View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1761_low_1 (Length: 579)

Name: NF1761_low_1
Description: NF1761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1761_low_1
NF1761_low_1
[»] chr5 (16 HSPs)
chr5 (16-500)||(7737041-7737525)
chr5 (503-579)||(30720688-30720764)
chr5 (503-579)||(12807049-12807125)
chr5 (503-579)||(25773654-25773730)
chr5 (503-579)||(10285253-10285329)
chr5 (509-579)||(7277618-7277688)
chr5 (505-579)||(40886806-40886880)
chr5 (505-579)||(36561295-36561369)
chr5 (503-579)||(37900820-37900896)
chr5 (503-576)||(16983263-16983336)
chr5 (18-193)||(7748274-7748449)
chr5 (54-97)||(7768296-7768339)
chr5 (536-579)||(25683424-25683467)
chr5 (156-309)||(7768105-7768255)
chr5 (503-547)||(15305216-15305260)
chr5 (546-579)||(30403158-30403191)
[»] chr8 (22 HSPs)
chr8 (502-579)||(2540127-2540204)
chr8 (503-579)||(3585456-3585532)
chr8 (503-579)||(43275593-43275669)
chr8 (505-579)||(30999717-30999791)
chr8 (503-576)||(40918928-40919001)
chr8 (503-579)||(11174419-11174495)
chr8 (507-579)||(11646521-11646593)
chr8 (503-579)||(40058499-40058575)
chr8 (505-579)||(7146920-7146994)
chr8 (503-576)||(37345576-37345649)
chr8 (503-579)||(27035002-27035078)
chr8 (503-576)||(36068085-36068158)
chr8 (502-551)||(10646596-10646645)
chr8 (503-551)||(8697898-8697946)
chr8 (503-579)||(20546483-20546559)
chr8 (503-551)||(41307961-41308009)
chr8 (503-551)||(45278701-45278749)
chr8 (502-579)||(28562425-28562502)
chr8 (503-551)||(40486453-40486501)
chr8 (502-576)||(28567923-28567997)
chr8 (502-576)||(28575516-28575590)
chr8 (546-579)||(28326850-28326883)
[»] scaffold1431 (1 HSPs)
scaffold1431 (496-579)||(95-179)
[»] chr7 (9 HSPs)
chr7 (503-579)||(10981513-10981589)
chr7 (503-579)||(27813816-27813892)
chr7 (503-579)||(36453320-36453396)
chr7 (505-579)||(25614547-25614621)
chr7 (505-579)||(40348967-40349041)
chr7 (503-579)||(47110456-47110532)
chr7 (503-551)||(25060133-25060181)
chr7 (503-551)||(2911548-2911596)
chr7 (491-539)||(2910851-2910900)
[»] chr6 (14 HSPs)
chr6 (503-579)||(1605584-1605660)
chr6 (503-579)||(29260197-29260273)
chr6 (505-579)||(30734679-30734753)
chr6 (503-579)||(7761306-7761382)
chr6 (504-579)||(13757214-13757289)
chr6 (503-579)||(8626487-8626563)
chr6 (503-579)||(15064890-15064966)
chr6 (504-579)||(30734804-30734879)
chr6 (513-579)||(31559932-31559998)
chr6 (503-551)||(19996715-19996763)
chr6 (507-561)||(17942452-17942506)
chr6 (513-576)||(8235639-8235702)
chr6 (503-550)||(4129440-4129487)
chr6 (503-539)||(19996327-19996363)
[»] chr4 (17 HSPs)
chr4 (503-579)||(14261049-14261125)
chr4 (503-579)||(21310430-21310506)
chr4 (503-579)||(25704656-25704732)
chr4 (505-579)||(24706443-24706517)
chr4 (505-576)||(22321466-22321537)
chr4 (503-579)||(12071566-12071642)
chr4 (503-579)||(40122681-40122757)
chr4 (503-579)||(34324778-34324855)
chr4 (503-579)||(21661731-21661807)
chr4 (503-579)||(21670495-21670571)
chr4 (505-576)||(44568844-44568915)
chr4 (504-578)||(20249209-20249283)
chr4 (505-579)||(50767871-50767945)
chr4 (503-579)||(31892243-31892319)
chr4 (508-579)||(1988046-1988116)
chr4 (513-551)||(19361662-19361700)
chr4 (546-579)||(48652268-48652301)
[»] chr3 (23 HSPs)
chr3 (503-579)||(36881287-36881363)
chr3 (503-579)||(198860-198936)
chr3 (503-579)||(13364848-13364924)
chr3 (503-579)||(19241864-19241940)
chr3 (503-579)||(23088127-23088203)
chr3 (503-579)||(29375143-29375219)
chr3 (503-579)||(46694306-46694382)
chr3 (505-579)||(3383083-3383157)
chr3 (505-579)||(32835152-32835226)
chr3 (503-576)||(27707363-27707436)
chr3 (507-579)||(43750146-43750218)
chr3 (492-579)||(13702762-13702850)
chr3 (503-551)||(44277455-44277503)
chr3 (503-551)||(12094587-12094635)
chr3 (515-579)||(48820448-48820512)
chr3 (495-567)||(48963152-48963223)
chr3 (503-551)||(19911514-19911562)
chr3 (507-551)||(4235760-4235803)
chr3 (503-579)||(37293442-37293518)
chr3 (503-551)||(38805250-38805298)
chr3 (507-551)||(4226716-4226759)
chr3 (503-539)||(19912174-19912210)
chr3 (503-539)||(38806341-38806377)
[»] chr2 (8 HSPs)
chr2 (503-579)||(3518913-3518989)
chr2 (503-579)||(12969935-12970011)
chr2 (503-576)||(23366794-23366867)
chr2 (503-579)||(1102508-1102584)
chr2 (503-579)||(39938175-39938251)
chr2 (503-579)||(37673933-37674009)
chr2 (526-579)||(1646317-1646370)
chr2 (503-551)||(34224378-34224426)
[»] chr1 (25 HSPs)
chr1 (503-579)||(284338-284414)
chr1 (503-579)||(23045475-23045551)
chr1 (491-579)||(321618-321707)
chr1 (503-579)||(24772101-24772177)
chr1 (503-578)||(27211161-27211236)
chr1 (503-579)||(40783853-40783929)
chr1 (505-579)||(46771644-46771718)
chr1 (505-579)||(47038046-47038120)
chr1 (518-579)||(33082765-33082826)
chr1 (496-579)||(23526237-23526321)
chr1 (513-579)||(52037316-52037382)
chr1 (503-551)||(3943065-3943113)
chr1 (503-551)||(9588675-9588723)
chr1 (503-551)||(41959083-41959131)
chr1 (505-551)||(13984991-13985037)
chr1 (503-539)||(9589631-9589667)
chr1 (512-564)||(40564241-40564293)
chr1 (503-539)||(44227853-44227889)
chr1 (503-551)||(44228228-44228276)
chr1 (506-551)||(1168369-1168414)
chr1 (546-579)||(14351956-14351989)
chr1 (546-579)||(52478016-52478049)
chr1 (503-539)||(3943763-3943799)
chr1 (503-539)||(41959809-41959845)
chr1 (503-579)||(51064952-51065028)
[»] scaffold0054 (1 HSPs)
scaffold0054 (503-579)||(45459-45535)
[»] scaffold0257 (1 HSPs)
scaffold0257 (503-551)||(23472-23520)
[»] scaffold0062 (1 HSPs)
scaffold0062 (513-579)||(459-525)
[»] scaffold1770 (1 HSPs)
scaffold1770 (503-550)||(175-222)


Alignment Details
Target: chr5 (Bit Score: 473; Significance: 0; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 16 - 500
Target Start/End: Complemental strand, 7737525 - 7737041
Alignment:
Q  16 attttttggctaaagggttgatttggtactgccaagtagcaagtccatcaccgcagaagccgtggaggagaaccactactggtttcgtgggtttggatat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  7737525 attttttggctaaagggttgatttggtactgccaagtagcaagtccatcaccgcagaagccatggaggagaaccactactggcttcgtgggtttggatat 7737426  T
