(35132757-35132901)
chr7 (312-488)||(12141437-12141615)
chr7 (311-489)||(34899736-34899912)
chr7 (302-489)||(9450266-9450454)
chr7 (302-495)||(41554251-41554440)
chr7 (303-495)||(41553561-41553749)
chr7 (303-495)||(41553906-41554094)
chr7 (311-489)||(47590097-47590273)
chr7 (334-479)||(1749284-1749426)
chr7 (310-495)||(28476005-28476187)
chr7 (311-495)||(11343577-11343766)
chr7 (312-488)||(48061206-48061384)
chr7 (299-480)||(39328931-39329113)
chr7 (299-446)||(19296649-19296797)
chr7 (304-489)||(40992958-40993144)
chr7 (302-468)||(4529853-4530020)
chr7 (311-483)||(42978391-42978565)
chr7 (317-489)||(48316941-48317114)
chr7 (303-495)||(39171714-39171908)
chr7 (331-468)||(24770058-24770195)
chr7 (377-489)||(45349932-45350044)
chr7 (391-483)||(35665267-35665360)
chr7 (376-467)||(25255086-25255176)
chr7 (391-470)||(26610893-26610971)
chr7 (409-476)||(48930661-48930728)
chr7 (306-480)||(25287325-25287494)
chr7 (311-478)||(3394256-3394422)
chr7 (416-483)||(46699933-46700000)
chr7 (311-488)||(3224549-3224725)
chr7 (376-495)||(11653728-11653846)
chr7 (318-483)||(38051203-38051367)
chr7 (306-460)||(5348747-5348896)
chr7 (420-495)||(24069521-24069596)
chr7 (390-476)||(5775074-5775162)
chr7 (311-407)||(49149043-49149138)
chr7 (377-480)||(38798636-38798739)
chr7 (434-480)||(21266322-21266368)
chr7 (299-340)||(24350695-24350737)
chr7 (430-464)||(44311951-44311985)
chr7 (376-462)||(46821888-46821972)
chr7 (311-344)||(45350467-45350500)
chr7 (421-466)||(49148244-49148289)
chr7 (438-466)||(286692-286720)
[»] scaffold0127 (1 HSPs)
scaffold0127 (294-489)||(15256-15451)
[»] scaffold0888 (1 HSPs)
scaffold0888 (305-479)||(1815-1988)
[»] scaffold0088 (1 HSPs)
scaffold0088 (299-495)||(50555-50751)
[»] scaffold0017 (1 HSPs)
scaffold0017 (299-495)||(32871-33068)
[»] scaffold0884 (1 HSPs)
scaffold0884 (312-488)||(2102-2279)
[»] scaffold0026 (1 HSPs)
scaffold0026 (299-489)||(71993-72184)
[»] scaffold0603 (1 HSPs)
scaffold0603 (312-494)||(7500-7680)
[»] scaffold0064 (1 HSPs)
scaffold0064 (306-470)||(19190-19348)
[»] scaffold0039 (1 HSPs)
scaffold0039 (376-479)||(92946-93049)
[»] scaffold0219 (1 HSPs)
scaffold0219 (299-480)||(14976-15158)
[»] scaffold0049 (1 HSPs)
scaffold0049 (368-468)||(71435-71533)
[»] scaffold0634 (1 HSPs)
scaffold0634 (299-489)||(8283-8472)
[»] scaffold0492 (1 HSPs)
scaffold0492 (376-495)||(12762-12880)
[»] scaffold0262 (1 HSPs)
scaffold0262 (390-488)||(1948-2047)
[»] scaffold0136 (2 HSPs)
scaffold0136 (416-489)||(37933-38006)
scaffold0136 (429-488)||(10171-10230)
[»] scaffold0121 (1 HSPs)
scaffold0121 (366-483)||(31405-31524)
[»] scaffold0347 (1 HSPs)
scaffold0347 (411-465)||(5894-5948)
[»] scaffold0087 (1 HSPs)
scaffold0087 (294-344)||(25604-25654)
[»] scaffold0554 (1 HSPs)
scaffold0554 (376-468)||(10725-10815)


Alignment Details
Target: chr3 (Bit Score: 408; Significance: 0; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 1 - 495
Target Start/End: Complemental strand, 50194903 - 50194407
Alignment:
Q  1 actaaatagtattcctaatttctactcatcaaccaaataaaatgtnnnnnnnnnn--ccaaataaagtataaagaaaatagagattaagttgtttttctc 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||| ||||||||||||||||||||    
T  50194903 actaaatagtattcctaatttctactcatcaaccaaataaaatgtaaaaaaaaaaaaccaaataaagtataaagaaaattgagattaagttgtttttctc 50194804  T
Q  99 aattaccaaaaaccacttttttcttccaatgagatagggtttgagccaattgacttttagcttttcttcttctttaaactataaattacgtcaaacatat 198  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50194803 atttaccaaaaaccacttttttcttccaatgagatagggtttgagccaattgacttttagcttttcttcttctttaaactataaattacgtcaaacatat 50194704  T
Q  199 tttgttagaagctctaaatatgaaaagagcttatactagaagaacaaaaatacaaaaaagtttaaatgtgtgttttgtccctataaataaggctctgttg 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  50194703 tttgttagaagctctaaatatgaaaagagcttatactagaagaacaaaaatacaaaaaagtttaaatatgtgttttgtccctataaataaggctttgttg 50194604  T
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  50194603 agccgaccctagttttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtcgagaaggagtggttttagatcattttttgac 50194504  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  50194503 ctaaaatcacctctctgcatcctttttcccttctctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgat 50194407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 311 - 495
Target Start/End: Original strand, 29921833 - 29922018
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggtttt-agatcattttttgacctaaaatcatc 409  Q
    ||||||||| ||||| |||  | ||||||||||||||||| ||||||||||  ||||||| ||| |||||||| || ||||||||||| |||||||||      
T  29921833 ttttttagtaagagatactctaccttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcact 29921932  T
Q  410 cctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
     |||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29921933 tctctccatcttttttcccctttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgat 29922018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 311 - 495
Target Start/End: Original strand, 29970986 - 29971171
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggtttt-agatcattttttgacctaaaatcatc 409  Q
    ||||||||| ||||| |||  | ||||||||||||||||| ||||||||||  ||||||| ||| |||||||| || ||||||||||| |||||||||      
T  29970986 ttttttagtaagagatactctaccttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcact 29971085  T
Q  410 cctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
     |||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29971086 tctctccatcttttttcccctttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgat 29971171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 302 - 489
Target Start/End: Original strand, 47895923 - 47896111
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||| |||| |||||||||||||| ||||||||||||||  |||| ||||| |||   | ||||| ||| |||||| |||||||||||||||||||    
T  47895923 cggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttatagatcattttttgaccta 47896022  T
Q  402 aaatcatccctctgcatcctttttc-ccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
     ||||| |||||| |||| |||||| | ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||    
T  47896023 gaatcacccctctacatcttttttctctttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgtttttt 47896111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 36461751 - 36461560
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||| ||||| |||||||||||  ||||||||||  |||| ||||| |||   | ||||| | |||||||||||| ||||||||||||    
T  36461751 agccggccctagttttctagtgtgagaaacttcatattctctctaaactttctttctccttcgttcatcgaggatgagtggttttaggtcattttttgac 36461652  T
Q  399 ctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| | ||| |||||| |||| |||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| |||||    
T  36461651 ctatattcacccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatcaagttttttcttttgtgtttttt 36461560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 311 - 475
Target Start/End: Complemental strand, 629214 - 629049
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    |||||||||||||||||||  ||||||||||||||||||| ||| ||||||| | ||||| ||| |||||||||| ||||| ||||||||||||||||||    
T  629214 ttttttagtgagagaaactctaacttctctctaagttttccttccctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcatcc 629115  T
Q  411 ctctgcatc-ctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
     ||||||||  ||||| ||  ||||||| ||||||||||||||||| |||| |||||||| |||||    
T  629114 ttctgcatcttttttttccccttctttcgatctaaataagtgattttcacaaatatcaagcgtttt 629049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 301 - 489
Target Start/End: Original strand, 33579639 - 33579827
Alignment:
Q  301 ccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcga-gaaggagtggttttagatcattttttgacc 399  Q
    ||||||||  |||| |||||||||||||||||||||||||||||  |||| || || |||   | |||| ||||| |||||||||  |||||||||||||    
T  33579639 ccggcccttgttttctagtgagagaaacttcaacttctctctaaactttctttatccttcgttcatcgaagaagg-gtggttttaagtcattttttgacc 33579737  T
Q  400 taaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    || ||||| |||||| |||| ||||||| ||||||||||||||||||||||||||| |||||||||| ||| |||||||||||| |||||    
T  33579738 tagaatcacccctctacatcttttttccattttctttcaatctaaataagtgattttcacatatatctagttttttcttttgtgtttttt 33579827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 305 - 483
Target Start/End: Complemental strand, 35865247 - 35865070
Alignment:
Q  305 ccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaa 404  Q
    ||||| |||| |||||||||||||||||||||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| ||| ||||||| ||||||    
T  35865247 ccctagttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcctcgaggaggggtggttttaggtca-tttttgatctaaaa 35865149  T
Q  405 tcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    |||||| ||| |||| ||||||| |||||||||||||||||||||||  ||| |||||||||||||| ||||||||||||    
T  35865148 tcatccttctacatcttttttcctcttttctttcaatctaaataagtagttttcacatatatcaagt-ttttcttttgtg 35865070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 311 - 489
Target Start/End: Complemental strand, 53808170 - 53807995
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||| | | ||||| ||| ||| ||||||||||    ||||||||||||| |||    
T  53808170 ttttttagtgagagaaactccaacttctctctaagttttccttctctttcgctcatcgaggaggggtgattttagatca--aattgacctaaaatc-tcc 53808074  T
Q  411 ctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
     |||||||| ||||| || |||| ||| ||||||||||||||||| |||| |||||| | ||||||||||||| |||||    
T  53808073 ttctgcatctttttttccctttcgttcgatctaaataagtgattttcacaaatatcaggcgttttcttttgtgtttttt 53807995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 298 - 495
Target Start/End: Complemental strand, 21290140 - 21289945
Alignment:
Q  298 gagccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttga 397  Q
    ||||| ||||||||||||||||||||||||||    ||||||||||||||||| | ||||||||| | | ||| ||  ||| |||||| ||| |||||||    
T  21290140 gagcctgccctaattttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatggaggagaggtgattttaggtcaatttttga 21290041  T
Q  398 cctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    |||| ||||| ||||||||||| ||||||||  ||||||||||| |||||||||||||  ||||| ||||||| |||||||| ||| ||||| |||||    
T  21290040 cctagaatcacccctctgcatcttttttccc-cttctttcaatccaaataagtgattttaacatacatcaagt-ttttctttcgtgtttttttgtgat 21289945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 302 - 480
Target Start/End: Complemental strand, 45568761 - 45568582
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||| |||| |||||||||||||| ||||||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| ||||||||||| |||    
T  45568761 cggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgatcta 45568662  T
Q  402 aaatcatccctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
     ||| |||| ||| |||| ||||| |||||||||||||||||||||||||  ||| ||||| |||||||| |||||||||    
T  45568661 gaataatccatctacatcttttttccccttttctttcaatctaaataagttgttttcacatctatcaagttttttctttt 45568582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 299 - 488
Target Start/End: Original strand, 10232839 - 10233029
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||| ||||| |||| ||||| |||||||| ||||||||||||||  |||| ||||| |||   | || || ||| |||||||||| ||||||||||||    
T  10232839 agccgaccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggtggttttaggtcattttttgac 10232938  T
Q  399 ctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    ||| ||||| |||||| |||| |||||||| ||||||||||||||||||||||| ||| ||| | |||||||| ||| |||||||| ||||    
T  10232939 ctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgttttt 10233029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 303 - 482
Target Start/End: Original strand, 54148764 - 54148941
Alignment:
Q  303 ggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaa 402  Q
    ||||||| |||| ||||||||||   ||||| ||||||||||  |||| ||||| |||  |  ||||| ||| |||||||||| |||||||||||||||     
T  54148764 ggccctagttttctagtgagaga---ttcaatttctctctaaactttctttctccttcgtcaatcgaggaggggtggttttaggtcattttttgacctac 54148860  T
Q  403 aatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgt 482  Q
    ||||| |||||| |||| ||||||| |||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||    
T  54148861 aatcacccctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgt 54148941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 305 - 489
Target Start/End: Original strand, 21431400 - 21431584
Alignment:
Q  305 ccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaa 404  Q
    ||||| |||| ||||| |||||||| ||||||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| |||||||| |||||||||    
T  21431400 ccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttt-gacctaaaa 21431498  T
Q  405 tcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| |||||| |||| |||||||| ||||||||||||||||||||||| ||| ||||| |||||||| |||  ||||||| |||||    
T  21431499 tcacccctctacatcttttttcccattttctttcaatctaaataagtggttttcacatctatcaagtttttctttttgtgtttttt 21431584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 304 - 480
Target Start/End: Complemental strand, 47042367 - 47042190
Alignment:
Q  304 gccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaa 403  Q
    ||||||||||| |||||| ||||||| ||||||||||||||  |||  || || |||   | ||||| ||| |||||||||| ||||||||| ||||| |    
T  47042367 gccctaattttctagtgaaagaaactccaacttctctctaaactttatttatccttcgttcatcgaggaggggtggttttaggtcattttttaacctata 47042268  T
Q  404 atcatccctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
    |||| |||||| |||| ||||| ||||||||||||||| |||||||||||||| ||||||||||| || |||||||||    
T  47042267 atcacccctctacatctttttttcccttttctttcaatttaaataagtgattttcacatatatcatgttttttctttt 47042190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 299 - 495
Target Start/End: Original strand, 8914473 - 8914669
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    |||| |||||||||||||||||||||||| |    ||||||||||||||||| | ||||||||| | ||||||||| ||| |||||| ||| ||||||||    
T  8914473 agcctgccctaattttttagtgagagaaattatgtcttctctctaagttttcttcctctttcactcatcgagaaggggtgattttaggtcaatttttgac 8914572  T
Q  399 ctaaaatcatccctctgcatccttttt--cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||| ||| | ||||||||||| |||||  ||| ||| ||| |||  ||||||| ||||| |||||| ||||||| |||||||| |||||||||||||||    
T  8914573 ctagaataacccctctgcatcttttttttccccttttttt-aattaaaataagggattttcacatacatcaagt-ttttctttcgtgctttttcgtgat 8914669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 304 - 489
Target Start/End: Complemental strand, 31272122 - 31271936
Alignment:
Q  304 gccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaagga-gtggttttagatcattttttgacctaa 402  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||| || || |||   | ||||| |||  ||| |||||| | ||||||| |||||     
T  31272122 gccctaattttctagtgagagaaactccaacttctctctaagttttctttttccttcgttcatcgaggagggtgtgattttaggttattttttaacctag 31272023  T
Q  403 aatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||||||||| | |||| ||| |||| ||||| ||||||||||||| || ||| ||||| |||||||| |||||||||||| |||||    
T  31272022 aatcatccctttacatcttttgtcccctttctatcaatctaaataaatggttttcacatttatcaagttttttcttttgtgtttttt 31271936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 302 - 480
Target Start/End: Original strand, 40487097 - 40487274
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    ||||||||||||| |||||||||||||| ||||||||||||||  |||| ||||| |||   | ||||| ||| ||| |||||| |||||||||||||||    
T  40487097 cggccctaattttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgaccta 40487196  T
Q  402 aaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
     |||||  | ||| |||| |||| |||||||||||||||||||||||||| ||| ||| | | |||||| |||||||||    
T  40487197 gaatcactcttctacatctttttccccttttctttcaatctaaataagtggttttcacttctttcaagt-ttttctttt 40487274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 338 - 489
Target Start/End: Original strand, 35175205 - 35175358
Alignment:
Q  338 tctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatttttt-gacctaaaatcatccc-tctgcatcctttttcccttttctt 435  Q
    ||||||||||||| ||||||||||| |||| |  ||| ||| |||||| ||||||||| |||||| ||||| ||| |||| ||  |||||| | |||| |    
T  35175205 tctctaagttttctttctctttcactcgtctaagaggggtgcttttaggtcatttttttgacctagaatcaccccctctgaatattttttctcctttcat 35175304  T
Q  436 tcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  35175305 tcaatctaaacaagtgatttccacatatatcaagtgttttcttttgtgtttttt 35175358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 48651055 - 48650863
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    |||| |||||| |||| |||||| ||||||| ||||||||||||||  |||| |||||  ||   | ||||| ||| |||||||||| ||||||||||||    
T  48651055 agcccgccctagttttctagtgaaagaaactccaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgac 48650956  T
Q  399 ctaaaatcatccctctgcatccttttt--cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||||||| |||||  |||| |||||  |||||||||||||||||  ||||||| ||| ||||| |||||||| ||| |||||||| |||||    
T  48650955 ctaaaatcacccctcgacatctttttttccccttttctttcaatctgtataagtggttttcacatctatcaagtttttccttttgtgtttttt 48650863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 302 - 479
Target Start/End: Complemental strand, 51303955 - 51303780
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||||||||||| |||||||||||    ||||||||||||||||| | |||||| || | ||||| |||  || |||||  ||| |||||||||||    
T  51303955 cggccctaattttttaatgagagaaactctgtcttctctctaagttttcttcctcttttactcatcgaggagggatgattttatgtcaatttttgaccta 51303856  T
Q  402 aaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
     ||||| ||||||||||| |||||||| ||| |||||||| ||||||||||||| |||||| ||||||| ||||||||    
T  51303855 gaatca-ccctctgcatcttttttcccctttttttcaatccaaataagtgattttcacatacatcaagt-ttttcttt 51303780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 308 - 495
Target Start/End: Original strand, 22290716 - 22290903
Alignment:
Q  308 taattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatca 407  Q
    |||||||||||||||||||||||||| |||| | ||||||||| ||||||||||| | | | | |||  || |||||  |||||||| || ||| |||||    
T  22290716 taattttttagtgagagaaacttcaatttctttttaagttttctttctctttcactcatagtggaggtatgattttaattcattttt-gatctagaatca 22290814  T
Q  408 tccctctgcatcctttttccct-tttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    || || |||||| ||||||||| ||||||| |||||||||||||||||| ||||||||| || | ||| |||||||| |||||| ||||    
T  22290815 tctctttgcatcttttttccctctttcttttaatctaaataagtgattttcacatatattaaatttttccttttgtgttttttcatgat 22290903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 380 - 495
Target Start/End: Original strand, 42460596 - 42460710
Alignment:
Q  380 ttttagatcattttttgacctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttctt 478  Q
    |||||| ||| |||||||||||||||||||  |||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  42460596 ttttaggtcagtttttgacctaaaatcatcaatctgcatcttttttccccttttctttcaatctaaataagtgatttccacatacatcaagt-ttttctt 42460694  T
Q  479 ttgtgctttttcgtgat 495  Q
    | ||| |||||||||||    
T  42460695 tcgtg-tttttcgtgat 42460710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 391 - 495
Target Start/End: Original strand, 53508082 - 53508186
Alignment:
Q  391 tttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttc 490  Q
    ||||||||||||||||| || ||||| || ||||||| |||||||||||| |||||||||||||| |||||||||||||| ||||||| |||| ||||||    
T  53508082 tttttgacctaaaatcacccatctgcgtcttttttcctttttctttcaatataaataagtgattttcacatatatcaagttttttcttctgtgttttttc 53508181  T
Q  491 gtgat 495  Q
    |||||    
T  53508182 gtgat 53508186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 299 - 488
Target Start/End: Original strand, 9998235 - 9998426
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatca-ttttttga 397  Q
    ||||| ||||| |||| ||||| |||||||| ||||||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| ||| ||||||||    
T  9998235 agccgaccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttga 9998334  T
Q  398 cctaaaatcatccctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    |||| ||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||| ||| | |||||||| |||  ||||||| ||||    
T  9998335 cctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttcattttgtgttttt 9998426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 43488917 - 43488719
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcg--------agaaggagtggttttagatcat 390  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  |||| ||||| ||||  | |||        ||  || |||| ||||| || |    
T  43488917 agccggccctagttttttagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgggggggggagggggggtgggtttaggtc-t 43488819  T
Q  391 tttttgacctaaaatcatccctctgcatcctttttccctttt-ctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||||||||| ||||| |||||| |||| |||||||||||| ||||||||||||||||||| ||| ||||| |||||||| ||||| |||||| |||||    
T  43488818 tttttgacctagaatcacccctctacatcttttttccctttttctttcaatctaaataagtggttttcacatctatcaagttttttcatttgtgtttttt 43488719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 6955016 - 6954825
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||| |||||  ||||||| ||||||||||||||  |||| ||||| |||   |   ||| ||| ||| |||||| ||||||||||||    
T  6955016 agccggccctagttttctagtggaagaaactccaacttctctctaaactttctttctccttcgttcactgaggaggggtgattttaggtcattttttgac 6954917  T
Q  399 ctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| ||||| |||||| |||| |||||||| |||||||||||||||||||||||  || ||||| |||||||| |||  ||||||| |||||    
T  6954916 ctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtgggtttcacatctatcaagtttttcattttgtgtttttt 6954825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 468
Target Start/End: Original strand, 7546397 - 7546550
Alignment:
Q  317 agtgagagaaacttcaa-cttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctg 415  Q
    ||||||||||| ||||| ||||||||||||||||| |||||| |||| | ||||| ||| ||| |||||| ||| ||||||| ||| ||||| |||||||    
T  7546397 agtgagagaaa-ttcaatcttctctctaagttttctttctctctcactcatcgaggaggggtgattttaggtcaatttttgatctagaatcacccctctg 7546495  T
Q  416 catc--ctttttcccttttctttcaatctaaataagtgatttccacatatatcaa 468  Q
    ||||   ||||||||  ||||||||||||||||||||||||| |||||| |||||    
T  7546496 catcttttttttcccccttctttcaatctaaataagtgattttcacatacatcaa 7546550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 488
Target Start/End: Original strand, 10108007 - 10108195
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||| ||||| |||| ||||| |||||||| ||||||||||||||  |||| ||||| ||    | ||||| ||| |||||||||| |||||||  |||    
T  10108007 agccgaccctagttttctagtgggagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtggttttaggtcatttt--gac 10108104  T
Q  399 ctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    ||| ||||| |||||| |||| |||||||| ||||||||||||||||||||||| ||| ||| | |||||||| ||| |||||||| ||||    
T  10108105 ctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgttttt 10108195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 305 - 483
Target Start/End: Complemental strand, 52923429 - 52923252
Alignment:
Q  305 ccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaa 404  Q
    ||||| ||||||||||  ||||||| ||||||||||||||  |||| ||||| |||   | | ||| ||  || ||||||  |||||||| |||||| ||    
T  52923429 ccctatttttttagtggaagaaactccaacttctctctaaactttctttctccttcgttcattgaggagaggtagttttaagtcattttt-gacctagaa 52923331  T
Q  405 tcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    ||| |||||| |||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||| ||| ||||||||    
T  52923330 tcacccctctacatcttttttcccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg 52923252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 311 - 452
Target Start/End: Original strand, 38142352 - 38142493
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||||||||||||||| ||  |||| | ||||||||| ||||||||||  | || |||| ||||| |||||| |||||||||||||||||||||  |    
T  38142352 ttttttagtgagagaaactccacattctttttaagttttctttctctttcattcatcaagaatgagtgattttagttcattttttgacctaaaatcactc 38142451  T
Q  411 ctctgcatcctttttcccttttctttcaatctaaataagtga 452  Q
     |||||||| ||||| |  |||||||||||| ||||||||||    
T  38142452 atctgcatctttttttcactttctttcaatcaaaataagtga 38142493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 346 - 483
Target Start/End: Original strand, 4821623 - 4821757
Alignment:
Q  346 ttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttc--ccttttctttcaatcta 443  Q
    ||||| ||||||||||  ||||||||||| |||||||||| ||||||||||||||| |||||  ||||||||||| |||||  | |||| ||||||||||    
T  4821623 ttttctttctctttcattcgtcgagaaggggtggttttaggtcattttttgacctataatcactcctctgcatccattttcctctttttttttcaatcta 4821722  T
Q  444 aataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    |||| || ||||||||||     |||||||||||||||||    
T  4821723 aataggttatttccacat-----aagtgttttcttttgtg 4821757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 330 - 489
Target Start/End: Complemental strand, 4396615 - 4396466
Alignment:
Q  330 tcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatttttt-gacctaaaatcatccctctgcatcctttttccc 428  Q
    ||||||||||| ||||||||| ||||||||| | |||||||   |||||||||||| | ||||||| |||||| ||||| ||||  ||||| ||||||||    
T  4396615 tcaacttctctttaagttttctttctctttcgctcgtcgag---gagtggttttaggttatttttttgacctagaatcacccct--gcatcttttttccc 4396521  T
Q  429 ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
     || |||||||| ||||||||||||||||||||     |||||||||||||||||||||||    
T  4396520 ctt-ctttcaatttaaataagtgatttccacat-----aagtgttttcttttgtgcttttt 4396466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 301 - 451
Target Start/End: Original strand, 32701269 - 32701420
Alignment:
Q  301 ccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacct 400  Q
    ||||||||| |||| |||||  ||||||| |||||||||| |||  |||| ||||| |||   | |||||  || |||||||||| ||||||||||||||    
T  32701269 ccggccctagttttctagtggaagaaactccaacttctctttaaactttctttctccttcgttcatcgaggtggggtggttttaggtcattttttgacct 32701368  T
Q  401 aaaatcatccctctgcatcctttttc-ccttttctttcaatctaaataagtg 451  Q
    | |||||||||||| |||| || ||| |||||||||||||||||||||||||    
T  32701369 agaatcatccctctacatctttcttctccttttctttcaatctaaataagtg 32701420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 306 - 495
Target Start/End: Original strand, 16235196 - 16235383
Alignment:
Q  306 cctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaat 405  Q
    |||||||||||||||||||| |||    ||||| | ||||||||| | ||||||||| | | ||| | ||||| |||||| ||| ||||||||||| |||    
T  16235196 cctaattttttagtgagagatactatgtcttcttt-taagttttcttcctctttcactcattgaggatgagtgattttaggtcaatttttgacctagaat 16235294  T
Q  406 catccctctgcatcctttttcccttttctttcaatctaaataagtga-tttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||  | |||||||| ||||||| |||| ||||||||||||||||||| ||| |||||| ||||||| |||||||| ||| |||||||||||    
T  16235295 cactcatctgcatcttttttccttttt-tttcaatctaaataagtgatttttcacatacatcaagt-ttttctttcgtgttttttcgtgat 16235383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 299 - 488
Target Start/End: Original strand, 10229243 - 10229435
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatttttt--g 396  Q
    ||||| ||||| |||| ||||| |||||||| ||| ||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| || ||||||  |    
T  10229243 agccgaccctagttttctagtgggagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttttgg 10229342  T
Q  397 acctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    ||||| ||||| | |||| |||| |||||||| ||||||||||||||||||||||| ||| ||| | |||||||| ||| |||||||| ||||    
T  10229343 acctagaatcaccactctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgttttt 10229435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 299 - 483
Target Start/End: Original strand, 40556480 - 40556665
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||| ||||| |||||||| |||||||| |||||  |||| ||||| |||   | ||||| ||| |||||||||| ||||||||||||    
T  40556480 agccggccctagttttctagtgggagaaactccaacttctttctaaactttctttctcattcgttcatcgaggaggggtggttttaggtcattttttgac 40556579  T
Q  399 ctaaaatcatccctctgcatc-ctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    ||| ||||| |||||  ||||  ||||||||||||||||  || |||||||||| ||| || || |||||||| ||  ||||||||    
T  40556580 ctagaatcacccctccacatctttttttcccttttcttttgatataaataagtggttttcatatctatcaagttttcccttttgtg 40556665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 376 - 489
Target Start/End: Complemental strand, 9797773 - 9797658
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatccttttt--cccttttctttcaatctaaataagtgatttccacatatatcaagtgtt 473  Q
    |||||||||| ||||||||||||||| ||||| |||||| |||| |||||  | |||||||||||||||||||||||| ||| ||||| |||||||| |     
T  9797773 gtggttttaggtcattttttgacctagaatcacccctctacatcttttttttctcttttctttcaatctaaataagtggttttcacatctatcaagtttc 9797674  T
Q  474 ttcttttgtgcttttt 489  Q
    | |||||||| |||||    
T  9797673 tacttttgtgtttttt 9797658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 12947469 - 12947410
Alignment:
Q  430 tttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12947469 tttccttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgtttttt 12947410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 489
Target Start/End: Original strand, 9319832 - 9320016
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||||||||| ||||||||  ||||||||||||| |||||  | || ||||    ||||| |||||||||||||||| | ||||||||    
T  9319832 agccggccctagttttttagtgggagaaactctaacttctctctaaattttccct-tcgttca----tcgaggaggagtggttttagatta-tttttgac 9319925  T
Q  399 ctaaaatcatccctctgcatc-ctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
     || ||||| |||||| ||||  |||||||| ||| |||||||| ||||||||| ||| ||||| |||||||| ||| |||||||| |||||    
T  9319926 atataatca-ccctctacatctttttttcccctttttttcaatcaaaataagtggttttcacatctatcaagtttttccttttgtgtttttt 9320016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 470
Target Start/End: Complemental strand, 23800230 - 23800057
Alignment:
Q  301 ccggccctaattttttagtgagagaaacttcaactt-ctctctaagttttcgttctctttcacccgtcgagaaggag--tggttttagatcattttttga 397  Q
    ||||||||| |||| |||||||||||||||||| || |||||||| ||||  ||||| ||||  | ||||  ||| |  ||||||||| | |||||||||    
T  23800230 ccggccctagttttctagtgagagaaacttcaaatttctctctaaattttttttctccttcattcatcgaagaggggggtggttttaggttattttttga 23800131  T
Q  398 cctaaaatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    |||||||| |  | ||| |||| ||||||| |||||||||||||||||||||||| |||  |||||||||||||    
T  23800130 cctaaaattactcttctacatcttttttcctcttttctttcaatctaaataagtggtttttacatatatcaagt 23800057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 305 - 470
Target Start/End: Original strand, 43016630 - 43016796
Alignment:
Q  305 ccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatca--ttttttgacctaa 402  Q
    ||||| |||| ||||||||||||||  ||||||||||||| ||||| |||||||||   | ||||| | | |||||||||| |||  | ||||||||||     
T  43016630 ccctagttttctagtgagagaaactctaacttctctctaaattttctttctctttcgttcatcgaggaagggtggttttaggtcagttcttttgacctag 43016729  T
Q  403 aatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    ||||| |||||  | || |||||||| ||||||||||| || ||||||||||| ||||||||| ||||    
T  43016730 aatcacccctccacgtcttttttcccctttctttcaatttatataagtgattt-cacatatattaagt 43016796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 390 - 489
Target Start/End: Complemental strand, 52116239 - 52116140
Alignment:
Q  390 ttttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||||| ||||| |||||| | |||||||| ||||| || ||| ||| ||| |||||||||||||| |||||||||||||| |||||||||||| |||||    
T  52116239 ttttttaacctagaatcattcatctgcatctttttttccctttgttttaatttaaataagtgattttcacatatatcaagttttttcttttgtgtttttt 52116140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 377 - 470
Target Start/End: Complemental strand, 7449144 - 7449050
Alignment:
Q  377 tggttttagatcattttttgacctaaaatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    ||||||||| |||||||||||| || |||| ||||||| |||| ||||||| |||||||||||||||||||||||| ||| | ||| ||||||||    
T  7449144 tggttttaggtcattttttgacatagaatcgtccctctacatcttttttcctcttttctttcaatctaaataagtggttttcgcatctatcaagt 7449050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 377 - 470
Target Start/End: Complemental strand, 7457286 - 7457192
Alignment:
Q  377 tggttttagatcattttttgacctaaaatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    ||||||||| |||||||||||| || |||| ||||||| |||| ||||||| |||||||||||||||||||||||| ||| | ||| ||||||||    
T  7457286 tggttttaggtcattttttgacatagaatcgtccctctacatcttttttcctcttttctttcaatctaaataagtggttttcgcatctatcaagt 7457192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 391 - 489
Target Start/End: Original strand, 37040632 - 37040728
Alignment:
Q  391 tttttgacctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||||||||| ||||| |||||| |||| |||||||| ||||||||||||||||||||||| ||| ||||||   ||||||||| |||||||| |||||    
T  37040632 tttttgacctagaatcacccctctacatcttttttcccattttctttcaatctaaataagtggttttcacata---caagtgtttccttttgtgtttttt 37040728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 12150102 - 12149913
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttc---tct-ttcacccgtcgagaaggagtggttttagatcattttt 394  Q
    |||| |||||| ||||||||||||||| |||||||||||||| |||  |||| |||   ||| ||||    ||||| ||| |||||||||  | ||||||    
T  12150102 agcctgccctagttttttagtgagagacacttcaacttctctataaactttctttcaaatctgttca----tcgaggaggggtggttttaagttattttt 12150007  T
Q  395 tgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||||| ||||| |||||| || |||||||  ||||||||| || ||||||||||| |||  ||||||||| ||| ||| |||||||| |||||    
T  12150006 tgacctataatcacccctctaca-cctttttttcttttcttttaagctaaataagtggtttttacatatatccagtttttgcttttgtgattttt 12149913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 302 - 489
Target Start/End: Complemental strand, 20465283 - 20465099
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||| |||| | ||||||||||||||||||||  | ||| ||| | ||||| ||||  | || || ||| |||||||||  |||||||| ||| ||    
T  20465283 cggccctagttttcttgtgagagaaacttcaacttccttttaaattt-ctttctccttcattcatcaagtaggggtggttttatgtcattttt-gacata 20465186  T
Q  402 aaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
     ||||| |||||| | || |||| ||||||| ||||||| ||||||||||||||  ||||||||||||| ||| |||||||| |||||    
T  20465185 gaatcacccctctccctctttttcccctttt-tttcaatataaataagtgattttaacatatatcaagtttttccttttgtgtttttt 20465099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 311 - 478
Target Start/End: Complemental strand, 21534116 - 21533949
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    |||||||||||||||||||  || ||||||||||  |||| ||||| |||     ||||| | | |||||||||| ||  ||||||||||| ||||| ||    
T  21534116 ttttttagtgagagaaactctaatttctctctaaactttctttctccttcgttaatcgaggatgggtggttttaggtc--tttttgacctagaatcaccc 21534019  T
Q  411 ctctgcatcctttttccct--tttctttcaatctaaataagtgatttccacatatatcaagtgttttctt 478  Q
    |||| |||| ||||| |||  |||||| ||||||||||||||| ||| ||||| |||||||| |||||||    
T  21534018 ctctacatctttttttcctcttttcttccaatctaaataagtggttttcacatctatcaagttttttctt 21533949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 483
Target Start/End: Complemental strand, 20609176 - 20609025
Alignment:
Q  340 tctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatccttttt--------cccttt 431  Q
    |||||| |||| ||||| ||||  ||||||| ||| ||| |||||  | ||||||||||||||||||| |||||| |||| |||||        | ||||    
T  20609176 tctaagctttctttctccttcattcgtcgaggaggggtgattttaagttattttttgacctaaaatcaaccctctacatcttttttttttttttctcttt 20609077  T
Q  432 tctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    |||||||||||||||||||| |||  ||||||||||||| ||| ||||||||    
T  20609076 tctttcaatctaaataagtggttttaacatatatcaagtttttccttttgtg 20609025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 390 - 495
Target Start/End: Complemental strand, 36910870 - 36910764
Alignment:
Q  390 ttttttgacctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    |||||| ||||| |||||  ||||| |||| |||||||| ||||||||||||||||||||||| ||| ||||| |||||||| ||| ||| |||| ||||    
T  36910870 tttttttacctagaatcactcctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttctgtgttttt 36910771  T
Q  489 tcgtgat 495  Q
    | |||||    
T  36910770 ttgtgat 36910764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 395
Target Start/End: Original strand, 14859273 - 14859362
Alignment:
Q  306 cctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatttttt 395  Q
    |||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||||   | ||| ||| ||| |||||| |||||||||    
T  14859273 cctagttttttagcgagagaaacttcaacttctctctaagttttcattctttttcacttattgaggaggggtgattttaggtcatttttt 14859362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 440 - 489
Target Start/End: Original strand, 44804934 - 44804983
Alignment:
Q  440 tctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  44804934 tctaaataagtgatttccacatatatcaagtgttttcttctgtgtttttt 44804983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 334 - 489
Target Start/End: Original strand, 29239143 - 29239297
Alignment:
Q  334 cttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatc-ctttttccctttt 432  Q
    ||||||| ||||||||| ||||||||||   |||||||| | |||||||||| ||||||||||| ||| ||||| ||| || ||||  |||||  | |||    
T  29239143 cttctctttaagttttctttctctttcatttgtcgagaaag-gtggttttaggtcattttttgatctagaatca-ccccctacatctttttttttccttt 29239240  T
Q  433 ctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||  |||||||||| |||||| |||||||||   ||||||||||||||| |||||    
T  29239241 ctttagatctaaataaatgattttcacatatattcggtgttttcttttgtgtttttt 29239297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 311 - 470
Target Start/End: Original strand, 29249024 - 29249183
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttt-tagatcattttttgacctaaaatcatc 409  Q
    |||||||||||||||||||  ||||||||| ||| ||||| ||||| ||||| | ||||||||   || |||  || ||| ||||||||||| |||||      
T  29249024 ttttttagtgagagaaactctaacttctctttaatttttctttctccttcactcatcgagaagtgatgatttgaaggtcactttttgacctagaatcact 29249123  T
Q  410 cctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
     |||| ||| ||||||||  |||| ||| ||||||||||||| ||| ||||||||||||||    
T  29249124 tctcttcat-ctttttcctctttcgttcgatctaaataagtgtttttcacatatatcaagt 29249183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 411 - 479
Target Start/End: Original strand, 51923611 - 51923678
Alignment:
Q  411 ctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| |||||  ||||||| ||||||||    
T  51923611 ctctgcatcttttttcccctttctttcaatctaaataagtgattttcacatgcatcaagt-ttttcttt 51923678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 414
Target Start/End: Original strand, 38545616 - 38545719
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    |||| |||||||||||||||||||||||||||||  |||| ||||| |||   | | ||| ||  |||||||||| ||||||||||||||| |||||| |    
T  38545616 ttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcattgaggagtggtggttttaggtcattttttgacctagaatcattc 38545715  T
Q  411 ctct 414  Q
    ||||    
T  38545716 ctct 38545719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 376 - 462
Target Start/End: Complemental strand, 25631730 - 25631646
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacata 462  Q
    |||||||| | ||| |||||||||||||||||||||||| ||| ||||||| | | | |||||||||||||||||||||| ||||||    
T  25631730 gtggttttgggtcaatttttgacctaaaatcatccctctccat-ctttttctc-tctatttcaatctaaataagtgattttcacata 25631646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 428 - 489
Target Start/End: Complemental strand, 20987989 - 20987928
Alignment:
Q  428 cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||||||||||| |||||||||||||| || ||||||| ||| |||||||||||| |||||    
T  20987989 cttttctttcaatttaaataagtgattttcaaatatatcgagttttttcttttgtgtttttt 20987928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 20988075 - 20988030
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaa 344  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  20988075 agccggccctagttttttagtgagagaaactccaacttctctctaa 20988030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 464
Target Start/End: Original strand, 32245438 - 32245499
Alignment:
Q  403 aatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatata 464  Q
    |||||||| || ||||| ||| |||| ||||||| |||||||||||||||||||||||||||    
T  32245438 aatcatccgtccgcatcttttatcccatttcttttaatctaaataagtgatttccacatata 32245499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 355
Target Start/End: Complemental strand, 9688541 - 9688498
Alignment:
Q  312 tttttagtgagagaaacttcaacttctctctaagttttcgttct 355  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||    
T  9688541 tttttagtgagagaaacttcaacttctctctaaattttctttct 9688498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 303 - 465
Target Start/End: Complemental strand, 40957168 - 40957007
Alignment:
Q  303 ggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaa 402  Q
    ||||||| |||||| | |||||||||||||  |||||||||||||||  ||||| ||||| | || || |||  | ||||||||||||||||| | |||     
T  40957168 ggccctagttttttcgcgagagaaacttcatattctctctaagtttt-tttctccttcactcatccaggagggattgttttagatcattttttaatctac 40957070  T
Q  403 aatcatcc-ctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatat 465  Q
    ||||| ||  | |||||  |||||| | |||||||||||||||||||||| |||  ||||||||    
T  40957069 aatcacccgttatgcatattttttctc-tttctttcaatctaaataagtggtttttacatatat 40957007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 302 - 451
Target Start/End: Complemental strand, 953724 - 953566
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttg----- 396  Q
    |||| ||| |||| |||||||||||||| ||  |||||||||||||||| ||||| ||||  | | ||| || ||||||||||| || ||||||          
T  953724 cggctctagttttatagtgagagaaactccacattctctctaagttttctttctccttcattcattgaggagaagtggttttaggtcttttttttttttt 953625  T
Q  397 ---acctaaaatcatccctctgcatccttttt-cccttttctttcaatctaaataagtg 451  Q
       | ||| |||||  |||||||||| ||||| ||||||||||||||||||||||||||    
T  953624 tttatctagaatcactcctctgcatctttttttcccttttctttcaatctaaataagtg 953566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 483
Target Start/End: Original strand, 3785710 - 3785806
Alignment:
Q  387 tcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatc-aagtgttttcttttgtg 483  Q
    |||||||||||| || |||||  | |||||||| ||||||| ||| ||||||||  |||||||||||||  ||||||||| ||| |||||||||||||    
T  3785710 tcattttttgacttagaatcacacatctgcatcttttttccgttt-ctttcaattcaaataagtgatttttacatatatctaagagttttcttttgtg 3785806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 376 - 461
Target Start/End: Complemental strand, 26276036 - 26275951
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacat 461  Q
    |||||||||| | ||||||||||||||||||| |||||  |||  |||  || |||||||||||| |||||||||| ||| |||||    
T  26276036 gtggttttaggtaattttttgacctaaaatcaaccctcgacattttttacccattttctttcaatttaaataagtggttttcacat 26275951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 469
Target Start/End: Original strand, 1649320 - 1649359
Alignment:
Q  430 tttctttcaatctaaataagtgatttccacatatatcaag 469  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  1649320 tttctttcaatctaaataagtggttttcacatatatcaag 1649359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 344
Target Start/End: Complemental strand, 1803282 - 1803243
Alignment:
Q  305 ccctaattttttagtgagagaaacttcaacttctctctaa 344  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  1803282 ccctaattttttagtgaaagaaactccaacttctctctaa 1803243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 478
Target Start/End: Complemental strand, 24176328 - 24176241
Alignment:
Q  391 tttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctt 478  Q
    ||||||||||||||  || ||| || ||| |||| | | ||||||||||||||||||| ||  || |||||||||||||| |||||||    
T  24176328 tttttgacctaaaagtattcctatgtatctttttcctcatttctttcaatctaaataattgggtttcacatatatcaagttttttctt 24176241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 459
Target Start/End: Complemental strand, 25461317 - 25461159
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatt-ttttgacct 400  Q
    |||||||| ||||||||||| |||||||||| ||||| | ||||||    || || ||||| | | ||| | | || ||||||| ||||| |||||||||    
T  25461317 cggccctagttttttagtgaaagaaacttcaccttctgtttaagttccttttttccttcactcatagaggatg-gttgttttaggtcattattttgacct 25461219  T
Q  401 aaaatcatccctctgcatcctttttcccttttcttt-caatctaaataagtgatttccac 459  Q
    ||||| | ||||||||||| |||||   |||| ||| ||||||||||||| |||||||||    
T  25461218 aaaataacccctctgcatcttttttttttttttttttcaatctaaataagcgatttccac 25461159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 488
Target Start/End: Original strand, 3823436 - 3823494
Alignment:
Q  430 tttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    |||||||||||  |||||||||||||  ||||||| |||| ||||||||||||| ||||    
T  3823436 tttctttcaattcaaataagtgatttttacatataacaagagttttcttttgtgttttt 3823494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 340
Target Start/End: Complemental strand, 36910975 - 36910934
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctct 340  Q
    ||||||||||| |||| |||||||||||||| ||||||||||    
T  36910975 agccggccctagttttctagtgagagaaactccaacttctct 36910934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 488
Target Start/End: Complemental strand, 38860361 - 38860249
Alignment:
Q  378 ggttttagatcattttttgacctaaaatcatccctctgcatcctttttccc--ttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    |||| ||| ||| |||||||  || |||||||||||| |||| ||||| |   ||||||||||||  ||||||||| ||| ||||| |||||||| ||||    
T  38860361 ggttctaggtcaatttttgatatagaatcatccctctacatctttttttctctttttctttcaattcaaataagtggttttcacatctatcaagtttttt 38860262  T
Q  476 cttttgtgctttt 488  Q
    | |||||| ||||    
T  38860261 cctttgtgttttt 38860249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 434 - 466
Target Start/End: Original strand, 2342419 - 2342451
Alignment:
Q  434 tttcaatctaaataagtgatttccacatatatc 466  Q
    |||||||||||||||||||||| ||||||||||    
T  2342419 tttcaatctaaataagtgattttcacatatatc 2342451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 458
Target Start/End: Complemental strand, 7887597 - 7887569
Alignment:
Q  430 tttctttcaatctaaataagtgatttcca 458  Q
    |||||||||||||||||||||||||||||    
T  7887597 tttctttcaatctaaataagtgatttcca 7887569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 153; Significance: 7e-81; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 311 - 495
Target Start/End: Complemental strand, 58387 - 58203
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| ||||||||||||||||||||| ||    
T  58387 ttttttagtgagagaaactccaacttctctctaagttttcgttttctttcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcaccc 58288  T
Q  411 ctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  58287 ctctgcatccttttttccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 58203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 9e-62; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 301 - 489
Target Start/End: Original strand, 22300636 - 22300824
Alignment:
Q  301 ccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacct 400  Q
    ||||||||| |||||||| |||||||||| |||||||||||||| ||||  ||||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  22300636 ccggccctagttttttagagagagaaactccaacttctctctaaattttatttctctttcactcgtcgaggaggagtggttttaggtcattttttgacct 22300735  T
Q  401 aaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||||| |||| ||||||||||||| ||||||||||||| |||||||||||||| ||| ||||||||||| |||||||||| ||||||    
T  22300736 aaaatcacccctttgcatcctttttctcttttctttcaatttaaataagtgattttcacgtatatcaagtgctttcttttgtacttttt 22300824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 311 - 489
Target Start/End: Complemental strand, 47320709 - 47320531
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||| | | ||||||||| |||||||||| ||||| |||||| ||||||||       
T  47320709 ttttttagtgagagaaacttcaacttctctttaagttttccttctctttcgctcatcgagaaggggtggttttaggtcattctttgacttaaaatcacaa 47320610  T
Q  411 ctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||||||| |||||||| |||| ||| ||||||||||||||||| |||| |||||||| ||||||||||||| |||||    
T  47320609 ctctgcatcttttttcccctttcgttcgatctaaataagtgattttcacaaatatcaagcgttttcttttgtgtttttt 47320531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 302 - 489
Target Start/End: Complemental strand, 51888533 - 51888346
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||| ||||||| |||||||||||||||||| |||||| |||||| ||||||||||| | ||||| ||| |||||||||| |||||||||||| |     
T  51888533 cggccctagttttttattgagagaaacttcaacttttctctacgttttctttctctttcactcatcgaggaggggtggttttaggtcattttttgacatt 51888434  T
Q  402 aaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
     ||||| ||||||  ||| ||| |||| |||||| | ||||||| ||||||||| ||||||||||||||||||||||||||| |||||    
T  51888433 gaatcacccctctcaatcttttatcccctttcttccgatctaaacaagtgattttcacatatatcaagtgttttcttttgtgtttttt 51888346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 311 - 488
Target Start/End: Original strand, 54021662 - 54021840
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||||||||||||||||||| ||||||||||  |||| ||||  ||||  | |||||   |||||||||||| |||||||||||| |||||||||||    
T  54021662 ttttttagtgagagaaacttcaatttctctctaaactttctttcttcttcattcatcgagggagagtggttttaggtcattttttgacataaaatcatcc 54021761  T
Q  411 ctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    |||| |||| ||||||| |||||||||||||||||||||||| ||| |||||||||| ||| ||| |||||||| ||||    
T  54021762 ctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatccagtttttccttttgtgttttt 54021840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 302 - 479
Target Start/End: Original strand, 36194505 - 36194681
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    ||||| |||||||||||||||||||| ||   ||||||||||||||||| | |||||||||   ||||| | | ||| |||||||||| |||||||||||    
T  36194505 cggccttaattttttagtgagagaaattttgtcttctctctaagttttcttcctctttcacttatcgaggatgggtgattttagatcaatttttgaccta 36194604  T
Q  402 aaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
    ||| |||||||||||||| |||||| | ||||||||||| |||||||||||||| |||||| ||||||| ||||||||    
T  36194605 aaaacatccctctgcatcttttttctcctttctttcaatttaaataagtgattttcacatacatcaagt-ttttcttt 36194681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 311 - 489
Target Start/End: Original strand, 2520578 - 2520757
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    |||| |||||||||||||| ||||||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| ||||||||||||||| ||||| ||    
T  2520578 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccc 2520677  T
Q  411 ctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||| |||| ||||| |||||||| ||||||||||||||||| ||| ||||| |||||||| |||||||||||| |||||    
T  2520678 ctctacatcttttttccccttttcgttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgtttttt 2520757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 298 - 489
Target Start/End: Original strand, 22610972 - 22611163
Alignment:
Q  298 gagccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttga 397  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||  |||| ||||| |||   ||||||| ||| |||||||||| ||| |||||||    
T  22610972 gagccggccctagttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcgtcgaggaggggtggttttaggtca-tttttga 22611070  T
Q  398 cctaaaatcatccctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||| ||||| || ||| |||| ||||| |||||||||||||||||||||||||| ||| ||||| |||||||| | | |||||||| |||||    
T  22611071 cctagaatcacccatctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttatccttttgtgtttttt 22611163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 311 - 488
Target Start/End: Original strand, 9643178 - 9643359
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcga-gaaggagtggttttagatcattttttgacctaaaatcatc 409  Q
    ||||||||||||||||||| |||||||||||||||||||| || |||||  | | |||| || || |||||||||  ||||||||||||||| |||||      
T  9643178 ttttttagtgagagaaactccaacttctctctaagttttctttatcttttgctcatcgaagagggggtggttttatgtcattttttgacctagaatcact 9643277  T
Q  410 cctctgcatccttttt---cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    | |||||||| |||||   ||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  9643278 catctgcatctttttttttcccatttctttcgatctaaataagtgattttcacatatatcatgtgttttcttttgtgttttt 9643359  T

