View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17620_low_1 (Length: 855)

Name: NF17620_low_1
Description: NF17620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17620_low_1
NF17620_low_1
[»] chr8 (51 HSPs)
chr8 (406-586)||(27988500-27988687)
chr8 (406-586)||(28045802-28045989)
chr8 (406-587)||(168463-168652)
chr8 (403-584)||(34228682-34228871)
chr8 (405-583)||(16888543-16888728)
chr8 (406-586)||(4537744-4537932)
chr8 (407-584)||(30675574-30675758)
chr8 (457-560)||(33357186-33357289)
chr8 (457-586)||(4648193-4648323)
chr8 (404-562)||(43119241-43119404)
chr8 (412-554)||(16890486-16890634)
chr8 (406-586)||(9063052-9063239)
chr8 (434-562)||(29444170-29444302)
chr8 (457-559)||(36730471-36730573)
chr8 (404-584)||(16394059-16394247)
chr8 (459-583)||(21595848-21595973)
chr8 (463-586)||(16785085-16785209)
chr8 (457-584)||(37373206-37373334)
chr8 (406-559)||(11112666-11112825)
chr8 (457-584)||(10870357-10870481)
chr8 (405-582)||(20831552-20831737)
chr8 (442-560)||(42035019-42035141)
chr8 (413-559)||(2805267-2805419)
chr8 (412-562)||(9253908-9254063)
chr8 (442-585)||(12203854-12204002)
chr8 (442-585)||(12448282-12448430)
chr8 (465-585)||(3930298-3930419)
chr8 (457-561)||(40831302-40831406)
chr8 (462-553)||(7304580-7304671)
chr8 (406-562)||(13643036-13643197)
chr8 (406-562)||(13743461-13743622)
chr8 (412-562)||(28626792-28626947)
chr8 (434-556)||(32113938-32114065)
chr8 (405-558)||(9537823-9537982)
chr8 (464-559)||(17467630-17467725)
chr8 (412-523)||(39406905-39407020)
chr8 (457-542)||(42433601-42433685)
chr8 (459-547)||(34192814-34192902)
chr8 (481-559)||(9278239-9278317)
chr8 (458-562)||(22956730-22956833)
chr8 (481-562)||(10618042-10618123)
chr8 (457-584)||(29235235-29235364)
chr8 (457-535)||(22451835-22451912)
chr8 (509-560)||(12652656-12652707)
chr8 (462-514)||(24843341-24843393)
chr8 (489-542)||(34890647-34890700)
chr8 (464-532)||(30933386-30933453)
chr8 (479-542)||(42449009-42449072)
chr8 (457-542)||(4811602-4811687)
chr8 (477-542)||(33124570-33124635)
chr8 (519-561)||(36923782-36923824)
[»] chr5 (30 HSPs)
chr5 (401-584)||(34650828-34651018)
chr5 (406-587)||(35132519-35132707)
chr5 (406-587)||(13661805-13661994)
chr5 (406-584)||(11957967-11958153)
chr5 (459-586)||(19647717-19647846)
chr5 (406-584)||(35504241-35504426)
chr5 (457-588)||(13470147-13470280)
chr5 (406-586)||(8787337-8787525)
chr5 (405-558)||(9721607-9721765)
chr5 (409-584)||(6283562-6283745)
chr5 (459-584)||(10069969-10070095)
chr5 (405-586)||(10054352-10054540)
chr5 (464-584)||(21547458-21547579)
chr5 (406-585)||(40564404-40564589)
chr5 (457-548)||(11846110-11846201)
chr5 (457-546)||(12506336-12506425)
chr5 (457-559)||(20175254-20175356)
chr5 (468-558)||(31909659-31909749)
chr5 (457-559)||(39066992-39067095)
chr5 (474-586)||(4837256-4837369)
chr5 (405-562)||(40057331-40057494)
chr5 (457-541)||(10955997-10956080)
chr5 (478-569)||(2619635-2619726)
chr5 (457-586)||(39069379-39069507)
chr5 (457-559)||(19436895-19436995)
chr5 (457-528)||(4268620-4268690)
chr5 (489-559)||(6284822-6284892)
chr5 (458-588)||(21944918-21945051)
chr5 (489-562)||(6042136-6042210)
chr5 (478-535)||(20719327-20719384)
[»] chr4 (54 HSPs)
chr4 (405-586)||(43944505-43944693)
chr4 (442-596)||(19503143-19503302)
chr4 (397-591)||(29591182-29591384)
chr4 (405-584)||(54897308-54897495)
chr4 (403-588)||(789527-789720)
chr4 (457-587)||(15186240-15186372)
chr4 (406-585)||(4089141-4089328)
chr4 (457-584)||(28755621-28755749)
chr4 (405-558)||(12356272-12356431)
chr4 (405-585)||(4268821-4269009)
chr4 (432-588)||(47231900-47232062)
chr4 (413-562)||(50619110-50619264)
chr4 (406-585)||(18067879-18068066)
chr4 (457-584)||(32202537-32202666)
chr4 (406-586)||(16536046-16536234)
chr4 (406-586)||(33108673-33108860)
chr4 (457-590)||(7768932-7769067)
chr4 (406-556)||(36395129-36395285)
chr4 (457-556)||(39843937-39844036)
chr4 (406-586)||(43202384-43202571)
chr4 (434-586)||(46148939-46149095)
chr4 (435-587)||(52533816-52533974)
chr4 (442-584)||(3783539-3783687)
chr4 (462-562)||(42898808-42898908)
chr4 (471-562)||(32217069-32217160)
chr4 (459-562)||(54945837-54945940)
chr4 (458-585)||(55882683-55882811)
chr4 (457-584)||(24679700-24679827)
chr4 (459-584)||(54054548-54054675)
chr4 (457-536)||(30387191-30387270)
chr4 (457-586)||(37987934-37988064)
chr4 (464-562)||(54655940-54656038)
chr4 (462-555)||(4220226-4220319)
chr4 (457-562)||(6164118-6164222)
chr4 (405-586)||(5091611-5091798)
chr4 (459-558)||(42815137-42815237)
chr4 (457-564)||(31680520-31680627)
chr4 (459-561)||(46688264-46688371)
chr4 (457-562)||(30154220-30154324)
chr4 (463-560)||(49915185-49915282)
chr4 (457-584)||(53655935-53656062)
chr4 (471-559)||(50603254-50603342)
chr4 (511-561)||(1432653-1432703)
chr4 (457-511)||(8133782-8133836)
chr4 (406-526)||(16820912-16821038)
chr4 (457-535)||(41265510-41265587)
chr4 (457-514)||(39877306-39877363)
chr4 (494-562)||(50167615-50167681)
chr4 (463-542)||(53268764-53268842)
chr4 (477-555)||(52697083-52697160)
chr4 (477-534)||(31517217-31517274)
chr4 (465-560)||(3999451-3999546)
chr4 (532-587)||(8133731-8133787)
chr4 (527-565)||(39877554-39877592)
[»] chr1 (58 HSPs)
chr1 (406-590)||(17333284-17333473)
chr1 (406-587)||(51065748-51065937)
chr1 (406-586)||(15227737-15227925)
chr1 (406-584)||(5694321-5694507)
chr1 (406-585)||(29657770-29657957)
chr1 (457-561)||(9266785-9266889)
chr1 (406-588)||(18043158-18043348)
chr1 (412-586)||(42769996-42770178)
chr1 (407-567)||(38162869-38163035)
chr1 (459-585)||(29210412-29210540)
chr1 (412-562)||(12072068-12072224)
chr1 (406-560)||(47010019-47010179)
chr1 (457-585)||(19031872-19032002)
chr1 (403-562)||(24178460-24178625)
chr1 (457-585)||(48071482-48071611)
chr1 (405-556)||(30294380-30294537)
chr1 (457-560)||(3784770-3784873)
chr1 (434-561)||(36446355-36446485)
chr1 (406-582)||(38701937-38702117)
chr1 (457-557)||(3097688-3097788)
chr1 (457-559)||(35985678-35985780)
chr1 (457-587)||(12306915-12307046)
chr1 (457-585)||(45431278-45431407)
chr1 (457-587)||(51368842-51368974)
chr1 (406-586)||(14350279-14350465)
chr1 (457-584)||(38335170-38335298)
chr1 (457-567)||(6770356-6770466)
chr1 (400-556)||(45449238-45449400)
chr1 (403-581)||(48383108-48383294)
chr1 (471-589)||(30657603-30657723)
chr1 (457-585)||(13961211-13961340)
chr1 (402-554)||(47532667-47532824)
chr1 (457-586)||(29683193-29683325)
chr1 (457-559)||(43286749-43286851)
chr1 (463-556)||(8472977-8473070)
chr1 (477-558)||(15282591-15282672)
chr1 (442-562)||(41730329-41730456)
chr1 (457-553)||(50128229-50128325)
chr1 (457-562)||(23473521-23473626)
chr1 (477-593)||(35700728-35700843)
chr1 (458-540)||(37503260-37503341)
chr1 (457-542)||(37315325-37315409)
chr1 (457-564)||(30217782-30217891)
chr1 (463-553)||(39497340-39497430)
chr1 (435-562)||(52749626-52749757)
chr1 (479-560)||(26228219-26228300)
chr1 (512-583)||(19011108-19011180)
chr1 (408-535)||(52431632-52431765)
chr1 (457-558)||(14881036-14881124)
chr1 (484-562)||(39912363-39912441)
chr1 (471-584)||(28481844-28481954)
chr1 (489-584)||(39081803-39081898)
chr1 (489-559)||(3838866-3838936)
chr1 (428-491)||(19010711-19010778)
chr1 (512-561)||(10976014-10976063)
chr1 (401-446)||(23789491-23789537)
chr1 (458-586)||(28725963-28726094)
chr1 (457-561)||(49867454-49867558)
[»] chr6 (37 HSPs)
chr6 (405-587)||(3515763-3515953)
chr6 (406-562)||(26467124-26467286)
chr6 (406-584)||(392096-392282)
chr6 (406-587)||(32929508-32929697)
chr6 (457-592)||(12525711-12525848)
chr6 (459-586)||(20897946-20898075)
chr6 (459-565)||(34477609-34477715)
chr6 (457-562)||(18276672-18276777)
chr6 (406-586)||(23402136-23402324)
chr6 (412-562)||(32985199-32985355)
chr6 (403-559)||(35043917-35044077)
chr6 (457-582)||(2350654-2350781)
chr6 (403-586)||(1391175-1391365)
chr6 (406-558)||(2580980-2581138)
chr6 (442-586)||(7851197-7851347)
chr6 (457-584)||(21878404-21878533)
chr6 (405-560)||(12145116-12145277)
chr6 (406-585)||(27433491-27433678)
chr6 (406-562)||(4215719-4215881)
chr6 (442-564)||(29451153-29451279)
chr6 (414-561)||(11115106-11115256)
chr6 (406-556)||(25165413-25165569)
chr6 (469-586)||(34396596-34396715)
chr6 (457-587)||(3026066-3026196)
chr6 (405-585)||(31280320-31280502)
chr6 (457-554)||(34851906-34852003)
chr6 (462-562)||(23629638-23629738)
chr6 (457-562)||(13417016-13417124)
chr6 (428-565)||(1840271-1840412)
chr6 (457-544)||(961051-961138)
chr6 (443-555)||(28225252-28225367)
chr6 (442-560)||(5323426-5323548)
chr6 (457-584)||(29978233-29978361)
chr6 (487-562)||(13529479-13529554)
chr6 (457-554)||(9661018-9661115)
chr6 (495-542)||(10431780-10431827)
chr6 (477-534)||(11633970-11634028)
[»] chr2 (45 HSPs)
chr2 (406-584)||(20552931-20553117)
chr2 (406-584)||(31438646-31438832)
chr2 (404-562)||(30486234-30486398)
chr2 (406-584)||(44587902-44588088)
chr2 (404-585)||(32360867-32361056)
chr2 (406-586)||(34442533-34442719)
chr2 (463-588)||(561581-561708)
chr2 (414-586)||(38590883-38591062)
chr2 (406-581)||(3668113-3668295)
chr2 (406-562)||(22068320-22068481)
chr2 (442-586)||(31390010-31390160)
chr2 (405-585)||(22887749-22887937)
chr2 (457-562)||(38296201-38296306)
chr2 (406-560)||(4381821-4381981)
chr2 (457-584)||(8969464-8969591)
chr2 (406-554)||(26387064-26387218)
chr2 (406-562)||(27856396-27856558)
chr2 (428-562)||(6580213-6580351)
chr2 (412-584)||(43637165-43637343)
chr2 (398-587)||(2898069-2898265)
chr2 (459-585)||(26891722-26891850)
chr2 (462-562)||(32860126-32860226)
chr2 (406-562)||(35851750-35851913)
chr2 (406-584)||(5093540-5093724)
chr2 (406-559)||(22567629-22567788)
chr2 (457-581)||(5881221-5881350)
chr2 (408-556)||(1859192-1859346)
chr2 (457-555)||(27584769-27584867)
chr2 (442-560)||(11021260-11021382)
chr2 (457-587)||(29102340-29102471)
chr2 (406-562)||(28600991-28601152)
chr2 (457-558)||(13574086-13574187)
chr2 (95-157)||(12356299-12356361)
chr2 (407-547)||(4022480-4022625)
chr2 (457-542)||(15079016-15079100)
chr2 (457-542)||(39531868-39531952)