Q  116 gggtttgggttttagtttggacttggaaatggtgttagaaggaacccaaaatctcataactgttcctggttctatctctactgtgtggagctttaaacct 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7737425 gggtttgggttttagtttggacttggaaatggtgttagaaggaacccaaaatctcataactgttcctggttctatctctactgtgtggagctttaaacct 7737326  T
Q  216 gccatcttcactacccaactaaccaatgtccaaattacgttcaccgtgttcaccatgtttgattatatttgtttgtgtctattgtgattgcactggcttt 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7737325 gccatcttcactacccaactaaccaatgtccaaattacgttcaccgtgttcaccatgtttgattatatttgtttgtgtctattgtgattgcactggcttt 7737226  T
Q  316 ctcttttgtactaatgttttaagcaatgaagtatgtgcatgccacttgctatagtagtaaatagtgtgctacgaattatttgtatctagctaccaactaa 415  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7737225 ctcttttgtattaatgttttaagcaatgaagtatgtgcatgccacttgctatagtagtaaatagtgtgctacgaattatttgtatctagctaccaactaa 7737126  T
Q  416 cacatttgagtaaatggaatgcatgaatgcgacgtcatgcccgtatggatgaggcattggtaagtgtgttgatcataaaaatata 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7737125 cacatttgagtaaatggaatgcatgaatgcgacgtcatgcccgtatggatgaggcattggtaagtgtgttgatcataaaaatata 7737041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 30720764 - 30720688
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30720764 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 30720688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 12807125 - 12807049
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12807125 cctccgtttcaaaatacatgtccattttggagaaattgcattaaccaagaaaccaaataaattttgttatttttgat 12807049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 25773654 - 25773730
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25773654 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgat 25773730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 10285329 - 10285253
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  10285329 cctccgtttcaaaatagatgtctattttggagaaattgcattaaccaagaaactaaataaattttgttatttttgat 10285253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 509 - 579
Target Start/End: Complemental strand, 7277688 - 7277618
Alignment:
Q  509 tttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  7277688 tttcaaaatacatgtctattttggagaaattggagtaaccaataaaccaaataaattttgttatttttgat 7277618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 505 - 579
Target Start/End: Complemental strand, 40886880 - 40886806
Alignment:
Q  505 tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  40886880 tccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaatcgaataaattttgttatttttgat 40886806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 505 - 579
Target Start/End: Complemental strand, 36561369 - 36561295
Alignment:
Q  505 tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||| ||||| || |||||||| ||| ||||||||||||||||||||||||||||||||    
T  36561369 tccgtttcaaaatacatgtccattttagaaaaattgcagtaatcaagaaaccaaataaattttgttatttttgat 36561295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 37900896 - 37900820
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||||||||||||||  || ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||    
T  37900896 cctccgtttcaaaatacacatccattttggagaaattgcagtaaccaagaaactaaataaattttgatatttttgat 37900820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 503 - 576
Target Start/End: Original strand, 16983263 - 16983336
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 576  Q
    |||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||| || |||||    
T  16983263 cctctgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataatttttttttttttt 16983336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 7748449 - 7748274
Alignment:
Q  18 tttttggctaaagggttgatttggtactgccaagtagcaagtccatcaccgcagaagccgtggaggagaaccactactggtttcgtgggtttggatatgg 117  Q
    ||||| ||||||| |||||||||| ||  ||||||| ||||||| || ||   ||||||||| || |||||||||||||| || || ||||| || |||     
T  7748449 tttttagctaaagtgttgatttggaacccccaagtaacaagtccgtccccagcgaagccgtgaagaagaaccactactggcttggtaggttttgaaatgt 7748350  T
Q  118 gtttgggttttagtttggacttggaaatggtgttagaaggaacccaaaatctcataactgttcctggttctatctc 193  Q
    | ||| ||||  |||||| | | |||||||| | ||| |||||||||||| |||||||||| || || ||||||||    
T  7748349 gcttgagtttgggtttgggcgttgaaatggtttcagatggaacccaaaatttcataactgtaccgggctctatctc 7748274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 7768339 - 7768296
Alignment:
Q  54 gcaagtccatcaccgcagaagccgtggaggagaaccactactgg 97  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  7768339 gcaagtccatcgccgcagaagccgtggaggagaaccactactgg 7768296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 536 - 579
Target Start/End: Complemental strand, 25683467 - 25683424
Alignment:
Q  536 aattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  25683467 aattgcaataaccaagaaaccaaataaattttgttatttttgat 25683424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 156 - 309
Target Start/End: Complemental strand, 7768255 - 7768105
Alignment:
Q  156 ggaacccaaaatctcataactgttcctggttctatctctactgtgtggagctttaaacctgccatcttcactacccaactaaccaatgtccaaattacgt 255  Q
    |||||||| |||||||||  ||| ||| | ||||||||||| ||||  ||||| | |||| |  ||||||    ||||||| | |||| |||||||||||    
T  7768255 ggaacccagaatctcatacgtgtaccttgctctatctctacggtgtaaagcttcacacctacattcttcatcgtccaactaccaaatgaccaaattacgt 7768156  T
Q  256 tcaccgtgttcaccatgtttgattatatttgtttgtgtctattgtgattgcact 309  Q
    ||||| |||||||||||||| |||| |||||||  | |||||||||||||||||    
T  7768155 tcaccatgttcaccatgtttaatta-atttgtt--tttctattgtgattgcact 7768105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 503 - 547
Target Start/End: Complemental strand, 15305260 - 15305216
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaac 547  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||    