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Target: chr4; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 26633990 - 26633800
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    |||||| |||| ||||||||||||||||||| ||||||||||||||  |||| ||||  |||   | | ||| ||| ||||| |||| ||||||||||||    
T  26633990 agccggtcctagttttttagtgagagaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggtggtcttaggtcattttttgac 26633891  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| ||||| |||| | |||| |||| | |||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||| |||||    
T  26633890 ctagaatcacccctatacatctttttcctcttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgtttttt 26633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 298 - 489
Target Start/End: Complemental strand, 4143075 - 4142884
Alignment:
Q  298 gagccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttga 397  Q
    |||||| ||||| |||||||||| |||||||| |||||||||| |||  |||| ||||| ||    | ||||| ||| |||||||||| |||||||||||    
T  4143075 gagccgaccctagttttttagtgggagaaactccaacttctctataaactttctttctcctttgttcatcgaggaggggtggttttaggtcattttttga 4142976  T
Q  398 cctaaaatcatccctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||| ||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||| |||||    
T  4142975 cctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtg-ttttcacatctatcaagtttttccttttgtgtttttt 4142884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 312 - 495
Target Start/End: Complemental strand, 22039105 - 22038923
Alignment:
Q  312 tttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccc 411  Q
    ||||| ||||||||||||| ||||| | || |||||||| ||||||||||| | ||||| ||| |||||||||| ||| |||| || ||| ||||| |||    
T  22039105 ttttttgtgagagaaactttaacttttttcaaagttttctttctctttcactcatcgagcaggggtggttttaggtcaattttggatctagaatca-ccc 22039007  T
Q  412 tctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttt-ttcgtgat 495  Q
    | |||||| ||||||||||| ||||| ||||||||||||||||| ||||| |||||||| |||||||||||| ||| ||||||||    
T  22039006 tttgcatcttttttcccttt-ctttctatctaaataagtgattttcacatctatcaagttttttcttttgtgttttattcgtgat 22038923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 299 - 479
Target Start/End: Original strand, 27651737 - 27651916
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||| ||||||||||||||||||||||| |    ||||||||||| ||||| | ||||||||| | ||||| ||| ||| | |||| ||| ||||||||    
T  27651737 agccgcccctaattttttagtgagagaaattctgtcttctctctaaattttcttcctctttcactcatcgaggaggggtgatgttaggtcaatttttgac 27651836  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
    |||  |||| || |||||||| |||||||| |||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  27651837 ctaggatcacccatctgcatcttttttcccatttctttcaatctaaataagtgattttcacatacatcaagt-ttttcttt 27651916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 299 - 470
Target Start/End: Original strand, 18935576 - 18935746
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    |||||||||||| ||||||||||||||||||    ||||||||||||||||| | ||||||| | | ||||| ||| ||| ||| || ||| ||||||||    
T  18935576 agccggccctaagtttttagtgagagaaactctgtcttctctctaagttttcttcctctttcgctcatcgaggaggggtgatttaaggtcaatttttgac 18935675  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    ||| ||||| ||||||||||| |||||||| ||||||| ||||||||| |||||||| |||||| |||||||    
T  18935676 ctagaatca-ccctctgcatcttttttcccctttcttttaatctaaattagtgattttcacatacatcaagt 18935746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 391 - 495
Target Start/End: Original strand, 52944193 - 52944293
Alignment:
Q  391 tttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttc 490  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||    |||||||||||||||||||||||    
T  52944193 tttttgatctaaaatcatccctctgtatcatttttcccttttctttcaatctaaataagtgattttcacatat----agtgttttcttttgtgctttttc 52944288  T
Q  491 gtgat 495  Q
    |||||    
T  52944289 gtgat 52944293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 299 - 489
Target Start/End: Original strand, 35348095 - 35348284
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||| ||||| |||| |||||| ||||||| |||||||||| |||  |||  ||||| ||| | | ||| | ||| ||| |||||| ||||||||||||    
T  35348095 agccgcccctagttttctagtgaaagaaactccaacttctctttaaactttttttctccttcgctcatcgtggaggggtgattttaggtcattttttgac 35348194  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| ||||| | |||| |||| ||||||||||||||||||||||||||||||| ||| |||| ||||||||| |||||||||||| |||||    
T  35348195 ctagaatcacctctctacatcttttttcccttttctttcaatctaaataagtggttttcacaaatatcaagt-ttttcttttgtgtttttt 35348284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 302 - 489
Target Start/End: Complemental strand, 19853828 - 19853641
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||| |||| ||||| |||||||| ||||||||||||||  |||| ||| | ||||  | ||||| ||| |||||||||| |||||||| ||||||    
T  19853828 cggccctagttttctagtgggagaaactccaacttctctctaaactttctttccccttcattcatcgaggaggggtggttttaggtcattttt-gaccta 19853730  T
Q  402 aaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
     ||||| |||||| |||| |||||||| ||||||| ||||||||||||||| ||| ||||| |||||||| ||||||||| || |||||    
T  19853729 gaatcacccctctacatcttttttccccttttcttccaatctaaataagtggttttcacatctatcaagttttttcttttttgtttttt 19853641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 306 - 489
Target Start/End: Complemental strand, 21686553 - 21686370
Alignment:
Q  306 cctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaat 405  Q
    |||| |||| ||||||||||||||| |||||||||||||  |||| ||||| ||    | ||||| ||| ||||||| || || ||||||||||||||||    
T  21686553 cctagttttctagtgagagaaactttaacttctctctaaactttctttctcctttgttcatcgaggaggggtggtttgaggtc-ttttttgacctaaaat 21686455  T
Q  406 catccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    || |||||| |||| |||||||| ||||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||| |||||    
T  21686454 cacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttt 21686370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 302 - 480
Target Start/End: Original strand, 9713693 - 9713878
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttg----- 396  Q
    |||||||| |||||||||||||||||||  | |||||||||||||| || ||||||||||| | ||||| ||| ||| |||||  || ||||||          
T  9713693 cggccctagttttttagtgagagaaactctaccttctctctaagttctctttctctttcactcatcgaggaggggtgattttatgtcttttttttttttt 9713792  T
Q  397 --acctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
      ||||| |||||   |||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9713793 ttacctagaatcacttctctacatcttttttcccctttctttcaatctaaataagtgatttccacatatatcaagttttttctttt 9713878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 311 - 489
Target Start/End: Original strand, 33920853 - 33921031
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttga-cctaaaatcatc 409  Q
    |||||||||||||||||||||||||| || ||||  |||| ||||  ||||  | ||||||| | |||||||||| ||||||||| | || |||| || |    
T  33920853 ttttttagtgagagaaacttcaacttttccctaaactttctttcttcttcattcatcgagaatgggtggttttaggtcatttttttaacccaaaagcacc 33920952  T
Q  410 cctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    | ||| |||| ||||| |||||||||||||||  ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  33920953 catctacatctttttttcccttttctttcaat--aaataagtgattttcacatatatcaagttttttcttttgtgcttttt 33921031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 310 - 475
Target Start/End: Complemental strand, 36204689 - 36204525
Alignment:
Q  310 attttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatc 409  Q
    ||||||||||||||| |||| || |||||||||| |||||| ||||||||||  | || || | |  ||||||||| ||||||||| ||||| ||||| |    
T  36204689 attttttagtgagaggaactccaccttctctctaggttttctttctctttcaatcatcaaggatggatggttttaggtcatttttt-acctagaatcacc 36204591  T
Q  410 cctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    |||||||||  | ||||| ||||||||| || ||||||||||||||||||||| ||||||||||||    
T  36204590 cctctgcattttgtttcctttttctttcgatttaaataagtgatttccacatagatcaagtgtttt 36204525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 303 - 489
Target Start/End: Original strand, 13633907 - 13634095
Alignment:
Q  303 ggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaa 402  Q
    ||||||| |||| |||||||||||||| ||||||||||||||  |||| ||||| ||| | | ||||| ||  |||||||||| ||| |||||||| ||     
T  13633907 ggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgctcatcgaggagtggtggttttaggtca-tttttgacatag 13634005  T
Q  403 aatcatccctctgcatccttt---ttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||| |||||| |||| |||     |||||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||| |||||    
T  13634006 aatcacccctctacatcttttccccccccttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgtttttt 13634095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 312 - 459
Target Start/End: Complemental strand, 22064087 - 22063940
Alignment:
Q  312 tttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccc 411  Q
    ||||||||||||||||||||| ||||||||||||||  | |||| |||||| | || || | || |  |||||| ||||||||||||||| ||||| |||    
T  22064087 tttttagtgagagaaacttcaccttctctctaagttcgctttctatttcactcatcaaggatgactaattttaggtcattttttgacctagaatcacccc 22063988  T
Q  412 tctgcatcctttttcccttttctttcaatctaaataagtgatttccac 459  Q
    |||||||  |||||| | |||||||||||||||||||||| |||||||    
T  22063987 tctgcatattttttctcctttctttcaatctaaataagtgttttccac 22063940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 312 - 488
Target Start/End: Complemental strand, 22558772 - 22558594
Alignment:
Q  312 tttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccc 411  Q
    ||||||| |||||||||| ||| ||||||||||  |||| ||||| |||   | | ||| ||| |||||||||| |||||||||||| || ||||| | |    
T  22558772 tttttagagagagaaactccaatttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacctc 22558673  T
Q  412 tctgcatcctttttccc--ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    ||| |||| ||||||||  ||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||| ||||    
T  22558672 tctacatcttttttcccctttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttt 22558594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 299 - 489
Target Start/End: Original strand, 53810817 - 53811008
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    |||| |||||| |||| ||||| |||||||| || |||||||||||  |||| | ||| |||   | ||||| ||| |||||||||| ||||||||||||    
T  53810817 agccagccctagttttctagtgggagaaactccagcttctctctaaactttcttcctccttcgttcatcgaggaggggtggttttaggtcattttttgac 53810916  T
Q  399 ctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| ||||| |||||| |||| |||| ||| |||||||||||| |||||||||||||| ||||| ||||||||  || |||||||| |||||    
T  53810917 ctataatcacccctctacatctttttcccccttttctttcaatttaaataagtgattttcacatctatcaagttattccttttgtgtttttt 53811008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 311 - 495
Target Start/End: Complemental strand, 42032835 - 42032648
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatttttt-gacctaaaatcatc 409  Q
    ||||||||||||||||||   | ||||||||||||||||| |||| |||||| | ||||  |||||||||||||| | ||||||| || ||| ||||| |    
T  42032835 ttttttagtgagagaaaccctaccttctctctaagttttctttct-tttcactcatcgaagaggagtggttttaggttatttttttgatctagaatcacc 42032737  T
Q  410 cctctgcatcctttttcccttttctttcaatctaaataagtgatt---tccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
     |||| |||| ||| |||| ||||||||| |||||||||| ||||   |||| ||||||||||| |||||||||||| |||||||||||    
T  42032736 tctcttcatcttttatcccctttctttcattctaaataagcgattatttccatatatatcaagtcttttcttttgtgttttttcgtgat 42032648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 310 - 482
Target Start/End: Complemental strand, 26091222 - 26091050
Alignment:
Q  310 attttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatc 409  Q
    |||||||||||||||||||| ||||||||||||||   ||| ||||| ||||  | ||||| | ||||| |||||| | ||||||||||||| ||||| |    
T  26091222 attttttagtgagagaaactccaacttctctctaaaccttctttctccttcattcatcgaggatgagtgattttaggttattttttgacctagaatcacc 26091123  T
Q  410 cctctgcatcctttttc-ccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgt 482  Q
    |||||  ||| |||||| |||||| |||||||||||||||||| ||| |||||| ||||||| ||| |||||||    
T  26091122 cctct-aatcttttttctccttttatttcaatctaaataagtggttttcacataaatcaagtttttccttttgt 26091050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 302 - 470
Target Start/End: Complemental strand, 24099388 - 24099218
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatttttt-gacct 400  Q
    |||||||| |||| |||||| |||||||| || ||||||||||  |||| ||||  | |   | ||||| ||  |||||||||| ||||||||| |||||    
T  24099388 cggccctagttttctagtgaaagaaactttaaattctctctaaactttctttcttctacgttcatcgaggagaggtggttttaggtcatttttttgacct 24099289  T
Q  401 aaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    | |||||||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  24099288 agaatcatccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatcaagt 24099218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 308 - 465
Target Start/End: Original strand, 28857180 - 28857334
Alignment:
Q  308 taattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatca 407  Q
    ||||||||||| || |||||||  ||||||||||||||||||| ||| ||||||| |  |||| ||| ||  |||||  | ||||||||||||| |||||    
T  28857180 taattttttagggacagaaactcaaacttctctctaagttttctttcactttcactctgcgaggaggggt--ttttatgt-attttttgacctataatca 28857276  T
Q  408 tccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatat 465  Q
     || |||| |||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  28857277 cccatctgtatcctttttctctttcctttcaatccaaataagtgatttccacatatat 28857334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 489
Target Start/End: Original strand, 45418319 - 45418506
Alignment:
Q  300 gccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacc 399  Q
    |||||||||| |||| ||| |||| ||||||||||||||||||||   ||  ||||| | ||  | |||||   |||||||||||| |||||||||||||    
T  45418319 gccggccctagttttctagcgagaaaaacttcaacttctctctaaaaattttttctcctccattcatcgag---gagtggttttaggtcattttttgacc 45418415  T
Q  400 taaaatcatccctctgcatc-ctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    || |||||||||||| || | ||||| | ||||||| ||||| |||||||| | ||| |||||||||||||| ||| |||||||| |||||    
T  45418416 tagaatcatccctctacacctcttttcctcttttctctcaatataaataagaggttttcacatatatcaagtttttccttttgtgtttttt 45418506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 330 - 489
Target Start/End: Original strand, 18048711 - 18048860
Alignment:
Q  330 tcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatttttt-gacctaaaatcatccctctgcatcctttttccc 428  Q
    ||||||||||| ||||||||| ||||||||| | |||||||   |||||||||||| | ||||||| |||||| ||||| ||||  ||||| ||||||||    
T  18048711 tcaacttctctttaagttttctttctctttcgctcgtcgag---gagtggttttaggttatttttttgacctagaatcacccct--gcatcttttttccc 18048805  T
Q  429 ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
     || |||||||| ||||||||||||||||||||     |||||||||||||||||||||||    
T  18048806 ctt-ctttcaatttaaataagtgatttccacat-----aagtgttttcttttgtgcttttt 18048860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 376 - 495
Target Start/End: Original strand, 36161580 - 36161694
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    |||||||||| ||||||||||||||| ||||| || |||||||  |||||||| ||||||||||||||||||||||||||  |||||||||||   ||||    
T  36161580 gtggttttaggtcattttttgacctagaatcacccatctgcat--tttttcccatttctttcaatctaaataagtgatttttacatatatcaa---tttt 36161674  T
Q  476 cttttgtgctttttcgtgat 495  Q
     ||||||| ||||| |||||    
T  36161675 tttttgtgtttttttgtgat 36161694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 376 - 480
Target Start/End: Original strand, 32766380 - 32766485
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttt 474  Q
    |||||||||| ||||||||||||||| ||||| |||||| |||| ||||| ||||||||||||||||||| |||||| ||| ||||| |||||||| |||    
T  32766380 gtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaagtaagtgtttttcacatctatcaagttttt 32766479  T
Q  475 tctttt 480  Q
     |||||    
T  32766480 cctttt 32766485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 464
Target Start/End: Original strand, 9178152 - 9178312
Alignment:
Q  305 ccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaa 404  Q
    ||||| |||| | |||||||||||||||  ||||||||||  |||| ||||| ||||  | || || ||| ||||| |||| ||||||||||||||| ||    
T  9178152 ccctagttttctggtgagagaaacttcagtttctctctaaaatttctttctccttcattcatcaaggaggggtggtcttaggtcattttttgacctagaa 9178251  T
Q  405 tcatccctctgcatcctttt-tcccttttctttcaatctaaataagtgatttccacatata 464  Q
    ||| || ||| |||| |||| |||||||||||||||||||||||| || ||| ||||||||    
T  9178252 tcacccttctacatctttttctcccttttctttcaatctaaataaatggttttcacatata 9178312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 479
Target Start/End: Original strand, 43510010 - 43510169
Alignment:
Q  321 agagaaacttcaacttctctctaagttttcgttctctttcacccgtcga-gaaggagtggttttagatcattttttgacctaaaatcatccctctgcatc 419  Q
    |||||||||||||||||||| |||  |||| ||||| |||   | |||| ||||| |||||||||| ||||||||||||||| |||||  ||||| ||||    
T  43510010 agagaaacttcaacttctctttaaactttcattctccttcgttcatcgaagaagg-gtggttttaggtcattttttgacctagaatcactcctctacatc 43510108  T
Q  420 ctttt-tcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
     |||| |||||||||||||||||||||||||||  || ||||| |||||||| ||| ||||    
T  43510109 tttttttcccttttctttcaatctaaataagtggctttcacatttatcaagtttttccttt 43510169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 483
Target Start/End: Original strand, 5119130 - 5119313
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttg-acct 400  Q
    |||||||| |||| |||||||| ||| |||||||||| |||||  |||  ||||| ||||  | || || ||| |||||||||  |||||||||  ||||    
T  5119130 cggccctagttttctagtgagataaatttcaacttctttctaaactttatttctccttcattcatcaaggaggggtggttttatgtcattttttttacct 5119229  T
Q  401 aaaatcatccctctgcatcctttttccctt-ttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    | ||||| |||||| |||| |||| ||| | ||||||||||||||||||||| ||| |||||||||||||| ||| ||||||||    
T  5119230 agaatcacccctctacatctttttccccctcttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtg 5119313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 489
Target Start/End: Complemental strand, 9165344 - 9165175
Alignment:
Q  318 gtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcat-tttttgacctaaaatcatccctctgc 416  Q
    |||||||||||| ||||||||||||||  |||| || ||  |||  | ||||| ||  |||||||||| |||| ||||| ||||| ||||| |||||| |    
T  9165344 gtgagagaaactccaacttctctctaaactttctttttccatcattcatcgaggagaggtggttttaggtcatattttttacctagaatcacccctctac 9165245  T
Q  417 atcctttt-tcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| |||| |||||| |||||||||||||||||||| ||| |||||||   ||||| |||||||||||||||||    
T  9165244 atctttttctcccttatctttcaatctaaataagtggttttcacatat---aagtg-tttcttttgtgcttttt 9165175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 430 - 489
Target Start/End: Original strand, 47158148 - 47158207
Alignment:
Q  430 tttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  47158148 tttctttcaatttaaataagtgatttccacatatatcaagttttttcttttgtgtttttt 47158207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 396 - 480
Target Start/End: Original strand, 9634560 - 9634645
Alignment:
Q  396 gacctaaaatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
    |||||| |||||||| |||||||| ||||| | | |||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  9634560 gacctagaatcatccatctgcatctttttttctcatttctttcgatctaaataagtgattttcacatatatcatgtgttttctttt 9634645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 311 - 489
Target Start/End: Original strand, 10496143 - 10496318
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    |||| |||||||||||||| |||||||| |||||  |||| | ||| |||   | ||||| ||| |||||||||| ||| ||||||||||| ||||| ||    
T  10496143 ttttctagtgagagaaactccaacttctttctaaactttcttactccttcgttcatcgaggaggtgtggttttaggtcaatttttgacctagaatca-cc 10496241  T
Q  411 ctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    || | |||| |||||||| |||||||| |||||||||||||| ||| ||||   ||||||| ||| |||||||| |||||    
T  10496242 ctatacatcttttttcccattttcttttaatctaaataagtggttttcaca---atcaagtttttccttttgtgattttt 10496318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 299 - 386
Target Start/End: Complemental strand, 1621805 - 1621718
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttaga 386  Q
    |||||||||||||||||||||||||||||||    ||||||||||||||||| | ||||||||| | ||||| ||| ||| |||||||    
T  1621805 agccggccctaattttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgaggaggcgtgattttaga 1621718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 376 - 475
Target Start/End: Complemental strand, 56040889 - 56040787
Alignment:
Q  376 gtggttttagatcatttttt-gacctaaaatcatccctctgcatcctttttcccttt--tctttcaatctaaataagtgatttccacatatatcaagtgt 472  Q
    |||||||||| ||||||||| |||||| ||||| |||||| |||| |||||||| ||  |||||||||||||||||||| ||| ||||| |||||||| |    
T  56040889 gtggttttaggtcatttttttgacctagaatcacccctctacatcttttttccccttcttctttcaatctaaataagtggttttcacatctatcaagttt 56040790  T
Q  473 ttt 475  Q
    |||    
T  56040789 ttt 56040787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 450
Target Start/End: Complemental strand, 21225417 - 21225344
Alignment:
Q  377 tggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagt 450  Q
    ||||||||| ||||||||||| ||||||||| | |||| |||| |||||||| ||||||||| |||||||||||    
T  21225417 tggttttaggtcattttttgatctaaaatcacctctctccatcttttttcccctttctttcattctaaataagt 21225344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 7009225 - 7009122
Alignment:
Q  366 tcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatat 465  Q
    ||||||||  ||||||||||||||  ||||| |||| ||||| | ||| | ||| ||||||||||||||||| |||| ||||| ||||||||||||| ||    
T  7009225 tcgagaagatgtggttttagatcaacttttggcctagaatcacctctccgaatcttttttcccttttctttcgatct-aataactgatttccacatacat 7009127  T
Q  466 caagt 470  Q
    |||||    
T  7009126 caagt 7009122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 377 - 470
Target Start/End: Complemental strand, 10259136 - 10259043
Alignment:
Q  377 tggttttagatcattttttgacctaaaatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    ||||||||| |||||||| |||||||||||| |||||| |||| ||||| | |||||||||| ||||||| || || ||| ||||||||||||||    
T  10259136 tggttttaggtcattttt-gacctaaaatcacccctctacatcgttttttctcttttctttcgatctaaacaaatggttttcacatatatcaagt 10259043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 478
Target Start/End: Complemental strand, 31359950 - 31359893
Alignment:
Q  421 tttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctt 478  Q
    ||||||| |||||||||||||||||||| | |||||||||| |||||||| |||||||    
T  31359950 tttttccattttctttcaatctaaataaattatttccacatttatcaagttttttctt 31359893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 468
Target Start/End: Complemental strand, 2069804 - 2069729
Alignment:
Q  392 ttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaa 468  Q
    |||||||||| |||||||| ||  |||| |||||| | ||| ||||||||||||||||||||||||||| |||||||    
T  2069804 ttttgacctataatcatcc-tcatcatcatttttctcctttttttcaatctaaataagtgatttccacacatatcaa 2069729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 429 - 489
Target Start/End: Complemental strand, 29961114 - 29961054
Alignment:
Q  429 ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||| |||||||||||||||||||||| ||||| |||||||| ||| |||||||| |||||    
T  29961114 ttttttttcaatctaaataagtgattttcacatctatcaagtttttccttttgtgtttttt 29961054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 480
Target Start/End: Original strand, 53443928 - 53444094
Alignment:
Q  312 tttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccc 411  Q
    |||||||||||| ||||||||||||||||||||  |||  |||||||||   | | ||| ||   ||||||||| ||| ||||||||||| || || |||    
T  53443928 tttttagtgagataaacttcaacttctctctaaactttttttctctttcgttcattgaggagcgttggttttaggtca-tttttgacctagaaacacccc 53444026  T
Q  412 tctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
    ||| |||  |||||  ||||| ||||||| |||||||||| ||| |||| ||||||||| |||| ||||    
T  53444027 tctacattttttttgtcttttatttcaatttaaataagtggttt-cacacatatcaagttttttgtttt 53444094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 488
Target Start/End: Complemental strand, 1621707 - 1621629
Alignment:
Q  410 cctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    |||||||||| ||||| ||| |||| ||||||||||||||||||||| |||||| ||||||| |||||||| ||| ||||    
T  1621707 cctctgcatctttttttcccctttcattcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgatttt 1621629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 21223518 - 21223447
Alignment:
Q  381 tttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtga 452  Q
    ||||| ||||||||| | |||||||||   ||||||||| |||||||| ||||||||| |||||||||||||    
T  21223518 tttaggtcattttttaatctaaaatcacatctctgcatcttttttcccctttctttcattctaaataagtga 21223447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 377 - 452
Target Start/End: Complemental strand, 21231678 - 21231603
Alignment:
Q  377 tggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtga 452  Q
    ||||||||| ||||||||||| ||||||||| | |||| |||| ||||| |  ||||||||| |||||||||||||    
T  21231678 tggttttaggtcattttttgatctaaaatcacctctctccatctttttttctctttctttcattctaaataagtga 21231603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 322 - 455
Target Start/End: Complemental strand, 35395965 - 35395839
Alignment:
Q  322 gagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcct 421  Q
    |||||||| |||||||||| ||| ||||| |||| ||||||  |||||  | | ||| |||||| |||||||||||||| |||       |||||||| |    
T  35395965 gagaaactccaacttctctttaaattttctttctttttcactagtcgatcatgggtgattttaggtcattttttgaccttaaa-------tctgcatctt 35395873  T
Q  422 ttttcccttttctttcaatctaaataagtgattt 455  Q
    ||||| ||||||||| ||| ||||||||||||||    
T  35395872 ttttctcttttcttttaatgtaaataagtgattt 35395839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 458
Target Start/End: Complemental strand, 48351495 - 48351344
Alignment:
Q  305 ccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttga--cctaa 402  Q
    |||||||||||| ||||||| |||| |||||||||| | |||| || |||| |||||| | || || ||| || ||||||| || |||||| |  ||||     
T  48351495 ccctaattttttcgtgagagcaactccaacttctctttcagttctctttct-tttcactcatcaaggaggggtagttttaggtcgtttttttaaccctag 48351397  T
Q  403 aatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttcca 458  Q
    ||||| || |||||||   ||||||| |||| ||||||| ||||||||||||||||    
T  48351396 aatcacccatctgcat---ttttcccctttcgttcaatccaaataagtgatttcca 48351344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 479
Target Start/End: Complemental strand, 37188739 - 37188694
Alignment:
Q  434 tttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||||    
T  37188739 tttcaatctaaataagtgattttcacatatatctagttttttcttt 37188694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 488
Target Start/End: Original strand, 43095518 - 43095608
Alignment:
Q  400 taaaatcatccctctgcatccttttt---cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    |||||||| |||||| |||| |||||   | |||||||||||||||||||||||| ||| |||||||||| ||| |||| | ||||||||||    
T  43095518 taaaatcacccctctacatcttttttttcctcttttctttcaatctaaataagtggttttcacatatatcgagt-ttttttgttgtgctttt 43095608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 479
Target Start/End: Original strand, 52978749 - 52978794
Alignment:
Q  434 tttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
    |||||||||||||||||||||| |||||||||||||| ||| ||||    
T  52978749 tttcaatctaaataagtgattttcacatatatcaagtttttccttt 52978794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 480
Target Start/End: Original strand, 4937750 - 4937802
Alignment:
Q  428 cttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
    |||||| ||||||||||||||||||||| || |||||| |||| |||||||||    
T  4937750 cttttcgttcaatctaaataagtgattttcatatatattaagttttttctttt 4937802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 407
Target Start/End: Complemental strand, 48257769 - 48257661
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||| ||||| |||| |||||||| ||||| |||||||||| |||  |||| ||||| |||   | ||||| ||| |||||||||  ||||||||||||    
T  48257769 agccgaccctagttttctagtgagaaaaactccaacttctctttaaactttctttctcattcgtacatcgaggaggggtggttttatgtcattttttgac 48257670  T
Q  399 ctaaaatca 407  Q
    ||| |||||    
T  48257669 ctagaatca 48257661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 343
Target Start/End: Complemental strand, 51024781 - 51024737
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctcta 343  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||    
T  51024781 agccggccctaattttccagtgagagaaactccaacttctctcta 51024737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 483
Target Start/End: Original strand, 8670358 - 8670448
Alignment:
Q  392 ttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    |||||||||| ||||| |||||| |||  |||||   |||| ||||||  |||||||||| ||| |||||||||||||| ||||||||||||    
T  8670358 ttttgacctagaatcacccctctacatt-tttttatgttttgtttcaaattaaataagtggttttcacatatatcaagttttttcttttgtg 8670448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 483
Target Start/End: Original strand, 44596563 - 44596638
Alignment:
Q  409 ccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    |||||| |||| |||||||| |||||||||||| |||||||  ||||| |||||||| ||||| |||| |||||||    
T  44596563 ccctctacatcttttttccccttttctttcaatttaaataaccgattttcacatataacaagttttttgttttgtg 44596638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 432
Target Start/End: Original strand, 13863163 - 13863221
Alignment:
Q  375 agtggttttagatcattttttgacctaaaatcatccc-tctgcatcctttttccctttt 432  Q
    ||||||||||| |||||||||||| || |||  |||| |||||||||||||||||||||    
T  13863163 agtggttttaggtcattttttgacttagaattttcccctctgcatcctttttccctttt 13863221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 308 - 362
Target Start/End: Complemental strand, 31891578 - 31891524
Alignment:
Q  308 taattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcac 362  Q
    ||||||||||||||| |||||||   ||||||||||||||||| | |||||||||    
T  31891578 taattttttagtgagtgaaactttgtcttctctctaagttttcttcctctttcac 31891524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 455
Target Start/End: Original strand, 37465425 - 37465459
Alignment:
Q  421 tttttcccttttctttcaatctaaataagtgattt 455  Q
    |||||||||||||||||||||||||||||| ||||    
T  37465425 tttttcccttttctttcaatctaaataagttattt 37465459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 479
Target Start/End: Complemental strand, 8009506 - 8009461
Alignment:
Q  434 tttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
    |||||||||||||||||||||| |||||| ||| ||| ||||||||    
T  8009506 tttcaatctaaataagtgattttcacatagatctagttttttcttt 8009461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 478
Target Start/End: Complemental strand, 38166418 - 38166373
Alignment:
Q  433 ctttcaatctaaataagtgatttccacatatatcaagtgttttctt 478  Q
    ||||| ||||||| ||||||||| ||||||||||||||||| ||||    
T  38166418 ctttcgatctaaacaagtgattttcacatatatcaagtgttgtctt 38166373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 9634482 - 9634529
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctcttt 359  Q
    |||||||||||||||| || |||||||||||||||||||| || |||||    
T  9634482 ttttttagtgagagaa-ctccaacttctctctaagttttctttatcttt 9634529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 21223746 - 21223714
Alignment:
Q  315 ttagtgagagaaacttcaacttctctctaagtt 347  Q
    |||||||||||||||||| ||||||||||||||    
T  21223746 ttagtgagagaaacttcatcttctctctaagtt 21223714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 21231864 - 21231832
Alignment:
Q  315 ttagtgagagaaacttcaacttctctctaagtt 347  Q
    |||||||||||||||||| ||||||||||||||    
T  21231864 ttagtgagagaaacttcatcttctctctaagtt 21231832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 21248481 - 21248513
Alignment:
Q  315 ttagtgagagaaacttcaacttctctctaagtt 347  Q
    |||||||||||||||||| ||||||||||||||    
T  21248481 ttagtgagagaaacttcatcttctctctaagtt 21248513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 21248672 - 21248640
Alignment:
Q  315 ttagtgagagaaacttcaacttctctctaagtt 347  Q
    |||||||||||||||||| ||||||||||||||    
T  21248672 ttagtgagagaaacttcatcttctctctaagtt 21248640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 483
Target Start/End: Complemental strand, 40066258 - 40066190
Alignment:
Q  416 catcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    |||| ||||||| ||||||||||||| |||||||||| ||| ||||||| | |||| ||| ||||||||    
T  40066258 catcttttttcctcttttctttcaatataaataagtggttttcacatattttaagtttttccttttgtg 40066190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 434 - 466
Target Start/End: Original strand, 43444335 - 43444367
Alignment:
Q  434 tttcaatctaaataagtgatttccacatatatc 466  Q
    |||||||||||||||||||||| ||||||||||    
T  43444335 tttcaatctaaataagtgattttcacatatatc 43444367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 5e-60; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 302 - 495
Target Start/End: Complemental strand, 12648241 - 12648048
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||| ||||| ||||||||||||| |||||||||| ||||||||| |||||||| || ||| ||| ||| |||||||||| |||||||||||||||    
T  12648241 cggccctagtttttaagtgagagaaactccaacttctctttaagttttctttctcttttactcgttgaggaggggtggttttaggtcattttttgaccta 12648142  T
Q  402 aaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
     ||||| |||||  |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  12648141 gaatcacccctccacatcttttttctcttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgtattttcgtgat 12648048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 298 - 475
Target Start/End: Complemental strand, 29574952 - 29574777
Alignment:
Q  298 gagccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttga 397  Q
    |||||| ||||| |||||||||||||||||||  ||||||| |  |||||||  ||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  29574952 gagccgaccctagttttttagtgagagaaactctaacttcttt--aagttttatttctctttcactcgtcgaggaggggtggttttagatcattttttga 29574855  T
Q  398 cctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    |||| ||||| |||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  29574854 cctagaatca-ccctgtgcatccttttttccattttctttcaatctaaataagtgatttccacatatatcaagtgtttt 29574777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 299 - 495
Target Start/End: Complemental strand, 43397439 - 43397244
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||| |||||||||||||| |||||||||| |||  |||| || |  |||   | ||||||||| |||||||||| ||||||||||||    
T  43397439 agccggccctagttttctagtgagagaaactccaacttctctttaaactttcttttttcttcgttcatcgagaaggggtggttttaggtcattttttgac 43397340  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||| ||||| | |||| |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||    
T  43397339 ctagaatcacctctctacatc-tttttcccttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgttttttcgtgat 43397244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 319 - 495
Target Start/End: Original strand, 24461238 - 24461412
Alignment:
Q  319 tgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcat 418  Q
    |||| |||||| |||||||||||||||||||  ||||||||||| | |  || ||| |||||||||| ||||||||||||||| |||||  |||||||||    
T  24461238 tgagtgaaactccaacttctctctaagtttttattctctttcactcattaaggaggggtggttttaggtcattttttgacctagaatcactcctctgcat 24461337  T
Q  419 cctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    || ||||| ||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||    
T  24461338 ccgttttctcttt--tttcaatctaaataagtgatttccacatatatcaagtgtttttttttgtgtttttacgtgat 24461412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 311 - 495
Target Start/End: Complemental strand, 32448929 - 32448746
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    |||||||||||||||||||  ||||||||| ||| ||||  || |||||||| | ||||| ||| |||||||||| ||||| ||||||||||||||| ||    
T  32448929 ttttttagtgagagaaactctaacttctctttaaatttttcttttctttcactcatcgaggaggggtggttttaggtcattatttgacctaaaatcaccc 32448830  T
Q  411 ctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||| |||  |||||||| ||||| ||||||| ||||| |||||    
T  32448829 ctctgcat-ctttttcccctttctttcgatctaaataagtgattttcaccaatatcaagcgttttattttgtgtttttttgtgat 32448746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 302 - 479
Target Start/End: Original strand, 14955305 - 14955482
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||| ||||||||| ||| |||||  | |||||||  |||||||| | ||||||||| | ||||| ||| ||| |||||  ||| |||||||||||    
T  14955305 cggccctagttttttagtaagataaactctatcttctcttaaagttttcttcctctttcactcatcgaggaggggtgattttaagtcaatttttgaccta 14955404  T
Q  402 aaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
     ||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  14955405 gaatcatccctctgcatcttttttcctctttctttcaatctaaataagtgatttccacatacatcaagttttttcttt 14955482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 299 - 479
Target Start/End: Complemental strand, 10237532 - 10237354
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    |||| |||||||||||||||||||||||||||   ||||||| ||||||||| | ||||||||| | ||||| ||  ||| |||||| ||| ||||||||    
T  10237532 agcccgccctaattttttagtgagagaaactttg-cttctctttaagttttcttcctctttcactcatcgagtagaggtgattttaggtcaatttttgac 10237434  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
    ||| ||||| |||||| |||| |||||||| |||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  10237433 ctagaatcacccctctacatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaagt-ttttcttt 10237354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 305 - 495
Target Start/End: Original strand, 3308724 - 3308913
Alignment:
Q  305 ccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaa 404  Q
    ||||||||||||| ||||| ||||||   |||| |||||||||||  | ||||| ||| ||||||| ||| ||| |||||| ||| ||||||||||| ||    
T  3308724 ccctaattttttactgagaaaaactttgtcttccctctaagtttttttcctcttccactcgtcgaggaggggtgattttaggtcaatttttgacctagaa 3308823  T
Q  405 tcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||| |||| |||||| |||||||| ||| |||||||||||||||||||||| |||||| ||||||| |||||||| ||| |||||||||||    
T  3308824 tcacccctttgcatcttttttcccctttatttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttcgtgat 3308913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 299 - 483
Target Start/End: Complemental strand, 11985550 - 11985366
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||| ||||| |||| || ||||||||||| ||||||||||||||  |||| ||||||||||  | ||||| ||  |||||||||  ||||||||| ||    
T  11985550 agccgtccctagttttctaatgagagaaactccaacttctctctaaactttctttctctttcattcttcgaggagtggtggttttaagtcattttttaac 11985451  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    ||| ||||| |||||| || | |||| ||||||||||||||| |||||||||| ||| |||||||||||||| ||||||||||||    
T  11985450 ctagaatcacccctctacaactttttccccttttctttcaatttaaataagtggttttcacatatatcaagttttttcttttgtg 11985366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 303 - 489
Target Start/End: Original strand, 4098886 - 4099073
Alignment:
Q  303 ggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaa 402  Q
    ||||||| |||||||||| |||||||| ||||||||||||||  |||| |||||||||   | ||||| | | |||| ||||| |||||||||||||||     
T  4098886 ggccctagttttttagtgggagaaactccaacttctctctaaactttctttctctttccttcatcgaggaagggtggctttaggtcattttttgacctag 4098985  T
Q  403 aatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||| || ||| |||| |||||||| ||||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||| |||||    
T  4098986 aatcacccatctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttt 4099073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 299 - 489
Target Start/End: Original strand, 4778532 - 4778723
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||||||||| |||||||| |||||||| |||||  |||| ||||| |||   | ||||| ||| |||||||||| ||||||||||||    
T  4778532 agccggccctagttttttagtgggagaaactccaacttctttctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgac 4778631  T
Q  399 ctaaaatcatccctctgcatc-ctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| ||||| |||||| ||||  |||||||||||||||||||| |||||||||| ||| ||||| |||||||| ||| | |||||| |||||    
T  4778632 ctagaatcacccctctacatctttttttcccttttctttcaatttaaataagtggttttcacatctatcaagtttttccctttgtgtttttt 4778723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 317 - 489
Target Start/End: Original strand, 18763265 - 18763436
Alignment:
Q  317 agtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgc 416  Q
    ||||||||||||| ||||||||||||||  |||| ||| | |||| || ||||| ||  |||||||||  ||||||||||||||| ||||| |||||| |    
T  18763265 agtgagagaaactccaacttctctctaaactttctttcaccttcatccatcgaggagaggtggttttatgtcattttttgacctagaatcacccctctac 18763364  T
Q  417 atcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| ||||||||||||||||||||||||||||||| ||| |||||  ||||||| || ||||||||| |||||    
T  18763365 atcttttttcccttttctttcaatctaaataagtggttttcacat-gatcaagttttctcttttgtgtttttt 18763436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 299 - 489
Target Start/End: Original strand, 7448027 - 7448217
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    |||| |||||| |||| ||||| |||||||| ||||||||||||||  |||| || || |||   | ||||| ||| |||||||||| |||||||||| |    
T  7448027 agccagccctagttttctagtgggagaaactccaacttctctctaaactttctttttccttcgttcatcgaggaggggtggttttaggtcattttttgtc 7448126  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| ||||| |||||| |||| |||| ||||||||||||||||||||||| || ||| ||||| |||||||| ||| |||||||| |||||    
T  7448127 ctagaatcacccctctacatctttttccccttttctttcaatctaaataaatggttttcacatctatcaagtttttccttttgtgtttttt 7448217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 305 - 489
Target Start/End: Original strand, 31788241 - 31788426
Alignment:
Q  305 ccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaa 404  Q
    |||||||||| |||||||||||||| ||||||||||||||  |||| ||||  |||   | ||||| ||  | |||||||| | ||||||||||||| ||    
T  31788241 ccctaattttctagtgagagaaactccaacttctctctaaactttctttcttcttcgttcatcgaggagaggcggttttaggtaattttttgacctagaa 31788340  T
Q  405 tcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| |||||| |||| |||||||| ||||||||||||||||||||||||||| ||||| ||||||||  || |||||||| |||||    
T  31788341 tcacccctctacatcttttttcccattttctttcaatctaaataagtgattttcacatctatcaagttgttccttttgtgtttttt 31788426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 302 - 483
Target Start/End: Original strand, 7646254 - 7646437
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||| |||| ||||| |||||||| ||||||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| |||||||||||||||    
T  7646254 cggccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgaccta 7646353  T
Q  402 aaatcatccctctgcatccttttt--cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
     ||||| |||||| |||| |||||  |||||||||||| ||||||||||||| ||| ||||| || ||||| ||| ||||||||    
T  7646354 gaatcacccctctacatctttttttccccttttctttcgatctaaataagtggttttcacatctaccaagtttttccttttgtg 7646437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 331 - 478
Target Start/End: Original strand, 37994086 - 37994232
Alignment:
Q  331 caacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttccctt 430  Q
    ||||||||||||| |||||| ||||||||||  | ||||| | | |||||||||| ||||||| ||||||| ||||| ||||||||||  | |||||| |    
T  37994086 caacttctctctaggttttctttctctttcaatcatcgaggaagggtggttttaggtcatttt-tgacctagaatcacccctctgcattttgtttcccct 37994184  T
Q  431 ttctttcaatctaaataagtgatttccacatatatcaagtgttttctt 478  Q
    ||||||| || |||||||||||||| |||||| |||||||||||||||    
T  37994185 ttctttcgatttaaataagtgattttcacatagatcaagtgttttctt 37994232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 311 - 488