chr2 (442-547)||(25782871-25782977)
chr2 (460-585)||(34123085-34123211)
chr2 (457-535)||(15146683-15146760)
chr2 (457-542)||(10820528-10820611)
chr2 (443-547)||(25772149-25772258)
chr2 (24-66)||(12356205-12356247)
chr2 (489-542)||(40210252-40210306)
chr2 (480-586)||(44854419-44854528)
chr2 (478-542)||(20431482-20431547)
[»] chr7 (47 HSPs)
chr7 (403-586)||(24798400-24798590)
chr7 (406-565)||(42044294-42044458)
chr7 (403-589)||(4628561-4628755)
chr7 (442-585)||(47839492-47839640)
chr7 (414-562)||(30810679-30810833)
chr7 (442-585)||(5239284-5239433)
chr7 (414-555)||(47083086-47083232)
chr7 (405-584)||(24438477-24438664)
chr7 (406-586)||(12218437-12218624)
chr7 (432-583)||(28587911-28588067)
chr7 (405-588)||(29993486-29993677)
chr7 (406-586)||(34333282-34333469)
chr7 (406-567)||(34606280-34606447)
chr7 (428-573)||(23363191-23363341)
chr7 (462-585)||(27456175-27456299)
chr7 (457-560)||(8754642-8754745)
chr7 (397-559)||(525067-525234)
chr7 (457-586)||(18485959-18486090)
chr7 (459-555)||(34546373-34546469)
chr7 (457-584)||(43594093-43594222)
chr7 (428-557)||(45045799-45045932)
chr7 (471-558)||(11686395-11686482)
chr7 (412-556)||(13064882-13065033)
chr7 (442-562)||(47657004-47657126)
chr7 (412-562)||(1737004-1737159)
chr7 (457-559)||(7689257-7689359)
chr7 (406-536)||(37674106-37674240)
chr7 (457-547)||(18117182-18117272)
chr7 (462-562)||(37631604-37631704)
chr7 (435-556)||(46716668-46716793)
chr7 (457-560)||(5729372-5729475)
chr7 (457-581)||(28262034-28262155)
chr7 (457-542)||(18469997-18470081)
chr7 (457-547)||(33636491-33636581)
chr7 (457-541)||(22739868-22739953)
chr7 (457-558)||(36437405-36437505)
chr7 (476-566)||(3021911-3022000)
chr7 (471-560)||(4100595-4100684)
chr7 (471-556)||(29835775-29835860)
chr7 (516-567)||(22973617-22973668)
chr7 (457-554)||(23357767-23357861)
chr7 (457-559)||(4087650-4087750)
chr7 (457-511)||(47118046-47118100)
chr7 (457-542)||(18220728-18220812)
chr7 (495-542)||(41468726-41468774)
chr7 (494-565)||(18220625-18220696)
chr7 (401-586)||(34556887-34557078)
[»] scaffold0188 (1 HSPs)
scaffold0188 (406-590)||(6110-6302)
[»] chr3 (47 HSPs)
chr3 (405-585)||(272219-272407)
chr3 (405-588)||(46352630-46352821)
chr3 (406-584)||(43786871-43787057)
chr3 (406-584)||(48725271-48725457)
chr3 (400-585)||(49893330-49893523)
chr3 (406-587)||(52520678-52520867)
chr3 (418-584)||(2505350-2505523)
chr3 (406-584)||(39074419-39074604)
chr3 (457-560)||(41553997-41554100)
chr3 (413-560)||(858615-858768)
chr3 (403-565)||(10617281-10617449)
chr3 (440-561)||(2119456-2119579)
chr3 (428-585)||(41304004-41304165)
chr3 (406-584)||(4168183-4168369)
chr3 (403-580)||(7468417-7468598)
chr3 (407-562)||(49529269-49529431)
chr3 (406-586)||(40362580-40362768)
chr3 (457-564)||(22248908-22249015)
chr3 (457-584)||(20923992-20924121)
chr3 (457-554)||(13159929-13160026)
chr3 (412-561)||(42548120-42548274)
chr3 (457-562)||(42964306-42964411)
chr3 (457-562)||(53489881-53489986)
chr3 (406-586)||(11308211-11308398)
chr3 (406-588)||(18014668-18014858)
chr3 (443-559)||(28139336-28139456)
chr3 (457-560)||(43269796-43269899)
chr3 (405-529)||(6842676-6842806)
chr3 (457-558)||(2938097-2938198)
chr3 (457-554)||(29241669-29241766)
chr3 (475-567)||(52246601-52246693)
chr3 (457-559)||(50395620-50395721)
chr3 (457-562)||(24488390-24488495)
chr3 (435-584)||(38852216-38852372)
chr3 (457-558)||(50299002-50299103)
chr3 (463-547)||(41993682-41993766)
chr3 (457-561)||(50359243-50359347)
chr3 (457-534)||(33140937-33141014)
chr3 (501-567)||(52718186-52718252)
chr3 (459-538)||(2362880-2362958)
chr3 (475-550)||(31514827-31514902)
chr3 (508-562)||(2391631-2391685)
chr3 (508-562)||(2393392-2393446)
chr3 (457-542)||(21010041-21010122)
chr3 (405-511)||(52552549-52552659)
chr3 (478-542)||(25743854-25743918)
chr3 (526-584)||(2362801-2362861)
[»] scaffold0264 (1 HSPs)
scaffold0264 (406-586)||(22959-23147)
[»] scaffold0674 (1 HSPs)
scaffold0674 (459-565)||(7956-8062)
[»] scaffold0549 (1 HSPs)
scaffold0549 (459-565)||(7309-7415)
[»] scaffold0190 (1 HSPs)
scaffold0190 (428-584)||(14896-15058)
[»] scaffold0021 (1 HSPs)
scaffold0021 (435-562)||(116228-116359)
[»] scaffold1152 (1 HSPs)
scaffold1152 (404-560)||(704-865)
[»] scaffold0003 (1 HSPs)
scaffold0003 (406-585)||(53685-53872)
[»] scaffold0206 (1 HSPs)
scaffold0206 (459-585)||(11029-11155)
[»] scaffold0002 (1 HSPs)
scaffold0002 (457-554)||(146962-147059)
[»] scaffold0524 (1 HSPs)
scaffold0524 (457-560)||(851-954)
[»] scaffold1266 (1 HSPs)
scaffold1266 (457-562)||(316-421)
[»] scaffold0014 (1 HSPs)
scaffold0014 (404-562)||(68288-68452)
[»] scaffold0325 (1 HSPs)
scaffold0325 (435-590)||(17502-17660)
[»] scaffold0050 (2 HSPs)
scaffold0050 (457-564)||(69248-69355)
scaffold0050 (489-560)||(33770-33841)
[»] scaffold0045 (2 HSPs)
scaffold0045 (457-567)||(50567-50677)
scaffold0045 (475-559)||(53421-53505)
[»] scaffold0038 (1 HSPs)
scaffold0038 (443-555)||(25750-25865)
[»] scaffold0425 (1 HSPs)
scaffold0425 (405-525)||(10771-10897)
[»] scaffold0113 (1 HSPs)
scaffold0113 (457-547)||(40958-41048)
[»] scaffold0034 (1 HSPs)
scaffold0034 (435-558)||(95616-95742)
[»] scaffold0263 (1 HSPs)
scaffold0263 (464-547)||(19649-19732)
[»] scaffold0007 (1 HSPs)
scaffold0007 (462-521)||(233918-233977)
[»] scaffold0533 (1 HSPs)
scaffold0533 (489-535)||(5090-5136)
[»] scaffold0015 (1 HSPs)
scaffold0015 (457-558)||(74530-74632)
[»] scaffold0204 (1 HSPs)
scaffold0204 (489-542)||(14143-14196)


Alignment Details
Target: chr8 (Bit Score: 108; Significance: 9e-54; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 406 - 586
Target Start/End: Original strand, 27988500 - 27988687
Alignment:
Q  406 gggtcatgctaaccggtgcccc-gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaat 500  Q
    ||||| |||||||||||||||| ||||| ||||| | ||||||||||||||||    ||||||||||||||||||||||||||||||||||| |||||||    
T  27988500 gggtcctgctaaccggtgcccccgggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaat 27988599  T
Q  501 tacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccctt 586  Q
    |||||| |||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||  |||||| ||||||||||||    
T  27988600 tacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 27988687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 406 - 586
Target Start/End: Original strand, 28045802 - 28045989
Alignment:
Q  406 gggtcatgctaaccggtgcccc-gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaat 500  Q
    ||||| |||||||||||||||| ||||| ||||| | ||||||||||||||||    ||||||||||||||||||||||||||||||||||| |||||||    
T  28045802 gggtcctgctaaccggtgcccccgggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaat 28045901  T
Q  501 tacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccctt 586  Q
    |||||| |||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||  |||||| ||||||||||||    
T  28045902 tacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 28045989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 406 - 587
Target Start/End: Complemental strand, 168652 - 168463
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||||||||||| | |||||||||||| |||    ||||||||||||||||||||||||||| ||||||| ||||||    
T  168652 gggtcctgctaaccggtgcccccggggcattggttaagcataccataaaatggaattattaccataaaaggaaactgtttttgacattattataaattaa 168553  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttcccttt 587  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| | ||||||||||||| ||||  |||||| |||||||||||||    
T  168552 ttacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttcccttt 168463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 403 - 584
Target Start/End: Complemental strand, 34228871 - 34228682
Alignment:
Q  403 tttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaat 496  Q
    |||||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||||||||||||||||||| |||    
T  34228871 tttgggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaat 34228772  T
Q  497 taattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg--cccgggagaccggtaagcatttccc 584  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||  ||||||  |||||| ||||||||||    
T  34228771 taattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 34228682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 405 - 583
Target Start/End: Original strand, 16888543 - 16888728
Alignment:
Q  405 tgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| ||||||||||||||||  ||||||||||| | ||||||| ||||| ||    ||||||||||||||||||||||||||||||||||| |||||    
T  16888543 tgggtcctgctaaccggtgcccccggggcattggttaagcataccacaaaagagaattattaccataaaaggaaactgtttttgactttattataaatta 16888642  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag-accggtaagcatttcc 583  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| | |||||| |||||||||    
T  16888643 attacacaatttcaatgcattaactactatataatttcctttttcatatccttaacctgtgcccgggggcaccggttagcatttcc 16888728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 406 - 586
Target Start/End: Original strand, 4537744 - 4537932
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||||||||||| |  |||||  |||| | ||||||||||||||||    ||||||||||||||||||||||||||||||||||| ||||||    
T  4537744 gggtcctgctaaccggtgcctctggggcacaggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 4537843  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccctt 586  Q
    ||||| | |||||||| |||||||||||||||||||||| ||| ||||| ||||||||||||| ||||  |||||| ||||||||||||    
T  4537844 ttacataatttcaatgcattaactactatataatttcctattttatatccttaaccagtgccccggaggcaccggttagcatttccctt 4537932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 407 - 584
Target Start/End: Original strand, 30675574 - 30675758
Alignment:
Q  407 ggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaagggatta---ccataaaaggaaactgtttttgactttattatgaattaatt 501  Q
    |||| |||||||||||| |||  ||||| ||||| | |||||||||||||| ||||   |||||||||||||||||||||||| ||||||| ||||||||    