T  15305260 cctccgtttcaaaatacatgtccattttggagaaattgcagtaac 15305216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 546 - 579
Target Start/End: Complemental strand, 30403191 - 30403158
Alignment:
Q  546 accaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||||||||||||||||||||||||||||||    
T  30403191 accaagaaaccaaataaattttgttatttttgat 30403158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 502 - 579
Target Start/End: Complemental strand, 2540204 - 2540127
Alignment:
Q  502 tcctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2540204 tcctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 2540127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 3585456 - 3585532
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3585456 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 3585532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 43275669 - 43275593
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43275669 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 43275593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 505 - 579
Target Start/End: Complemental strand, 30999791 - 30999717
Alignment:
Q  505 tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30999791 tccgtttcaaaatacatgtcaattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 30999717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 503 - 576
Target Start/End: Complemental strand, 40919001 - 40918928
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 576  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40919001 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 40918928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 11174495 - 11174419
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11174495 cctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 11174419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 507 - 579
Target Start/End: Complemental strand, 11646593 - 11646521
Alignment:
Q  507 cgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11646593 cgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 11646521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 40058575 - 40058499
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40058575 cctccgtttcaaaatacatgtccatttcggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 40058499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 505 - 579
Target Start/End: Original strand, 7146920 - 7146994
Alignment:
Q  505 tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  7146920 tccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaagaaaccaaataaattttgttatttttgat 7146994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 503 - 576
Target Start/End: Original strand, 37345576 - 37345649
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 576  Q
    |||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  37345576 cctccgtttcaaaatacatgtccattttgaagaaattgcaccaaccaagaaaccaaataaattttgttattttt 37345649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 27035002 - 27035078
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  27035002 cctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataattttttttatttttgat 27035078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 503 - 576
Target Start/End: Original strand, 36068085 - 36068158
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 576  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||||||||    
T  36068085 cctccgtttcaaaatacatgtccattttggaggaattgtactaaccaaaaaaccaaataaattttgttattttt 36068158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 502 - 551
Target Start/End: Original strand, 10646596 - 10646645
Alignment:
Q  502 tcctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  10646596 tcctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 10646645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 503 - 551
Target Start/End: Complemental strand, 8697946 - 8697898
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  8697946 cctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 8697898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 20546559 - 20546483
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||| |||||||||| ||||| |||||| ||||||||||  || |||||||  |||||||||||||||||||||||    
T  20546559 cctccatttcaaaatatatgtccattttgaagaaattgcaacaatcaagaaattaaataaattttgttatttttgat 20546483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 503 - 551
Target Start/End: Complemental strand, 41308009 - 41307961
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  41308009 cctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 41307961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 503 - 551
Target Start/End: Complemental strand, 45278749 - 45278701
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  45278749 cctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 45278701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 502 - 579
Target Start/End: Original strand, 28562425 - 28562502
Alignment:
Q  502 tcctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||| |||| |||||| ||||||| |||  |||||| || ||||||||| |||| |||||||||    
T  28562425 tcctccgtttcaaaatacttgtccattttgaagaaattacacataccaaggaatcaaataaatgttgtcatttttgat 28562502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 503 - 551
Target Start/End: Complemental strand, 40486501 - 40486453
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||||||||||||| |||||| |||||||||| ||||||||    
T  40486501 cctccgtttcaaaatacatgtccattttgaagaaattgcagtaaccaag 40486453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 28567923 - 28567997
Alignment:
Q  502 tcctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 576  Q
    |||||||||||||||||| |||| |||||| ||||||| |||  |||||  || ||||||||| |||| ||||||    
T  28567923 tcctccgtttcaaaatacttgtccattttgaagaaattacacataccaatgaatcaaataaatgttgtcattttt 28567997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 576