Target Start/End: Original strand, 8809073 - 8809250
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    |||||||||  ||||||||  |||||||||||||  |||| ||||| ||||  ||||||| |   ||||||||||||||||||| |||||||||||| ||    
T  8809073 ttttttagtaggagaaactctaacttctctctaaactttctttctccttcatacgtcgaggacaggtggttttagatcattttt-gacctaaaatcaccc 8809171  T
Q  411 ctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    |||| |||| ||||||| |||||||||||||| |||||||||  || ||||||||| |||| ||| |||||||| ||||    
T  8809172 ctctacatcttttttcctcttttctttcaatcaaaataagtggcttgcacatatattaagtttttccttttgtgttttt 8809250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 376 - 489
Target Start/End: Complemental strand, 19062595 - 19062482
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    |||||||||| | ||||||||| ||| ||||| |||||| |||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| |||     
T  19062595 gtggttttaggttattttttgaactagaatcacccctctacatcctttttcccttttctttcaatctaaataagtggttttcacatctatcaagtttttc 19062496  T
Q  476 cttttgtgcttttt 489  Q
    ||||| || |||||    
T  19062495 cttttatgtttttt 19062482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 299 - 490
Target Start/End: Complemental strand, 27097725 - 27097535
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||| |||||  ||||||| ||||||||||||||  |||| ||||| |||   | ||||| ||| ||| |||||| ||||||||||||    
T  27097725 agccggccctagttttctagtggaagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgac 27097626  T
Q  399 ctaaaatcatccctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttc 490  Q
    ||| ||||| |||||| |||| ||||| |||||||||||  ||||||||||||||||| ||||  |||||||| ||| |||||||| ||||||    
T  27097625 ctagaatca-ccctctacatcttttttccccttttcttttgatctaaataagtgattt-cacaactatcaagtttttccttttgtgttttttc 27097535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 310 - 488
Target Start/End: Complemental strand, 9169566 - 9169388
Alignment:
Q  310 attttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatc 409  Q
    ||||| ||||| |||||||| ||||||||||||||  |||| ||||| |||     ||||| ||| |||||||||| |||||||| |||||| ||||| |    
T  9169566 attttctagtgggagaaactccaacttctctctaaactttctttctcattcgtttatcgaggaggggtggttttaggtcattttt-gacctagaatcacc 9169468  T
Q  410 cctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    ||||| |||  ||||| |||||||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||| ||||    
T  9169467 cctctacatttttttttcccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt 9169388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 29279890 - 29279700
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||| |||||||||| | |||||||||||| ||||||||||||||  |||| ||||||| ||  | ||||| | ||| | |||||| ||||||||||      
T  29279890 agccgaccctaattttcttgtgagagaaactccaacttctctctaacctttctttctctt-cattcatcgaggatgagcgattttaggtcattttttggg 29279792  T
Q  399 ctaaaatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
      ||||||   ||||| |||| ||||||| |||||||||||||||||||||||| ||| |||||||||||||| ||| |||||||| |||||    
T  29279791 taaaaatcgctcctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgtttttt 29279700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 301 - 475
Target Start/End: Original strand, 19597660 - 19597833
Alignment:
Q  301 ccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacct 400  Q
    ||||||||| ||| ||||||||||||||| |||||| |||||||||| || ||||||| ||| | || |  |||| || |||||| | || |||||||||    
T  19597660 ccggccctagtttattagtgagagaaactccaacttatctctaagttatctttctcttccactcatcaaagagga-tgattttaggttatcttttgacct 19597758  T
Q  401 aaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    | ||||| ||  ||||||| |||||| | |||||||| ||||| ||||||||||||||||||||| |||| ||||    
T  19597759 agaatcaccctcctgcatcttttttcgcatttctttcgatctacataagtgatttccacatatattaagtttttt 19597833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 314 - 488
Target Start/End: Complemental strand, 5428173 - 5427998
Alignment:
Q  314 tttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctc 413  Q
    ||||| |||||||||| |||||||||||||| ||||| ||||| |||   | ||||| ||| |||||||||| | | ||||||||||| | |||||  ||    
T  5428173 tttagagagagaaactccaacttctctctaaattttctttctccttcgttcatcgaggaggggtggttttaggttaatttttgacctagagtcatcgttc 5428074  T
Q  414 tgcatcctttttccc--ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    | |||| ||||||||  ||||||||||||||||||||||  ||| ||||| |||||||| |||||||||||| ||||    
T  5428073 tacatcttttttcccctttttctttcaatctaaataagt-tttttcacatctatcaagttttttcttttgtgttttt 5427998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 303 - 475
Target Start/End: Complemental strand, 36943440 - 36943267
Alignment:
Q  303 ggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaa 402  Q
    ||||||| |||| |||||||||||||| ||| || |||||||  |||| ||||| |||     ||||| ||| |||||||||| |||||||||||||||     
T  36943440 ggccctagttttctagtgagagaaactccaatttatctctaaactttctttctccttcgttgatcgaggaggggtggttttaggtcattttttgacctag 36943341  T
Q  403 aatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    ||||| | |||| |||| ||||||| |||||||||||||||||||||||  ||| ||||| |||||||| ||||    
T  36943340 aatcaccactctacatcttttttcctcttttctttcaatctaaataagtagttttcacatctatcaagtttttt 36943267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 311 - 479
Target Start/End: Complemental strand, 28718254 - 28718090
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||| ||||||||||||| ||||| |||| ||||||||| || ||||| || | | ||||||| |||||||||| |||||||| ||| || |||||| |    
T  28718254 tttttaagtgagagaaactccaact-ctctttaagttttctttatctttaactcattgagaaggggtggttttaggtcattttt-gacatagaatcattc 28718157  T
Q  411 ctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
     |||||||| ||||||||||| ||||| |  ||||||| ||||||||||||||| ||||||||||||||    
T  28718156 atctgcatcttttttcccttt-ctttcgacataaataactgatttccacatata-caagtgttttcttt 28718090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 376 - 469
Target Start/End: Original strand, 1415421 - 1415514
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaag 469  Q
    |||||||||| | ||||||||| ||| ||||| |||||| |||| |||||||||||||||||||| |||||||||||||| |||| ||||||||    
T  1415421 gtggttttaggttattttttgatctagaatcacccctctacatcttttttcccttttctttcaatttaaataagtgattttcacacatatcaag 1415514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 376 - 489
Target Start/End: Complemental strand, 4041837 - 4041724
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    |||||||| ||||||  ||||||||| ||||| |||||| |||  |||||||| |||||||||||||||||||||| ||| ||||| |||||||| |||     
T  4041837 gtggttttggatcatactttgacctagaatcacccctctacattttttttcccgtttctttcaatctaaataagtggttttcacatctatcaagtttttc 4041738  T
Q  476 cttttgtgcttttt 489  Q
    |||||||| |||||    
T  4041737 cttttgtgtttttt 4041724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 390 - 495
Target Start/End: Original strand, 36691745 - 36691849
Alignment:
Q  390 ttttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||||| ||||| ||||| |||||| | || ||| ||| ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||    
T  36691745 tttttttacctagaatcacccctctacttcttttctcctttttctttcaatctaaataagtggttt-cacatatatcaagttttttcttttgtgtttttt 36691843  T
Q  490 cgtgat 495  Q
    ||||||    
T  36691844 cgtgat 36691849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 299 - 470
Target Start/End: Complemental strand, 17995036 - 17994864
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    |||| |||||| ||||| | ||| |||||||||| |||||||||||  |||| ||||| |||   ||||||  ||  |||||||||| |||||||||| |    
T  17995036 agcccgccctagtttttcaatgacagaaacttcatcttctctctaaactttctttctcattcggtcgtcgaagagaggtggttttaggtcattttttgcc 17994937  T
Q  399 ctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    ||||||||| | ||||||||| |||||||  |||||||||||||| |||||||| ||| |||| | |||||||    
T  17994936 ctaaaatcacctctctgcatcttttttcctattttctttcaatcttaataagtggttttcacacaaatcaagt 17994864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 376 - 489
Target Start/End: Original strand, 38445023 - 38445136
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttccctttt-ctttcaatctaaataagtgatttccacatatatcaagtgttt 474  Q
    |||||||||| |||||||| || ||| ||||| |||||| |||| |||||||||||| |||||||| |||||||||| ||| ||||| |||||||| |||    
T  38445023 gtggttttaggtcattttt-gatctagaatcacccctctacatcttttttccctttttctttcaatataaataagtggttttcacatctatcaagttttt 38445121  T
Q  475 tcttttgtgcttttt 489  Q
    ||||||||| |||||    
T  38445122 tcttttgtgtttttt 38445136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 312 - 450
Target Start/End: Original strand, 41694407 - 41694545
Alignment:
Q  312 tttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccc 411  Q
    |||||||| |||||||||||| |||||||||||| ||||  |||| ||||| | ||||||||  || ||||||| |||||||||||  ||||||||||      
T  41694407 tttttagtaagagaaacttcaccttctctctaagctttctctctccttcactcatcgagaagatgtagttttaggtcattttttgatttaaaatcatcat 41694506  T
Q  412 tctgcatcctttttcccttttctttcaatctaaataagt 450  Q
    ||| |||| |||||||| || ||||  ||||||||||||    
T  41694507 tcttcatcttttttccccttacttttgatctaaataagt 41694545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 489
Target Start/End: Complemental strand, 30400292 - 30400167
Alignment:
Q  366 tcgagaaggagtggttttagatcattttttgacctaaaatca-tccctctgcatc-ctttttcccttttctttcaatctaaataagtgatttccacatat 463  Q
    ||||||||  |||||||||||||||||||||||||||||||| ||| ||| ||||  ||||| | |||||||| |||||||||||||| ||| |||||||    
T  30400292 tcgagaagaggtggttttagatcattttttgacctaaaatcactccatctacatcttttttttctttttcttttaatctaaataagtgtttttcacatat 30400193  T
Q  464 atcaagtgttttcttttgtgcttttt 489  Q
    |||||   ||||||| |||| |||||    
T  30400192 atcaaaatttttcttctgtgtttttt 30400167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 313 - 495
Target Start/End: Complemental strand, 6359189 - 6359001
Alignment:
Q  313 ttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacc-taaaatcatccc 411  Q
    ||||||||||||||| |||| ||||| ||||||||  | ||||||||||| | |||||  |  |||||||||| ||||||||| |   ||||||||        
T  6359189 ttttagtgagagaaatttcaccttctttctaagttcgctttctctttcactcatcgaggtgaggtggttttaggtcatttttttaagataaaatcactta 6359090  T
Q  412 tctgcatccttttt-----cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    |||||||| |||||     ||| ||||||||||| |||||||||| |||| ||||||||||||| ||||| |||||| |||||||||||    
T  6359089 tctgcatcttttttttcttcccatttctttcaatttaaataagtgttttctacatatatcaagttttttcctttgtgttttttcgtgat 6359001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 311 - 489
Target Start/End: Complemental strand, 29174028 - 29173849
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||||||||||||| ||||| || | | ||| ||||  ||||| ||||| | |||| || |  ||||||||| |  ||||||||||||||||| |||    
T  29174028 ttttttagtgagagaaatttcaatttttttttaaattttttttctccttcactcatcgacaaaggatggttttaggt--ttttttgacctaaaatcgtcc 29173931  T
Q  411 ctctgcatccttttt---cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||| |||| |||||   |||||||||||||||| ||||||||| ||| ||||||| ||| || ||| |||||||| |||||    
T  29173930 ctctacatctttttttttcccttttctttcaatccaaataagtggttttcacatatttcaggtttttccttttgtgtttttt 29173849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 495
Target Start/End: Original strand, 6436402 - 6436583
Alignment:
Q  314 tttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctc 413  Q
    |||| |||||||||||| | ||||||||||||||  | |||| |||||  | |  |  ||| ||| |||||| |||||||||||| || ||||| |||||    
T  6436402 tttaatgagagaaactttagcttctctctaagttgcccttctttttcaatcattaaagaggggtgattttaggtcattttttgacatagaatcacccctc 6436501  T
Q  414 tgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    |||| | ||||||| | |||||||| ||||||||||||||||| |||| |||| |||| |||||||||   ||||||||||||    
T  6436502 tgca-catttttcctcatttctttcgatctaaataagtgattttcacacatataaagttttttctttttatctttttcgtgat 6436583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 461
Target Start/End: Complemental strand, 7678181 - 7678029
Alignment:
Q  316 tagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctg 415  Q
    |||||||||||||| ||||||||||||||  |||| ||||| |||     ||||  ||| |||||||||| ||||||||||||||| ||||| ||||||     
T  7678181 tagtgagagaaactccaacttctctctaaactttctttctccttcgttgatcgatgaggggtggttttaggtcattttttgacctagaatcacccctcta 7678082  T
Q  416 catcctttt-------tcccttttctttcaatctaaataagtgatttccacat 461  Q
    |||| ||||       ||||||||||||||||||||||||||| ||| |||||    
T  7678081 catctttttttttttctcccttttctttcaatctaaataagtggttttcacat 7678029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 311 - 468
Target Start/End: Original strand, 1421462 - 1421624
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatttttt-gacctaaaatcatc 409  Q
    |||| |||||||||||||| ||||||||| ||||  |||| ||||| |||   | ||||| ||| |||||||||| ||||||||| ||  || ||||| |    
T  1421462 ttttctagtgagagaaactccaacttctcgctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgatatagaatcacc 1421561  T
Q  410 cctctgcatccttttt----cccttttctttcaatctaaataagtgatttccacatatatcaa 468  Q
    ||||| |||| |||||    |||||||||||||||||||||||||| ||| ||||| ||||||    
T  1421562 cctctacatcttttttttcccccttttctttcaatctaaataagtggttttcacatctatcaa 1421624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 311 - 475
Target Start/End: Original strand, 37416493 - 37416657
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||| |||||||||||||||||||||||||| ||||  || |||||||  ||||||  ||| ||| |||||| ||| |||||| |||| ||||||||    
T  37416493 ttttttaatgagagaaacttcaacttctctctaaattttttttatctttcattcgtcgatgaggggtgattttaggtca-tttttgtcctagaatcatcc 37416591  T
Q  411 ctctgcat-cctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
     |||||||   |||||| | |||||||  |||||||||| |||||| | |||||| ||||| ||||    
T  37416592 ttctgcatatttttttctcgtttctttgtatctaaataaatgattttcgcatataccaagtttttt 37416657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 376 - 466
Target Start/End: Original strand, 11833340 - 11833431
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatc 466  Q
    |||||||||| |||||||||||| ||||||||| ||| | |||| ||||| | ||||||||||||| |||||||||| ||| ||||||||||    
T  11833340 gtggttttaggtcattttttgacttaaaatcattcctttacatctttttttctcttttctttcaatttaaataagtggttttcacatatatc 11833431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 475
Target Start/End: Original strand, 35220110 - 35220282
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||| |||||||||||||| |||| |||||||||  |||| ||||| ||||  | |||   ||| |||||||||| | ||||||||||    
T  35220110 agccggccctagttttctagtgagagaaactccaacctctctctaaactttctttctccttcattcatcg---aggggtggttttaggttattttttgac 35220206  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    ||| ||||| |||||| ||| ||||| |||   | ||  |||||||||||||| ||| |||||| ||||||| ||||    
T  35220207 ctagaatcacccctctccat-cttttcccccccttttcaaatctaaataagtggttttcacataaatcaagtttttt 35220282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 483
Target Start/End: Complemental strand, 37876851 - 37876733
Alignment:
Q  366 tcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttccctttt-ctttcaatctaaataagtgatttccacatata 464  Q
    ||||| ||| |||||||||| ||| ||||||||||| ||||| || | | |||| |||| ||||||| |||| |||||||||||||| ||| ||||| ||    
T  37876851 tcgaggaggggtggttttaggtcaatttttgacctagaatcacccttgtacatctttttcccctttttcttttaatctaaataagtggttttcacatcta 37876752  T
Q  465 tcaagtgttttcttttgtg 483  Q
    |||| | ||||||||||||    
T  37876751 tcaaattttttcttttgtg 37876733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 428 - 489
Target Start/End: Complemental strand, 4904336 - 4904275
Alignment:
Q  428 cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||| |||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||    
T  4904336 cttttttttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgtttttt 4904275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 424
Target Start/End: Complemental strand, 12677616 - 12677491
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||| |||||||||||||| ||||||||||||||  |||| ||||| ||    | ||||| ||| || |||| || ||||||||||||    
T  12677616 agccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtagtttaaggtcattttttgac 12677517  T
Q  399 ctaaaatcatccctctgcatcctttt 424  Q
    ||| ||||| |||||| |||| ||||    
T  12677516 ctagaatcacccctctacatcttttt 12677491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 468
Target Start/End: Complemental strand, 18108020 - 18107888
Alignment:
Q  335 ttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttct 434  Q
    |||||||||||||||| ||||||||||  | | ||| |   |||||||||| ||||||||||||||| ||||| | || ||||| ||||| ||| |||||    
T  18108020 ttctctctaagttttctttctctttcattcattgaggaatggtggttttaggtcattttttgacctagaatcacctctttgcat-cttttacccctttct 18107922  T
Q  435 ttcaatctaaataagtgatttccacatatatcaa 468  Q
    |||||  |||||||||| ||| |||| |||||||    
T  18107921 ttcaaattaaataagtggttttcacacatatcaa 18107888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 19596065 - 19596013
Alignment:
Q  430 tttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgt 482  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||    
T  19596065 tttctttcaatgtaaataagtgattttcacatatatcaagtgttttattttgt 19596013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 428 - 488
Target Start/End: Complemental strand, 31128970 - 31128910
Alignment:
Q  428 cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||| |||||||| ||||    
T  31128970 cttttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgttttt 31128910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 376 - 462
Target Start/End: Original strand, 30420555 - 30420639
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacata 462  Q
    |||||||| ||||| |||||||||| |||||| |||||| |||| |||||| ||||  |||||||||||||||||||||| ||||||    
T  30420555 gtggttttggatcaatttttgacctgaaatcacccctcttcatc-tttttctcttta-tttcaatctaaataagtgattttcacata 30420639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 432
Target Start/End: Original strand, 17149958 - 17150079
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||| |||||||||||||| ||||||||||||||||  ||||| ||||  | ||||||||   |  |||||  ||||||||||||||| ||||| |     
T  17149958 ttttttaatgagagaaacttcaccttctctctaagttttatttctccttcattcatcgagaagagattattttaattcattttttgacctagaatcacca 17150057  T
Q  411 ctctgcatcctttttccctttt 432  Q
     |||||||  ||||||||||||    
T  17150058 atctgcatattttttccctttt 17150079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 401 - 495
Target Start/End: Complemental strand, 23933839 - 23933747
Alignment:
Q  401 aaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||||||| | |||| |||| ||||| || ||| ||||||||||||||||||| || |||||||||||| | |||||  ||||| |||||||||||    
T  23933839 aaaatcacctctctacatctttttttccctttatttcaatctaaataagtgactttcacatatatcaatttttttc--ttgtgttttttcgtgat 23933747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 421 - 480
Target Start/End: Original strand, 33923603 - 33923662
Alignment:
Q  421 tttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
    |||||||||||||||||||| |||||||||| ||| |||| |||| |||| |||||||||    
T  33923603 tttttcccttttctttcaatttaaataagtggttttcacacatattaagttttttctttt 33923662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 495
Target Start/End: Original strand, 14423224 - 14423297
Alignment:
Q  421 tttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    |||||| | ||||||||||||||||||||||  ||||||||||||||||| ||||||| |||  |||||| ||||    
T  14423224 tttttctcatttctttcaatctaaataagtgggttccacatatatcaagt-ttttcttgtgttttttttcttgat 14423297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 470
Target Start/End: Complemental strand, 28227876 - 28227834
Alignment:
Q  428 cttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    |||||||||||||||||||||||||||| |||| |||||||||    
T  28227876 cttttctttcaatctaaataagtgattttcacaaatatcaagt 28227834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 478
Target Start/End: Original strand, 42714639 - 42714697
Alignment:
Q  420 ctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctt 478  Q
    ||||||| | |||||||| |||||||||||||||||  ||||||||||||| |||||||    
T  42714639 ctttttctcatttctttcgatctaaataagtgatttttacatatatcaagttttttctt 42714697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 376 - 465
Target Start/End: Original strand, 4192717 - 4192804
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatat 465  Q
    |||||||| ||||| |||||||||| | |||| |||||| |||| |||||| || |  |||||||||||||||||||||| |||||||||    
T  4192717 gtggttttggatcaatttttgacctgagatcacccctcttcatc-tttttctctata-tttcaatctaaataagtgattttcacatatat 4192804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 430 - 483
Target Start/End: Original strand, 16261274 - 16261327
Alignment:
Q  430 tttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    |||||||||||||||||||||| ||||||||||| | |||| | ||||||||||    
T  16261274 tttctttcaatctaaataagtggtttccacatatttaaagtttattcttttgtg 16261327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 307 - 344
Target Start/End: Complemental strand, 42698987 - 42698950
Alignment:
Q  307 ctaattttttagtgagagaaacttcaacttctctctaa 344  Q
    |||||||||||||||||||||||||||||||| |||||    
T  42698987 ctaattttttagtgagagaaacttcaacttctttctaa 42698950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 450
Target Start/End: Original strand, 14423147 - 14423223
Alignment:
Q  374 gagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagt 450  Q
    |||||||||||| ||| ||||||||||| |||||  | |||||||| || ||||| |||  ||||||||||||||||    
T  14423147 gagtggttttaggtcaatttttgacctagaatcactcgtctgcatctttcttcccatttacttcaatctaaataagt 14423223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 460
Target Start/End: Complemental strand, 19029221 - 19029066
Alignment:
Q  304 gccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaa 403  Q
    |||||| |||| |||||| |||||||  || ||||||||||| |||  |||||||||   | ||||  | | |||||||| |||||||||| |||||| |    
T  19029221 gccctagttttatagtgacagaaactctaatttctctctaagctttttttctctttcgttcatcgaagatgggtggttttggatcattttt-gacctaga 19029123  T
Q  404 atcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccaca 460  Q
    |||| || ||| |||| |||| ||| ||  |||| ||||||||||||||||| ||||    
T  19029122 atcacccatctccatctttttaccccttcttttcgatctaaataagtgattttcaca 19029066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 347
Target Start/End: Complemental strand, 23933911 - 23933863
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagtt 347  Q
    |||||| ||||||||||||||||||| |||| || ||||||||||||||    
T  23933911 agccggtcctaattttttagtgagagtaactccaccttctctctaagtt 23933863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 462
Target Start/End: Complemental strand, 8971831 - 8971745
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttccct-tttctttcaatctaaataagtgatttccacata 462  Q
    |||||||| | ||| || ||||||| ||||||||||||| |||| |||||| || ||| ||| |||||||||||||||||| ||||||    
T  8971831 gtggttttgggtcaattcttgacctgaaatcatccctcttcatc-tttttctctctttattttaatctaaataagtgattttcacata 8971745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 462
Target Start/End: Original strand, 3725059 - 3725143
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacata 462  Q
    |||||||| | ||| |||||||||||||||||| ||||| ||| ||||||| | | | ||||||| |||||||||||||| ||||||    
T  3725059 gtggttttgggtcaatttttgacctaaaatcattcctcttcat-ctttttctc-tctatttcaatataaataagtgattttcacata 3725143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 4264333 - 4264442
Alignment:
Q  380 ttttagatcattttttgacctaaaatca-tccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctt 478  Q
    |||||| ||||||||| || || ||||| ||  |||| || |||||||||||| |||| ||| |||||||||| ||| |||||||||||||| |||  ||    
T  4264333 ttttaggtcattttttaacttagaatcactctttctgtatactttttcccttt-cttttaatttaaataagtggttttcacatatatcaagtttttcatt 4264431  T
Q  479 ttgtgcttttt 489  Q
    ||||| |||||    
T  4264432 ttgtgtttttt 4264442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 488
Target Start/End: Complemental strand, 28871951 - 28871893
Alignment:
Q  430 tttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    ||||||||||| |||||||||||||| |||| ||||||||| |||  ||||||| ||||    
T  28871951 tttctttcaatttaaataagtgattttcacacatatcaagtttttcattttgtgttttt 28871893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 4904444 - 4904395
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttc 360  Q
    ||||||||| ||||||||||||||||||||||||  |||| ||||| |||    
T  4904444 ttttttagtaagagaaacttcaacttctctctaaactttctttctcattc 4904395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 344
Target Start/End: Complemental strand, 31129056 - 31129023
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaa 344  Q
    ||||||||||||| ||||||||||||||||||||    
T  31129056 ttttttagtgagaaaaacttcaacttctctctaa 31129023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 483
Target Start/End: Original strand, 34598922 - 34598971
Alignment:
Q  434 tttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    |||||||||||||||||||||| |||||| ||| ||| |||| |||||||    
T  34598922 tttcaatctaaataagtgattttcacatagatctagtttttttttttgtg 34598971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 492
Target Start/End: Original strand, 11812627 - 11812679
Alignment:
Q  440 tctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgt 492  Q
    |||||||||||| ||| ||||| |||||| | |||||||||||| ||||||||    
T  11812627 tctaaataagtggttttcacatgtatcaatttttttcttttgtgttttttcgt 11812679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 462
Target Start/End: Complemental strand, 27249336 - 27249270
Alignment:
Q  394 ttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacata 462  Q
    ||||||| |||||| |||||| |||| |||||| ||||  |||||||||||||||||||||| ||||||    
T  27249336 ttgacctgaaatcacccctcttcatc-tttttctcttta-tttcaatctaaataagtgattttcacata 27249270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 462
Target Start/End: Original strand, 42949618 - 42949677
Alignment:
Q  402 aaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacata 462  Q
    |||||| |||||| |||| |||||| ||||  |||||||||||||||||||||| ||||||    
T  42949618 aaatcacccctcttcatcttttttctcttta-tttcaatctaaataagtgattttcacata 42949677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 302 - 495
Target Start/End: Original strand, 8980971 - 8981154
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    ||||| || ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| ||| |||||||||| |||||||||||||||    
T  8980971 cggccgtagttttttagtgagagaaactccaacttctctctaagttttcgttctcattcactcgtcgaggaggggtggttttaggtcattttttgaccta 8981070  T
Q  402 aaatcatccctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    |||||| |||| |||||||||||| ||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||    
T  8981071 aaatcacccctatgcatcctttttccccttttctttcaatctaaataagtgattt-----------aagtgttttcttttgtgctttttcgtgat 8981154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 1239722 - 1239531
Alignment:
Q  299 agccggccctaatttttta-gtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttga 397  Q
    |||||||| || ||||||| ||||||||||||||||||||||||||||||||| ||||||| | | | ||||| ||| |||||||||| || || |||||    
T  1239722 agccggccttagttttttaagtgagagaaacttcaacttctctctaagttttccttctcttccgctcatcgaggaggggtggttttaggtccttctttga 1239623  T
Q  398 cctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||||||||| ||||||||||| |||||||| |||| ||| ||||||||||||||||| |||| |||||| ||||||||||||||| |||||    
T  1239622 cctaaaatcacccctctgcatcttttttcccctttcgttcgatctaaataagtgattttcacaaatatcaggtgttttcttttgtgtttttt 1239531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 312 - 489
Target Start/End: Original strand, 15344090 - 15344267
Alignment:
Q  312 tttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccc 411  Q
    |||||||||||||||||| |||||||||||||||||||  ||||||||||| | ||||| ||| |||||||||| ||||| ||||||||||||| | |||    
T  15344090 tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc 15344189  T
Q  412 tctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||||||| |||||||| ||| | |  ||||||||||||||||| |||| |||||||| ||||||||||||| |||||    
T  15344190 tctgcatcttttttcccctttatatggatctaaataagtgattttcacaaatatcaagcgttttcttttgtgattttt 15344267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 312 - 489
Target Start/End: Original strand, 15433155 - 15433332
Alignment:
Q  312 tttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccc 411  Q
    |||||||||||||||||| |||||||||||||||||||  ||||||||||| | ||||| ||| |||||||||| ||||| ||||||||||||| | |||    
T  15433155 tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc 15433254  T
Q  412 tctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||||||| |||||||| ||| | |  ||||||||||||||||| |||| |||||||| ||||||||||||| |||||    
T  15433255 tctgcatcttttttcccctttatatggatctaaataagtgattttcacaaatatcaagcgttttcttttgtgattttt 15433332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 312 - 489
Target Start/End: Original strand, 15524459 - 15524636
Alignment:
Q  312 tttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccc 411  Q
    |||||||||||||||||| |||||||||||||||||||  ||||||||||| | ||||| ||| |||||||||| ||||| ||||||||||||| | |||    
T  15524459 tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc 15524558  T
Q  412 tctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||||||| |||||||| ||| | |  ||||||||||||||||| |||| |||||||| ||||||||||||| |||||    
T  15524559 tctgcatcttttttcccctttatatggatctaaataagtgattttcacaaatatcaagcgttttcttttgtgattttt 15524636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 310 - 480
Target Start/End: Complemental strand, 24099567 - 24099399
Alignment:
Q  310 attttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatc 409  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||  | ||||| ||| |||| ||||| |||||||| |||||| ||||| |    
T  24099567 attttttagtgagagaaacttcaacttctctctaggttttctttctctttcaatcatcgagtagg-gtggctttaggtcattttt-gacctagaatcacc 24099470  T
Q  410 cctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
    |||||||||  | |||||  |||||||| || ||||||||||||||||||||| |||||||||||||||||    
T  24099469 cctctgcattttgtttcctctttctttcgatttaaataagtgatttccacatagatcaagtgttttctttt 24099399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 306 - 495
Target Start/End: Complemental strand, 18891015 - 18890828
Alignment:
Q  306 cctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaat 405  Q
    |||||||||||||||||||||||||   ||||| | ||||||||| | |||||||||   ||||||||| ||| |||||| ||| ||||||||||| |||    
T  18891015 cctaattttttagtgagagaaactttt-cttctttttaagttttcttcctctttcacttatcgagaaggggtgattttaggtcaatttttgacctagaat 18890917  T
Q  406 catccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||  | |||||||| |||||||| |||||||||||||||||||||||||| |||||  ||||||| |||||||||||| |||||||||||    
T  18890916 cactcatctgcatcttttttcccctttctttcaatctaaataagtgattttcacatgcatcaagt-ttttcttttgtgttttttcgtgat 18890828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 1237012 - 1236865
Alignment:
Q  299 agccggccctaatttttt-agtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttga 397  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||| | | | ||| ||| |||||||||| ||||| |||||    
T  1237012 agccggccctagtttttttagtgagagaaacttcaacttctctctaagttttccttctctttcgctcattgaggaggggtggttttaggtcattctttga 1236913  T
Q  398 cctaaaatcatccctctgcatcctttttcccttttctttcaatctaaa 445  Q
    |||||||| ||||||||||||| |||||||| |||| ||| |||||||    
T  1236912 cctaaaataatccctctgcatcttttttcccctttcgttcgatctaaa 1236865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 302 - 475
Target Start/End: Complemental strand, 31013886 - 31013712
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||| |||| |||||||||||||| ||||||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| |||||||||||||||    
T  31013886 cggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgaccta 31013787  T
Q  402 aaatcatccctctgcatcctttt-tcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
     ||||| |||||| |||| ||||  |||||||||||||||||||||||||| ||| ||||| |||| ||| ||||    
T  31013786 gaatcacccctctacatctttttcccccttttctttcaatctaaataagtggttttcacatctatctagtttttt 31013712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 313 - 489
Target Start/End: Complemental strand, 7883544 - 7883368
Alignment:
Q  313 ttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccct 412  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||| |||   | ||||  | |||||||||||| ||| ||||||| ||| ||||| ||||    
T  7883544 ttttagtgagagaaacttcaacttctttctaaattttctttctcattcgttcatcgatgatgagtggttttaggtca-tttttgatctataatcacccct 7883446  T
Q  413 ctgcatcctttttcc--cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    || |||| |||||||  |||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||| |||||    
T  7883445 ctacatcttttttccctcttttctttcaatctaaataagtggttttcacatctatcaagt-ttttcttttgtgtttttt 7883368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 319 - 483
Target Start/End: Original strand, 37971086 - 37971248
Alignment:
Q  319 tgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcat 418  Q
    ||||||||||| |||||||||||||| ||||| ||||  ||||  | |||||   |||||||||||| ||||||||||||||| ||||| |||||| |||    
T  37971086 tgagagaaactccaacttctctctaaattttctttcttcttcattcatcgag---gagtggttttaggtcattttttgacctagaatcacccctctacat 37971182  T
Q  419 ccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    | ||||| |||||||||||||||||||||||||||||| ||||| || |||||  || ||||||||    
T  37971183 cttttttccccttttctttcaatctaaataagtgattttcacatctaccaagttgttccttttgtg 37971248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 301 - 488
Target Start/End: Complemental strand, 27110780 - 27110592
Alignment:
Q  301 ccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacct 400  Q
    ||||| ||| |||| |||||||||||||| ||||||||||||||  |||| ||||| ||||  | ||||  | | |||||||||| ||||||||||| ||    
T  27110780 ccggcgctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggtggttttaggtcattttttgatct 27110681  T
Q  401 aaaatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    |||||||  | ||| |||| ||||| | |||||||||||||||||||||||| | | |||||||||||||| ||| |||||||| ||||    
T  27110680 aaaatcacacatctacatcttttttactcttttctttcaatctaaataagtggtcttcacatatatcaagtttttccttttgtgttttt 27110592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 311 - 470
Target Start/End: Original strand, 28897494 - 28897654
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||| |||||||||||||||||||| | |||  | |||||||  ||||  ||||||| ||| |||||||||  ||||||||||| ||||||||| ||    
T  28897494 ttttttaatgagagaaacttcaacttctttttaaactctcgttcttcttcattcgtcgaggaggggtggttttaagtcattttttgatctaaaatcaccc 28897593  T
Q  411 ctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    |||| |||| ||||||| |||||||||||||||||||||||| ||| ||  ||||||||||    
T  28897594 ctctacatcttttttcctcttttctttcaatctaaataagtggttttcatgtatatcaagt 28897654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 303 - 495
Target Start/End: Original strand, 41896285 - 41896477
Alignment:
Q  303 ggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttct----ctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||||||||||||||||||||    |||||||||||||||| | ||    ||||||| | ||||| | ||||| |||||| ||| ||||||||    
T  41896285 ggccctaattttttagtgagagaaactttgtattctctctaagttttcttccttcctctttcactcatcgaggatgagtgattttaggtcaatttttgac 41896384  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||| ||||| || | |||||  ||||||||||| ||||||||||||||||||||||| |||||  ||||||| |||||||| ||| |||||||||||    
T  41896385 ctagaatcacccatttgcat--tttttcccttt-ctttcaatctaaataagtgattttcacatccatcaagt-ttttctttcgtgttttttcgtgat 41896477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 338 - 495
Target Start/End: Original strand, 3240185 - 3240344
Alignment:
Q  338 tctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttg-acctaaaatcatccctctgcatcctttttcccttttc-tt 435  Q
    ||||||||||||| ||||||| |   ||| ||| ||| ||| |||||| |||||||||  | ||| ||||| || |||||||| |||||  | |||| ||    
T  3240185 tctctaagttttctttctcttccggtcgttgaggaggggtgattttaggtcattttttttatctagaatcacccatctgcatcttttttttcatttcctt 3240284  T
Q  436 tcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3240285 tcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgttttttcgtgat 3240344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 366 - 489
Target Start/End: Complemental strand, 20553496 - 20553373
Alignment:
Q  366 tcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatat 465  Q
    ||||| ||| ||||||||||||||||||| |||||| ||||| ||| |  |||  ||||||||||||||||||||||||||||||||||| ||||| |||    
T  20553496 tcgaggaggggtggttttagatcatttttggacctagaatcaccccacaacattttttttcccttttctttcaatctaaataagtgattttcacatctat 20553397  T
Q  466 caagtgttttcttttgtgcttttt 489  Q
     |||| ||| |||||||| |||||    
T  20553396 gaagtttttccttttgtgtttttt 20553373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 306 - 489
Target Start/End: Complemental strand, 29617768 - 29617584
Alignment:
Q  306 cctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaat 405  Q
    |||| ||||||||||||||||| |||||||||||||||| ||||  |||||||||||   ||||  ||  || ||||||| ||||||||||||||| |||    
T  29617768 cctagttttttagtgagagaaatttcaacttctctctaaattttgtttctctttcacttatcgaagagatgttgttttaggtcattttttgacctacaat 29617669  T
Q  406 catccctctgca----tcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    || || ||||||    | ||||||||  |||||||| |||||||||| |||| | |||||||||||| |||||||||||||| |||||    
T  29617668 cacccatctgcatattttctttttcc--tttctttc-atctaaataaatgatcttcacatatatcaaatgttttcttttgtgtttttt 29617584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 376 - 482
Target Start/End: Complemental strand, 20559985 - 20559880
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    ||||||||||||||||||| |||||| ||||| |||||| |||  |||| |||||||||||||||||||||||||||||| ||||| |||||||| |||     
T  20559985 gtggttttagatcatttttggacctagaatcacccctctacatt-ttttccccttttctttcaatctaaataagtgattttcacatctatcaagtttttc 20559887  T
Q  476 cttttgt 482  Q
    |||||||    
T  20559886 cttttgt 20559880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 376 - 482
Target Start/End: Complemental strand, 20571547 - 20571442
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    ||||||||||||||||||| |||||| ||||| |||||| |||  |||| |||||||||||||||||||||||||||||| ||||| |||||||| |||     
T  20571547 gtggttttagatcatttttggacctagaatcacccctctacatt-ttttccccttttctttcaatctaaataagtgattttcacatctatcaagtttttc 20571449  T
Q  476 cttttgt 482  Q
    |||||||    
T  20571448 cttttgt 20571442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 306 - 480
Target Start/End: Complemental strand, 45446122 - 45445948
Alignment:
Q  306 cctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaat 405  Q
    |||| |||| |||||||||||||| ||||||||||||||  |||| ||||| |||   | ||||| | | || ||||||  |||||||||||| || |||    
T  45446122 cctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaagggtagttttatgtcattttttgacatagaat 45446023  T
Q  406 catccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
    |||| |||| |||| |||||||||||| ||||||| ||| |||||| ||| |||| ||||||||| |||||||||    
T  45446022 catctctctacatcttttttcccttttatttcaatttaattaagtggttttcacacatatcaagttttttctttt 45445948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 314 - 488
Target Start/End: Original strand, 23230430 - 23230605
Alignment:
Q  314 tttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctc 413  Q
    ||||| |||||||||| ||||||||||||||  |||| ||||| |||   | ||||| | | ||| |||||| ||| ||||||||| ||||||| |||||    
T  23230430 tttagagagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtg-ttttaggtcaatttttgaccaaaaatcacccctc 23230528  T
Q  414 tgcatcctttttccc--ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    | |||| ||||||||  ||||||||||||||||||||||| ||| || || |||||||| |||||||||||| ||||    
T  23230529 tacatcttttttcccctttttctttcaatctaaataagtggttttcatatctatcaagttttttcttttgtgttttt 23230605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 311 - 460
Target Start/End: Complemental strand, 25191372 - 25191223
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||||||||||||||| ||||||||||||||  |||| ||||| ||    | ||||| ||  ||| |||||| ||||||||||||||| ||||| ||    
T  25191372 ttttttagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagaggtgattttaggtcattttttgacctagaatcaccc 25191273  T
Q  411 ctctgcatcctttttcccttttctttcaatctaaataagtgatttccaca 460  Q
     ||| |||| |||||||||||||||||||  |||||||||||||| ||||    
T  25191272 atctacatcttttttcccttttctttcaaattaaataagtgattttcaca 25191223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 306 - 454
Target Start/End: Original strand, 8867607 - 8867755
Alignment:
Q  306 cctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaat 405  Q
    |||| ||||||||| ||||||||| ||  |||||||||||||||| |||||||||| || ||||| | ||||| |||||  ||||||||||| ||| |||    
T  8867607 cctagttttttagttagagaaactacacattctctctaagttttctttctctttcatccatcgagtatgagtgattttaagtcattttttgatctagaat 8867706  T
Q  406 catccctctgcatcctttttcccttttctttcaatctaaataagtgatt 454  Q
    || || ||  |||| || || || |||||||||||||||||||||||||    
T  8867707 cagccatcaacatctttgtttccctttctttcaatctaaataagtgatt 8867755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 391 - 489
Target Start/End: Complemental strand, 40619298 - 40619200
Alignment:
Q  391 tttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||||||||| |||||||||||| |||  |||||| ||||||| |||||||||||||||||||| |||||||||||||| |||  ||||||| |||||    
T  40619298 tttttgacctagaatcatccctctacatattttttctcttttctatcaatctaaataagtgattttcacatatatcaagtttttctttttgtgtttttt 40619200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 318 - 489
Target Start/End: Original strand, 3673236 - 3673403
Alignment:
Q  318 gtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgca 417  Q
    |||| ||||||||||||||||||||||  |||| ||||| || |  | ||||  |||  ||||||||| ||||||| ||||||| |||||||||||| ||    
T  3673236 gtgaaagaaacttcaacttctctctaaactttctttctcctttattcatcgaagagggttggttttaggtcatttt-tgacctagaatcatccctctaca 3673334  T
Q  418 tcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    || |||  |||||||||||||||||||||||||| ||  |||||||   |||||||| ||||||| ||||||    
T  3673335 tcttttgccccttttctttcaatctaaataagtggttatcacatat---aagtgtttccttttgttcttttt 3673403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 374 - 468
Target Start/End: Complemental strand, 14545146 - 14545050
Alignment:
Q  374 gagtggttttagatcattttttgacctaaaatcatcc-ctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaa 468  Q
    |||||||||||| ||||||||||||||||||||| || |||| |||| ||||| | |||||||||||||||||||||||| ||| ||||||||||||    
T  14545146 gagtggttttaggtcattttttgacctaaaatcaccctctctacatctttttttctcttttctttcaatctaaataagtggttttcacatatatcaa 14545050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 311 - 481
Target Start/End: Complemental strand, 17693919 - 17693749
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||||||||||||||| ||||||||||||||  |||| ||||| |||   | | ||| ||| || ||||||| ||| ||||||||||| ||||||||    
T  17693919 ttttttagtgagagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggttgttttaggtca-tttttgacctagaatcatcc 17693821  T
Q  411 ctctgcatcctttttc-ccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttg 481  Q
    |||| |||| |||||| |  ||||||||||||||||||| || |||  ||| ||||||||| ||| ||||||    
T  17693820 ctctacatcttttttctcaatttctttcaatctaaataaatgttttgaacaaatatcaagtttttccttttg 17693749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 394 - 495
Target Start/End: Original strand, 14585565 - 14585666
Alignment:
Q  394 ttgacctaaaatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgt 492  Q
    |||||||| ||||| ||||||||||| ||||| | |||||||||||||||||||||||||||| |||||| ||||||| |||||||| ||| |||||| |    