T  30675574 ggtcctgctaaccggtgtccccggggcactggttaagcataccataaaaggaattattaccataaaaggaaactgtttttgacattattataaattaatt 30675673  T
Q  502 acacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 584  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||||  |||  |||||| ||||||||||    
T  30675674 acacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 30675758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 457 - 560
Target Start/End: Original strand, 33357186 - 33357289
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  33357186 attaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 33357285  T
Q  557 gtgc 560  Q
    ||||    
T  33357286 gtgc 33357289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 457 - 586
Target Start/End: Complemental strand, 4648323 - 4648193
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||| ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  4648323 attaccatcaaaagaaactgtttttgacattattataaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaatca 4648224  T
Q  557 gtg-cccgggagaccggtaagcatttccctt 586  Q
    ||| ||||||| |||||| ||||||||||||    
T  4648223 gtgccccgggacaccggttagcatttccctt 4648193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 404 - 562
Target Start/End: Complemental strand, 43119404 - 43119241
Alignment:
Q  404 ttgggtcatgctaaccggtgccccgggc-attggttgaacataccataaaagggatt----accataaaaggaaactgtttttgactttattatgaatta 498  Q
    ||||||| |||||||||||||||||||| ||||||| | ||||||||||||| || |    |||||||||| |||||||||||||||||||||| |||||    
T  43119404 ttgggtcctgctaaccggtgccccgggccattggttaagcataccataaaagagaattatcaccataaaagaaaactgtttttgactttattataaatta 43119305  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    |||| ||| |||||||| ||||||||||||||||||| |||||||||||| |||| ||||||||    
T  43119304 attatacaatttcaatgcattaactactatataattttctttttcatatctttaatcagtgccc 43119241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 412 - 554
Target Start/End: Original strand, 16890486 - 16890634
Alignment:
Q  412 tgctaaccggtgccccgg--gcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacac 505  Q
    ||||||||||||||||||  |||  |||| | |||||||||||| |||    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16890486 tgctaaccggtgccccggaggcaccggttaagcataccataaaaaggaattattaccataaaaggaaactgtttttgactttattatcaattaattacac 16890585  T
Q  506 attttcaatgtattaactactatataatttcctttttcatatcattaac 554  Q
    | |||||||| |||||||||||||||||||||||||||||||| |||||    
T  16890586 aatttcaatgcattaactactatataatttcctttttcatatccttaac 16890634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 406 - 586
Target Start/End: Original strand, 9063052 - 9063239
Alignment:
Q  406 gggtcatgctaaccggtgc--cccgggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||||||||||  || ||||| ||||| | |||| || ||||||||    |||||||||||| ||| |||||||||||||||||| ||||||    
T  9063052 gggtcctgctaaccggtgcttccggggcactggttaagcatatcacaaaagggaattattaccataaaagaaaattgtttttgactttattataaattaa 9063151  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc-ccgggagaccggtaagcatttccctt 586  Q
    || |||  |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||| ||||||||||||    
T  9063152 ttgcacgatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccgggacaccggttagcatttccctt 9063239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 434 - 562
Target Start/End: Original strand, 29444170 - 29444302
Alignment:
Q  434 tggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactata 529  Q
    ||||| ||||||||||||||||||    |||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||  ||||||||||||    
T  29444170 tggttaaacataccataaaagggaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcgttaactactata 29444269  T
Q  530 taatttcctttttcatatcattaaccagtgccc 562  Q
    ||||||||||||||||||| |||| ||||||||    
T  29444270 taatttcctttttcatatccttaatcagtgccc 29444302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 457 - 559
Target Start/End: Complemental strand, 36730573 - 36730471
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| |    
T  36730573 attaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacta 36730474  T
Q  557 gtg 559  Q
    |||    
T  36730473 gtg 36730471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 404 - 584
Target Start/End: Original strand, 16394059 - 16394247
Alignment:
Q  404 ttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatt 497  Q
    ||||||| ||||||||||||||||  ||||||||||| | ||||||||||||| ||    ||| ||||||||||||||||||||||||||||||| ||||    
T  16394059 ttgggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagagaattattagcataaaaggaaactgtttttgactttattatcaatt 16394158  T
Q  498 aattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 584  Q
    |||||||   |||||||| |||||||| |||||||||| |||||||| ||| |||||||||||||  |||  |||||| ||||||||||    
T  16394159 aattacattatttcaatgcattaactattatataattttctttttcacatccttaaccagtgccccgggggcaccggttagcatttccc 16394247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 459 - 583
Target Start/End: Complemental strand, 21595973 - 21595848
Alignment:
Q  459 taccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||| |||||||||||||||||||||| | |||||||||    
T  21595973 taccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactcctatataatttcctttttcatacccttaaccagt 21595874  T
Q  559 gcccgggag-accggtaagcatttcc 583  Q
    ||||||| | |||||| |||||||||    
T  21595873 gcccgggggcaccggttagcatttcc 21595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 463 - 586
Target Start/End: Complemental strand, 16785209 - 16785085
Alignment:
Q  463 ataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||||| |||||||||||| ||||||||||| |||||||||||||    
T  16785209 ataaaaggaaactgtttttgactttattataaattaattacacaatttcaatacattaactgctatataatttcttttttcatatccttaaccagtgccc 16785110  T
Q  563 gggag-accggtaagcatttccctt 586  Q
     |||| |||||| ||||||||||||    
T  16785109 tggagcaccggttagcatttccctt 16785085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 457 - 584
Target Start/End: Complemental strand, 37373334 - 37373206
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| |||||||    
T  37373334 attaccataaaagaaaactgttttcgactttattatcaattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaacca 37373235  T
Q  557 gtgcccgggag-accggtaagcatttccc 584  Q
    ||| ||||| | |||||| ||||||||||    
T  37373234 gtgtccgggggcaccggttagcatttccc 37373206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 406 - 559
Target Start/End: Complemental strand, 11112825 - 11112666
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||||| |||||||  |||||  |||| | ||||||||||||| ||    ||| |||||||| |||||||||||||||||||||| ||||||    
T  11112825 gggtcctgctaaccagtgcccccagggcacaggttaagcataccataaaagtgaattattatcataaaagaaaactgtttttgactttattataaattaa 11112726  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 559  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  11112725 ttacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg 11112666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 457 - 584
Target Start/End: Complemental strand, 10870481 - 10870357
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||| |||||||||| |||||| |||||||||||||    
T  10870481 attaccataaaaggaaactgtttttgattttattataaattaattacacaatttcaatgtattaactattatataattttcttttttatatcattaacca 10870382  T
Q  557 gtgcccgggagaccggtaagcatttccc 584  Q
       || |||| |||||| ||||||||||    
T  10870381 ---ccggggataccggttagcatttccc 10870357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 405 - 582
Target Start/End: Original strand, 20831552 - 20831737
Alignment:
Q  405 tgggtcatgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| |||||||||||| ||||||  || || || | ||||||||||||| ||    ||||||||||||||||||| ||||||||||||||| |||||    
T  20831552 tgggtcctgctaaccggtgtcccgggagcactgattaagcataccataaaagagaattattaccataaaaggaaactgcttttgactttattataaatta 20831651  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggag-accggtaagcatttc 582  Q
    |||| ||  |||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||| | |||||| ||||||||    
T  20831652 attatactatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttc 20831737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 442 - 560
Target Start/End: Original strand, 42035019 - 42035141
Alignment:
Q  442 cataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc 537  Q
    ||||||||||||||||    |||||||||||| ||| |||||||||||||||||| ||||||||||||| |||||||  |||||||||||||||||||||    
T  42035019 cataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttcc 42035118  T
Q  538 tttttcatatcattaaccagtgc 560  Q
    ||||||||||| |||||||||||    
T  42035119 tttttcatatccttaaccagtgc 42035141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 413 - 559
Target Start/End: Original strand, 2805267 - 2805419
Alignment:
Q  413 gctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacaca 506  Q
    ||||||||||||| |  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||| |||||||||||||||   |||||||||||    
T  2805267 gctaaccggtgcctccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgcttttgactttattataggttaattacaca 2805366  T
Q  507 ttttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 559  Q
     |||||||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  2805367 atttcaatgcattaactattatataatttcctttttcatatccttaaccagtg 2805419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 412 - 562
Target Start/End: Original strand, 9253908 - 9254063
Alignment:
Q  412 tgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacac 505  Q
    |||||||||||||||| ||  |||||||| | ||||||||||||| ||    |||| |||||||||||||||||||||||||||||| | ||||||||||    
T  9253908 tgctaaccggtgcccctgggacattggttaagcataccataaaagagaattattactataaaaggaaactgtttttgactttattatca-ttaattacac 9254006  T
Q  506 attttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    | |||||||| ||||||||||||| |||||| ||||||||||| |||||||||||||    