Target Start/End: Original strand, 28575516 - 28575590
Alignment:
Q  502 tcctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 576  Q
    |||||||||||||||||| |||| |||||| ||||||| |||  |||||  || ||||||||| |||| ||||||    
T  28575516 tcctccgtttcaaaatacttgtccattttgaagaaattacacataccaatgaatcaaataaatgttgtcattttt 28575590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 579
Target Start/End: Complemental strand, 28326883 - 28326850
Alignment:
Q  546 accaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||||| ||||||||||||||||||||||||    
T  28326883 accaagaaatcaaataaattttgttatttttgat 28326850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 496 - 579
Target Start/End: Complemental strand, 179 - 95
Alignment:
Q  496 atatactc-ctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  179 atatactctctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 95  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 4e-33; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 10981513 - 10981589
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10981513 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 10981589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 27813816 - 27813892
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27813816 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 27813892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 36453396 - 36453320
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36453396 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttattatttttgat 36453320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 505 - 579
Target Start/End: Complemental strand, 25614621 - 25614547
Alignment:
Q  505 tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25614621 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaaaaaaccaaataaattttgttatttttgat 25614547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 505 - 579
Target Start/End: Original strand, 40348967 - 40349041
Alignment:
Q  505 tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40348967 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgat 40349041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 47110456 - 47110532
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47110456 cctccatttcaaaatacatgtccattttggagaaattgcactaaccaagaaacaaaataaattttgttatttttgat 47110532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 503 - 551
Target Start/End: Complemental strand, 25060181 - 25060133
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  25060181 cctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 25060133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 503 - 551
Target Start/End: Complemental strand, 2911596 - 2911548
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    ||||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  2911596 cctccatttcaaaatacatgtccattttggagaaattgcagtaaccaag 2911548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 491 - 539
Target Start/End: Original strand, 2910851 - 2910900
Alignment:
Q  491 taaaaatatactcc-tccgtttcaaaatacatgtctattttggagaaatt 539  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  2910851 taaaaatatactccctccgtttcaaaatacatgtctattttaaagaaatt 2910900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 4e-33; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 1605584 - 1605660
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1605584 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 1605660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 29260197 - 29260273
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29260197 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 29260273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 505 - 579
Target Start/End: Complemental strand, 30734753 - 30734679
Alignment:
Q  505 tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30734753 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 30734679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 7761306 - 7761382
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7761306 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaactaaataaattttgttatttttgat 7761382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 504 - 579
Target Start/End: Original strand, 13757214 - 13757289
Alignment:
Q  504 ctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13757214 ctccgtttcaaaatacatgtccattttggagaaattacactaaccaagaaaccaaataaattttgttatttttgat 13757289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 8626487 - 8626563
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  8626487 cctccgtttcaaaatacatgtccattttgaagaaattgcattaaccaagaaaccaaataaattttgttatttttgat 8626563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 15064966 - 15064890
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||| |||||||||||  |||||||||||||||||||||||||||||||||||    
T  15064966 cctccgtttcaaaatacatgtccattttagagaaattgcagcaaccaagaaaccaaataaattttgttatttttgat 15064890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 504 - 579
Target Start/End: Complemental strand, 30734879 - 30734804
Alignment:
Q  504 ctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||||||||||||||||| |||||| |||||||||| |||| || ||| ||||||||||||||||||||||||    
T  30734879 ctccgtttcaaaatacatgtccattttgaagaaattgcagtaacaaaaaaatcaaataaattttgttatttttgat 30734804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 513 - 579
Target Start/End: Complemental strand, 31559998 - 31559932
Alignment:
Q  513 aaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||    
T  31559998 aaaatacatgtccattttggagaaattgcattaaccaaaaaatcaaataaattttgttatttttgat 31559932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 503 - 551
Target Start/End: Complemental strand, 19996763 - 19996715