T  14585565 ttgacctagaatcacccctctgcatctttttttctcttttctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttctt 14585663  T
Q  493 gat 495  Q
    |||    
T  14585664 gat 14585666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 489
Target Start/End: Complemental strand, 40211621 - 40211432
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatca-ttttttgacct 400  Q
    ||||| || |||| |||||||||||||| ||| |||||| |||  |||| ||||| |||     ||||| ||| |||| ||||| | | |||||||||||    
T  40211621 cggccttagttttctagtgagagaaactccaatttctctttaaaatttctttctccttcgttaatcgaggaggggtggctttaggtaatttttttgacct 40211522  T
Q  401 aaaatcatccctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    | ||||| |||||| |||| ||||| | |||||||||||||||||||||| | ||| ||||| |||||||| |||||||||||| |||||    
T  40211521 agaatcacccctctacatcttttttactcttttctttcaatctaaataagcggttttcacatctatcaagtattttcttttgtgtttttt 40211432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 376 - 489
Target Start/End: Complemental strand, 8443762 - 8443649
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctt--tttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtt 473  Q
    |||||||||| ||||||||| || || ||||| || |||||||| ||  |||||| |||||||| |||||||||||||||||||||||||||| || |||    
T  8443762 gtggttttaggtcattttttaacttagaatca-ccatctgcatctttcttttcccctttctttcgatctaaataagtgatttccacatatatccag-gtt 8443665  T
Q  474 ttcttttgtgcttttt 489  Q
    |||||||||| |||||    
T  8443664 ttcttttgtgtttttt 8443649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 376 - 470
Target Start/End: Original strand, 29937963 - 29938057
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttc-ccttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    ||||||||||||||||||| |||||| ||||| |||||| |||| |||||| ||||||||||||| ||||||||||| ||| || |||||||||||    
T  29937963 gtggttttagatcattttt-gacctagaatcacccctctacatcttttttcgccttttctttcaacctaaataagtggttttcatatatatcaagt 29938057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 374 - 475
Target Start/End: Complemental strand, 26469436 - 26469338
Alignment:
Q  374 gagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtt 473  Q
    ||||| |||||| ||||||||||||||| |||||||| |||| ||  ||||| |||| | |||||||||||||||||||||| |||||||||||||| ||    
T  26469436 gagtgattttaggtcattttttgacctagaatcatccatctgaat--ttttttccttct-tttcaatctaaataagtgattttcacatatatcaagtttt 26469340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 390 - 489
Target Start/End: Original strand, 6831453 - 6831551
Alignment:
Q  390 ttttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||||||| || |||||||| ||||||||||||||  | |||||||| ||  |||||||||| || |||||||||||||| |||||||||||| |||||    
T  6831453 ttttttgacttagaatcatcc-tctgcatcctttttttcctttctttcgattcaaataagtgaatttcacatatatcaagttttttcttttgtgtttttt 6831551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 451
Target Start/End: Original strand, 10377471 - 10377620
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||| |||| ||||| |||||||| ||||||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| |||||||||||||||    
T  10377471 cggccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgaccta 10377570  T
Q  402 aaatcatccctctgcatcctttt-tcccttttctttcaatctaaataagtg 451  Q
     || || |  ||| |||| ||||  ||||| ||||||||||||||||||||    
T  10377571 gaa-caccaatctacatctttttcccccttctctttcaatctaaataagtg 10377620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 434 - 492
Target Start/End: Original strand, 21237702 - 21237760
Alignment:
Q  434 tttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgt 492  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||    
T  21237702 tttcaatctaaataagtgatttccaaatatatcaagtgttttcctttgtgttatttcgt 21237760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 475
Target Start/End: Complemental strand, 33214930 - 33214773
Alignment:
Q  318 gtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatttttt-gacctaaaatcatccctctgc 416  Q
    |||||| ||||||||| ||||||||||  |||| ||||| |||   | ||||| | | |||||||||| || |||||| ||| || |||||| | ||| |    
T  33214930 gtgagacaaacttcaatttctctctaaactttctttctccttcgttcatcgaggatgggtggttttaggtcttttttttgacttagaatcattcatctac 33214831  T
Q  417 atcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    ||| |||||||||||||||||||| |||||||||||||| | ||||||| |||| ||||    
T  33214830 atc-tttttcccttttctttcaatttaaataagtgattttcgcatatattaagtttttt 33214773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 495
Target Start/End: Original strand, 8826033 - 8826176
Alignment:
Q  353 tctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccc-tctgcatcctttttccct-tttctttcaatctaaataagt 450  Q
    |||||||||| | ||||| | | |||||||||| ||||||||||| ||| ||||| ||| | || ||| ||||||||  ||| |||| ||||||||||||    
T  8826033 tctctttcactcatcgaggatgggtggttttaggtcattttttgatctagaatcaccccctttgtatcttttttccccctttatttcgatctaaataagt 8826132  T
Q  451 gatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    |||||  ||| ||||||||| |||||||||||  |||||||||||    
T  8826133 gatttttacacatatcaagttttttcttttgt-ttttttcgtgat 8826176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 472
Target Start/End: Complemental strand, 43834187 - 43834144
Alignment:
Q  429 ttttctttcaatctaaataagtgatttccacatatatcaagtgt 472  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  43834187 ttttctttcaatctaaataagtgatatccacatatatcaagtgt 43834144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 304 - 362
Target Start/End: Original strand, 39655287 - 39655345
Alignment:
Q  304 gccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcac 362  Q
    |||||||||||| |||||||||||||  | ||||||||||||||||| |||||||||||    
T  39655287 gccctaatttttcagtgagagaaactctatcttctctctaagttttctttctctttcac 39655345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 376 - 470
Target Start/End: Original strand, 5046598 - 5046692
Alignment:
Q  376 gtggttttagatcattttttg-acctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    |||||||||| |||||||||  ||||| ||||  |||| |||||| |||||||| ||||||| ||| |||||||||||||| |||| |||||||||    
T  5046598 gtggttttaggtcattttttttacctagaatcgcccctatgcatc-tttttcccctttcttttaatttaaataagtgattttcacacatatcaagt 5046692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 428 - 483
Target Start/End: Complemental strand, 24186847 - 24186792
Alignment:
Q  428 cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    ||||||||| |||||||||||||||||| || ||||||||||| ||| ||||||||    
T  24186847 cttttctttaaatctaaataagtgattttcatatatatcaagtttttgcttttgtg 24186792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 43890328 - 43890251
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgattt 455  Q
    |||||||| |||||||||||||||| |||||| |||||| ||| ||||||| | |||  |||||||||||||||||||||    
T  43890328 gtggttttggatcattttttgacctgaaatcacccctcttcat-ctttttctc-tttaattcaatctaaataagtgattt 43890251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 470
Target Start/End: Complemental strand, 7677521 - 7677427
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    |||||||||| ||||||||||||||| ||||| |||||| ||||   ||  | ||||||||| |||||||||| |  ||| ||||||||||||||    
T  7677521 gtggttttaggtcattttttgacctagaatcacccctctacatctcattcactttttctttcgatctaaataaattgttttcacatatatcaagt 7677427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 423 - 480
Target Start/End: Complemental strand, 27498557 - 27498500
Alignment:
Q  423 tttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
    ||||| |||||||||||| ||||||||||||||  ||||||||||||| ||| |||||    
T  27498557 tttccattttctttcaatttaaataagtgatttttacatatatcaagtttttcctttt 27498500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 429 - 489
Target Start/End: Complemental strand, 36948625 - 36948565
Alignment:
Q  429 ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||||||||||||||||||||| ||| || ||||||||| | ||| |||||||| |||||    
T  36948625 ttttctttcaatctaaataagtggttttcatatatatcaaatttttccttttgtgtttttt 36948565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 462
Target Start/End: Complemental strand, 9619561 - 9619477
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacata 462  Q
    |||||||| | ||| || ||||||| |||||| |||||| |||| |||||| ||||  |||||||||||||||||||||| ||||||    
T  9619561 gtggttttgggtcaattcttgacctgaaatcacccctcttcatc-tttttctcttta-tttcaatctaaataagtgattttcacata 9619477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 464
Target Start/End: Complemental strand, 20227472 - 20227438
Alignment:
Q  430 tttctttcaatctaaataagtgatttccacatata 464  Q
    |||||||||||||||||||||| ||||||||||||    
T  20227472 tttctttcaatctaaataagtggtttccacatata 20227438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 344
Target Start/End: Complemental strand, 1608284 - 1608251
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaa 344  Q
    |||||||||||||||||||| |||||||||||||    
T  1608284 ttttttagtgagagaaactttaacttctctctaa 1608251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 395
Target Start/End: Complemental strand, 8412660 - 8412571
Alignment:
Q  306 cctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatttttt 395  Q
    |||| |||| ||||||||||||||  |||||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| |||||||||    
T  8412660 cctagttttctagtgagagaaactctaacttctctctaaactttctttctcattcgttcatcgagtaggggtggttttaggtcatttttt 8412571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 344
Target Start/End: Complemental strand, 18537672 - 18537639
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaa 344  Q
    |||||||||||||||||||||||||| |||||||    
T  18537672 ttttttagtgagagaaacttcaacttttctctaa 18537639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 344
Target Start/End: Complemental strand, 41060534 - 41060498
Alignment:
Q  308 taattttttagtgagagaaacttcaacttctctctaa 344  Q
    ||||||||||||||||||||||||| | |||||||||    
T  41060534 taattttttagtgagagaaacttcatcatctctctaa 41060498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 1e-54; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 8985257 - 8985062
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagat-----catttt 393  Q
    |||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||| |||  || ||| ||| |||||| |     ||||||    
T  8985257 agccggccctagctttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtttaggaggggtgattttaggttaggtcatttt 8985158  T
Q  394 ttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaa-taagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  8985157 ttgatctaaaatca-ccctctgcatcctttttccattttctttcaatctaaaataagtgatttccacatatatcaagtgttttcttttgtgtttttt 8985062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 299 - 489
Target Start/End: Original strand, 38597566 - 38597756
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||| |||||||||||||| ||||||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| | ||||||||||    
T  38597566 agccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggttattttttgac 38597665  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| ||||| |||||| |||| ||||||||| |||||||||| |||||||||||||| ||||| |||||||| ||| ||||||||||||||    
T  38597666 ctagaatcacccctctacatcttttttccctattctttcaatttaaataagtgattttcacatctatcaagtttttccttttgtgcttttt 38597756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 302 - 495
Target Start/End: Original strand, 39567067 - 39567259
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||||||||||||||||||||||  |  ||||||| ||||||||| | ||||||||| | ||||| ||| ||| |||||| ||| |||||||||||    
T  39567067 cggccctaattttttagtgagagaaacaccgtcttctctttaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgaccta 39567166  T
Q  402 aaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
     |||||  |||||||||| |||| ||| |||||||||||||||||||||||||| |||||| ||||||| |||||||| ||| |||||||||||    
T  39567167 gaatcacgcctctgcatctttttccccctttctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttcgtgat 39567259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 331 - 495
Target Start/End: Complemental strand, 10332840 - 10332675
Alignment:
Q  331 caacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcc--c 428  Q
    |||||||||| ||||||||| ||||||||||| ||||||  ||| |||||||||  |||||||||||  || |||||  |||||||||| |||||    |    
T  10332840 caacttctctataagttttctttctctttcactcgtcgaacagg-gtggttttaagtcattttttgatttagaatcacacctctgcatcttttttttatc 10332742  T
Q  429 ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  10332741 ttttctttcaatctaaataagtgatttccatatatatcaagtgttttcttttgtgttttttcgtgat 10332675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 299 - 489
Target Start/End: Original strand, 13006997 - 13007188
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||||||||| |||||||| ||||||||||||||  |||| ||||| |||   | ||||| ||  |||||||||| ||||||||||||    
T  13006997 agccggccctagttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgac 13007096  T
Q  399 ctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| ||||| |||||| || | |||||||| ||||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||| |||||    
T  13007097 ctagaatcacccctctacaccttttttcccattttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttt 13007188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 299 - 483
Target Start/End: Original strand, 7035996 - 7036181
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||| ||||||||||||||  |||||||||||||  |||| ||||| ||||  | || ||  || |||||||||| ||||||||||||    
T  7035996 agccggccctagttttctagtgagagaaactcaaacttctctctaaactttctttctccttcattcatcaaggtggggtggttttaggtcattttttgac 7036095  T
Q  399 ctaaaatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    |||||||||  | ||| |||| ||||||| |||||||||||||||||||||||| ||| |||||||||||| | ||||||||||||    
T  7036096 ctaaaatcactcatctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatcaatttttttcttttgtg 7036181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 339 - 495
Target Start/End: Complemental strand, 2979592 - 2979437
Alignment:
Q  339 ctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttca 438  Q
    |||||||||||| | ||||||||| | ||||| ||| ||| |||||| ||| ||||||||||| ||||| ||||||||||| |||||||  |||||||||    
T  2979592 ctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctataatcacccctctgcatcttttttcctctttctttca 2979493  T
Q  439 atctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||||||||||||||||| |||||| ||||||| |||||||| ||| |||||||||||    
T  2979492 atctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttcgtgat 2979437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 302 - 489
Target Start/End: Complemental strand, 11977254 - 11977066
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttg-acct 400  Q
    |||||||| |||| ||||||||||||||  |||||||||||||  |||| ||||| |||   | ||||||||| ||||||||||||  ||||||  ||||    
T  11977254 cggccctagttttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgagaaggggtggttttagatttttttttttacct 11977155  T
Q  401 aaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    | |||||  ||||  |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||    
T  11977154 agaatcaaacctcgacatcttttttcccttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtgtttttt 11977066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 306 - 470
Target Start/End: Original strand, 14211009 - 14211170
Alignment:
Q  306 cctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaat 405  Q
    ||||||||||||||||||||||||    ||||||||||||||||| | ||||||||| | ||||| ||| ||| |||||| ||| ||||||||||| |||    
T  14211009 cctaattttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgaggagg-gtgattttaggtcaatttttgacctagaat 14211107  T
Q  406 catccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    || ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| |||||||    
T  14211108 cacccctctgcatc-tttttcccttt-ctttcaatctaaataagtgattttcacatacatcaagt 14211170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 304 - 495
Target Start/End: Complemental strand, 28541221 - 28541037
Alignment:
Q  304 gccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaa 403  Q
    |||||| |||||||||||||||||||    ||||||||||||||||| | ||||||||| | |||||  || ||| |||||| ||| ||||||||||| |    
T  28541221 gccctatttttttagtgagagaaactctttcttctctctaagttttcttcctctttcactcatcgaggtggggtgattttaggtcaatttttgacctaga 28541122  T
Q  404 atcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
          |||||||||| |||||||| |||||||||||||||||||||||||| |||||| ||||||| |||||||| ||| |||||||||||    
T  28541121 ------cctctgcatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttcgtgat 28541037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 6012458 - 6012267
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||| | |||||||||| |||||||| ||||||||||||||  |||| ||||| |||   | | ||| ||| |||||||||| ||||||||||||    
T  6012458 agccggccccagttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 6012359  T
Q  399 ctaaaatcatccctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
     || ||||| |||||| |||| ||||| |||||||||||||||||||||||||| ||| ||| | |||||||| ||| |||||||| |||||    
T  6012358 atagaatcacccctctacatctttttttcccttttctttcaatctaaataagtgtttttcacgtctatcaagtttttccttttgtgtttttt 6012267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 9114045 - 9113854
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||| ||||| |||| ||||  ||||||||  |||||||||||||  |||| |||||||||   | ||||| ||| ||| |||||| ||||||||| ||    
T  9114045 agccgaccctagttttctagtaggagaaactctaacttctctctaaactttctttctctttcgttcatcgaggaggggtgattttaggtcattttttaac 9113946  T
Q  399 ctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| ||||| |||||| |||| |||||||| |||||||| |||||||||||||| ||| ||||| |||||||| ||| |||||||| |||||    
T  9113945 ctagaatcacccctctacatcttttttcccattttcttttaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttt 9113854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 305 - 482
Target Start/End: Original strand, 15571260 - 15571438
Alignment:
Q  305 ccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatttt-ttgacctaaa 403  Q
    ||||| |||| ||||||||||||||  |||||||||| ||| |||| ||||| ||||  | ||||| || | ||||||||  ||||||| |||||||| |    
T  15571260 ccctagttttctagtgagagaaactctaacttctctccaagctttctttctccttcattcatcgaggagaaatggttttatgtcatttttttgacctaga 15571359  T
Q  404 atcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgt 482  Q
    ||||||| ||  |||| |||||| | |||||||||||||||||||||| ||| |||||||||||||| ||| |||||||    
T  15571360 atcatccatcaacatcttttttctcatttctttcaatctaaataagtggttttcacatatatcaagtttttccttttgt 15571438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 313 - 488
Target Start/End: Original strand, 34945204 - 34945380
Alignment:
Q  313 ttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcga-gaaggagtggttttagatcattttttgacctaaaatcatccc 411  Q
    |||||||| |||||||| ||| ||||||||||  |||| ||||| |||   | |||| |||||| ||||||||| ||||||||||||||| ||||| ||     
T  34945204 ttttagtgggagaaactccaaattctctctaaactttctttctccttcgttcatcgaagaagga-tggttttaggtcattttttgacctagaatcaccct 34945302  T
Q  412 tctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    ||| |||| |||||||| ||||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||| ||||    
T  34945303 tctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgttttt 34945380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 372 - 488
Target Start/End: Complemental strand, 8096743 - 8096628
Alignment:
Q  372 aggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtg 471  Q
    |||| ||||||||| |||||||| |||||| ||||| ||||||   || ||||||||||||||||||||||||||||||| ||| ||||||||||||||     
T  8096743 aggattggttttaggtcattttt-gacctagaatcacccctctatttcttttttcccttttctttcaatctaaataagtggttttcacatatatcaagtt 8096645  T
Q  472 ttttcttttgtgctttt 488  Q
    |||||||||||| ||||    
T  8096644 ttttcttttgtgttttt 8096628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 316 - 480
Target Start/End: Original strand, 38007143 - 38007306
Alignment:
Q  316 tagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctg 415  Q
    ||||||||||||||  | |||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| ||||||||||||||  ||||| ||||||     
T  38007143 tagtgagagaaactcaatcttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctcgaatcacccctcta 38007242  T
Q  416 catcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
    |||| |||||||||||||||||||| |||||||||| ||| |||| ||||||||| |||| ||||    
T  38007243 catc-tttttcccttttctttcaatttaaataagtggttttcacacatatcaagttttttgtttt 38007306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 317 - 482
Target Start/End: Complemental strand, 26878380 - 26878215
Alignment:
Q  317 agtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgc 416  Q
    ||||||||||||||||||||||||||||  |||| ||||| ||||  | ||||| ||  |||||||||  |||||||| || ||| ||||| | |||| |    
T  26878380 agtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggagaggtggttttatgtcattttt-gatctagaatcacctctctac 26878282  T
Q  417 atcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgt 482  Q
    ||| |||| ||| ||||||||||||||||||||||| ||| |||||| ||||||| |||||||||||    
T  26878281 atctttttcccccttttctttcaatctaaataagtggttttcacataaatcaagttttttcttttgt 26878215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 353 - 489
Target Start/End: Complemental strand, 8088477 - 8088342
Alignment:
Q  353 tctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtga 452  Q
    |||||||||| | | ||||||| ||| |||||||||||| |||||||| || ||| | ||||||||| |||||| |||| ||||| ||||||||||||||    
T  8088477 tctctttcactcattgagaaggggtgattttagatcattctttgacctgaagtcacctctctgcatcttttttctcttt-ctttcgatctaaataagtga 8088379  T
Q  453 tttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| |||| |||||||  ||||||||||||| |||||    
T  8088378 ttttcacaaatatcaaacgttttcttttgtgtttttt 8088342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 299 - 488
Target Start/End: Original strand, 26825197 - 26825389
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatttttt--g 396  Q
    ||||| ||||| |||| ||||| |||||||| ||| ||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| || ||||||  |    
T  26825197 agccgaccctagttttctagtgggagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttttgg 26825296  T
Q  397 acctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    ||||| ||||| | |||| |||| |||||||| ||||||||||||||||||||||| ||| ||| | |||||||| ||| |||||||| ||||    
T  26825297 acctagaatcaccactctacatcttttttccccttttctttcaatctaaataagtggttttcacgtctatcaagtttttccttttgtgttttt 26825389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 495
Target Start/End: Complemental strand, 24230107 - 24229908
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctct-aagttttcgttctctttcacccgtcgagaaggagtggtttta-gatcattttttg 396  Q
    ||||||||||| |||| |||||||||||||| |||||||||||| ||  |||| || |  |||   | ||||| ||  | ||||||| | | ||||||||    
T  24230107 agccggccctagttttctagtgagagaaactccaacttctctctaaaactttctttgttcttcgttcatcgaggagtggaggttttaggtttattttttg 24230008  T
Q  397 -acctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
     ||||||||||| |||||| |||  |||| || ||||||||||||||||||||||||||| ||||| ||||||||  ||||||||||| ||||| |||||    
T  24230007 tacctaaaatcacccctctacatatttttccctttttctttcaatctaaataagtgattttcacatctatcaagttgtttcttttgtgtttttttgtgat 24229908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 299 - 449
Target Start/End: Original strand, 41630279 - 41630421
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||| ||||| ||||    ||||  | | |||||||||| ||| ||||||||    
T  41630279 agccgaccctaatttttcagtgagagaaacttcaacttctctctaagctttctttctcattca----tcgaagatg-gtggttttaggtca-tttttgac 41630372  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataag 449  Q
    ||| ||||| | |||| ||| ||||||||| ||||||||||||||||||||    
T  41630373 ctagaatca-ctctctacat-ctttttcccatttctttcaatctaaataag 41630421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 376 - 489
Target Start/End: Original strand, 6216740 - 6216858
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttccctttt-----ctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||   ||||||| |||     ||||||||||||||||||| ||| ||||||||||||||    
T  6216740 gtggttttaggtcattctttgacctaaaatcatccatctacatttgttttcccctttgctttctttcaatctaaataagtggttttcacatatatcaagt 6216839  T
Q  471 gttttcttttgtgcttttt 489  Q
     ||| |||||||| |||||    
T  6216840 ttttccttttgtgtttttt 6216858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 403 - 495
Target Start/End: Complemental strand, 19103689 - 19103598
Alignment:
Q  403 aatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||||| ||||| ||||| |||||||| |||||||| ||||||||||||||||| |||||| ||||||| ||||||||  || |||||||||||    
T  19103689 aatcacccctcagcatcttttttcccctttctttcgatctaaataagtgattttcacatacatcaagt-ttttctttcatgttttttcgtgat 19103598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 31392010 - 31391904
Alignment:
Q  366 tcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatccttt--ttcccttttctttcaatctaaataagtgatttccacatat 463  Q
    ||||| ||| |||||||||| ||||||||||||||| ||||| |||||| |||| |||  | ||||||||  |||||||||||||||| ||| ||||| |    
T  31392010 tcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttctccccttttcgatcaatctaaataagtggttttcacattt 31391911  T
Q  464 atcaagt 470  Q
    |||||||    
T  31391910 atcaagt 31391904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 376 - 478
Target Start/End: Original strand, 10722618 - 10722722
Alignment:
Q  376 gtggttttagatcatttttt-gacctaaaatcatccc-tctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtt 473  Q
    |||||||||| ||||||||| |||||| ||||| ||| ||| |||| |||||||  |||||||||||||||||||||| ||| ||||| || ||||| ||    
T  10722618 gtggttttaggtcatttttttgacctagaatcaccccctctacatcttttttcctctttctttcaatctaaataagtgtttttcacatgtaacaagtttt 10722717  T
Q  474 ttctt 478  Q
    |||||    
T  10722718 ttctt 10722722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 489
Target Start/End: Original strand, 13421724 - 13421901
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    |||| ||||||||||||||||||||||||| |||  |||| ||||  ||||  | | ||| | || || |||||| |||||||||||| || ||||| ||    
T  13421724 ttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcattcat-gagtatgaatgattttaggtcattttttgacatagaatca-cc 13421821  T
Q  411 ctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||| |||| |||| ||| |||||||| |||||||||||||| ||| | ||||||| |||| |||  ||||||| |||||    
T  13421822 ctctacatctttttcccccttttcttttaatctaaataagtggttttcccatatataaagtttttctttttgtgattttt 13421901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 495
Target Start/End: Original strand, 41749091 - 41749287
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctcttt--cacccgtcgagaaggagtggttttagatcattttttga-- 397  Q
    |||| ||| |||||||||||||||||||  | ||||| |||||||| || ||| | ||  | | | ||||| ||| |||||||||  ||||||||| |      
T  41749091 cggctctagttttttagtgagagaaactctatcttctttctaagttctctttcccctttgctctcatcgaggaggggtggttttaagtcatttttttaaa 41749190  T
Q  398 cctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    | |||||||||  | ||||||| ||||||| ||| |||| |||||||||||||  ||| |||||||||||||| |||| ||||| |||||||| ||||    
T  41749191 cttaaaatcatttcactgcatcttttttccattt-cttttaatctaaataagttgttttcacatatatcaagttttttattttgcgctttttcatgat 41749287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 304 - 489
Target Start/End: Original strand, 25979931 - 25980117
Alignment:
Q  304 gccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaa 403  Q
    |||||| |||| ||||||| |||||| ||||||||||||||  |||| ||||| |||   | ||||| | | ||||||| || ||||||||||||||  |    
T  25979931 gccctagttttctagtgagcgaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtggtttcaggtcattttttgacctgga 25980030  T
Q  404 atcatccctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    || | || ||| |||| ||||| ||||||  |||||| ||||||||||| |||  |||| |||| ||| ||| |||||||| |||||    
T  25980031 attacccttctacatcttttttcccctttgttttcaacctaaataagtggttttaacatctatcgagtttttccttttgtggttttt 25980117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 475
Target Start/End: Original strand, 7929979 - 7930140
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    |||| |||||||||||||| ||| ||||||||||  |||| ||||| ||||    || || ||| ||| |||||| ||| ||||||||||| ||||| ||    
T  7929979 ttttctagtgagagaaactccaaattctctctaaactttctttctccttca----tcaaggaggggtgattttaggtcaatttttgacctagaatcaccc 7930074  T
Q  411 ctctgcatcctttt---tcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    || |||||| ||||   || ||||||||| |||||||  ||||| ||| |||||||||||||| ||||    
T  7930075 ctgtgcatcattttctctctcttttcttttaatctaa--aagtggttttcacatatatcaagtttttt 7930140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 482
Target Start/End: Complemental strand, 11074128 - 11074036
Alignment:
Q  391 tttttgacctaaaatcatccctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgt 482  Q
    ||||||||||| ||||||| |||| | || ||||| ||||||||||| ||||||||||||||  || ||||| |||||||| ||| |||||||    
T  11074128 tttttgacctagaatcatcactctacgtctttttttcccttttcttttaatctaaataagtggctttcacatctatcaagtttttccttttgt 11074036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 467
Target Start/End: Original strand, 4771031 - 4771077
Alignment:
Q  421 tttttcccttttctttcaatctaaataagtgatttccacatatatca 467  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||||    
T  4771031 tttttcctttttctttcaatctaaataagtggttttcacatatatca 4771077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 468
Target Start/End: Original strand, 14664152 - 14664306
Alignment:
Q  306 cctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaat 405  Q
    |||| |||||||||||||||||||||| ||||||||||| || || |||| |||||| |    |  |  ||||||||||| ||| ||||||| ||| |||    
T  14664152 cctagttttttagtgagagaaacttcatcttctctctaaattatctttctttttcactc----attattagtggttttaggtca-tttttgatctagaat 14664246  T
Q  406 catccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaa 468  Q
    || || |||||||| |||||||   | |||||||| ||||||| ||||||||||| |||||||    
T  14664247 ca-ccatctgcatcttttttcc--atgctttcaatttaaataaatgatttccacacatatcaa 14664306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 495
Target Start/End: Complemental strand, 14726651 - 14726585
Alignment:
Q  429 ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    |||||||||||||||| |||||| ||| || ||||||||||| ||||||| |||| ||||| |||||    
T  14726651 ttttctttcaatctaactaagtggttttcatatatatcaagttttttcttatgtgtttttttgtgat 14726585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 462
Target Start/End: Complemental strand, 2058023 - 2057957
Alignment:
Q  394 ttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacata 462  Q
    |||||||||||||| |||||| |||| |||||| ||||  |||||||||||||||||||||| ||||||    
T  2058023 ttgacctaaaatcacccctcttcatc-tttttctcttta-tttcaatctaaataagtgattttcacata 2057957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 14726787 - 14726743
Alignment:
Q  300 gccggccctaattttttagtgagagaaacttcaacttctctctaa 344  Q
    |||||||||| |||| ||||||||||||||| |||||||||||||    
T  14726787 gccggccctagttttctagtgagagaaactttaacttctctctaa 14726743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 19349602 - 19349654
Alignment:
Q  430 tttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgt 482  Q
    |||||||||||||||| |||| |||| |||||||||||||  |||||||||||    
T  19349602 tttctttcaatctaaacaagtaattttcacatatatcaagaattttcttttgt 19349654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 480
Target Start/End: Original strand, 28386830 - 28386888
Alignment:
Q  421 tttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
    ||||||||||||||||||||||||  ||||| ||| |||||||||||||| |||| ||||    
T  28386830 tttttcccttttctttcaatctaaccaagtggttt-cacatatatcaagttttttttttt 28386888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 462
Target Start/End: Original strand, 30371601 - 30371685
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacata 462  Q
    |||||||| | ||| | |||||||| |||||| |||||| |||| |||||| ||||  |||||||||||||||||||||| ||||||    
T  30371601 gtggttttgggtcaatatttgacctgaaatcacccctcttcatc-tttttctcttta-tttcaatctaaataagtgattttcacata 30371685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 492
Target Start/End: Original strand, 31314648 - 31314721
Alignment:
Q  421 tttttcccttttctttcaatctaaataagtgatttccac--atatatcaagtgttttcttttgtgctttttcgt 492  Q
    |||||||| |||||||  || ||||||||||||||||||  |||||||||||  |||||||| || ||||||||    
T  31314648 tttttcccctttcttttgatataaataagtgatttccacatatatatcaagttatttcttttctgttttttcgt 31314721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 492
Target Start/End: Original strand, 31364396 - 31364469
Alignment:
Q  421 tttttcccttttctttcaatctaaataagtgatttccac--atatatcaagtgttttcttttgtgctttttcgt 492  Q
    |||||||| |||||||  || ||||||||||||||||||  |||||||||||  |||||||| || ||||||||    
T  31364396 tttttcccctttcttttgatataaataagtgatttccacatatatatcaagttatttcttttctgttttttcgt 31364469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 489
Target Start/End: Original strand, 1409389 - 1409460
Alignment:
Q  421 tttttcccttttctttcaatctaa---ataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||| ||||||||||| |||||||   ||||||||||| ||||||||| || | |||||||||||| |||||    
T  1409389 ttttccccttttcttttaatctaataaataagtgattttcacatatattaaattttttcttttgtgtttttt 1409460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 14082567 - 14082518
Alignment:
Q  421 tttttcccttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    ||||| |||||| ||||||||||||||||||  || ||||||||||||||    
T  14082567 ttttttccttttatttcaatctaaataagtggctttcacatatatcaagt 14082518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 462
Target Start/End: Complemental strand, 41214817 - 41214776
Alignment:
Q  421 tttttcccttttctttcaatctaaataagtgatttccacata 462  Q
    |||||| | ||||||||||||| |||||||||||||||||||    
T  41214817 tttttctcatttctttcaatctgaataagtgatttccacata 41214776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 462
Target Start/End: Original strand, 10649348 - 10649414
Alignment:
Q  394 ttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacata 462  Q
    ||||||| |||||| |||||| |||| |||||| ||||  |||||||||||||||||||||| ||||||    
T  10649348 ttgacctgaaatcacccctcttcatc-tttttctcttta-tttcaatctaaataagtgattttcacata 10649414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 434 - 466
Target Start/End: Original strand, 16981223 - 16981255
Alignment:
Q  434 tttcaatctaaataagtgatttccacatatatc 466  Q
    |||||||||||||||||||||| ||||||||||    
T  16981223 tttcaatctaaataagtgatttacacatatatc 16981255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 2e-53; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 311 - 489
Target Start/End: Original strand, 49626694 - 49626872
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    |||||| |||||||||||| |||||||||||||||| ||| ||||||||||| | ||||| ||| |||||||||| ||||| ||||||||||||||| ||    
T  49626694 tttttttgtgagagaaactccaacttctctctaagtgttccttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcaccc 49626793  T
Q  411 ctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||| |||| |||||||| ||||||||||||| |||||    
T  49626794 ctctgcatcttttttcccctttctttctatctaaataagtgattttcacaaatatcaagcgttttcttttgtgtttttt 49626872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 302 - 483
Target Start/End: Original strand, 12634942 - 12635123
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||| |||||||||||||||||||  |||||||||||| |||||  ||||||||||| ||||||| | | |||||||||| ||||||| |||||||    
T  12634942 cggccctagttttttagtgagagaaactcaaacttctctctatgttttttttctctttcactcgtcgaggatgtgtggttttaggtcattttctgaccta 12635041  T
Q  402 aaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
     ||||| |||| |||||| ||||||||  || | |||||||||||||||||||| |||||||||||||||||||||||||||    
T  12635042 taatcacccctttgcatcttttttcccaattttgtcaatctaaataagtgattttcacatatatcaagtgttttcttttgtg 12635123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 305 - 481
Target Start/End: Complemental strand, 32679413 - 32679237
Alignment:
Q  305 ccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaa 404  Q
    ||||| ||||||||||||||||| | |||||| ||||||||||||| ||||||||||| ||||||| ||| |||||||||  |||||||||||| || ||    
T  32679413 ccctagttttttagtgagagaaattccaacttttctctaagttttctttctctttcactcgtcgaggaggggtggttttatgtcattttttgacatagaa 32679314  T
Q  405 tcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttg 481  Q
    ||||||||||||| |  ||||  ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||    
T  32679313 tcatccctctgcaccaattttatcttttctttcaatttaaataagtgatttccacatatatcaattgttttattttg 32679237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 299 - 489
Target Start/End: Original strand, 44543044 - 44543233
Alignment:
Q  299 agccggccctaatttt-ttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttga 397  Q
    ||||||||||| |||| ||||||||||||||| |||||||||||||||||||| ||||||||||| | ||||| | | ||| |||||| | ||| |||||    
T  44543044 agccggccctagtttttttagtgagagaaactccaacttctctctaagttttccttctctttcactcatcgaggaagggtgcttttaggttattctttga 44543143  T
Q  398 cctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||||||||  |||||||||| |||||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  44543144 cctaaaatca-gcctctgcatcttttttccc-tttctttcgatctaaataagtgattttcacaaatatcaagtgttttcttttgtgtttttt 44543233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 305 - 495
Target Start/End: Original strand, 47132693 - 47132868
Alignment:
Q  305 ccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaa 404  Q
    ||||| ||||||||||||||||||| |||||||| | |||||||||||| |||||||| ||| ||| ||| ||| |||||| ||||||||              
T  47132693 ccctagttttttagtgagagaaactccaacttcttt-taagttttcgttttctttcactcgttgaggaggggtgattttaggtcattttt---------- 47132781  T
Q  405 tcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
        |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  47132782 ----ccctctgcatcctttttcccttttctttcaatctaaataagtgatttctacatatatcaagtgttttcttttgtgctttttcgtgat 47132868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 298 - 480
Target Start/End: Complemental strand, 34878592 - 34878410
Alignment:
Q  298 gagccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttga 397  Q
    |||||||||||| |||| |||||||||||||| |||||||||| |||  |||| |||||||||   | ||||| ||| |||||||||| |||||||||||    
T  34878592 gagccggccctagttttctagtgagagaaactccaacttctctttaaactttctttctctttcgttcatcgaggaggggtggttttaggtcattttttga 34878493  T
Q  398 cctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
    |||| |||||  | ||| |||| ||||||| |||||||||||| |||||||||| ||| |||| ||||||||| |||| ||||    
T  34878492 cctagaatcactcatctacatcttttttccattttctttcaatttaaataagtggttttcacacatatcaagttttttgtttt 34878410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 7337983 - 7337792
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||| |||||| ||||||||||||||||||||||  |||| ||||| |||   | ||||| |||  ||||| ||  |||||||||||     
T  7337983 agccggccctagttttctagtgaaagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggagggatggttctatgtcattttttgat 7337884  T
Q  399 ctaaaatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| ||||| |||||| |||| ||||||| |||||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||| |||||    
T  7337883 ctagaatcacccctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttt 7337792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 304 - 495
Target Start/End: Original strand, 16161609 - 16161799
Alignment:
Q  304 gccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaa 403  Q
    ||||||||||| ||||||||||||||     |||||||||| ||||| | ||||||||| | ||||| ||| ||  |||||| ||| ||||||||||| |    
T  16161609 gccctaattttctagtgagagaaactctgcattctctctaaattttcttcctctttcacacatcgaggaggggtaattttaggtcaatttttgacctaga 16161708  T
Q  404 atcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    |||| | |||| |||  |||||| | ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||    
T  16161709 atcacctctcttcatattttttctcctttatttcaatctaaataagtgatttccacatacatcaagt-ttttcttttgtgttttttcgtgat 16161799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 296 - 482
Target Start/End: Complemental strand, 15435195 - 15435009
Alignment:
Q  296 ttgagccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatttttt 395  Q
    |||||||||| ||| ||||||| ||||||||||| ||||||||||| ||   ||| ||||  ||||  | || || ||| | |||||||| |||||||||    
T  15435195 ttgagccggctctagttttttattgagagaaactccaacttctctcaaaaccttctttcttcttcattcatcaaggaggggcggttttaggtcatttttt 15435096  T
Q  396 gacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgt 482  Q
    || ||| ||||| |||||| |||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||| ||| |||||||    
T  15435095 gatctagaatcaaccctctacatcttttttcccttttctttcaatctaaataagtgtttttcacataaatcaagtttttccttttgt 15435009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 299 - 495
Target Start/End: Original strand, 1742053 - 1742249
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    |||||||| || |||| ||||||||||||||  ||||||| |||||  || | |||||||||   | || || |   |||||||||| ||||||||||||    
T  1742053 agccggccttagttttctagtgagagaaactcaaacttctttctaaacttcctttctctttcgttcatcaaggaatggtggttttaggtcattttttgac 1742152  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||| ||||| |||||| |||| |||  |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||  ||||| |||||    
T  1742153 ctagaatcacccctctccatcttttcccccttttctttcaatctaaataagtggttttcacatatatcaagttttttcttttgtatttttttgtgat 1742249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 314 - 489
Target Start/End: Original strand, 18939109 - 18939283
Alignment:
Q  314 tttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctc 413  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| ||||    ||||| ||  |||||||||| ||||||||||| ||| ||||| | |||    
T  18939109 tttagtgagagaaacttcaccttctctctaagttttctttctccttcattaatcgaggagaggtggttttaggtcattttttgatctagaatcacctctc 18939208  T
Q  414 tgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||| ||||||||| ||||||||||| |||||||||  ||| |||| ||||||||| |||  ||||||| |||||    
T  18939209 tgcat-ctttttcccctttctttcaatttaaataagtagttttcacacatatcaagtttttcattttgtgtttttt 18939283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 380 - 495
Target Start/End: Complemental strand, 23291881 - 23291766
Alignment:
Q  380 ttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
    |||||| ||||||||||||||| ||||| |||||  |||| |||||| |||||||||||||||||||||||| ||| |||||||||||||| ||||||||    
T  23291881 ttttaggtcattttttgacctagaatcacccctcgacatcttttttctcttttctttcaatctaaataagtggttttcacatatatcaagttttttcttt 23291782  T
Q  480 tgtgctttttcgtgat 495  Q
    |||| ||||| |||||    
T  23291781 tgtgtttttttgtgat 23291766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 366 - 489
Target Start/End: Original strand, 32394838 - 32394961
Alignment:
Q  366 tcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatat 465  Q
    ||||| ||| |||||||||| |||||||||||| || ||||||||||||||||| |||| ||||||||||||||||||||| |||| ||| ||||| |||    
T  32394838 tcgaggaggggtggttttaggtcattttttgacttagaatcatccctctgcatctttttccccttttctttcaatctaaatgagtggttttcacatctat 32394937  T
Q  466 caagtgttttcttttgtgcttttt 489  Q
    ||||| ||| |||||||| |||||    
T  32394938 caagtttttccttttgtgtttttt 32394961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 311 - 460
Target Start/End: Original strand, 34528503 - 34528650
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||||||| ||| ||| |||||||| ||| ||||||| || |||||||| | ||||  | |||||||||||  ||||||||||||||| ||||| ||    
T  34528503 ttttttagtgaaagagactccaacttctgtcttagttttctttttctttcactcatcgaagatgagtggttttatgtcattttttgacctagaatcaccc 34528602  T
Q  411 ctctgcatcctttttcccttttctttcaatctaaataagtgatttccaca 460  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||||||    
T  34528603 ctctgcat-ctttttccc-tttctttcgatctaaataagtgatttccaca 34528650  T