T  9254007 aatttcaatgcattaactactataaaatttcatttttcatatccttaaccagtgccc 9254063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 442 - 585
Target Start/End: Complemental strand, 12204002 - 12203854
Alignment:
Q  442 cataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc 537  Q
    ||||||||||||||||    ||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||||||||||||     
T  12204002 cataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttct 12203903  T
Q  538 tttttcatatcattaaccagtgcccgggag-accggtaagcatttccct 585  Q
    ||||||||| | |||||| || |||||| | |||||| |||||||||||    
T  12203902 tttttcatacccttaaccggtacccgggggcaccggttagcatttccct 12203854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 442 - 585
Target Start/End: Complemental strand, 12448430 - 12448282
Alignment:
Q  442 cataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc 537  Q
    ||||||||||||||||    ||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||||||||||||     
T  12448430 cataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttct 12448331  T
Q  538 tttttcatatcattaaccagtgcccgggag-accggtaagcatttccct 585  Q
    ||||||||| | |||||| || |||||| | |||||| |||||||||||    
T  12448330 tttttcatacccttaaccggtacccgggggcaccggttagcatttccct 12448282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 465 - 585
Target Start/End: Original strand, 3930298 - 3930419
Alignment:
Q  465 aaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgg 564  Q
    |||||||||||||||||||||||||||| |||||||||||||  ||||||| |||||||||||||||||||||| |||||||| |||||| |||||||||    
T  3930298 aaaaggaaactgtttttgactttattatcaattaattacacaacttcaatgcattaactactatataatttcctctttcatattattaactagtgcccgg 3930397  T
Q  565 gag-accggtaagcatttccct 585  Q
    | | |||| | |||||||||||    
T  3930398 gggcaccgattagcatttccct 3930419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 457 - 561
Target Start/End: Complemental strand, 40831406 - 40831302
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||| ||| |||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||||||||| |||||||||||| |||||||    
T  40831406 attaccataaaagaaaattgtttttgactttattataaattaattatacaatttcaatgcattaactactatataattttctttttcatatctttaacca 40831307  T
Q  557 gtgcc 561  Q
    |||||    
T  40831306 gtgcc 40831302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 462 - 553
Target Start/End: Original strand, 7304580 - 7304671
Alignment:
Q  462 cataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaa 553  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| ||||    
T  7304580 cataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatatccttaa 7304671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 406 - 562
Target Start/End: Complemental strand, 13643197 - 13643036
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||| ||  ||||| ||||| | ||||||||||||| ||    |||||||||||||||  | |||||||||||||||| ||||||    
T  13643197 gggtcctgctaaccggtgctcctagggcactggttaagcataccataaaagagaattattaccataaaaggaattt-tttttgactttattataaattaa 13643099  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    ||||| | |||||||| ||||||||||||||||||||||||||| |||| |||||||||||||    
T  13643098 ttacataatttcaatgcattaactactatataatttcctttttcgtatccttaaccagtgccc 13643036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 406 - 562
Target Start/End: Complemental strand, 13743622 - 13743461
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||| ||  ||||| ||||| | ||||||||||||| ||    |||||||||||||||  | |||||||||||||||| ||||||    
T  13743622 gggtcctgctaaccggtgctcctagggcactggttaagcataccataaaagagaattattaccataaaaggaattt-tttttgactttattataaattaa 13743524  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    ||||| | |||||||| ||||||||||||||||||||||||||| |||| |||||||||||||    
T  13743523 ttacataatttcaatgcattaactactatataatttcctttttcgtatccttaaccagtgccc 13743461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 28626947 - 28626792
Alignment:
Q  412 tgctaaccggtgc-cccgggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacaca 506  Q
    ||||||||||||| ||||| || || || | ||||||||||||||||    ||| ||||||| ||||||||||||||||||||||| ||||||| |||||    
T  28626947 tgctaaccggtgctcccggacactgattaagcataccataaaagggaattattatcataaaaagaaactgtttttgactttattataaattaatcacaca 28626848  T
Q  507 ttttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
     |||||||  |||||||||||||||||||||||||||| ||| |||||| ||||||    
T  28626847 atttcaatacattaactactatataatttcctttttcacatccttaaccggtgccc 28626792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 434 - 556
Target Start/End: Complemental strand, 32114065 - 32113938
Alignment:
Q  434 tggttgaacataccataaaaggga----ttaccataaaagg-aaactgtttttgactttattatgaattaattacacattttcaatgtattaactactat 528  Q
    ||||| ||||||| ||||||||||    ||| ||||||||| ||||||||||| |||||||||| ||||||||| ||| |||||||| ||||||||||||    
T  32114065 tggttaaacatactataaaagggaattattatcataaaagggaaactgttttttactttattataaattaattaaacaatttcaatgcattaactactat 32113966  T
Q  529 ataatttcctttttcatatcattaacca 556  Q
    |||||||||||||||||||| |||||||    
T  32113965 ataatttcctttttcatatccttaacca 32113938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 405 - 558
Target Start/End: Original strand, 9537823 - 9537982
Alignment:
Q  405 tgggtcatgctaaccggtgcc-ccggg-cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| |||||||||||| | ||||| || ||||| | |||||||||||||| |    |||| |||||| ||||||  |||||| |||||||| |||||    
T  9537823 tgggtcctgctaaccggtgtctccgggacactggttaagcataccataaaaggaaattattactataaaaagaaactccttttgaatttattataaatta 9537922  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||||| |||||||||    
T  9537923 attacacaattttaatgcattaactactatataatttcctttttcatatccttaaccagt 9537982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 464 - 559
Target Start/End: Complemental strand, 17467725 - 17467630
Alignment:
Q  464 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 559  Q
    |||||||||| ||||||||| |||||||| ||||||||||||| |||||||| ||||| ||||  |||||||||||||||||||||||||| ||||    
T  17467725 taaaaggaaattgtttttgattttattatcaattaattacacaatttcaatgcattaattactgcataatttcctttttcatatcattaactagtg 17467630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 412 - 523
Target Start/End: Complemental strand, 39407020 - 39406905
Alignment:
Q  412 tgctaaccggtgccccgggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacat 507  Q
    ||||||||||||||| ||||| | ||| ||||||||||||||||||    ||| ||||||||||||||||||||||||||||||| |||||||||||||     
T  39407020 tgctaaccggtgcccggggcactagttaaacataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattacacaa 39406921  T
Q  508 tttcaatgtattaact 523  Q
    ||| || | |||||||    
T  39406920 ttttaacgcattaact 39406905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 457 - 542
Target Start/End: Original strand, 42433601 - 42433685
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 542  Q
    ||||||||||||| ||||||||||||||||| |||| ||||||||||||| |||||||| |||||||| |||||||||||||||||    
T  42433601 attaccataaaagaaaactgtttttgacttt-ttataaattaattacacaatttcaatgcattaactattatataatttccttttt 42433685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 459 - 547
Target Start/End: Complemental strand, 34192902 - 34192814
Alignment:
Q  459 taccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatat 547  Q
    ||||||||||  ||| | |||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  34192902 taccataaaataaaattatttttgactttattataaattaattacacaatttcaatgcattaactagtatataatttcctttttcatat 34192814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 481 - 559
Target Start/End: Complemental strand, 9278317 - 9278239
Alignment:
Q  481 tgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 559  Q
    |||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||| ||||    
T  9278317 tgactttattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatctttaacgagtg 9278239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 458 - 562
Target Start/End: Complemental strand, 22956833 - 22956730
Alignment:
Q  458 ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccag 557  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||| | ||| |||||||||||||| |||| | ||||||||| |||   ||||||||    
T  22956833 ttaccataaaaggaaactgtttttgacattattataaattaattacataattttaatgtattaactaccatatga-ttccttttttatactcttaaccag 22956735  T
Q  558 tgccc 562  Q
    |||||    
T  22956734 tgccc 22956730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 481 - 562
Target Start/End: Complemental strand, 10618123 - 10618042
Alignment:
Q  481 tgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    |||||||||||| ||||||||||||| ||| | || ||||||||||||||||||| |||||||||||| |||||| ||||||    
T  10618123 tgactttattatcaattaattacacaatttaattgcattaactactatataattttctttttcatatccttaacctgtgccc 10618042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 457 - 584
Target Start/End: Complemental strand, 29235364 - 29235235
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||| ||||||||||| || ||||||| |||||||| |||||||||||||  || |||| |||||||||||||||||||| ||||| ||||| |||| ||    
T  29235364 attatcataaaaggaacctatttttgattttattataaattaattacacaaatttaatgcattaactactatataatttctttttttatatccttaatca 29235265  T
Q  557 gtgc-ccggg-agaccggtaagcatttccc 584  Q
     ||| ||||| | |||||| ||||||||||    
T  29235264 atgctccgggaacaccggttagcatttccc 29235235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 457 - 535
Target Start/End: Complemental strand, 22451912 - 22451835
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataattt 535  Q
    |||||||||||||||| || ||||||||||| |||| ||||||||||||| |||||||| ||||||| |||||||||||    
T  22451912 attaccataaaaggaagctatttttgacttt-ttataaattaattacacaatttcaatgcattaactgctatataattt 22451835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 509 - 560
Target Start/End: Complemental strand, 12652707 - 12652656
Alignment:
