View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1761_low_10 (Length: 339)
Name: NF1761_low_10
Description: NF1761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1761_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 8628762 - 8629039
Alignment:
| Q |
1 |
aataacaaacttgtctttgtttttgtaattaccttaaaaccaacatgaggagaatatgacaactaagtttgaaaattnnnnnnncacatattacacacta |
100 |
Q |
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| T |
8628762 |
aataacaaacttgtctttgtttttgtaattaccttaaaaccaacatgaggagaatatgacaactaagtttgaaaattaaaaaaacacatattacacacta |
8628861 |
T |
|
| Q |
101 |
attaaatcattttggcaacccatttctgttttagtttttgttattacaaatacaaacatcatcgtaattacaatgataaattaaacaaagacattgttaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8628862 |
attaaatcattttggcaacccatttctgttttagtttttgttattacaaatacaatcatcatcgtaattacaatgataaattaaacaaagacattgttaa |
8628961 |
T |
|
| Q |
201 |
ttcttcttaattaactttcaatattttctctctcttcatttcaatgttgaaaaaagtctcttttgaccatcatcacca |
278 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
8628962 |
ttcttcttaattaactttcaatattttctctctcttaatttcaatgttgaaaaaagtctcttttgaccatcatcacca |
8629039 |
T |
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