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Target: chr1; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 314 - 488
Target Start/End: Complemental strand, 29738941 - 29738766
Alignment:
Q  314 tttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctc 413  Q
    ||||| |||||||||| |||| |||||||||  |||| ||||| |||   | ||||| ||| |||||||||| ||| ||||| ||||| ||||| |||||    
T  29738941 tttagagagagaaactccaacatctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcaattttttacctagaatcacccctc 29738842  T
Q  414 tgcatcctttttccctttt-ctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    | |||| |||| ||||||| ||||||||||||||||||| ||| ||||| |||||||| |||||||||||| ||||    
T  29738841 tacatctttttcccctttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttt 29738766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 308 - 462
Target Start/End: Complemental strand, 34413402 - 34413247
Alignment:
Q  308 taattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatca 407  Q
    ||||||||||||||||||||||    ||||||||||||||||  |||||||||||   ||||| ||| ||| |||||| ||| ||||| | ||| |||||    
T  34413402 taattttttagtgagagaaactctgccttctctctaagttttttttctctttcacttatcgagtaggggtgattttaggtcaattttttatctagaatca 34413303  T
Q  408 tccctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacata 462  Q
     ||||||||||| ||||| ||| |||||||||||||||||||||||||| ||||||    
T  34413302 cccctctgcatctttttttcccctttctttcaatctaaataagtgattttcacata 34413247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 311 - 478
Target Start/End: Original strand, 45415343 - 45415511
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    |||| ||||||||||||||||||||||||| |||  |||| ||||  |||     ||||| ||| |||||||||| ||||||||||| ||| ||||| ||    
T  45415343 ttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcgtttatcgaggaggggtggttttaggtcattttttgatctagaatcaccc 45415442  T
Q  411 ctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttctt 478  Q
    |||| |||| |||||||| |||||||||||| |||||||||| ||| ||||| |||||||| |||||||    
T  45415443 ctctacatcttttttccccttttctttcaatttaaataagtggttttcacatctatcaagttttttctt 45415511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 320 - 488
Target Start/End: Complemental strand, 11462747 - 11462577
Alignment:
Q  320 gagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatc 419  Q
    |||||||||||||| ||||||||||  |||| ||||| |||   | | ||  ||| ||| |||||| | ||||||||||||| ||||| |||||||||||    
T  11462747 gagagaaacttcaatttctctctaaactttctttctccttcgttcattgacgaggggtgattttaggttattttttgacctagaatcacccctctgcatc 11462648  T
Q  420 ctttttccc--ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
     ||||||||  |||||||||||||||||||||||  || ||||| |||||||| |||||||||||| ||||    
T  11462647 ttttttcccctttttctttcaatctaaataagtgggtttcacatctatcaagttttttcttttgtgttttt 11462577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 301 - 483
Target Start/End: Complemental strand, 51916970 - 51916787
Alignment:
Q  301 ccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacct 400  Q
    ||||||||| ||||||||||||||||||||||| || |||||||  |||| ||||| |||   | | ||| ||| ||||||||||   ||||||||||||    
T  51916970 ccggccctagttttttagtgagagaaacttcaatttttctctaaactttctttctccttcgttcatagaggaggggtggttttaggctattttttgacct 51916871  T
Q  401 aaaatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    |||||||  | ||| |||| ||||| | |||||||||||||||||||||||| ||| || ||| ||||||| ||| ||||||||    
T  51916870 aaaatcactcatctacatctttttttctcttttctttcaatctaaataagtggttttcaaataaatcaagtttttccttttgtg 51916787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 302 - 489
Target Start/End: Complemental strand, 10776777 - 10776590
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||| ||| |||||||| |||||||||| ||| ||||||||||  |||| ||||| ||||  | ||||| | | ||||||||||||||||||||||||||    
T  10776777 cggcactagttttttagggagagaaactccaatttctctctaaactttctttctccttcattcatcgaggaagggtggttttagatcattttttgaccta 10776678  T
Q  402 aaatcatccctctgcatcctttttccc---ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
     ||||| || ||| |||| |||||  |   ||||||||||||||||||||||| |||  ||||||   |||||||| ||||||||||||||    
T  10776677 gaatcacccatctacatcttttttttcctattttctttcaatctaaataagtggtttttacatat---aagtgtttccttttgtgcttttt 10776590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 339 - 495
Target Start/End: Original strand, 9341536 - 9341692
Alignment:
Q  339 ctctaagttttcgttctctttcacccgtcga-gaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttc 437  Q
    |||||||| ||| ||||||||||| | |||| || || |||||||||| |||||||||||| || ||||| |  | |||||| |||||||  ||||||||    
T  9341536 ctctaagtcttctttctctttcactcatcgaagagggggtggttttaggtcattttttgacttagaatcacctgtatgcatc-tttttcctctttctttc 9341634  T
Q  438 aatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||| ||||||||  |||| ||||||||||||||||||||||||||| |||| ||||||    
T  9341635 aatataaataagaaattttcacatatatcaagtgttttcttttgtgtttttacgtgat 9341692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 342 - 490
Target Start/End: Original strand, 15492109 - 15492254
Alignment:
Q  342 taagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatc 441  Q
    ||||||||| |||||||| || | | ||| ||  |||||||||| || ||||||||||||||||||||  | |||||| ||||  || ||||||||||||    
T  15492109 taagttttctttctcttttactcattgaggagaggtggttttaggtc-ttttttgacctaaaatcatcattttgcatcttttt--ccatttctttcaatc 15492205  T
Q  442 taaataagtgatttccacatatatcaagtgttttcttttgtgctttttc 490  Q
    ||||||| |||||| |||||||||||||| |||||||||||| ||||||    
T  15492206 taaataaatgattttcacatatatcaagttttttcttttgtgttttttc 15492254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 334 - 479
Target Start/End: Original strand, 48749997 - 48750140
Alignment:
Q  334 cttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttc 433  Q
    ||||||||||||||||| | ||||||||| | ||||| ||| ||| | |||| |||  |||||||||| |||||  ||| |||||| |||||||| ||||    
T  48749997 cttctctctaagttttcttcctctttcactcatcgaggaggggtgatattaggtcaaattttgacctagaatcactcct-tgcatcttttttcccctttc 48750095  T
Q  434 tttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
    |||||||||||||||||||||| |||||| ||||||| ||||||||    
T  48750096 tttcaatctaaataagtgattttcacatacatcaagt-ttttcttt 48750140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 312 - 488
Target Start/End: Original strand, 5983621 - 5983799
Alignment:
Q  312 tttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccc 411  Q
    ||||||| ||||||||||| |||||||||||||  |||  ||||| |||   | ||||| |||  ||||||||||||||||||||||||| |||||  |     
T  5983621 tttttagagagagaaactttaacttctctctaaactttatttctccttcgttcatcgaggagggatggttttagatcattttttgacctagaatcactcg 5983720  T
Q  412 tctgcatcctttttccc--ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    ||| |||| ||||||||  ||||||||| |||||||||| || ||| ||||| |||||||| ||| |||||||| ||||    
T  5983721 tctacatcttttttcccctttttctttcgatctaaataaatggttttcacatctatcaagtttttgcttttgtgttttt 5983799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 311 - 488
Target Start/End: Original strand, 27456324 - 27456503
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatc-attttttgacctaaaatcatc 409  Q
    ||||||||||||| |||||||||||||| |||||  |||| ||||| ||||  ||||||| |||  ||||||||  ||  |||||| |||||||||||      
T  27456324 ttttttagtgagaaaaacttcaacttctttctaaactttctttctccttcattcgtcgaggagggatggttttaactctttttttttacctaaaatcact 27456423  T
Q  410 cctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    ||||| |||| ||||||| |||||||||||||||||||||||| ||| | ||||||| ||||  || |||||||| ||||    
T  27456424 cctctacatcttttttcctcttttctttcaatctaaataagtggttttcgcatatattaagttcttccttttgtgttttt 27456503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 390 - 482
Target Start/End: Original strand, 31918852 - 31918945
Alignment:
Q  390 ttttttgacctaaaatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgt 482  Q
    |||||| | |||||||||||| |||||||| ||||||| ||||||| |||||||||||||||| ||| |||||||||||||| |||||||||||    
T  31918852 ttttttaatctaaaatcatccatctgcatcttttttcctcttttctatcaatctaaataagtggttttcacatatatcaagttttttcttttgt 31918945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 302 - 470
Target Start/End: Original strand, 31983955 - 31984124
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    ||||||||  |||||||||||||||||| ||||||||||||||  |||| ||||  ||    | || || ||  |||||||||| |||||||||||||||    
T  31983955 cggccctagatttttagtgagagaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggtggttttaggtcattttttgaccta 31984054  T
Q  402 aaatcatccctctgcatcctttt-tcccttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
     || || | |||| |||| |||| ||||||||||||| ||||||||||||| ||| ||||||||||||||    
T  31984055 gaagcacctctctacatctttttttcccttttctttcgatctaaataagtggttttcacatatatcaagt 31984124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 35484698 - 35484520
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||| |||||||||||||| ||||||||||||||  |||| ||||| |||   | ||||| ||| |||||| ||| ||||||||||||    
T  35484698 agccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttgtaggtcattttttgac 35484599  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||| ||| |            ||||||||||||||||||||||||||||||| ||| ||||| |||||||| |||||  ||||| |||||    
T  35484598 ctaacatctt------------tttttcccttttctttcaatctaaataagtggttttcacatctatcaagttttttcaattgtgtttttt 35484520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 299 - 480
Target Start/End: Original strand, 45789337 - 45789517
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    |||||||| || |||||||||||||||||||  |  |||||||||| ||||  ||||  ||||  | ||||| |    ||||||||| ||||||||||||    
T  45789337 agccggccttagttttttagtgagagaaactctacgttctctctaaattttatttctacttcattcatcgaggattgatggttttaggtcattttttgac 45789436  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
    ||| ||||| |||||||||| ||||||||| ||||||||||| |||||||||| ||| ||||| ||| |||| |||| ||||    
T  45789437 ctagaatcacccctctgcat-ctttttcccctttctttcaatttaaataagtggttttcacatgtattaagttttttttttt 45789517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 35462358 - 35462166
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttg-a 397  Q
    |||||||| || |||||||||| ||||||||  ||||| |||||||  |||| ||||| |||     | ||||| | |||||||||| |||||||||  |    
T  35462358 agccggccttagttttttagtgggagaaactctaacttatctctaaactttctttctccttcgtttattgagaatgggtggttttaggtcatttttttta 35462259  T
Q  398 cctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    | || |||||||||||| |||| |||||||| |||||||||||| |||||||||| ||| ||||| |||||||| ||| |||||||| |||||    
T  35462258 catagaatcatccctctacatcttttttccccttttctttcaatttaaataagtggttttcacatctatcaagtttttccttttgtgtttttt 35462166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 307 - 465
Target Start/End: Original strand, 44915425 - 44915585
Alignment:
Q  307 ctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggag-tggttttagatcattttttgacctaaaat 405  Q
    |||||||| |||||||| ||| ||||||||||||||||  |||| ||||| ||||  | ||||| ||| | ||||||||| |||||||||| | ||||||    
T  44915425 ctaattttctagtgagaaaaatttcaacttctctctaaactttctttctcattcattcatcgaggaggggttggttttaggtcattttttggcttaaaat 44915524  T
Q  406 catccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatat 465  Q
    |||| |||| |||| ||||||| ||| |||||| ||||||||||||| ||| | |||||||    
T  44915525 catcactctacatcttttttcctcttatctttccatctaaataagtggttttcgcatatat 44915585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 311 - 476
Target Start/End: Original strand, 940149 - 940314
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||||||||| |||||  || |||||||||| ||||| ||||||||    | ||||| | |||||||||||  ||||||||| ||||| ||||| ||    
T  940149 ttttttagtgagaaaaactctaaattctctctaaattttctttctcttttcttcatcgaggatgagtggttttaagtcatttttt-acctagaatcaccc 940247  T
Q  411 ctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttc 476  Q
     |||||||| | |||||| |||||||| ||| |||||||||| ||| |||||||||||||| |||||    
T  940248 atctgcatcttgtttccccttttcttttaatttaaataagtggttttcacatatatcaagttttttc 940314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 391 - 495
Target Start/End: Complemental strand, 13075863 - 13075760
Alignment:
Q  391 tttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatc-aagtgttttcttttgtgcttttt 489  Q
    |||||||| || |||| ||| |||||||| |||||| | |||||||||||||||||||||||||  |||||||||| |||| |||||||||||| |||||    
T  13075863 tttttgacatagaatcttccatctgcatcttttttctcatttctttcaatctaaataagtgatt--cacatatatctaagtattttcttttgtgtttttt 13075766  T
Q  490 cgtgat 495  Q
    ||||||    
T  13075765 cgtgat 13075760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 311 - 489
Target Start/End: Original strand, 19060686 - 19060864
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||| ||| ||||||| ||| || ||  ||||||||| ||||||||||| | || || | | |||||||||| | ||| ||| | ||||||||| ||    
T  19060686 ttttttattgaaagaaactccaatttttccgtaagttttccttctctttcactcatcaagcacgggtggttttaggttattcttttatctaaaatcaccc 19060785  T
Q  411 ctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
     |||||||| ||||| || |||||||| || |||||||| ||||| |||| |||||||| |||||||||| || |||||    
T  19060786 atctgcatctttttttccctttctttcgatttaaataagcgattttcacaaatatcaagcgttttcttttatgtttttt 19060864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 302 - 489
Target Start/End: Complemental strand, 21947934 - 21947747
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    ||||| || |||| |||||||||||||||||| || |||||||  |||| ||||||| |   | ||||| | | |||||||||| | ||||||  |||||    
T  21947934 cggccttagttttctagtgagagaaacttcaatttttctctaaactttctttctctt-cgttcatcgaggatgggtggttttaggttattttta-accta 21947837  T
Q  402 aaatcatccctctgcatccttttt--cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
     |||||||| ||| |||  |||||  |||||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||| |||||    
T  21947836 gaatcatccatctacatatttttttccccttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgtttttt 21947747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 421 - 495
Target Start/End: Complemental strand, 37720318 - 37720245
Alignment:
Q  421 tttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    |||||| | ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||    
T  37720318 tttttctcctttctttcaatctaaataagtgatttccacatacatcaagt-ttttcttttgtgttttttcgtgat 37720245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 489
Target Start/End: Original strand, 14872423 - 14872603
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||||||||||||||| |||||||| ||| |  |||| ||||  ||||  | ||||||||| |||||||| | |||||||||||| || |||||  |    
T  14872423 ttttttagtgagagaaactccaacttctttctgaactttctttcttcttcattcatcgagaaggtgtggttttcggtcattttttgacttagaatcactc 14872522  T
Q  411 ctctgcatcctttttccc--ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||| |||| ||||| ||  |||||||||||| |||||||||| |||  ||| ||||||||| ||| | |||||| |||||    
T  14872523 ctctacatctttttttccctttttctttcaatgtaaataagtggtttttacaaatatcaagtttttccatttgtgtttttt 14872603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 308 - 480
Target Start/End: Original strand, 21686654 - 21686825
Alignment:
Q  308 taattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatca 407  Q
    |||||||||||||||||||||| |||||| | ||||| ||||| |||||||||   | ||||| ||   || |||||| ||||||||||| ||| |||||    
T  21686654 taattttttagtgagagaaactgcaacttttttctaaattttctttctctttcgttcatcgaggagagatgattttaggtcattttttgatctagaatca 21686753  T
Q  408 tccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
     | |||| |||| ||||||| |||||||||||| |||||||||| ||| |||  || |||||| |||| ||||    
T  21686754 -ctctctacatcttttttccattttctttcaatttaaataagtggttttcacccatttcaagttttttttttt 21686825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 403 - 495
Target Start/End: Complemental strand, 36775931 - 36775841
Alignment:
Q  403 aatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||||| |||||| |||||| ||||||| |||||||| ||| |||||||||||    
T  36775931 aatcacccctctgcatcttttttcccttt-ctttcaatctaaataaatgattttcacatacatcaagt-ttttctttcgtgttttttcgtgat 36775841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 377 - 465
Target Start/End: Original strand, 50377177 - 50377264
Alignment:
Q  377 tggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatat 465  Q
    ||||||||| ||||||||||||||| |||||||||||| |||  |||| || |||||||||||| |||||||||| ||| |||||||||    
T  50377177 tggttttaggtcattttttgacctagaatcatccctct-catttttttcccattttctttcaatttaaataagtggttttcacatatat 50377264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 394 - 489
Target Start/End: Complemental strand, 13145036 - 13144941
Alignment:
Q  394 ttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||||||| |||||||||||| |||  |||| ||| |||||||||||||||||||||| ||| || ||||||||| | ||| |||||||| |||||    
T  13145036 ttgacctagaatcatccctctacatatttttacccctttctttcaatctaaataagtggttttcatatatatcaactttttccttttgtgtttttt 13144941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 376 - 495
Target Start/End: Original strand, 15836042 - 15836160
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    |||||||||| ||||||||||||||| ||||| | || | |||  ||||  |||||||| ||||| |||||||||| ||| |||||| |||||||||||     
T  15836042 gtggttttaggtcattttttgacctagaatcaccgctatacatatttttctccttttctatcaatttaaataagtggttttcacatacatcaagtgtttc 15836141  T
Q  476 cttttgtgctttttcgtgat 495  Q
     ||||||| |||||||||||    
T  15836142 gttttgtg-tttttcgtgat 15836160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 489
Target Start/End: Complemental strand, 8212149 - 8212039
Alignment:
Q  380 ttttagatcattttttgacctaaaatcatccctctgcatcctttttc-ccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctt 478  Q
    |||||||| ||||||||| ||| ||||| | |||| |||| |||||  |||||||||| |||||||||||||| ||| |||||||||||||| ||  |||    
T  8212149 ttttagattattttttgatctacaatcacctctctacatcttttttttccttttctttaaatctaaataagtggttttcacatatatcaagttttccctt 8212050  T
Q  479 ttgtgcttttt 489  Q
    ||||| |||||    
T  8212049 ttgtgtttttt 8212039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 466
Target Start/End: Complemental strand, 569103 - 568936
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggag-tggttttagatca-ttttttg 396  Q
    ||||| || ||||| || |||||||||||||||||||||||| ||| ||| | ||||||||||| | || || ||| | ||||||||  |   ||||||     
T  569103 agccgaccttaattgttcagtgagagaaacttcaacttctctataaattt-ctttctctttcactcatctaggagggggtggttttaagtatgttttttt 569005  T
Q  397 acctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatc 466  Q
    ||||| ||||  |||||| |||| |||||||| |||||||||||||||||||||||||| ||| ||||||    
T  569004 acctagaatcccccctctacatc-tttttcccctttctttcaatctaaataagtgattttcacgtatatc 568936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 483
Target Start/End: Original strand, 26535260 - 26535351
Alignment:
Q  392 ttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    |||||||||| |||||  | ||| |||| ||||  ||||||||||||||||||||||||| ||| ||||||||| |||| ||| ||||||||    
T  26535260 ttttgacctagaatcacacatctacatctttttctccttttctttcaatctaaataagtggttttcacatatattaagtttttccttttgtg 26535351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 308 - 362
Target Start/End: Complemental strand, 24012965 - 24012911
Alignment:
Q  308 taattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcac 362  Q
    |||||||||||||||||||||||||| |||| |||||||| || |||||||||||    
T  24012965 taattttttagtgagagaaacttcaaattctttctaagttctctttctctttcac 24012911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 322 - 483
Target Start/End: Complemental strand, 36894535 - 36894377
Alignment:
Q  322 gagaaacttcaacttctctctaagttttcgttctct-ttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcc 420  Q
    ||||||||||||||||||| ||| ||||| |||||  ||||    ||||  ||| |||||| ||  ||||||||||||||| | ||| |||||| ||||     
T  36894535 gagaaacttcaacttctctttaaattttctttctccgttca----tcgaagaggggtggttctaagtcattttttgacctagagtcacccctctacatct 36894440  T
Q  421 tttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    ||||||| |||||||||| ||||||||||||| ||| ||||| |||||||| | | ||||||||    
T  36894439 tttttcctcttttctttcgatctaaataagtggttt-cacatctatcaagtttctccttttgtg 36894377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 482
Target Start/End: Complemental strand, 27580441 - 27580263
Alignment:
Q  304 gccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaa 403  Q
    |||||| |||| |||||||||||||| |||||||||| ||||||||  || || || |  ||||| ||||   ||||||  | |||||||| |||||| |    
T  27580441 gccctagttttgtagtgagagaaactccaacttctctttaagttttt-ttgtcctttattcgtcgggaagagatggtttcgggtcattttt-gacctaga 27580344  T
Q  404 atcatccctctgcatcctttttccct--tttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgt 482  Q
    ||||||||||| |||| |||||   |  |||| ||||||||| ||||||| ||| |||||||||||||| ||| |||||||    
T  27580343 atcatccctctacatcttttttttttcctttcattcaatctatataagtggttttcacatatatcaagtttttccttttgt 27580263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 489
Target Start/End: Original strand, 34479346 - 34479454
Alignment:
Q  380 ttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
    |||||| ||||||||| |  || |||||| | |||||||| |||||||| ||||||| ||| |||||||||| ||| |||| ||||||||| |||| |||    
T  34479346 ttttaggtcattttttaatttagaatcattcgtctgcatcttttttccc-tttcttttaatttaaataagtggttttcacacatatcaagttttttattt 34479444  T
Q  480 tgtgcttttt 489  Q
    |||| |||||    
T  34479445 tgtgtttttt 34479454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 438
Target Start/End: Complemental strand, 7837059 - 7836947
Alignment:
Q  326 aacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatccttttt 425  Q
    |||| ||||||||||||||   ||| |||||||||   | ||||| | | |||||||||| ||||||||||| ||| ||||| |||||  |||| |||||    
T  7837059 aactccaacttctctctaaaccttctttctctttcgttcatcgaggaagggtggttttaggtcattttttgatctagaatcacccctcgacatctttttt 7836960  T
Q  426 cccttttctttca 438  Q
    |||||||||||||    
T  7836959 cccttttctttca 7836947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 489
Target Start/End: Original strand, 34329579 - 34329677
Alignment:
Q  391 tttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||||||||||||||||  | |||  ||| ||||||||| |||||||||| ||||||| || ||| ||||||||| || | ||| |||||||| |||||    
T  34329579 tttttgacctaaaatcactcttctaaatcatttttccctcttctttcaatttaaataaatggttttcacatatattaattttttgcttttgtgtttttt 34329677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 465
Target Start/End: Complemental strand, 31692730 - 31692618
Alignment:
Q  352 ttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtg 451  Q
    ||||||||||| | ||||| | | ||| |||||| ||||||||||||||  ||||| ||||||||||  ||||| || |||||||| |||||| ||| ||    
T  31692730 ttctctttcactcatcgaggatgtgtgattttaggtcattttttgaccttgaatcacccctctgcatttttttttcc-tttctttcgatctaagtaattg 31692632  T
Q  452 atttccacatatat 465  Q
    |||| |||| ||||    
T  31692631 attttcacacatat 31692618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 468
Target Start/End: Complemental strand, 40163688 - 40163650
Alignment:
Q  430 tttctttcaatctaaataagtgatttccacatatatcaa 468  Q
    |||||||| || |||||||||||||||||||||||||||    
T  40163688 tttctttctatataaataagtgatttccacatatatcaa 40163650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 483
Target Start/End: Complemental strand, 30818492 - 30818443
Alignment:
Q  434 tttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    |||||||||||||||||||||| |||||| ||| ||| |||| |||||||    
T  30818492 tttcaatctaaataagtgattttcacataaatctagtttttttttttgtg 30818443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 6218144 - 6218104
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctct 342  Q
    ||||||||||||||||||||| |||| | ||||||||||||    
T  6218144 cggccctaattttttagtgagggaaattccaacttctctct 6218104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 458
Target Start/End: Complemental strand, 50625263 - 50625227
Alignment:
Q  422 ttttcccttttctttcaatctaaataagtgatttcca 458  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  50625263 tttttccttttctttcaatctagataagtgatttcca 50625227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 1e-45; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 299 - 495
Target Start/End: Original strand, 30493304 - 30493495
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||| ||||| ||||||||||||||||||| |||| ||||| ||||||||| || |||||||| ||||||  ||| |||||||| | ||||||||||||    
T  30493304 agccgaccctagttttttagtgagagaaactccaacctctctttaagttttctttttctttcactcgtcgaagagg-gtggttttcggtcattttttgac 30493402  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||| ||||| || |  ||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30493403 ctagaatcacccat--gcatcttttttcccttt-ctttcaaactaaataagtgatttccacatatatcaagtgttttcttttgtg-tttttcgtgat 30493495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 33053488 - 33053297
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||| ||||| |||| ||||| |||||||| ||||||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| ||||||||||||    
T  33053488 agccgaccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgac 33053389  T
Q  399 ctaaaatcatccctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| |||||||||||| |||| ||||| |||||||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||| |||||    
T  33053388 ctagaatcatccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttt 33053297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 299 - 489
Target Start/End: Original strand, 12170265 - 12170456
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||| |||||||||||||| |||||||||||||   |||| ||||| |||   | ||||| ||| |||||||||| ||||||||||||    
T  12170265 agccggccctagttttctagtgagagaaactccaacttctctctagactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgac 12170364  T
Q  399 ctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| ||||| |||||| |||| |||||||| ||||||||||||||||||||||| ||| ||||| |||||||| |||  ||||||| |||||    
T  12170365 ctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttcgttttgtgtttttt 12170456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 302 - 489
Target Start/End: Complemental strand, 3913890 - 3913703
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||| |||| |||||||||||||| ||||||||||||||  |||| ||||| ||    | ||||| ||| |||||||||| |||||||||||||||    
T  3913890 cggccctagttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagg-gtggttttaggtcattttttgaccta 3913792  T
Q  402 aaatcatccctctgcatcctttttcccttt-tctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
     ||||| ||||| ||||| |||||||| || |||||||||||||||||||| ||| ||||| |||||||| |||||||||||| |||||    
T  3913791 gaatcacccctccgcatcttttttcccattctctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgtttttt 3913703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 302 - 470
Target Start/End: Original strand, 1523181 - 1523347
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    ||||||||||||| ||||||||||||||  |  |||||||||||||||  ||||||||||| | |  || ||| ||| |||||| ||| |||||||||||    
T  1523181 cggccctaattttatagtgagagaaactctacattctctctaagttttatttctctttcacacatgaaggaggggtgattttaggtcaatttttgaccta 1523280  T
Q  402 aaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
     ||||| ||||||||||  |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  1523281 gaatca-ccctctgcatt-tttttctcttttctttcaatctaaataagtgatttccacatacatcaagt 1523347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 305 - 495
Target Start/End: Complemental strand, 32192045 - 32191855
Alignment:
Q  305 ccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaa 404  Q
    ||||| |||||||| ||||||||||  || || | ||||||||||| ||||||||||  | || || ||| |||||||||| || |||||||| ||| ||    
T  32192045 ccctagttttttagagagagaaactctaattt-tgtctaagttttctttctctttcattcatcaaggaggggtggttttaggtccttttttgatctacaa 32191947  T
Q  405 tcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||| || |||||||| |||| ||| |||| |||| |||||||||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  32191946 tcacccttctgcatctttttcccccttttatttcgatctaaataagtgatttctacatatatcaagtgttttcttttgtattttttcgtgat 32191855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 380 - 495
Target Start/End: Original strand, 30776517 - 30776631
Alignment:
Q  380 ttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
    |||||| ||| ||||||||||| ||||| ||||||||||  |||||| | ||||||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  30776517 ttttaggtcaatttttgacctagaatcacccctctgcatattttttctcctttctttcaatctaaataagtaatttccacatacatcaagt-ttttcttt 30776615  T
Q  480 tgtgctttttcgtgat 495  Q
    |||| |||||||||||    
T  30776616 tgtgttttttcgtgat 30776631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 68320 - 68130
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||||||||  |||||||| ||||||||||||||  |||| ||||| |||   | ||||| |||  ||||||||| | |||||| |||    
T  68320 agccggccctagttttttagtaggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggatggttttaggtaattttt-gac 68222  T
Q  399 ctaaaatcatccc-tctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| ||||| ||| ||| |||| |||| ||||||||||| |||||||||||||| ||| ||||| |||||||| ||| |||||||| |||||    
T  68221 ctagaatcaccccctctacatctttttccccttttcttttaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttt 68130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 465
Target Start/End: Original strand, 30894427 - 30894573
Alignment:
Q  319 tgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcat 418  Q
    ||||||||||||||||||||||||||  |||  ||||| |||     ||||| ||| |||||||||||||||||||||||||| ||||| |||||| |||    
T  30894427 tgagagaaacttcaacttctctctaaactttt-ttctccttcgttaatcgaggaggggtggttttagatcattttttgacctagaatcacccctctacat 30894525  T
Q  419 c-ctttttcccttttctttcaatctaaataagtgatttccacatatat 465  Q
    |  |||||||||||||||||||||||||||| || ||| |||||||||    
T  30894526 ctgtttttcccttttctttcaatctaaataactggttttcacatatat 30894573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 299 - 495
Target Start/End: Original strand, 14801589 - 14801786
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    |||| ||||| | |||||||||||||||| |    ||||||||||||||||| | ||||||||| | ||||||||| ||| |||||| ||| ||||||||    
T  14801589 agcctgcccttaatttttagtgagagaaattatgtcttctctctaagttttcttcctctttcactcatcgagaaggggtgattttaggtcaatttttgac 14801688  T
Q  399 ctaaaatcatccctctgcatccttttt---cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||| ||| | |||||||||| ||||||   ||| ||| ||| |||  ||||||| ||||| |||||| ||||||| |||||||| |||||||||||||||    
T  14801689 ctagaataacccctctgcattcttttttttccccttttttt-aattaaaataagggattttcacatacatcaagt-ttttctttcgtgctttttcgtgat 14801786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 352 - 480
Target Start/End: Original strand, 28981002 - 28981128
Alignment:
Q  352 ttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtg 451  Q
    ||||||||||| ||||||  |||  ||||||||| |||||||| |||||| ||| || | || | ||| ||||||||||| |||||||||||||||||||    
T  28981002 ttctctttcactcgtcgaatagggttggttttaggtcattttt-gacctagaattattcttccgtatcttttttcccttt-ctttcaatctaaataagtg 28981099  T
Q  452 atttccacatatatcaagtgttttctttt 480  Q
    |||||||||||||||||||||||| ||||    
T  28981100 atttccacatatatcaagtgttttttttt 28981128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 378 - 489
Target Start/End: Original strand, 34018409 - 34018521
Alignment:
Q  378 ggttttagatcattttttgacctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttc 476  Q
    |||||||| ||||||||||||||| ||||| |||||| ||||  ||| ||| |||||||||||| |||||||||| ||| |||||||||||||| |||||    
T  34018409 ggttttaggtcattttttgacctagaatcacccctctacatctctttacccattttctttcaatttaaataagtggttttcacatatatcaagttttttc 34018508  T
Q  477 ttttgtgcttttt 489  Q
    ||||||| |||||    
T  34018509 ttttgtgtttttt 34018521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 311 - 483
Target Start/End: Original strand, 605986 - 606159
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    |||| ||||| |||||||| |||||| |||||||  |||| ||||| |||   | ||||| ||| ||| |||||  |||||||||||||||  |||| ||    
T  605986 ttttctagtgggagaaactccaacttttctctaaactttctttctccttcgttcatcgaggaggggtgattttatgtcattttttgacctaggatcaccc 606085  T
Q  411 ctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    |||| |||| |||||||| ||||||||||||||||||||||| ||| ||||| |||||| | ||| ||||||||    
T  606086 ctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaaatttttccttttgtg 606159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 310 - 495
Target Start/End: Original strand, 8102498 - 8102685
Alignment:
Q  310 attttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatc-attttttgacctaaaatcat 408  Q
    ||||||||||||||||||||    ||||||||||||||||| |  ||||| ||   ||||| ||| ||| |||||| |  | ||||||||||| |||||     
T  8102498 attttttagtgagagaaactatttcttctctctaagttttcttcttctttaacatatcgaggaggggtgattttaggtttaatttttgacctagaatcac 8102597  T
Q  409 ccctctgcatcctttttccct--tttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||||||||||  |||||  ||  |||||||||||||||||||||||||| |||| | ||||||| |||||||||||| |||||||||||    
T  8102598 ccctctgcatattttttttctcctttctttcaatctaaataagtgattttcacaaacatcaagt-ttttcttttgtgttttttcgtgat 8102685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 308 - 475
Target Start/End: Original strand, 32059688 - 32059854
Alignment:
Q  308 taattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatca 407  Q
    ||||||| |||||||||||| | ||| |||||| |||   ||| ||||||||||  | ||||| |   |||||||||  ||||| ||||||||| |||||    
T  32059688 taattttctagtgagagaaattccaagttctctttaaacattctttctctttcattcatcgaggataggtggttttaagtcattgtttgacctagaatca 32059787  T
Q  408 tccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    ||| ||| |||| ||||||||||||||||||||||||||||||  ||| ||||| |||||||| ||||    
T  32059788 tccttctacatc-tttttcccttttctttcaatctaaataagtagttttcacatgtatcaagtttttt 32059854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 495
Target Start/End: Original strand, 545796 - 545989
Alignment:
Q  299 agccggccctaatttttt-agtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttga 397  Q
    |||||||||||||||||| || |||||||||||   ||| | |  |||||||| | ||||||||| | ||||| ||| ||| ||||||  |||||| |||    
T  545796 agccggccctaatttttttagggagagaaactttgtctttttt--aagttttcttcctctttcactcatcgaggaggggtgattttaggccatttt-tga 545892  T
Q  398 cctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    |||| |||||  | ||| |||| |||||||| ||||||||||||||||||||  |||| |||||| ||||||| |||||||| ||| |||||||||||    
T  545893 cctagaatcactcttctacatcttttttcccctttctttcaatctaaataagcaattttcacatacatcaagt-ttttctttcgtgttttttcgtgat 545989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 312 - 488
Target Start/End: Complemental strand, 7515509 - 7515331
Alignment:
Q  312 tttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatttttt-gacctaaaatcatcc 410  Q
    ||||||| ||||||| || ||||||||||||||  || | |||||||||   | ||||| ||| |||||||||||| ||||||| |||||| ||||| ||    
T  7515509 tttttagagagagaagctccaacttctctctaaacttgctttctctttcgttcatcgaggaggggtggttttagattatttttttgacctagaatcaccc 7515410  T
Q  411 ctctgcatcctttttccctttt-ctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    |||| |||  | || ||||||| ||| ||||||||||||||| ||| ||||| |||||||| | |||||||||| ||||    
T  7515409 ctctacattttgttcccctttttcttccaatctaaataagtggttttcacatctatcaagtttcttcttttgtgttttt 7515331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 312 - 448
Target Start/End: Complemental strand, 4010807 - 4010672
Alignment:
Q  312 tttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccc 411  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| || |    | ||| |||||||  ||||||||||||||||||||| ||||| |||    
T  4010807 tttttagtgagagaaacttcatcttctctctaagttttctttctcctttatttattgaggaggagtgactttagatcattttttgacctagaatcacccc 4010708  T
Q  412 tctgcatcctttttcccttttctttcaatctaaataa 448  Q
    ||||  | ||||||  | ||||||||||| |||||||    
T  4010707 tctgtgt-ctttttttcatttctttcaatttaaataa 4010672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 379 - 482
Target Start/End: Original strand, 23128468 - 23128572
Alignment:
Q  379 gttttagatcattttttgacctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttct 477  Q
    ||||||| ||||||||||||||| ||||| |||||| |||| |||| ||| |||||||||| |||||||||||| ||| ||||| |||||||| ||| ||    
T  23128468 gttttaggtcattttttgacctagaatcacccctctacatctttttccccattttctttcattctaaataagtggttttcacatctatcaagtttttcct 23128567  T
Q  478 tttgt 482  Q
    |||||    
T  23128568 tttgt 23128572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 387 - 489
Target Start/End: Original strand, 34222654 - 34222755
Alignment:
Q  387 tcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctt 486  Q
    ||||||||| ||||| ||||| |||||| |||| |||||||| |||||||| ||||||||||||| |||| ||||||||   ||||||||||||||| ||    
T  34222654 tcattttttaacctagaatcacccctctacatc-tttttcccctttctttcgatctaaataagtggtttcaacatatatgcggtgttttcttttgtgttt 34222752  T
Q  487 ttt 489  Q
    |||    
T  34222753 ttt 34222755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 351 - 489
Target Start/End: Complemental strand, 1933966 - 1933827
Alignment:
Q  351 gttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttc---ccttttctttcaatctaaata 447  Q
    ||||| |||||| | ||||| | ||||| |||||||||||||||||||||| |||||  | |||||||  |||||    ||||||  ||| |||||||||    
T  1933966 gttctttttcactcatcgaggatgagtgattttagatcattttttgacctagaatcactcgtctgcatattttttttttcctttt--ttcgatctaaata 1933869  T
Q  448 agtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| |||| |||||||||||||| |||||||||||| |||||    
T  1933868 agttattttcacatatatcaagttttttcttttgtgtttttt 1933827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 482
Target Start/End: Original strand, 22571351 - 22571442
Alignment:
Q  390 ttttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgt 482  Q
    |||||| | ||| ||||| || |||||||| ||||||| | ||||||  |||||||||||||||||||||||||||||||| |||||||||||    
T  22571351 tttttttatctagaatcaaccatctgcatcttttttcc-tcttcttttgatctaaataagtgatttccacatatatcaagttttttcttttgt 22571442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 480
Target Start/End: Original strand, 14800976 - 14801158
Alignment:
Q  299 agccggccctaatttttt-agtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttga 397  Q
    ||||| |||||||||||| ||||| |||||||    ||| ||||||| ||||| |  |||||||| | | ||| ||  ||| |||||| | | |||||||    
T  14800976 agccgaccctaatttttttagtgacagaaactctgtcttttctctaatttttcttcatctttcactcattgaggagaggtgattttaggttaatttttga 14801075  T
Q  398 cctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
     ||| ||||| ||||||| ||  |||||||| ||||||||||||||||||||| |||| |||||| ||||||| |||| ||||    
T  14801076 tctagaatcacccctctgtatattttttcccctttctttcaatctaaataagtaattttcacatacatcaagttttttttttt 14801158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 470
Target Start/End: Complemental strand, 30608754 - 30608662
Alignment:
Q  377 tggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    ||||||||| |||||||| |||||| ||||| |||||| |||  ||||  |||||||||||||||||||| |||| ||| ||||||||||||||    
T  30608754 tggttttaggtcattttt-gacctagaatcacccctctacatatttttctccttttctttcaatctaaattagtggttttcacatatatcaagt 30608662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 489
Target Start/End: Original strand, 127536 - 127631
Alignment:
Q  391 tttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||||| ||||||||| |||||| |||| |||| || |||||||||   ||||||||||| ||| |||||||||||||| ||| |||||||| |||||    
T  127536 tttttgatctaaaatcacccctctacatctttttcccattttctttc---ctaaataagtggttttcacatatatcaagtttttccttttgtgtttttt 127631  T