Q  509 ttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc 560  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  12652707 ttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 12652656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 462 - 514
Target Start/End: Original strand, 24843341 - 24843393
Alignment:
Q  462 cataaaaggaaactgtttttgactttattatgaattaattacacattttcaat 514  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  24843341 cataaaaggaaactgattttgactttattataaattaattacacaatttcaat 24843393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 34890647 - 34890700
Alignment:
Q  489 ttatgaattaattacacattttcaatgtattaactactatataatttccttttt 542  Q
    ||||||||| |||||||| |||||||||| ||| ||||||||||||| ||||||    
T  34890647 ttatgaattgattacacaatttcaatgtaataaatactatataattttcttttt 34890700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 464 - 532
Target Start/End: Original strand, 30933386 - 30933453
Alignment:
Q  464 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 532  Q
    |||||| ||| ||||||| ||||| |||| ||||||||||||| |||||||| ||||| ||||||||||    
T  30933386 taaaagaaaaatgtttttaacttt-ttataaattaattacacaatttcaatgcattaattactatataa 30933453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 479 - 542
Target Start/End: Complemental strand, 42449072 - 42449009
Alignment:
Q  479 tttgactttattatgaattaattacaca-ttttcaatgtattaactactatataatttccttttt 542  Q
    ||||||||| ||||| ||||| |||||| ||||||||||| ||||||||||||||||||| ||||    
T  42449072 tttgacttt-ttatggattaactacacaattttcaatgtaataactactatataatttccatttt 42449009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 457 - 542
Target Start/End: Complemental strand, 4811687 - 4811602
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacaca-ttttcaatgtattaactactatataatttccttttt 542  Q
    |||||||||||| |||||| || |||| ||  |||||||||||||| ||| ||||||||| | ||| ||||||||||||| ||||||    
T  4811687 attaccataaaaagaaact-ttgttgatttatttatgaattaattatacaattttcaatgcaataattactatataattttcttttt 4811602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 477 - 542
Target Start/End: Original strand, 33124570 - 33124635
Alignment:
Q  477 tttttgactttattatgaattaattacaca-ttttcaatgtattaactactatataatttccttttt 542  Q
    ||||||||||| |||| |||| |||||||| ||||||||| | |||||||||||||| |||||||||    
T  33124570 tttttgacttt-ttataaattgattacacaattttcaatgcaataactactatataacttccttttt 33124635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 519 - 561
Target Start/End: Original strand, 36923782 - 36923824
Alignment:
Q  519 taactactatataatttcctttttcatatcattaaccagtgcc 561  Q
    |||||| ||||||||||||||||||||||| |||| |||||||    
T  36923782 taactattatataatttcctttttcatatccttaatcagtgcc 36923824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 8e-51; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 401 - 584
Target Start/End: Original strand, 34650828 - 34651018
Alignment:
Q  401 aatttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatga 494  Q
    |||| ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||||||||||| ||||||| |    
T  34650828 aattagggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataa 34650927  T
Q  495 attaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag-accggtaagcatttccc 584  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||||||| | |||||| ||||||||||    
T  34650928 attaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttccc 34651018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 406 - 587
Target Start/End: Complemental strand, 35132707 - 35132519
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||||||||||| | ||||||||||||| ||    |||||||||| | |||||||||||||||||||||| ||||||    
T  35132707 gggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagagaattattaccataaa-gaaaactgtttttgactttattataaattaa 35132609  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggag-accggtaagcatttcccttt 587  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| | |||||| |||||||||||||    
T  35132608 ttacacaatttcaatgtattaactactatataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttcccttt 35132519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 406 - 587
Target Start/End: Complemental strand, 13661994 - 13661805
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||||||||||| |  |||||  |||| | ||||||||||||| ||    |||||||||||||||||||||| |||||||||||| ||||||    
T  13661994 gggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaagagaattattaccataaaaggaaactgtttctgactttattatcaattaa 13661895  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc-ccgggag-accggtaagcatttcccttt 587  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| | |||||| |||||||||||||    
T  13661894 ttacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttcccttt 13661805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 406 - 584
Target Start/End: Original strand, 11957967 - 11958153
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||| ||||||||||||    ||||||||||||||||||||||||||||||||||| ||||||    
T  11957967 gggtcctgctaaccggtgcccctggggcactggttaagcatgccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 11958066  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 584  Q
    ||||||| ||||| || |||||||||||||||||||||||||| ||||| |||||| ||||||  |||  |||||| ||||||||||    
T  11958067 ttacacaatttcattgcattaactactatataatttccttttttatatctttaacctgtgccccgggggcaccggttagcatttccc 11958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 459 - 586
Target Start/End: Original strand, 19647717 - 19647846
Alignment:
Q  459 taccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    ||||||||||||||||||||| |||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  19647717 taccataaaaggaaactgtttatgactttattatcaattaattatacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 19647816  T
Q  559 gcccgggag--accggtaagcatttccctt 586  Q
    |||| ||||  |||||| ||||||| ||||    
T  19647817 gccccggagataccggttagcattttcctt 19647846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 406 - 584
Target Start/End: Original strand, 35504241 - 35504426
Alignment:
Q  406 gggtcatgctaaccggtgccccggg-cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaat 500  Q
    ||||| |||||||||||||||| || ||  |||| | ||||||||||||||||    || |||||||||| ||||||||||||| ||||||| |||||||    
T  35504241 gggtcctgctaaccggtgcccccggacacgggttaagcataccataaaagggaattattgccataaaagggaactgtttttgacattattataaattaat 35504340  T
Q  501 tacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggag-accggtaagcatttccc 584  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||| |||||| | |||||| ||||||||||    
T  35504341 tacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgtcccgggggcaccggttagcatttccc 35504426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 457 - 588
Target Start/End: Complemental strand, 13470280 - 13470147
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||| |||||||||| ||||||||||||||||| |||||||    
T  13470280 attaccataaaaggaaactgtttttgactttattataaattaattatacaatttcaatgcattgactactatattatttcctttttcatatccttaacca 13470181  T
Q  557 gtgcccgggag--accggtaagcatttccctttt 588  Q
    ||||||   ||  |||||| ||||||||||||||    
T  13470180 gtgccccataggcaccggttagcatttccctttt 13470147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 406 - 586
Target Start/End: Complemental strand, 8787525 - 8787337
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  |||||  |||| | |||||||||||| |||    ||| ||||||||||||||||||||||  ||||||| ||||||    
T  8787525 gggtcctgctaaccggtgcccccggggcacaggttaagcataccataaaatggaattattatcataaaaggaaactgtttttgatattattataaattaa 8787426  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctt 586  Q
    ||||||| |||||||| |||||||||||||||||||| ||||||||| | ||||||| |||||  |||| |||||| ||||||||||||    
T  8787425 ttacacaatttcaatgcattaactactatataatttcatttttcatacccttaaccaatgccccggggacaccggttagcatttccctt 8787337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 405 - 558
Target Start/End: Original strand, 9721607 - 9721765
Alignment:
Q  405 tgggtcatgctaaccggtgccccgg-gcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    |||||||||||||||||||||| || ||||   || ||||||||||||||||||    ||| |||||||| |||||||||||||||||||||| ||||||    
T  9721607 tgggtcatgctaaccggtgccctggtgcatgaattaaacataccataaaagggaattattatcataaaagaaaactgtttttgactttattataaattaa 9721706  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    ||| ||| |||||||| ||||| |||||||||||||||||||||||||  |||||||||    
T  9721707 ttaaacaatttcaatgcattaattactatataatttcctttttcatattcttaaccagt 9721765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 409 - 584
Target Start/End: Complemental strand, 6283745 - 6283562
Alignment:
Q  409 tcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaatta 502  Q
    |||||||||||||||||||  ||||| ||||| | ||||||||||||  ||    |||||||||||| ||| |||||||||||||||||| |||||||||    
T  6283745 tcatgctaaccggtgcccctagggcactggttaagcataccataaaaatgaattattaccataaaagaaaattgtttttgactttattataaattaatta 6283646  T
Q  503 cacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccc 584  Q
    |||| |||||||| ||||| || |||||||||| |||||||||||| ||||| ||||||| ||||  |||||| ||||||||||    
T  6283645 cacaatttcaatgcattaattattatataattttctttttcatatctttaactagtgccccggaggcaccggttagcatttccc 6283562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 459 - 584
Target Start/End: Complemental strand, 10070095 - 10069969
Alignment:
Q  459 taccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    |||||||||| ||||||||||||||||||||||| | ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  10070095 taccataaaaagaaactgtttttgactttattatca-ttaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 10069997  T
Q  559 gccc--gggagaccggtaagcatttccc 584  Q
    ||||  |||  |||||| ||||||||||    
T  10069996 gccccgggggcaccggttagcatttccc 10069969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 405 - 586
Target Start/End: Original strand, 10054352 - 10054540
Alignment:
Q  405 tgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| ||||||||||| ||||  |||||  |||| |||||||||||||| |||    ||||||||||||||||||||||| ||| ||||||| |||||    
