View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1761_low_8 (Length: 350)
Name: NF1761_low_8
Description: NF1761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1761_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 87 - 334
Target Start/End: Original strand, 45386581 - 45386830
Alignment:
| Q |
87 |
agaatcgacagttggttttgattggaaagatccgctatttgagtaaaattatagactttttcacaaaatgatgtatattgttcaactactctaacaaaag |
186 |
Q |
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| T |
45386581 |
agaatcgacagttggttttgattggaaagatccgctatttgagtaa--ttatagactttttcacaaaatgatgtatattgttcaactactctaacaaaag |
45386678 |
T |
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| Q |
187 |
gacacctaatatttgaaaggttaatttggaggcaaga----aagaaagaaaaataacctaagctgaatcaaatcaacgtgagttgttgttgttgtctacg |
282 |
Q |
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| T |
45386679 |
gacacctaatatttgaaaggttaatttggaggcaagaaagaaagaaagaaaaataatctaagctgaatcaaatcaacgtgagttgttgttgttgtctacg |
45386778 |
T |
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| Q |
283 |
tgaagaaacaaacctatccgagacaggtttatcccatcttaatcattcaact |
334 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45386779 |
tgaagaaacaaacctatccgagacaggtttatcccatcttaatcattcaact |
45386830 |
T |
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