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Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 311 - 395
Target Start/End: Complemental strand, 27097918 - 27097834
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatttttt 395  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||||||||| | |  || | |||||||||||| || ||||||    
T  27097918 ttttttagtgagagaaacttcacattctctctaagttttctttctctttcactcattcaggaagagtggttttaggtcttttttt 27097834  T

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Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 429 - 483
Target Start/End: Complemental strand, 11321658 - 11321604
Alignment:
Q  429 ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    ||||||||||||||||||||||| ||| ||||||||| |||| ||||||||||||    
T  11321658 ttttctttcaatctaaataagtggttttcacatatattaagttttttcttttgtg 11321604  T

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Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 307 - 470
Target Start/End: Complemental strand, 24228024 - 24227859
Alignment:
Q  307 ctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttg--acctaaaa 404  Q
    ||||||||||| || | |||||| |||||| |||| ||| |||  ||||  ||||  | || || |||||||||||||| |||||||||   || |||||    
T  24228024 ctaattttttaatgggcgaaactccaacttttctccaagctttatttcttcttcattcatcaaggaggagtggttttaggtcatttttttttacataaaa 24227925  T
Q  405 tcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    ||| |||||| |||| |||  ||| ||||||||||  |||||||||| ||| ||||||||||||||    
T  24227924 tcagccctctacatcttttcccccctttctttcaacttaaataagtggttttcacatatatcaagt 24227859  T