T  10054352 tgggtcctgctaaccggtacccccggggcacgggttaaacataccataaaaaggaattattaccataaaaggaaactgtttt-gacattattataaatta 10054450  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctt 586  Q
    |||||||| |||||||| ||||| || ||||||||||||||||||||| | |||||||||||||  |||  |||||| ||||||||||||    
T  10054451 attacacaatttcaatgcattaattattatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctt 10054540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 464 - 584
Target Start/End: Original strand, 21547458 - 21547579
Alignment:
Q  464 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc- 562  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||  |||||     
T  21547458 taaaatgaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccgatgcccg 21547557  T
Q  563 gggagaccggtaagcatttccc 584  Q
    |||| |||||| ||||||||||    
T  21547558 gggacaccggttagcatttccc 21547579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 406 - 585
Target Start/End: Original strand, 40564404 - 40564589
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||||||||||||   ||| ||||||| | ||||||||||||| ||    |||||||||||  ||| |||||||||||||||||| ||||||    
T  40564404 gggtcctgctaaccggtgcccttggggtattggttaagcataccataaaagagaattattaccataaaaaaaaattgtttttgactttattataaattaa 40564503  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggagaccggtaagcatttccct 585  Q
    ||||||| |||||||| |||||||||||||||||||||||||||| ||| |||| |  || || ||| |||||| |||||||||||    
T  40564504 ttacacaatttcaatgcattaactactatataatttcctttttcaaatccttaatcgatgtcccggacaccggttagcatttccct 40564589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 457 - 548
Target Start/End: Complemental strand, 11846201 - 11846110
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatc 548  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  11846201 attaccataaaaggaaactacttttgactttattataaattaattacacaatttcaatgtattaactactatataatttccttttttatatc 11846110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 457 - 546
Target Start/End: Complemental strand, 12506425 - 12506336
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcata 546  Q
    ||||| |||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  12506425 attactataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcata 12506336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 457 - 559
Target Start/End: Complemental strand, 20175356 - 20175254
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||| |||||||| ||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||| ||||| ||||  |||||||    
T  20175356 attatcataaaagaaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttctttttttatatttttaacca 20175257  T
Q  557 gtg 559  Q
    |||    
T  20175256 gtg 20175254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 468 - 558
Target Start/End: Complemental strand, 31909749 - 31909659
Alignment:
Q  468 aggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    ||||||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||||| |||| ||||| |||||||||    
T  31909749 aggaaactgtttttgactttattataaatcaattacacaatttcaatgcattaactactatataatttcccttttaatatccttaaccagt 31909659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 457 - 559
Target Start/End: Original strand, 39066992 - 39067095
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact-actatataatttcctttttcatatcattaacc 555  Q
    ||||||||||||||| | |||||||||||||||||| ||||||||||| | ||||||| |||||||| | ||||||||||| ||||||||||| ||||||    
T  39066992 attaccataaaaggatattgtttttgactttattataaattaattacataatttcaatatattaactaattatataatttcttttttcatatccttaacc 39067091  T
Q  556 agtg 559  Q
    ||||    
T  39067092 agtg 39067095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 474 - 586
Target Start/End: Complemental strand, 4837369 - 4837256
Alignment:
Q  474 ctgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggagaccgg 572  Q
    |||| |||||||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||  |||||| ||| ||||||  |||||    
T  4837369 ctgtatttgactttattataaattaattacacaatttcaatgcattaattactatataatttcctttttcatattcttaaccggtgccccggggcaccgg 4837270  T
Q  573 taagcatttccctt 586  Q
    | | ||||||||||    
T  4837269 ttaacatttccctt 4837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 405 - 562
Target Start/End: Complemental strand, 40057494 - 40057331
Alignment:
Q  405 tgggtcatgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| |||||||||||||| || |  || ||||| |||| | |||||||||||    |||| ||||||| |||||| |||||| |||||||| |||||    
T  40057494 tgggtcctgctaaccggtgcctcgaggtcactggttaaacacatcataaaagggaaatattactataaaagaaaactgcttttgattttattataaatta 40057395  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    |||| ||  |||||||| | |||||||||||||||||||||||||||||| |||| | ||||||    
T  40057394 attatactatttcaatgcactaactactatataatttcctttttcatatccttaatcggtgccc 40057331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 457 - 541
Target Start/End: Complemental strand, 10956080 - 10955997
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttt 541  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||||| ||| |||||||| |||||||||| ||||||| ||||||    
T  10956080 attaccataaaaggaaattgtttttgactttgttataaattaatta-acaatttcaatgcattaactactttataattccctttt 10955997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 478 - 569
Target Start/End: Original strand, 2619635 - 2619726
Alignment:
Q  478 ttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggagac 569  Q
    |||| |||||||||| ||||||||||||| |||||||  ||||||||||| ||||||| |||||||||||| ||||| |||| || ||||||    
T  2619635 ttttaactttattataaattaattacacaatttcaatacattaactactaaataattttctttttcatatccttaacaagtgtcccggagac 2619726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 457 - 586
Target Start/End: Complemental strand, 39069507 - 39069379
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||||||| ||||||| ||   ||||| |  |||||||||| ||| |||| ||||||||||||||||||||| |||||||| | |||||||    
T  39069507 attaccataaaaggaaattgtttttcaca--attattatataattacacaattttaatgcattaactactatataatttcc-ttttcatacccttaacca 39069411  T
Q  557 gtgcccggga--gaccggtaagcatttccctt 586  Q
    |||||| |||   |||||| ||||||||||||    
T  39069410 gtgccctggaagcaccggttagcatttccctt 39069379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 457 - 559
Target Start/End: Original strand, 19436895 - 19436995
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||  ||||| ||||| ||||||| || ||||||||| ||| ||||||||  ||||| ||||||||||||||||||||||||| ||||| |    
T  19436895 attaccataaaaa-aaactatttttaactttat-ataaattaattatacaatttcaatgctttaaccactatataatttcctttttcatatccttaacga 19436992  T
Q  557 gtg 559  Q
    |||    
T  19436993 gtg 19436995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 457 - 528
Target Start/End: Complemental strand, 4268690 - 4268620
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactat 528  Q
    ||||||||||||||||||||||||| | ||| |||| ||||||||||||| ||| |||| ||||||||||||    
T  4268690 attaccataaaaggaaactgtttttta-ttttttataaattaattacacaattttaatgcattaactactat 4268620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 489 - 559
Target Start/End: Complemental strand, 6284892 - 6284822
Alignment:
Q  489 ttatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 559  Q
    |||| ||||||||| ||| |||||||  ||||| ||||||||||||||||||||  |||| ||||||||||    
T  6284892 ttataaattaattatacaatttcaatacattaattactatataatttcctttttagtatccttaaccagtg 6284822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 21944918 - 21945051
Alignment:
Q  458 ttaccataaaaggaaactgtttttgactttattatgaattaattacaca-ttttcaatgtattaactactatataattt-cctttttcatatcattaacc 555  Q
    |||||||||||||||  | || |||||||  ||||| |||||||| ||| |||| |||| | ||| || |||||||||| |||||||  |||| ||||||    
T  21944918 ttaccataaaaggaagtt-ttgttgacttatttatggattaattaaacaatttttaatgcaataattaatatataattttcctttttattatccttaacc 21945016  T
Q  556 agtgcccgggag--accggtaagcatttccctttt 588  Q
    ||||||| ||||  |||||| ||||||||||||||    
T  21945017 agtgccccggaggcaccggttagcatttccctttt 21945051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 6042136 - 6042210
Alignment:
Q  489 ttatgaattaattacaca-ttttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    ||||| |||||||||||| ||||||||| | ||| |||||||||||||  |||||  |||| |||||||||||||    
T  6042136 ttatggattaattacacaattttcaatgcaataattactatataattttttttttagtatctttaaccagtgccc 6042210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 478 - 535
Target Start/End: Complemental strand, 20719384 - 20719327
Alignment:
Q  478 ttttgactttattatgaattaattacaca-ttttcaatgtattaactactatataattt 535  Q
    |||||||||| |||||||||||||||||| |||| |||||| ||| |||||||||||||    
T  20719384 ttttgacttt-ttatgaattaattacacaatttttaatgtaataattactatataattt 20719327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 1e-49; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 405 - 586
Target Start/End: Complemental strand, 43944693 - 43944505
Alignment:
Q  405 tgggtcatgctaaccggtgccc-cgggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    |||||| ||||||||||||||| |||||| ||||| | ||||||||| ||||||    ||||||||||||||||||||||||||| ||||||| ||||||    
T  43944693 tgggtcttgctaaccggtgccctcgggcactggttaagcataccatacaagggaattattaccataaaaggaaactgtttttgacattattataaattaa 43944594  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccctt 586  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| | ||||||||||||| ||||  |||||| ||||||||||||    
T  43944593 ttacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttccctt 43944505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 442 - 596
Target Start/End: Original strand, 19503143 - 19503302
Alignment:
Q  442 cataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc 537  Q
    ||||||||||||||||    |||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||    
T  19503143 cataccataaaagggaattattacaataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgtattaactagtatataatttcc 19503242  T
Q  538 tttttcatatcattaaccagtgcccgggag-accggtaagcatttcccttttaattttca 596  Q
    ||||||||||| ||||||||| |||||||| |||||| ||||||||| || |||||||||    
T  19503243 tttttcatatccttaaccagtacccgggagcaccggttagcatttccattataattttca 19503302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 397 - 591
Target Start/End: Complemental strand, 29591384 - 29591182
Alignment:
Q  397 ttttaatttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaagg----gattaccataaaaggaaactgtttttgactttatt 490  Q
    |||||||  ||||| ||||||||||||||||  ||||| | ||| | ||||||||||||||     ||||||||||||||||||||||||||||||||||    
T  29591384 ttttaataagggtcctgctaaccggtgcccccggggcactagttaagcataccataaaaggtaattattaccataaaaggaaactgtttttgactttatt 29591285  T
Q  491 atgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctttt 588  Q
    || |||||| |||||| |||||||| ||||||||||||||||||||||| |||||||  |||||||||||||  |||  ||| || ||||||||||||||    
T  29591284 ataaattaagtacacaatttcaatgcattaactactatataatttccttattcatattcttaaccagtgccccgggggcaccagttagcatttccctttt 29591185  T
Q  589 aat 591  Q
    |||    
T  29591184 aat 29591182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 405 - 584
Target Start/End: Complemental strand, 54897495 - 54897308
Alignment:
Q  405 tgggtcatgctaaccggtgcc-ccggg-cattggttgaacataccataaaagg----gattaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| |||||||||||||| ||||| || ||||| ||||||||||||||||     ||||||||||||||||| |||||||||||||||||| |||||    
T  54897495 tgggtcctgctaaccggtgcctccgggacactggttaaacataccataaaaggaaattattaccataaaaggaaattgtttttgactttattataaatta 54897396  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 584  Q
    |||| ||| |||||||| |||||||||||||||||||||||| ||||||| |||||||||||||  |||  |||||| ||||||||||    
T  54897395 attatacaatttcaatgcattaactactatataatttcctttctcatatccttaaccagtgccccgggggcaccggttagcatttccc 54897308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 403 - 588
Target Start/End: Original strand, 789527 - 789720
Alignment:
Q  403 tttgggtcatgctaaccggtgcccc-gggc-attggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaat 496  Q
    ||||||||  ||||||||||||| | |||| | ||||| | ||||||||||||||||    ||||||||||||||||||||||||||| ||||||| |||    
T  789527 tttgggtcccgctaaccggtgcctctgggctactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaat 789626  T
Q  497 taattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctttt 588  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||| | |||||| ||||||  |||  |||||| ||||||||||||||    
T  789627 taattacacaatttcaatgcattaactactatataatttcctttttcatacccttaacccgtgccccgggggcaccggttagcatttccctttt 789720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 457 - 587
Target Start/End: Complemental strand, 15186372 - 15186240
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||    
T  15186372 attaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatggattaactactatataatttcctttttcatacccttaacca 15186273  T
Q  557 gtgccc--gggagaccggtaagcatttcccttt 587  Q
    ||||||  |||  |||||| |||||||||||||    
T  15186272 gtgccccgggggcaccggttagcatttcccttt 15186240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 406 - 585
Target Start/End: Complemental strand, 4089328 - 4089141
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||| ||||||||  ||||| ||||| ||||||||||||||| ||    ||||||||||||||||||||||||||| ||||||| ||||||    
T  4089328 gggtcctgctaactggtgcccctggggcactggttaaacataccataaaagagaattattaccataaaaggaaactgtttttgacattattataaattaa 4089229  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccct 585  Q
    ||||||| |||||||| ||||||||||||||||||| |||||||||| | |||| ||||||||  |||  |||||| |||||||||||    
T  4089228 ttacacaatttcaatgcattaactactatataattttctttttcatacccttaatcagtgccccaggggcaccggttagcatttccct 4089141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 457 - 584
Target Start/End: Complemental strand, 28755749 - 28755621
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||| |||||||||||||||||| | |||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  28755749 attatcataaaaggaaactgtttctaactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 28755650  T
Q  557 gtgccc-gggagaccggtaagcatttccc 584  Q
    |||||| |||| |||||| ||||||||||    
T  28755649 gtgccctgggacaccggttagcatttccc 28755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 405 - 558
Target Start/End: Complemental strand, 12356431 - 12356272
Alignment:
Q  405 tgggtcatgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| |||||||||||||||| ||  || ||||| | ||||||||||||| ||    ||| ||||||||||||||||||||||||||||||| |||||    
T  12356431 tgggtcctgctaaccggtgcccccggaacactggttaagcataccataaaagagaattattatcataaaaggaaactgtttttgactttattataaatta 12356332  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    |||| | | ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12356331 attatataatttcaatgtattaactactatataatttcctttttcatatccttaaccagt 12356272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 405 - 585
Target Start/End: Original strand, 4268821 - 4269009
Alignment:
Q  405 tgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| |||||||||||||||   ||||| ||||| | ||||||||||||||||    ||||||||||| ||||||||||||||| ||||||| |||||    
T  4268821 tgggtcctgctaaccggtgccctcggggcactggttaatcataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaatta 4268920  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccct 585  Q
    |||||| | |||||||| ||||||||||||||| |||||||||||||| | |||||||||||||  |||  |||||| |||||||||||    
T  4268921 attacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 4269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 432 - 588
Target Start/End: Original strand, 47231900 - 47232062
Alignment:
Q  432 attggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 527  Q
    ||||||| ||||||||||||||||||    ||| ||||||||||||||||||||||||||||||| |||||||||||   |||||||| |||||||| ||    
T  47231900 attggttaaacataccataaaagggaattattatcataaaaggaaactgtttttgactttattatcaattaattacattatttcaatgcattaactatta 47231999  T
Q  528 tataatttcctttttcatatcattaaccagtgc-ccgggag-accggtaagcatttccctttt 588  Q
    ||||||||||||||||| ||| ||||||||||| ||||| | |||||| ||||||||||||||    
T  47232000 tataatttcctttttcacatccttaaccagtgctccgggggcaccggttagcatttccctttt 47232062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 413 - 562
Target Start/End: Complemental strand, 50619264 - 50619110
Alignment:
Q  413 gctaaccggtgcccc-gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacat 507  Q
    ||||||||||||||| ||||| ||||| | ||||||||||||||||    |||||||||||||||||||||||| |||||||||| |||||| ||||||     
T  50619264 gctaaccggtgcccctgggcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttttactttattataaattaagtacacaa 50619165  T
Q  508 tttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    |||||||| ||||||||||||||||||| |||||||||||  |||| ||||||||    
T  50619164 tttcaatgcattaactactatataattttctttttcatattcttaatcagtgccc 50619110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 406 - 585
Target Start/End: Original strand, 18067879 - 18068066
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||| |  |||| ||||||||||||||||||    |||||||||||||||||| |||||||| |||| || ||||||    
T  18067879 gggtcttgctaaccggtgcccccggggaacgggttaaacataccataaaagggaattattaccataaaaggaaactatttttgacattatgataaattaa 18067978  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccct 585  Q
    ||||||| ||| |||| |||||||||||||||||||||||||||||| | |||||||||||||  |||  |||||| |||||||||||    
T  18067979 ttacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 18068066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 457 - 584
Target Start/End: Original strand, 32202537 - 32202666
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||     
T  32202537 attatcataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccc 32202636  T
Q  557 gtgccc--gggagaccggtaagcatttccc 584  Q
    ||||||  |||| |||||| | ||||||||    
T  32202637 gtgccccggggacaccggttaacatttccc 32202666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 406 - 586
Target Start/End: Complemental strand, 16536234 - 16536046
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||||| ||||| |  |||||||||||  ||    ||||||||||||||||||||||||||| ||||||| ||||||    
T  16536234 gggtcctgctaaccggtgcccccggggcactggttaagaataccataaaatagaattattaccataaaaggaaactgtttttgacattattataaattaa 16536135  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctt 586  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| | |||| | ||||||  |||  |||||| ||||||||||||    
T  16536134 ttacacaatttcaatgcattaactactatataatttcctttttcatacccttaatccgtgccccgggggcaccggttagcatttccctt 16536046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 406 - 586
Target Start/End: Original strand, 33108673 - 33108860
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||||||||||| |  |||||  |||| | |||||||||||| |||    ||||||||||||||||||||||||||||||||||| ||||||    
T  33108673 gggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaaaggaattattaccataaaaggaaactgtttttgactttattatcaattaa 33108772  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccctt 586  Q
    ||| ||  |||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||  |||||| | ||||||||||    
T  33108773 ttatactatttcaatgcattaactattatataatttcctttttcatatc-ttaaccagtgccccggaggcaccggttaacatttccctt 33108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 457 - 590
Target Start/End: Complemental strand, 7769067 - 7768932
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||||| | |||||||    
T  7769067 attaccataaaaggaaactgtttttaacattattataaattaattacacaatttcaatacattaactactatataatttcctttttcatacccttaacca 7768968  T
Q  557 gtgccc--gggagaccggtaagcatttcccttttaa 590  Q
    ||||||  |||  |||| | ||||||||||||||||    
T  7768967 gtgccccgggggtaccgattagcatttcccttttaa 7768932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 406 - 556
Target Start/End: Complemental strand, 36395285 - 36395129