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19996763 cctccgtttcaaaatacatgtctattttggagaaattgcagtaaccaag 19996715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 507 - 561
Target Start/End: Original strand, 17942452 - 17942506
Alignment:
Q  507 cgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaata 561  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  17942452 cgtttcaaaatacatgtccatttttgagaaattgcagtaaccaagaaaccaaata 17942506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 513 - 576
Target Start/End: Original strand, 8235639 - 8235702
Alignment:
Q  513 aaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 576  Q
    |||||||||||  |||||| |||||||||| |||||||||||| ||||||| ||||||||||||    
T  8235639 aaaatacatgtacattttgaagaaattgcagtaaccaagaaacgaaataaaatttgttattttt 8235702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 550
Target Start/End: Original strand, 4129440 - 4129487
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaa 550  Q
    ||||||||||||||||||| || | ||||||||||||||| |||||||    
T  4129440 cctccgtttcaaaatacatatccactttggagaaattgcagtaaccaa 4129487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 539
Target Start/End: Original strand, 19996327 - 19996363
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaatt 539  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  19996327 cctccgtttcaaaatacatgtccattttagagaaatt 19996363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 4e-33; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 14261049 - 14261125
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14261049 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 14261125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 21310430 - 21310506
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21310430 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 21310506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 25704656 - 25704732
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25704656 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 25704732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 505 - 579
Target Start/End: Complemental strand, 24706517 - 24706443
Alignment:
Q  505 tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24706517 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 24706443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 505 - 576
Target Start/End: Complemental strand, 22321537 - 22321466
Alignment:
Q  505 tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 576  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22321537 tccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 22321466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 12071566 - 12071642
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  12071566 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaataaactaaataaattttgttatttttgat 12071642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 40122757 - 40122681
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  40122757 cctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaaaaaaccaaataaattttgttatttttgat 40122681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 34324855 - 34324778
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaa-taaattttgttatttttgat 579  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  34324855 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaactaaattaaattttgttatttttgat 34324778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 21661807 - 21661731
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  21661807 cctccctttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttattatttttgat 21661731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 21670571 - 21670495
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  21670571 cctccctttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaatttttttatttttgat 21670495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 505 - 576
Target Start/End: Original strand, 44568844 - 44568915
Alignment:
Q  505 tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 576  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  44568844 tccgtttcaaaatacatgtccattttgaagaaattgcactaaccaaaaaaccaaataaattttgttattttt 44568915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 504 - 578
Target Start/End: Complemental strand, 20249283 - 20249209
Alignment:
Q  504 ctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttga 578  Q
    ||||||||||||||||||||| |||||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  20249283 ctccgtttcaaaatacatgtccattttggataaattgtattaaccaagaaaccaaataaattttgttatttttga 20249209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 505 - 579
Target Start/End: Original strand, 50767871 - 50767945
Alignment:
Q  505 tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||||||||||||| |  ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50767871 tccgtttcaaaatacatattcattttagagaaattgcactaatcaagaaaccaaataaattttgttatttttgat 50767945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 31892243 - 31892319
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||| |||||||||||||  |||||  |||||||||| ||||||||||| |||||||||||| |||||||||||    
T  31892243 cctccgtatcaaaatacatgttcattttaaagaaattgcagtaaccaagaaatcaaataaattttattatttttgat 31892319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 508 - 579
Target Start/End: Original strand, 1988046 - 1988116
Alignment:
Q  508 gtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||| |||||| |||||||||| |||||||||||| |||| |||||| |||||||||||| |||||||||||    
T  1988046 gttttaaaatatatgtctattt-ggagaaattgcagtaactaagaaatcaaataaattttattatttttgat 1988116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 551
Target Start/End: Original strand, 19361662 - 19361700
Alignment:
Q  513 aaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  19361662 aaaatacatgtccattttggagaaattgcagtaaccaag 19361700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 579
Target Start/End: Original strand, 48652268 - 48652301
Alignment:
Q  546 accaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||||| ||||||||||||||||||||||||    
T  48652268 accaagaaatcaaataaattttgttatttttgat 48652301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 4e-33; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 36881287 - 36881363
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36881287 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 36881363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 198860 - 198936
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  198860 cctccgtttcaaaatacatgtccattttggagaaattgcactgaccaagaaaccaaataaattttgttatttttgat 198936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 13364848 - 13364924
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13364848 cctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 13364924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 19241940 - 19241864
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19241940 cctccgtttcaaaatacatgtccattttggtgaaattgcactaaccaagaaaccaaataaattttgttatttttgat 19241864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 23088203 - 23088127
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23088203 cctctgtttcaaaatatatgtctattttgaagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 23088127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 29375143 - 29375219
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  29375143 cctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttcttatttttgat 29375219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 46694382 - 46694306
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46694382 cctccgtttcaaaatacatgtcctttttggagaaattgcactaatcaagaaaccaaataaattttgttatttttgat 46694306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 505 - 579
Target Start/End: Original strand, 3383083 - 3383157
Alignment:
Q  505 tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3383083 tccgtttcaaaatatatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttgttatttttgat 3383157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 505 - 579
Target Start/End: Complemental strand, 32835226 - 32835152
Alignment:
Q  505 tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  32835226 tccgtttcaaaatacatgtccattttggagaaattgcaataaccaagaaaacaaataaattttgttatttttgat 32835152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 503 - 576
Target Start/End: Complemental strand, 27707436 - 27707363
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 576  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27707436 cctccgtttcgaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttgttattttt 27707363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 507 - 579
Target Start/End: Original strand, 43750146 - 43750218
Alignment:
Q  507 cgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  43750146 cgtttcaaaatacatgtccattttggagaaattggagtaaccaagaaaccaaataaattttgttatttttgat 43750218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 492 - 579
Target Start/End: Original strand, 13702762 - 13702850
Alignment:
Q  492 aaaaatatactcc-tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||| ||||||| ||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  13702762 aaaaagatactccatccattttaaaatacatgcctattttggagaaattgcagtaaccaagaaaccaaataaattttgatatttttgat 13702850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 503 - 551
Target Start/End: Complemental strand, 44277503 - 44277455
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44277503 cctccgtttcaaaatacatgtctattttggagaaattgcagtaaccaag 44277455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 503 - 551
Target Start/End: Original strand, 12094587 - 12094635
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  12094587 cctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 12094635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 515 - 579
Target Start/End: Complemental strand, 48820512 - 48820448
Alignment:
Q  515 aatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||||| ||||||||||||||| |  || |||| ||||||||||||||||||||||||||||    
T  48820512 aatacatgtttattttggagaaattacggtatccaataaaccaaataaattttgttatttttgat 48820448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 495 - 567
Target Start/End: Original strand, 48963152 - 48963223
Alignment:
Q  495 aatatactcc-tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaatttt 567  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||  |||||||| ||| ||||||| ||||    
T  48963152 aatatactccctccgtttcaaaatacatatctattttggagaaattg--ctaaccaataaatcaaataattttt 48963223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 503 - 551
Target Start/End: Original strand, 19911514 - 19911562
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  19911514 cctccgtttcaaaatacatgttcattttggagaaattgcagtaaccaag 19911562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 507 - 551
Target Start/End: Original strand, 4235760 - 4235803
Alignment:
Q  507 cgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    ||||||||||||||||||  |||||||||||||||||||||||||    
T  4235760 cgtttcaaaatacatgtcg-ttttggagaaattgcactaaccaag 4235803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 37293442 - 37293518
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||||||| ||||| |||| |||||| ||||||| |||  |||||| || ||||||||| |||| |||||||||    
T  37293442 cctccgtttcacaatacttgtccattttgaagaaattacacataccaaggaatcaaataaatgttgtcatttttgat 37293518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 503 - 551
Target Start/End: Original strand, 38805250 - 38805298
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    ||||||||| |||||||||||| ||||| ||||||||||| ||||||||    