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Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 483
Target Start/End: Complemental strand, 26588665 - 26588603
Alignment:
Q  421 tttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    ||||| || ||||||| |||||||||||||| |||||||||||||||||| |||| |||||||    
T  26588665 ttttttccatttcttttaatctaaataagtggtttccacatatatcaagtttttttttttgtg 26588603  T

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Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 464
Target Start/End: Original strand, 31225967 - 31226026
Alignment:
Q  403 aatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatata 464  Q
    ||||| |||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||    
T  31225967 aatcacccctctgcatcctttttctcttt-ctttcaatc-aaataagtgatttccacatata 31226026  T

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Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 474
Target Start/End: Original strand, 31296671 - 31296755
Alignment:
Q  391 tttttgacctaaaatcatccctctgcatcctttttc-ccttttctttcaatctaaataagtgatttccacatatatcaagtgttt 474  Q
    ||||||||||| ||||||| ||||||||| |||||  ||  ||||||| ||  ||||||||||||| ||||||||||||||||||    
T  31296671 tttttgacctataatcatctctctgcatctttttttaccccttctttcgatacaaataagtgatttacacatatatcaagtgttt 31296755  T

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Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 489
Target Start/End: Complemental strand, 32327414 - 32327346
Alignment:
Q  421 tttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||| ||||||||||||||| |||||||||| ||| ||||| |||||||| ||| |||||||| |||||    
T  32327414 ttttccccttttctttcaatataaataagtggttttcacatctatcaagtttttccttttgtgtttttt 32327346  T

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Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 419 - 478
Target Start/End: Original strand, 678995 - 679054
Alignment:
Q  419 cctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctt 478  Q
    |||||||||  |||||||||||||||||||  ||||| |||||||||||||| |||||||    
T  678995 cctttttccactttctttcaatctaaataaccgattttcacatatatcaagttttttctt 679054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 476
Target Start/End: Complemental strand, 29255759 - 29255584
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    ||||||||| ||| |||||||||||| | ||||||||||| ||  | || ||||| |||   | ||||  ||  |||||||||  ||||| ||||| |||    
T  29255759 cggccctaactttctagtgagagaaattccaacttctctccaaactctctttctccttcgttcatcgaagagatgtggttttatgtcattctttgatcta 29255660  T
Q  402 aaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttc 476  Q
    ||||||| | ||| |||| |||| ||| ||||||||||||||||||||||| ||| |  ||||| ||||| |||||    
T  29255659 aaatcattcatctacatctttttcccccttttctttcaatctaaataagtggttttcttatataacaagttttttc 29255584  T

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Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 462
Target Start/End: Complemental strand, 7876248 - 7876164
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacata 462  Q
    |||||||| ||||| || |||||||||||||| || ||| |||| |||||| ||||  |||||||||||||||||||||| ||||||    
T  7876248 gtggttttggatcaattattgacctaaaatcacccatcttcatc-tttttctcttta-tttcaatctaaataagtgattttcacata 7876164  T

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Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 462
Target Start/End: Original strand, 33109708 - 33109792
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacata 462  Q
    |||||||| | ||| |||||||||||||||| ||| ||| |||| |||||| ||||  |||||||||||||||||||||| ||||||    
T  33109708 gtggttttgggtcaatttttgacctaaaatcgtccatcttcatc-tttttctcttta-tttcaatctaaataagtgattttcacata 33109792  T

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Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 444 - 489
Target Start/End: Complemental strand, 7976355 - 7976311
Alignment:
Q  444 aataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||    
T  7976355 aataagtgatttccacatatat-aagtgttttcttttgtgtttttt 7976311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 344
Target Start/End: Complemental strand, 9721830 - 9721785
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaa 344  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||||    
T  9721830 agccggccataattttctagtgagagaaactccaacttctctctaa 9721785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 468
Target Start/End: Complemental strand, 528598 - 528502
Alignment:
Q  374 gagtggttttagatcattttttgacctaaaatcatccc-tctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaa 468  Q
    |||||||||||| ||||| ||||| ||| ||||| ||| |||||||| ||||| ||||||||||| ||| |||||||||  ||| || |||||||||    
T  528598 gagtggttttaggtcattatttgatctataatcaccccatctgcatctttttttcccttttcttttaatttaaataagtatttttcatatatatcaa 528502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 443
Target Start/End: Complemental strand, 29320105 - 29320037
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttccc-ttttctttcaatcta 443  Q
    |||||||||| |||| |||||| ||| ||||| |||||| |||| |||||||| |||||||||||||||    
T  29320105 gtggttttaggtcatattttgatctagaatcacccctctacatcttttttccccttttctttcaatcta 29320037  T

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Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 462
Target Start/End: Complemental strand, 33740781 - 33740697
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacata 462  Q
    |||||||| | ||| || |||||||||||||| |||||| |||| |||||| || |  |||||||||||||||||||||| ||||||    
T  33740781 gtggtttttggtcaattcttgacctaaaatcacccctcttcatc-tttttctctcta-tttcaatctaaataagtgattttcacata 33740697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 407
Target Start/End: Complemental strand, 7976453 - 7976377
Alignment:
Q  330 tcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatca 407  Q
    ||||||| ||||||||||||| |||| |||||| | ||||| | | |||||||||| ||| ||||||||||| |||||    
T  7976453 tcaacttttctctaagttttctttctttttcactcatcgagcatgggtggttttaggtca-tttttgacctagaatca 7976377  T

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Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 462
Target Start/End: Original strand, 8496857 - 8496923
Alignment:
Q  394 ttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacata 462  Q
    ||||||| |||||| |||||| |||| |||||| ||||  |||||||||||||||||||||| ||||||    
T  8496857 ttgacctgaaatcacccctcttcatc-tttttctcttta-tttcaatctaaataagtgattttcacata 8496923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 412
Target Start/End: Complemental strand, 32328898 - 32328790
Alignment:
Q  304 gccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaa 403  Q
    |||||| |||| ||||||||||||||  ||||||||||||   |||| ||||| |||   | ||||| ||| |||||||||  ||| ||||||||||| |    
T  32328898 gccctagttttctagtgagagaaactctaacttctctctatactttctttctccttcgttcatcgaggaggggtggttttaagtcagtttttgacctata 32328799  T
Q  404 atcatccct 412  Q
    |||| ||||    
T  32328798 atcacccct 32328790  T

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Target: scaffold0445 (Bit Score: 91; Significance: 7e-44; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 305 - 495
Target Start/End: Original strand, 1119 - 1309
Alignment:
Q  305 ccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaa 404  Q
    ||||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||   | ||||| ||  |||||||||| ||||||||||||||| ||    
T  1119 ccctagttttttagtgagtgaaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaa 1218  T
Q  405 tcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||| |||||| | || |||||||||||||||||| |||||||||||| ||| |||||||||||||| || ||||||||| ||||| |||||    
T  1219 tcacccctctacttcttttttcccttttctttcactctaaataagtggttttcacatatatcaagttttctcttttgtgtttttttgtgat 1309  T

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Target: chr7 (Bit Score: 89; Significance: 1e-42; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 306 - 489
Target Start/End: Complemental strand, 30757132 - 30756948
Alignment:
Q  306 cctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaat 405  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||| |||||||||   | ||||| ||| |||||||||| | ||||||||||||| |||    
T  30757132 cctagttttttagtgggagaaacttcaacttctctctaaattttctttctctttcgttcatcgaggaggggtggttttaggtaattttttgacctagaat 30757033  T
Q  406 catccctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    || |||||| |||| ||||| |||||||||||||||||||||||||||||| ||||| ||||| || ||| |||||||| |||||    
T  30757032 cacccctctacatcttttttccccttttctttcaatctaaataagtgattttcacatctatcatgtttttccttttgtgtttttt 30756948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 299 - 495
Target Start/End: Complemental strand, 24351163 - 24350968
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||| |||||||||||||||||||||||||    ||||||| ||||||||| | |||| |||| | ||||| ||| ||| |||||| ||| ||||||||    
T  24351163 agccgaccctaattttttagtgagagaaactctgtcttctctttaagttttcttcctctctcactcatcgaggaggggtgattttaggtcaatttttgac 24351064  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||| ||||| |||| |||||||||||| || |||||||||||||||||||||||||| |||||| ||||||| |||||||| ||| ||||| |||||    
T  24351063 ctagaatcacccctgtgcatccttttttccctttctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgtgttttttagtgat 24350968  T

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Target: chr7; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 311 - 481
Target Start/End: Complemental strand, 19405062 - 19404892
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||||||||||||||| |||||||||||||| | ||| ||||| || |  | | ||||||| |||||||||| ||||||||||||||| ||||| ||    
T  19405062 ttttttagtgagagaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggtggttttaggtcattttttgacctagaatcaccc 19404963  T
Q  411 ctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttg 481  Q
    |||| |||| ||||| ||||||||||||||||||||||||| ||| |||||| ||||||| ||| ||||||    
T  19404962 ctctacatctttttttccttttctttcaatctaaataagtggttttcacataaatcaagtttttccttttg 19404892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 319 - 495
Target Start/End: Complemental strand, 37837758 - 37837582
Alignment:
Q  319 tgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcat 418  Q
    ||||||||||| ||||||||||||||  |||  ||||| |||   | | ||| ||| |||||||||| ||||||||||||||| ||||| |||||| |||    
T  37837758 tgagagaaactccaacttctctctaaactttatttctccttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctacat 37837659  T
Q  419 cctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    | ||||||||||||||||||||||||||||||| ||| ||||||||| |||| |||||||||||| ||||| |||||    
T  37837658 cttttttcccttttctttcaatctaaataagtggtttacacatatattaagttttttcttttgtgtttttttgtgat 37837582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 306 - 495
Target Start/End: Original strand, 22742716 - 22742904
Alignment:
Q  306 cctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaat 405  Q
    ||||||||||||||||||||||||     |||||||||||||||| | ||||||||  | ||||| ||| ||| |||||| ||| ||||| | ||| |||    
T  22742716 cctaattttttagtgagagaaactatgtattctctctaagttttcttcctctttcattcatcgaggaggggtgattttaggtcaatttttaatctagaat 22742815  T
Q  406 catccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    || ||||||||||| |||||||| |||||||||||||||||||||||||| |||||| ||||||| |||||||| ||  |||||||||||    
T  22742816 cacccctctgcatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaagt-ttttctttcgttttttttcgtgat 22742904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 310 - 492
Target Start/End: Complemental strand, 5078702 - 5078522
Alignment:
Q  310 attttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatc 409  Q
    |||||||||||||||||||||||||||||||||||||| || || |||||||| | |  || | | ||| |||||| ||||||||||||||| ||||| |    
T  5078702 attttttagtgagagaaacttcaacttctctctaagttctctttatctttcactcattaaggaagggtgattttaggtcattttttgacctagaatcacc 5078603  T
Q  410 cctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgt 492  Q
    ||||||||| |||| || |  || |||| |||||||||||||||||  ||||||||||||| |||||||||||| ||||||||    
T  5078602 cctctgcat-ctttctctccattatttcgatctaaataagtgatttttacatatatcaagt-ttttcttttgtgttttttcgt 5078522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 13797251 - 13797061
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    |||||| |||| |||| ||||||||||||||||||||||||| ||| ||||| ||||| |||   | ||||| | |  ||||||||| ||||||||| ||    
T  13797251 agccggtcctagttttctagtgagagaaacttcaacttctctttaaattttctttctcgttcgttcatcgaggatggatggttttaggtcattttttaac 13797152  T
Q  399 ctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| ||||| |||||| |||| |||| ||||||||||||||| ||||||||||||||  |||| |||||||| ||| |||||||| |||||    
T  13797151 ctagaatcacccctctacatctttttccccttttctttcaatttaaataagtgattttaacatctatcaagtttttccttttgtgtttttt 13797061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 302 - 495
Target Start/End: Original strand, 25067860 - 25068049
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||| ||||||||||||||||||| || |||||| |||||||||| || |||||||    ||||||| |||||||||||  |||| |||||||||     
T  25067860 cggccctagttttttagtgagagaaactccaccttctcactaagttttctttttctttcatttatcgagaatgagtggttttatgtcatcttttgacctt 25067959  T
Q  402 aaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
     ||||| || | |||||||||||| |  |||||||||||||||||||||||||||||||||||  ||||  ||||||||||||||||| |||||    
T  25067960 gaatcacccatttgcatccttttt-ctatttctttcaatctaaataagtgatttccacatata--aagt-ctttcttttgtgcttttttgtgat 25068049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 304 - 455
Target Start/End: Complemental strand, 8013780 - 8013628
Alignment:
Q  304 gccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaa 403  Q
    |||||| ||||||||||||||||||||||||||||||||||  |||| ||||  ||    | ||||| ||| |||||||||||||||||||||||||| |    
T  8013780 gccctagttttttagtgagagaaacttcaacttctctctaaactttctttcttctttgttcatcgaggaggggtggttttagatcattttttgacctaga 8013681  T
Q  404 atcatccctctgcatc-ctttttcccttttctttcaatctaaataagtgattt 455  Q
    |||| |||||| ||||  |||||||||||||||||| ||||||||||||||||    
T  8013680 atcacccctctacatctttttttcccttttctttcagtctaaataagtgattt 8013628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 334 - 479
Target Start/End: Original strand, 35132757 - 35132901
Alignment:
Q  334 cttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttc 433  Q
    ||||||||||||||||| | ||||||||| | ||||| ||| ||| |||||| ||| ||||||||||| ||||| |||||| |||| |||||||| ||||    
T  35132757 cttctctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacccctctacatcttttttcccctttc 35132856  T
Q  434 tttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
    ||| |||||||||||||||||| |||||| ||||||| ||||||||    
T  35132857 ttttaatctaaataagtgattttcacatacatcaagt-ttttcttt 35132901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 312 - 488
Target Start/End: Complemental strand, 12141615 - 12141437
Alignment:
Q  312 tttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccc 411  Q
    ||||||| |||||||||| ||||||||||||||  |||| ||||| |||   | ||||  ||| |||||||||| |||||||||||| || ||||| |||    
T  12141615 tttttagagagagaaactccaacttctctctaaactttctttctccttcgttcatcgaagaggggtggttttaggtcattttttgacatagaatcacccc 12141516  T
Q  412 tctgcatcctttttcccttttct--ttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    ||| |||| |||||||||||| |  ||||||||||||||||| ||| ||||| |||||||| |||||||||||| ||||    
T  12141515 tctacatcttttttcccttttttatttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttt 12141437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 311 - 489
Target Start/End: Complemental strand, 34899912 - 34899736
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    |||||||||| |||||||| ||||||||||||||  |||| ||||| |||   |  |||    |||||||||||| ||||||||||||||| ||||| ||    
T  34899912 ttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcaccgat---gagtggttttaggtcattttttgacctagaatcaccc 34899816  T
Q  411 ctctgcatccttttt-cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||| |||| ||||| |||||||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||| |||||    
T  34899815 ctctacatctttttttcccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttt 34899736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 302 - 489
Target Start/End: Complemental strand, 9450454 - 9450266
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    ||||||||||||| |||||||||||||| |||||||| | |||  |||| ||||| |||   | ||||| |||  ||||||||| |||||||||||||||    
T  9450454 cggccctaattttctagtgagagaaactccaacttctttttaaactttctttctccttcgttcatcgaggagggatggttttaggtcattttttgaccta 9450355  T
Q  402 aaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
     ||||| || ||| |||| | |||||| ||||||||||||||||||||||||||| ||||| |||| ||| | | |||||||| |||||    
T  9450354 gaatcacccatctacatcttgtttccccttttctttcaatctaaataagtgattttcacatctatctagtttctccttttgtgtttttt 9450266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 302 - 495
Target Start/End: Complemental strand, 41554440 - 41554251
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||| |||||||||||||||||||  ||||| ||| ||| || |  ||||||  ||| | ||||  | || ||||||||| ||||||||||| |||    
T  41554440 cggccctagttttttagtgagagaaactctaacttttctttaaattctgtttctct--cactcatcgaagatgaatggttttaggtcattttttgatcta 41554343  T
Q  402 aaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
     ||||| |  | |||||   ||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  41554342 gaatcaccattttgcata--ttttctcatttctttcaatctaaataagggatttccacatatatcaagtgttttcttttgtgttttttcgtgat 41554251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 303 - 495
Target Start/End: Complemental strand, 41553749 - 41553561
Alignment:
Q  303 ggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaa 402  Q
    ||||||| |||||||||||||||||||  ||||| ||| ||| || |  ||||||  ||| | ||||  | || ||||||||| ||||||||||| |||     
T  41553749 ggccctagttttttagtgagagaaactctaacttttctttaaattctgtttctct--cactcatcgaagatgaatggttttaggtcattttttgatctag 41553652  T
Q  403 aatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||||| |  | |||||   ||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  41553651 aatcaccattttgcata--ttttctcatttctttcaatctaaataagggatttccacatatatcaagtgttttcttttgtgttttttcgtgat 41553561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 303 - 495
Target Start/End: Complemental strand, 41554094 - 41553906
Alignment:
Q  303 ggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaa 402  Q
    ||||||| |||||||||||||||||||  ||||| ||| ||| || |  ||||||  ||| | ||||  | || ||||||||| ||||||||||| |||     
T  41554094 ggccctagttttttagtgagagaaactctaacttttctttaaattctgtttctct--cactcatcgaagatgaatggttttaggtcattttttgatctag 41553997  T
Q  403 aatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||||| |  | |||||   ||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  41553996 aatcaccattttgcata--ttttctcatttctttcaatctaaataagggatttccacatatatcaagtgttttcttttgtgttttttcgtgat 41553906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 311 - 489
Target Start/End: Original strand, 47590097 - 47590273
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||||||||||||| | |||||||||||||| ||||| ||||| |||   | | ||| ||| ||| |||||| |||||||| || ||| ||||| ||    
T  47590097 ttttttagtgagagaaattccaacttctctctaaattttctttctcattcgttcatagaggaggggtgattttaggtcattttt-gaactagaatcaccc 47590195  T
Q  411 ctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||| |||  ||||||||| ||||||||||||||||||||| ||| |||||||||||||| ||| |||||||| |||||    
T  47590196 ctctacatt-tttttccctattctttcaatctaaataagtggttttcacatatatcaagtttttccttttgtgtttttt 47590273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 334 - 479
Target Start/End: Complemental strand, 1749426 - 1749284
Alignment:
Q  334 cttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttc 433  Q
    ||||||||||||||||| | ||||||||| | ||||| ||| ||| |||||| ||| ||||||||||| ||||| ||| || |||| ||||||||||| |    
T  1749426 cttctctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatca-cccgcttcatcttttttcccttt-c 1749329  T
Q  434 tttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
    |||||||||||||||||||||| |||||| ||||||| ||||||||    
T  1749328 tttcaatctaaataagtgattttcacatacatcaagt-ttttcttt 1749284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 310 - 495
Target Start/End: Original strand, 28476005 - 28476187
Alignment:
Q  310 attttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatc 409  Q
    ||||||||||||||||||||     |||||||||||||||| | |||||||||   ||||| ||| ||| |||||| ||| ||||||||||| ||||| |    
T  28476005 attttttagtgagagaaactctttattctctctaagttttcttcctctttcacatatcgaggaggggtgattttaggtcaatttttgacctagaatcacc 28476104  T
Q  410 cctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||   ||||  ||||| | | |||||||||||||||||||||||||| |||||| ||||||| |||||||||||| |||||||||||    
T  28476105 cc---gcatatttttttctcctttctttcaatctaaataagtgattttcacatacatcaagt-ttttcttttgtgttttttcgtgat 28476187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 311 - 495
Target Start/End: Original strand, 11343577 - 11343766
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctct----ctaa--gttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaa 404  Q
    |||| |||||||||||||||||||||||||    ||||  |||||| ||||||||| | | ||||||||| ||| |||||| | ||||||||||||| ||    
T  11343577 ttttatagtgagagaaacttcaacttctctaaaactaaaagttttctttctctttcgctcatcgagaaggggtgattttagtttattttttgacctagaa 11343676  T
Q  405 tcatccctctgcatcctttttcccttttctttcaatctaaataagtga-tttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||| |||| |||||  ||||| || ||||||||||||||||||||||| |||  |||| |||||| | |||||||||||| |||||||||||    
T  11343677 tcacccct-tgcat-tttttttccatttctttcaatctaaataagtgatttttaacatctatcaaatattttcttttgtgttttttcgtgat 11343766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 312 - 488
Target Start/End: Original strand, 48061206 - 48061384
Alignment:
Q  312 tttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccc 411  Q
    ||||||| |||||||||| ||||||||||||||  |||| || || |||   | ||||| ||  |||||||||| |||||||||||| || ||||| |||    
T  48061206 tttttagagagagaaactccaacttctctctaaactttctttatccttcgttcatcgaggagaggtggttttaggtcattttttgacttagaatcacccc 48061305  T
Q  412 tctgcatcctttttccc--ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
     || |||  ||||||||  ||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||| ||||    
T  48061306 actacatattttttcccctttttctttcaatctaaataagtggttttcacatctatcaagttttttcttttgtgttttt 48061384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 299 - 480
Target Start/End: Complemental strand, 39329113 - 39328931
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttg-a 397  Q
    |||||||||||||||| ||||||||||||||  ||||| | |||||  |||| ||||| ||    | ||||| |||||||| ||||| || ||||||  |    
T  39329113 agccggccctaattttctagtgagagaaactcaaacttttttctaaactttctttctcctttgttcatcgaggaggagtgggtttaggtcttttttttta 39329014  T
Q  398 cctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
    |||| ||| | || |||||||| |||||||||||||||||||| |||||||||| ||| |||| ||||||||| |||||||||    
T  39329013 cctagaattacccatctgcatcttttttcccttttctttcaatttaaataagtggttttcacacatatcaagttttttctttt 39328931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 299 - 446
Target Start/End: Original strand, 19296649 - 19296797
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||| ||||| |||||||||| |||||||| ||||||| |||||| ||||  || || |||   | ||||| ||| |||||||||| ||||||||||||    
T  19296649 agccgaccctagttttttagtgggagaaactccaacttccctctaatttttttttgtccttcgttcatcgaggaggggtggttttaggtcattttttgac 19296748  T
Q  399 ctaaaatcatccctctgcatccttttt-cccttttctttcaatctaaat 446  Q
    ||| ||||| |||||| |||| ||||| |||||||||||||||||||||    
T  19296749 ctagaatcacccctctacatcttttttccccttttctttcaatctaaat 19296797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 489
Target Start/End: Original strand, 40992958 - 40993144
Alignment:
Q  304 gccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaa 403  Q
    |||||| |||| ||||| |||||||| ||||||||||||||  ||| |||||  |||   | ||||| | | || ||||||| |||||||||||||||||    
T  40992958 gccctagttttctagtgggagaaactccaacttctctctaaactttagttcttcttcgttcatcgaggatg-gtagttttaggtcattttttgacctaaa 40993056  T
Q  404 atcatccctctgcatcctttttccc--ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||  ||||| |||| ||||| ||  ||||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||| |||||    
T  40993057 atcactcctctacatctttttttccacttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttt 40993144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 302 - 468
Target Start/End: Original strand, 4529853 - 4530020
Alignment:
Q  302 cggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgaccta 401  Q
    |||||||| |||| ||||||||||||||||| ||||||||||||| ||| ||||| ||||  | || |  ||  ||| |||||| |||||||||||| ||    
T  4529853 cggccctagttttctagtgagagaaacttcaccttctctctaagtcttctttctccttcattcatcaaagagaggtgattttaggtcattttttgacata 4529952  T
Q  402 aaatcatccctctgcatcctttttccct-tttctttcaatctaaataagtgatttccacatatatcaa 468  Q
     || |||||| || |||| ||||||||| ||||||||||||||| |||||  ||| ||||||||||||    
T  4529953 gaaccatcccgctacatcttttttccctctttctttcaatctaagtaagtatttttcacatatatcaa 4530020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 311 - 483
Target Start/End: Original strand, 42978391 - 42978565
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    |||| ||||||||||||||  |||||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| ||||||||||||||| ||||| |     
T  42978391 ttttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacca 42978490  T
Q  411 ctctgcatccttt--ttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    |||| |||| |||  | ||||||||  |||||||||||||||| ||| ||||||||| |||| ||| ||||||||    
T  42978491 ctctacatctttttctccccttttcgatcaatctaaataagtggttttcacatatataaagtttttccttttgtg 42978565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 317 - 489
Target Start/End: Complemental strand, 48317114 - 48316941
Alignment:
Q  317 agtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgc 416  Q
    ||||| |||||||  ||||||||||||| ||| | ||||| |||   | || || ||| |||||||||| |||||||| |||||| ||||| |||||| |    
T  48317114 agtgaaagaaactctaacttctctctaaatttgctttctccttcgttcatcaaggaggggtggttttaggtcatttttggacctagaatcacccctctac 48317015  T
Q  417 atcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| |||| ||| |||||||||||| |||||||||| ||| ||||| |||||| | |||||||||||| |||||    
T  48317014 atctttttcccccttttctttcaatttaaataagtggttttcacatctatcaaattttttcttttgtgtttttt 48316941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 303 - 495
Target Start/End: Complemental strand, 39171908 - 39171714
Alignment:
Q  303 ggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaa 402  Q
    ||||||| |||| |||||||| ||||| |||| | |||||||  |||| ||||  |||   | ||||| ||| |||||| ||| |||||||||||||||     
T  39171908 ggccctagttttctagtgagataaactccaacgtatctctaaactttctttcttcttcgttcatcgaggaggggtggttgtaggtcattttttgacctag 39171809  T
Q  403 aatcatccctctgcatccttttt--cccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||||| |||||| |||| |||||  || ||||||||| ||||||||||||| ||| || || |||||||| ||| |||||||| ||||| |||||    
T  39171808 aatcacccctctacatcttttttttcctttttctttcgatctaaataagtggttttcatatctatcaagtttttccttttgtgtttttttgtgat 39171714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 468
Target Start/End: Original strand, 24770058 - 24770195
Alignment:
Q  331 caacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttccctt 430  Q
    ||||||||||||||  |||| ||||| |||   | |||||| || ||| |||||| ||||||| |||| || |||||||| ||| |||| |||||  |||    
T  24770058 caacttctctctaaactttctttctcattcgttcatcgagacggggtgattttaggtcattttatgacttagaatcatccatctacatcttttttttctt 24770157  T
Q  431 ttctttcaatctaaataagtgatttccacatatatcaa 468  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  24770158 ttctttcaatctaaataagtggttttcacatatatcaa 24770195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 377 - 489
Target Start/End: Complemental strand, 45350044 - 45349932
Alignment:
Q  377 tggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttc 476  Q
    ||||||||| ||||||||||||||| ||||| || ||| | || ||||||| |||||||||||| |||||||||| ||| ||| |||| || || |||||    
T  45350044 tggttttaggtcattttttgacctagaatcacccatctacttcttttttcctttttctttcaatttaaataagtggttttcacgtataccaggttttttc 45349945  T
Q  477 ttttgtgcttttt 489  Q
    ||||||| |||||    
T  45349944 ttttgtgtttttt 45349932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 391 - 483
Target Start/End: Complemental strand, 35665360 - 35665267
Alignment:
Q  391 tttttgacctaaaatcatccctctgcatcctttttccct-tttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    ||||||||||| ||||| ||||||||||| || ||  || |||||||| |||||||||||||||||| | ||||||||| ||||||||||||||    
T  35665360 tttttgacctagaatcacccctctgcatctttattttctctttctttcgatctaaataagtgatttcgaaatatatcaaatgttttcttttgtg 35665267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 376 - 467
Target Start/End: Original strand, 25255086 - 25255176
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatca 467  Q
    |||||||||| ||||||||||||||| ||||| |||| ||||| ||||||||| ||||||||||| |||||||||  ||| |||| ||||||    
T  25255086 gtggttttaggtcattttttgacctataatcacccctttgcat-ctttttcccctttctttcaatttaaataagttgttttcacacatatca 25255176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 391 - 470
Target Start/End: Complemental strand, 26610971 - 26610893
Alignment:
Q  391 tttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
    ||||||||||||||||| || | |||||| |||||||| ||||||| ||| |||||||||| ||||||||||||||||||    
T  26610971 tttttgacctaaaatcacccttatgcatc-tttttcccctttctttgaatttaaataagtggtttccacatatatcaagt 26610893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 409 - 476
Target Start/End: Original strand, 48930661 - 48930728
Alignment:
Q  409 ccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttc 476  Q
    |||||| |||| |||||||| |||||||||||||||||||||||||| |||||| ||||||| |||||    
T  48930661 ccctctacatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaagttttttc 48930728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 480
Target Start/End: Complemental strand, 25287494 - 25287325
Alignment:
Q  306 cctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaat 405  Q
    ||||||||||||||||||||||||  ||||||||| ||| ||||| ||||| ||||  ||||||  ||  |||||||||  | ||| ||||||     ||    
T  25287494 cctaattttttagtgagagaaactataacttctctataaattttctttctccttcattcgtcgaagagaggtggttttaagttattatttgac-----at 25287400  T
Q  406 catccctctgcatcctttttccc--ttttctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
    ||||||| | ||| |||||||||  |||||||| |||||||||||||||||| ||| ||||| |||| |||||||||    
T  25287399 catccctttacat-ctttttcccttttttcttttaatctaaataagtgattttcacgtatattaagt-ttttctttt 25287325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 478
Target Start/End: Original strand, 3394256 - 3394422
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||||||||||||| | ||||||  | ||||||| || |||| |||||| | | ||| ||  |||||||||  |||||||| ||| || ||||| |     
T  3394256 ttttttagtgagagaaattccaactttccactaagttctctttctttttcactctttgaggagtggtggttttacgtcatttttggacatataatcacct 3394355  T
Q  411 ctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttctt 478  Q
     | || || ||||||||| |||||||| ||||||||||||||||| ||| ||||| |||| |||||||    
T  3394356 atttgtat-ctttttcccctttctttcgatctaaataagtgattttcacgtatatgaagttttttctt 3394422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 483
Target Start/End: Original strand, 46699933 - 46700000
Alignment:
Q  416 catcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    |||| |||||||| ||||||||| |||||||||||| ||||||||| |||||||| ||| ||||||||    
T  46699933 catcatttttcccctttctttcattctaaataagtggtttccacatgtatcaagtttttccttttgtg 46700000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 488
Target Start/End: Complemental strand, 3224725 - 3224549
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatcc 410  Q
    ||||||||||||||||| | |||||| | ||||| ||||| ||||||||||| | ||||  | | |||||||||| ||||||||   | || |||||  |    
T  3224725 ttttttagtgagagaaattccaacttttttctaaattttctttctctttcactcttcgaagatgggtggttttaggtcatttttat-catagaatcactc 3224627  T
Q  411 ctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    |||  |||| |||||| |||||||||  || |||||||  |||| ||||  |||||||||||||| ||||||| ||||    
T  3224626 ctcaacatcttttttctcttttcttttgatttaaataaccgattaccactgatatcaagtgttttgttttgtgttttt 3224549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 495
Target Start/End: Original strand, 11653728 - 11653846
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttt- 474  Q
    |||| ||||| | ||||||||||||| |||||||| |||||||  |||||   |||| ||  |||||||||||||||||| ||||||||  |||| |||     
T  11653728 gtggctttaggttattttttgacctagaatcatccatctgcattttttttttatttttttaaaatctaaataagtgattttcacatata--aagttttta 11653825  T
Q  475 tcttttgtgctttttcgtgat 495  Q
    | |||||||||||||||||||    
T  11653826 ttttttgtgctttttcgtgat 11653846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 483
Target Start/End: Complemental strand, 38051367 - 38051203
Alignment:
Q  318 gtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccctctgca 417  Q
    |||| ||| |||||| ||||||| |||||| || ||||  ||||| | |  || ||| |||||||||| |||| |||| ||||| ||||| || ||| ||    
T  38051367 gtgatagagacttcaccttctctttaagttctctttcttcttcactcattaaggaggggtggttttaggtcatattttaacctagaatcacccatctaca 38051268  T
Q  418 tcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg 483  Q
    || |||| |||||| |||| |||||||||| ||| |||| | ||||||||||| |||| |||||||    
T  38051267 tcattttccccttt-cttttaatctaaatatgtggtttcaatatatatcaagtttttttttttgtg 38051203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 460
Target Start/End: Complemental strand, 5348896 - 5348747
Alignment:
Q  306 cctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaat 405  Q
    |||| ||||||||||| |||||||||| ||||| | ||||||||| ||||| || |  | ||||| ||  ||| |||||| | | ||||||||||| |||    
T  5348896 cctagttttttagtgaaagaaacttcatcttctttttaagttttctttctcctttattcatcgaggagaggtg-ttttaggtaagtttttgacctagaat 5348798  T
Q  406 catccctctgcatcctttttcccttttctttcaatctaaataagtgatttccaca 460  Q
    || |||||   ||| ||||||| |||||||||||| |||||||||||||| ||||    
T  5348797 cacccctc---atcttttttcc-ttttctttcaatttaaataagtgattttcaca 5348747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 495
Target Start/End: Complemental strand, 24069596 - 24069521
Alignment:
Q  420 ctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtg-ctttttcgtgat 495  Q
    |||||||||||| ||||| ||||| ||||||||||||||||  ||| |||| |||||||||||| ||||||||||||    
T  24069596 ctttttcccttt-ctttcgatctatataagtgatttccacacgtataaagttttttcttttgtgtctttttcgtgat 24069521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 390 - 476
Target Start/End: Original strand, 5775074 - 5775162
Alignment:
Q  390 ttttttgacctaaaatcatccctctgcatcctttttccct--tttctttcaatctaaataagtgatttccacatatatcaagtgttttc 476  Q
    |||||| ||||| ||||| |||||| ||||  |||||||   |||||||  || ||||||||||||||||||||||||||||| |||||    
T  5775074 tttttttacctagaatcacccctctccatctattttcccccctttcttttgatataaataagtgatttccacatatatcaagttttttc 5775162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 407
Target Start/End: Complemental strand, 49149138 - 49149043
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatca 407  Q
    ||||||||||| |||||||| |  |||||||||  ||||| ||||| ||| | | ||||| ||| |||||||||  |||||||||||||||||||||    
T  49149138 ttttttagtgacagaaactttacattctctctatattttcattctccttcgctcatcgagtagg-gtggttttaagtcattttttgacctaaaatca 49149043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 480
Target Start/End: Original strand, 38798636 - 38798739
Alignment:
Q  377 tggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttc 476  Q
    ||||||||| ||||| |||||| || ||||| || ||| ||||  |||||| |||||||||||| |||||||||| ||| || | |||| |||| ||||     
T  38798636 tggttttaggtcattctttgacatagaatcacccatctacatctcttttcctttttctttcaatttaaataagtggttttcaaacatattaagtttttta 38798735  T
Q  477 tttt 480  Q
    ||||    
T  38798736 tttt 38798739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 480
Target Start/End: Original strand, 21266322 - 21266368
Alignment:
Q  434 tttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
    |||||||||||||||||||||| |||||| ||| || ||||||||||    
T  21266322 tttcaatctaaataagtgattttcacatagatctagggttttctttt 21266368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 299 - 340
Target Start/End: Original strand, 24350695 - 24350737
Alignment:
Q  299 agccggccctaatttt-ttagtgagagaaacttcaacttctct 340  Q
    |||||||||||||||| ||||||||||||||| ||||||||||    
T  24350695 agccggccctaatttttttagtgagagaaactccaacttctct 24350737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 464
Target Start/End: Complemental strand, 44311985 - 44311951
Alignment:
Q  430 tttctttcaatctaaataagtgatttccacatata 464  Q
    |||||||||||||||||||||| ||||||||||||    
T  44311985 tttctttcaatctaaataagtggtttccacatata 44311951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 462
Target Start/End: Original strand, 46821888 - 46821972
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacata 462  Q
    |||||||| | ||| || ||||||| |||||| |||||| |||| |||||| ||||  |||||||||||||||||||||| ||||||    
T  46821888 gtggttttgggtcaattcttgacctgaaatcacccctcttcatc-tttttctcttta-tttcaatctaaataagtgattttcacata 46821972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 344
Target Start/End: Complemental strand, 45350500 - 45350467
Alignment:
Q  311 ttttttagtgagagaaacttcaacttctctctaa 344  Q
    |||| |||||||||||||||||||||||||||||    
T  45350500 ttttctagtgagagaaacttcaacttctctctaa 45350467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 466
Target Start/End: Complemental strand, 49148289 - 49148244
Alignment:
Q  421 tttttcccttttctttcaatctaaataagtgatttccacatatatc 466  Q
    |||||||| |||||||||| ||||||||||| ||| ||||||||||    
T  49148289 tttttcccctttctttcaaactaaataagtggttttcacatatatc 49148244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 438 - 466
Target Start/End: Complemental strand, 286720 - 286692
Alignment:
Q  438 aatctaaataagtgatttccacatatatc 466  Q
    |||||||||||||||||||||||||||||    
T  286720 aatctaaataagtgatttccacatatatc 286692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 294 - 489
Target Start/End: Original strand, 15256 - 15451
Alignment:
Q  294 tgttgagccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcatttt 393  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| |||||||    
T  15256 tgtttagccggccctagttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcttcgaggaggggtggttttaggtcatttt 15355  T
Q  394 ttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||||||| ||||| |||||| |||| |||| |||||||||||||||||||||||||| ||| || || | |||||| ||| |||||||| |||||    
T  15356 ttgacctagaatcacccctctacatctttttccccttttctttcaatctaaataagtggttttcatatctttcaagtttttccttttgtgtttttt 15451  T

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Target: scaffold0888 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 305 - 479
Target Start/End: Complemental strand, 1988 - 1815
Alignment:
Q  305 ccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaa 404  Q
    |||||||||||||||||||||||||    |||||||||| |||||| | |||||||||   ||||| ||| ||| | |||| ||| ||||||||||| ||    
T  1988 ccctaattttttagtgagagaaactctgtcttctctctacgttttcttcctctttcacttatcgaggaggggtgatattaggtcaatttttgacctagaa 1889  T
Q  405 tcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttt 479  Q
    ||| | ||||||||| |||||||| |||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  1888 tcacctctctgcatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaagt-ttttcttt 1815  T

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Target: scaffold0088 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 299 - 495
Target Start/End: Original strand, 50555 - 50751
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||| ||||| |||||||| |||||||| |||||  |||| ||||| |||   | | ||| ||| ||| |||||| ||| ||||||||    
T  50555 agccggccctagttttctagtgggagaaactccaacttctttctaaactttctttctccttcgttcattgaggaggggtgattttaggtcactttttgac 50654  T
Q  399 ctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
    ||| |||||||||||| |||| |||||||| ||||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||| |||||||||||    
T  50655 ctagaatcatccctctacatcttttttccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtg-tttttcgtgat 50751  T

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Target: scaffold0017 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 299 - 495
Target Start/End: Complemental strand, 33068 - 32871
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    |||| |||||| |||| ||||||||||||||  |||||||||||||  |||| ||||  |||     ||||| |||||||||||||| ||||||||||||    
T  33068 agcccgccctagttttctagtgagagaaactctaacttctctctaaactttctttcttcttcgtttatcgaggaggagtggttttaggtcattttttgac 32969  T
Q  399 ctaaaatcatccctctgcatcctttttccc-ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtgat 495  Q
     || ||||| |||||| |||| ||| |||| ||||||||||||||||||||||| ||| ||||| |||||||| ||| |||||||| ||||| |||||    
T  32968 atagaatcacccctctacatcttttgtccccttttctttcaatctaaataagtggttttcacatctatcaagtttttccttttgtgtttttttgtgat 32871  T

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Target: scaffold0884 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 312 - 488
Target Start/End: Complemental strand, 2279 - 2102
Alignment:
Q  312 tttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccc 411  Q
    ||||||| |||||||||| ||||||||||||||  |||  ||||| |||   | ||||| |||||||||||||  ||||||||||| ||| ||||| |||    
T  2279 tttttagagagagaaactccaacttctctctaaactttttttctccttcgttcatcgaggaggagtggttttaagtcattttttgatctagaatcacccc 2180  T
Q  412 tctgcatcctttttccc--ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    ||| |||| ||||||||  ||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||| ||||    
T  2179 tctacatcttttttcccctttttctttcaatctaaataagtggttt-cacatctatcaagttttttcttttgtgttttt 2102  T

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Target: scaffold0026 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 299 - 489
Target Start/End: Complemental strand, 72184 - 71993
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||  |||| ||||| |||   | ||||| ||| |||||||||| ||||||||||||    
T  72184 agccggccctagttttctagtgggagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgac 72085  T
Q  399 ctaaaatcatccctctgcatcctttt-tcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||| ||||| |  ||| |||| ||||  |||||||||||||||| ||||||||| ||| ||||| |||||||| ||| | |||||| |||||    
T  72084 ctagaatcaccattcttcatctttttcccccttttctttcaatccaaataagtggttttcacatctatcaagtttttccatttgtgtttttt 71993  T

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Target: scaffold0603 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 312 - 494
Target Start/End: Original strand, 7500 - 7680
Alignment:
Q  312 tttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaatcatccc 411  Q
    ||||||||||| |||||| |  ||||||||||||||||| ||||| || |  | ||||| |||  ||||||||| ||||||||||||||| |||||  |     
T  7500 tttttagtgagggaaactccg-cttctctctaagttttctttctcctttattcatcgaggagggatggttttaggtcattttttgacctagaatcactca 7598  T
Q  412 tctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttttcgtga 494  Q
    |||||||| |||| ||| ||||||||||| |||||||||| ||| |||||||||||||| ||| |||||||| ||||| ||||    
T  7599 tctgcatc-ttttacccctttctttcaatttaaataagtggttttcacatatatcaagtttttccttttgtgtttttttgtga 7680  T

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Target: scaffold0064 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 306 - 470
Target Start/End: Complemental strand, 19348 - 19190
Alignment:
Q  306 cctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgacctaaaat 405  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| | ||||| ||| |||||||||  ||  ||||||||||| |||    
T  19348 cctaattttttagtgagagaaactccaacttctctctaa-ttttctttctctttcactcatcgaggaggggtggttttatgtc-gtttttgacctagaat 19251  T
Q  406 catccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagt 470  Q
     | ||||||||||  ||  |||||||  |||| |||||||||||| ||||| ||| |||||||||    
T  19250 tacccctctgcat--ttcatcccttt--tttcgatctaaataagttatttcaacacatatcaagt 19190  T

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Target: scaffold0039 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 376 - 479
Target Start/End: Original strand, 92946 - 93049
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    |||||||||| | ||||||||||||| ||||||||   |||||| |||||| | |||||||||||||||||||||||||| | | |||||||||| ||||    
T  92946 gtggttttaggttattttttgacctagaatcatcctcgtgcatcttttttctcctttctttcaatctaaataagtgatttacgcttatatcaagtttttt 93045  T
Q  476 cttt 479  Q
    ||||    
T  93046 cttt 93049  T

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Target: scaffold0219 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 299 - 480
Target Start/End: Complemental strand, 15158 - 14976
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttctctttcacccgtcgagaaggagtggttttagatcattttttgac 398  Q
    ||||| |||||  ||| |||||||||||||| ||| ||||||||||  |||| ||||| ||||  | ||||| | | ||||  |||| | ||||||||||    
T  15158 agccgaccctagatttctagtgagagaaactccaatttctctctaaactttctttctccttcattcatcgaggatgtgtggggttaggttattttttgac 15059  T
Q  399 ctaaaatcatccctctgcatcctttttccctttt-ctttcaatctaaataagtgatttccacatatatcaagtgttttctttt 480  Q
    ||| ||||| | |||| |||| |||||||||||| ||||||||||||||||||  ||| ||  |||||||||| |||||||||    
T  15058 ctagaatcaccactctacatcttttttccctttttctttcaatctaaataagtcgttttcaagtatatcaagttttttctttt 14976  T

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Target: scaffold0049 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 468
Target Start/End: Complemental strand, 71533 - 71435
Alignment:
Q  368 gagaaggagtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatca 467  Q
    ||||||| |||||||||| |||||||| |||||||||||| |||||| |||  |||| | |||||||||||||||||| ||||| ||| |||||||||||    
T  71533 gagaaggggtggttttaggtcattttt-gacctaaaatcacccctctacata-ttttcctcttttctttcaatctaaacaagtggttttcacatatatca 71436  T

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Target: scaffold0634 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 299 - 489
Target Start/End: Original strand, 8283 - 8472
Alignment:
Q  299 agccggccctaattttttagtgagagaaacttcaacttctctctaagttttcgttc---tct-ttcacccgtcgagaaggagtggttttagatcattttt 394  Q
    |||| |||||| ||||||||||||||| |||||||||||||| |||  |||| |||   ||| ||||    ||||| ||| |||||||||  | ||||||    
T  8283 agcctgccctagttttttagtgagagacacttcaacttctctataaactttctttcaaatctgttca----tcgaggaggggtggttttaagttattttt 8378  T
Q  395 tgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    ||||||| ||||| |||||| || |||||||  ||||||||| || ||||||||||| |||  ||||||||| ||| ||| |||||||| |||||    
T  8379 tgacctataatcacccctctaca-cctttttttcttttcttttaagctaaataagtggtttttacatatatccagtttttgcttttgtgattttt 8472  T

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Target: scaffold0492 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 376 - 495
Target Start/End: Original strand, 12762 - 12880
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgtttt 475  Q
    |||||||||| ||||||||||||||| ||||| | || | |||  ||||  |||||||| ||||| |||||||||| ||| |||||| |||||||||||     
T  12762 gtggttttaggtcattttttgacctagaatcaccgctatacatatttttctccttttctatcaatttaaataagtggttttcacatacatcaagtgtttc 12861  T
Q  476 cttttgtgctttttcgtgat 495  Q
     ||||||| |||||||||||    
T  12862 gttttgtg-tttttcgtgat 12880  T

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Target: scaffold0262 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 390 - 488
Target Start/End: Complemental strand, 2047 - 1948
Alignment:
Q  390 ttttttgacctaaaatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    |||||| |||||||||||  | ||| |||| ||||||| ||||||||||||| |||||||||| ||| |||||||||||||| ||| |||||||| ||||    
T  2047 tttttttacctaaaatcactcatctacatcttttttcctcttttctttcaatttaaataagtggtttgcacatatatcaagtttttccttttgtgttttt 1948  T

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Target: scaffold0136 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 416 - 489
Target Start/End: Original strand, 37933 - 38006
Alignment:
Q  416 catcctttttcccttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgcttttt 489  Q
    |||| |||||||| |||||||||||||||||||||| ||| ||||||| |||||| ||| |||||||| |||||    
T  37933 catcttttttcccctttctttcaatctaaataagtggttttcacatatgtcaagtttttccttttgtgtttttt 38006  T

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Target: scaffold0136; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 429 - 488
Target Start/End: Complemental strand, 10230 - 10171
Alignment:
Q  429 ttttctttcaatctaaataagtgatttccacatatatcaagtgttttcttttgtgctttt 488  Q
    ||||||||| ||||||||||||| ||| |||||||||||||| ||| |||||||| ||||    
T  10230 ttttctttccatctaaataagtggttttcacatatatcaagtttttccttttgtgttttt 10171  T

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Target: scaffold0121 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 483
Target Start/End: Complemental strand, 31524 - 31405
Alignment:
Q  366 tcgagaaggagtggttttagatcatt-ttttgacctaaaatcatccctctgcatcctttttcc-cttttctttcaatctaaataagtgatttccacatat 463  Q
    ||||| ||||||| |||||  ||||| |||| ||| |||||||  ||||| |||| ||||||| ||||||||||||| |||||||||  ||| |||||||    
T  31524 tcgagcaggagtgattttatgtcattgtttttaccaaaaatcactcctctacatcttttttcctcttttctttcaatataaataagtagttttcacatat 31425  T
Q  464 atcaagtgttttcttttgtg 483  Q
    ||||||| ||| ||||||||    
T  31424 atcaagtttttccttttgtg 31405  T

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Target: scaffold0347 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 411 - 465
Target Start/End: Original strand, 5894 - 5948
Alignment:
Q  411 ctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatat 465  Q
    ||||||||| |||||| | ||||||||||||||||||||||||||||||| ||||    
T  5894 ctctgcatcttttttctcctttctttcaatctaaataagtgatttccacacatat 5948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 25654 - 25604
Alignment:
Q  294 tgttgagccggccctaattttttagtgagagaaacttcaacttctctctaa 344  Q
    |||| ||||||||||| |||| ||||||||||||||||||||| |||||||    
T  25654 tgtttagccggccctagttttctagtgagagaaacttcaacttttctctaa 25604  T

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Target: scaffold0554 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 468
Target Start/End: Original strand, 10725 - 10815
Alignment:
Q  376 gtggttttagatcattttttgacctaaaatcatccctctgcatcctttttcccttttctttcaatctaaataagtgatttccacatatatcaa 468  Q
    |||||||||| |||||||  |||||||| ||| ||||||  ||| ||||  | |||||||| ||| |||||||||| ||| ||||||||||||    
T  10725 gtggttttaggtcatttt--gacctaaagtcacccctctagatctttttcgctttttctttgaatgtaaataagtggttttcacatatatcaa 10815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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