T  38805250 cctccgttttaaaatacatgtccattttagagaaattgcagtaaccaag 38805298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 551
Target Start/End: Original strand, 4226716 - 4226759
Alignment:
Q  507 cgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||    
T  4226716 cgtttcaaaatacatgtcg-ttttggagaaattgcagtaaccaag 4226759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 539
Target Start/End: Complemental strand, 19912210 - 19912174
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaatt 539  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  19912210 cctccgtttcaaaatacatgtccattttagagaaatt 19912174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 539
Target Start/End: Complemental strand, 38806377 - 38806341
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaatt 539  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  38806377 cctccgtttcaaaatacatgtccattttagagaaatt 38806341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 4e-33; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 3518913 - 3518989
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3518913 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 3518989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 12970011 - 12969935
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12970011 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 12969935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 503 - 576
Target Start/End: Original strand, 23366794 - 23366867
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 576  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23366794 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttattttt 23366867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 1102508 - 1102584
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1102508 cctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaaccaaataaattttgttatttttgat 1102584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 39938175 - 39938251
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39938175 cctccgtttcaaaatacatgaccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 39938251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 37674009 - 37673933
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37674009 cctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgat 37673933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 526 - 579
Target Start/End: Original strand, 1646317 - 1646370
Alignment:
Q  526 attttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  1646317 attttggagaaattgcagcaaccaagaaactaaataaattttgttatttttgat 1646370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 503 - 551
Target Start/End: Complemental strand, 34224426 - 34224378
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  34224426 cctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 34224378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 4e-33; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 284338 - 284414
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  284338 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 284414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 23045551 - 23045475
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23045551 cctccgtttcaaaatacatgtccattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 23045475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 491 - 579
Target Start/End: Original strand, 321618 - 321707
Alignment:
Q  491 taaaaatatactcc-tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  321618 taaaaatttactccctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 321707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 24772177 - 24772101
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24772177 cctccgtttcaaaatacatgtccattttgaagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 24772101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 503 - 578
Target Start/End: Complemental strand, 27211236 - 27211161
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttga 578  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27211236 cctccgtttcaaaatacatgtccattttggagaaattgcaataaccaagaaaccaaataaattttgttatttttga 27211161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 40783929 - 40783853
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40783929 cctccgtttcaaaatacatgttcattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgat 40783853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 505 - 579
Target Start/End: Original strand, 46771644 - 46771718
Alignment:
Q  505 tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  46771644 tccgtttcaaaatacatgtccattttggagaaattgcagtaaccaagaaattaaataaattttgttatttttgat 46771718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 505 - 579
Target Start/End: Complemental strand, 47038120 - 47038046
Alignment:
Q  505 tccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  47038120 tccgtttcaaaatacatgtccattttggagaaattgtactaactaagaaatcaaataaattttgttatttttgat 47038046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 518 - 579
Target Start/End: Original strand, 33082765 - 33082826
Alignment:
Q  518 acatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33082765 acatgtctattttggagaaattgcactaaccaagaaatcaaataaattttgttatttttgat 33082826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 496 - 579
Target Start/End: Original strand, 23526237 - 23526321
Alignment:
Q  496 atatactcct-ccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||| || |||||||||||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  23526237 atatactccttccatttcaaaatacatgttcattttggagaaattgcagtaatcaagaaaccaaataaattttgttatttttgat 23526321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 513 - 579
Target Start/End: Complemental strand, 52037382 - 52037316
Alignment:
Q  513 aaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||| ||||| ||||||||||| || |||| |||||||||||||||| |||||||||||    
T  52037382 aaaatacatgtccattttagagaaattgcattatccaaaaaaccaaataaattttattatttttgat 52037316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 503 - 551
Target Start/End: Original strand, 3943065 - 3943113
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  3943065 cctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 3943113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 503 - 551
Target Start/End: Original strand, 9588675 - 9588723
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  9588675 cctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 9588723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 503 - 551
Target Start/End: Original strand, 41959083 - 41959131
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  41959083 cctccgtttcaaaatacatgtccattttggagaaattgcaataaccaag 41959131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 505 - 551
Target Start/End: Complemental strand, 13985037 - 13984991
Alignment:
Q  505 tccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  13985037 tccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 13984991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 503 - 539
Target Start/End: Complemental strand, 9589667 - 9589631
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaatt 539  Q
    |||||||||||||||||||||||||||| ||||||||    
T  9589667 cctccgtttcaaaatacatgtctattttagagaaatt 9589631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 512 - 564
Target Start/End: Complemental strand, 40564293 - 40564241
Alignment:
Q  512 caaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaat 564  Q
    ||||||| ||||| |||||||| |||| ||| |||||||||||||||||||||    
T  40564293 caaaatatatgtccattttggaaaaatcgcagtaaccaagaaaccaaataaat 40564241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 503 - 539
Target Start/End: Original strand, 44227853 - 44227889
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaatt 539  Q
    |||||||||||||||||||||| ||||||||||||||    
T  44227853 cctccgtttcaaaatacatgtccattttggagaaatt 44227889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 503 - 551
Target Start/End: Complemental strand, 44228276 - 44228228
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    ||||| |||||||||||||||| ||||||||||||||||  ||||||||    
T  44228276 cctccatttcaaaatacatgtccattttggagaaattgctgtaaccaag 44228228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 551
Target Start/End: Original strand, 1168369 - 1168414
Alignment:
Q  506 ccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||||||||||  ||||| |||||||||| ||||||||    
T  1168369 ccgtttcaaaatacatgtcgtttttgaagaaattgcagtaaccaag 1168414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 579
Target Start/End: Complemental strand, 14351989 - 14351956
Alignment:
Q  546 accaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||||| ||||||||||||||||||||||||    
T  14351989 accaagaaaacaaataaattttgttatttttgat 14351956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 579
Target Start/End: Original strand, 52478016 - 52478049
Alignment:
Q  546 accaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||||| ||||||||||||||||||||||||    
T  52478016 accaagaaatcaaataaattttgttatttttgat 52478049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 539
Target Start/End: Complemental strand, 3943799 - 3943763
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaatt 539  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  3943799 cctccgtttcaaaatacatgtccattttagagaaatt 3943763  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 539
Target Start/End: Complemental strand, 41959845 - 41959809
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaatt 539  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  41959845 cctccgtttcaaaatacatgtccattttagagaaatt 41959809  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 579
Target Start/End: Complemental strand, 51065028 - 51064952
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    ||||||||||| ||||| |||| |||||  ||||||| |||  |||||| || ||||||||| |||| |||||||||    
T  51065028 cctccgtttcacaatacttgtccattttaaagaaattacacataccaaggaatcaaataaatgttgtcatttttgat 51064952  T

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Target: scaffold0054 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 503 - 579
Target Start/End: Original strand, 45459 - 45535
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45459 cctccgtttcaaaatacatgttcattttggagaaattgcaccaaccaagaaaccaaataaattttgttatttttgat 45535  T

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Target: scaffold0257 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 503 - 551
Target Start/End: Original strand, 23472 - 23520
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaag 551  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  23472 cctccgtttcaaaatacatgtccattttggagaaattgcagtaaccaag 23520  T

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Target: scaffold0062 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 579
Target Start/End: Complemental strand, 525 - 459
Alignment:
Q  513 aaaatacatgtctattttggagaaattgcactaaccaagaaaccaaataaattttgttatttttgat 579  Q
    |||||||||||  ||||||| ||||||||| ||| ||| ||| ||||||||||||||||||||||||    
T  525 aaaatacatgttcattttggcgaaattgcagtaatcaaaaaatcaaataaattttgttatttttgat 459  T

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Target: scaffold1770 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 550
Target Start/End: Original strand, 175 - 222
Alignment:
Q  503 cctccgtttcaaaatacatgtctattttggagaaattgcactaaccaa 550  Q
    ||||||||||||||||||| || | ||||||||||||||| |||||||    
T  175 cctccgtttcaaaatacatatccactttggagaaattgcagtaaccaa 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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