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||| ||||||||  ||||| ||||| | ||||||||||||||||    ||| |||||||| |||||| ||||||||||||||| ||||||    
T  36395285 gggtcctgctaactggtgcccccagggcactggttaagcataccataaaagggaattattatcataaaagaaaactgcttttgactttattataaattaa 36395186  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||  |||||||    
T  36395185 ttacacaatttcaatgcattaactactatataatttcctttttcatatttttaacca 36395129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 457 - 556
Target Start/End: Complemental strand, 39844036 - 39843937
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  39844036 attaccataaaaggaaactgtttttgactttattataaattaattacataatttcaatgcattaactactatataatttcatttttcatatccttaacca 39843937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 406 - 586
Target Start/End: Original strand, 43202384 - 43202571
Alignment:
Q  406 gggtcatgctaaccggtgcccc-gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaat 500  Q
    ||||| |||||||||||||||| ||||| ||||| | | ||||||||||| ||    |||||||||||| |||||||||||||| ||||||| |||||||    
T  43202384 gggtcctgctaaccggtgcccccgggcactggttaagcttaccataaaagagaattattaccataaaagaaaactgtttttgacattattataaattaat 43202483  T
Q  501 tacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctt 586  Q
    |||||| ||| |||| ||||| |||||||||||||||||||||||| | ||||| |||||||  |||  |||||| ||||||||||||    
T  43202484 tacacaattttaatgcattaattactatataatttcctttttcatacccttaactagtgccccgggggcaccggttagcatttccctt 43202571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 434 - 586
Target Start/End: Complemental strand, 46149095 - 46148939
Alignment:
Q  434 tggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactata 529  Q
    ||||| ||||||||||||||| ||    ||||||||||| |||| |||||||||||||||||| ||||||||||||| |||||||||||||| || ||||    
T  46149095 tggttaaacataccataaaagagaattattaccataaaaagaaattgtttttgactttattataaattaattacacaatttcaatgtattaattattata 46148996  T
Q  530 taatttcctttttcatatcattaaccagtgcccgggagaccggtaagcatttccctt 586  Q
    ||||||||||||||||||  ||| | | ||||||||  |||||| ||||||||||||    
T  46148995 taatttcctttttcatattcttatcaaatgcccggggcaccggttagcatttccctt 46148939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 435 - 587
Target Start/End: Original strand, 52533816 - 52533974
Alignment:
Q  435 ggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatat 530  Q
    |||| ||||||||||||||||||    ||||||||||||||||||||||| ||||||||||| |||||||||  || ||||| || ||||||||||||||    
T  52533816 ggttaaacataccataaaagggaattattaccataaaaggaaactgttttcgactttattatcaattaattattcaatttcagtgcattaactactatat 52533915  T
Q  531 aatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttcccttt 587  Q
    |||||||||||||||||  |||||||||| || ||||  |||||| | |||||||||||    
T  52533916 aatttcctttttcatattcttaaccagtgtcctggaggcaccggttaacatttcccttt 52533974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 442 - 584
Target Start/End: Original strand, 3783539 - 3783687
Alignment:
Q  442 cataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc 537  Q
    ||||||||||||||||    |||||||||||| |||||||||||||||||||||| ||||||||| ||| ||| |||| ||||||||||||||||||||     
T  3783539 cataccataaaagggaattattaccataaaagaaaactgtttttgactttattatcaattaattaaacaattttaatgcattaactactatataatttca 3783638  T
Q  538 tttttcatatcattaaccagtgcccgggag--accggtaagcatttccc 584  Q
    ||||||||||  |||||| |||||| ||||  |||||| ||||||||||    
T  3783639 tttttcatatgtttaaccggtgccccggaggcaccggttagcatttccc 3783687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 462 - 562
Target Start/End: Original strand, 42898808 - 42898908
Alignment:
Q  462 cataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcc 561  Q
    ||||||| |||||| |||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  42898808 cataaaaagaaactatttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgcc 42898907  T
Q  562 c 562  Q
    |    
T  42898908 c 42898908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 471 - 562
Target Start/End: Complemental strand, 32217160 - 32217069
Alignment:
Q  471 aaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||||||||    
T  32217160 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgccc 32217069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 459 - 562
Target Start/End: Original strand, 54945837 - 54945940
Alignment:
Q  459 taccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    |||||||||| |||| |||||||||||||||||| ||||||||||||| |||||||  ||||||| |||||||||||||||||||||||| |||||||||    
T  54945837 taccataaaacgaaattgtttttgactttattataaattaattacacaatttcaatacattaactgctatataatttcctttttcatatccttaaccagt 54945936  T
Q  559 gccc 562  Q
    ||||    
T  54945937 gccc 54945940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 458 - 585
Target Start/End: Complemental strand, 55882811 - 55882683
Alignment:
Q  458 ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccag 557  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||| |||||||||||||  ||||||||||| ||||| ||    
T  55882811 ttaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaattactatataattt-ttttttcatatccttaacgag 55882713  T
Q  558 tgcccgggag--accggtaagcatttccct 585  Q
    ||||| ||||  |||||| |||||||||||    
T  55882712 tgccccggagacaccggttagcatttccct 55882683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 457 - 584
Target Start/End: Original strand, 24679700 - 24679827
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||| ||||| ||||||| |||||||||| ||||||||||||| |||||||  |||||||||||||||||||| ||||||||||| |||||||    
T  24679700 attaccataaa-ggaaattgtttttaactttattataaattaattacacaatttcaatacattaactactatataatttcttttttcatatccttaacca 24679798  T
Q  557 gtg-cccgggagaccggtaagcatttccc 584  Q
    ||| |||| || |||||| ||||||||||    
T  24679799 gtgccccgagacaccggttagcatttccc 24679827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 459 - 584
Target Start/End: Complemental strand, 54054675 - 54054548
Alignment:
Q  459 taccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||  |||||||| |||||||| ||||||||||| ||||||||||| |||||| ||    
T  54054675 taccataaaaggaaattgtttttgactttattatcaattaattacactatttcaatgcattaactattatataatttcttttttcatatccttaaccggt 54054576  T
Q  559 g--cccgggagaccggtaagcatttccc 584  Q
    |  ||||||  |||||| ||||||||||    
T  54054575 gcccccggggcaccggttagcatttccc 54054548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 30387191 - 30387270
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttc 536  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||    
T  30387191 attaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttc 30387270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 457 - 586
Target Start/End: Complemental strand, 37988064 - 37987934
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||| ||||||||||||||||||| || ||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||||| | |||||||    
T  37988064 attacaataaaaggaaactgtttttaacattattataaattaattacacaatttcaatacattaactactatataatttcctttttcatacccttaacca 37987965  T
Q  557 gtgcccgggag-accggtaagcatttccctt 586  Q
     | ||| |||| |||||| | ||||||||||    
T  37987964 ttaccctggagcaccggttaacatttccctt 37987934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 464 - 562
Target Start/End: Original strand, 54655940 - 54656038
Alignment:
Q  464 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    |||||| ||| |||||||||||||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||| ||||| |||||||||||||    
T  54655940 taaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttccttttttatatccttaaccagtgccc 54656038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 462 - 555
Target Start/End: Complemental strand, 4220319 - 4220226
Alignment:
Q  462 cataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacc 555  Q
    |||||||| ||| |||||||||||||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||||||| ||||||    
T  4220319 cataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaacc 4220226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 457 - 562
Target Start/End: Complemental strand, 6164222 - 6164118
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||||||| |||||||| ||||||||||||||||||| | |||| ||||| |||||||    
T  6164222 attaccataaaaggaaactgttttttgctttattataaattaattacacaatttcaatgcattaactactatataattttc-ttttgatatccttaacca 6164124  T
Q  557 gtgccc 562  Q
    ||||||    
T  6164123 gtgccc 6164118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 405 - 586
Target Start/End: Original strand, 5091611 - 5091798
Alignment:
Q  405 tgggtcatgctaaccggtgc-cccgggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    |||||| ||||||||||||| ||||| || ||||| | ||||| ||||||||||    |||| ||||||||||||||||| |||||||||||| ||||||    
T  5091611 tgggtcctgctaaccggtgctcccggacactggttaagcatac-ataaaagggaattattactataaaaggaaactgtttatgactttattataaattaa 5091709  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggag-accggtaagcatttccctt 586  Q
    ||||||| ||| ||| |||||| || ||||||||||  ||||||||||  |||||||||| |||||||| |||||| || |||||||||    
T  5091710 ttacacaattttaatatattaattattatataattttatttttcatattcttaaccagtgccccgggagtaccggttagtatttccctt 5091798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 459 - 558
Target Start/End: Complemental strand, 42815237 - 42815137
Alignment:
Q  459 taccataaaag-gaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccag 557  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| | |||||||  ||||||||  |||||||||||||||||||||| ||||||||    
T  42815237 taccataaaagagaaactgtttttgactttattataaattaattacataatttcaatacattaactatgatataatttcctttttcatatccttaaccag 42815138  T
Q  558 t 558  Q
    |    
T  42815137 t 42815137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 457 - 564
Target Start/End: Original strand, 31680520 - 31680627
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| ||| |||||||| |||||||| ||| ||| || |||||||||| | |||||||    
T  31680520 attaccataaaaggaaattgtttttgactttattataaattaattatacaatttcaatgcattaactattatgtaactttctttttcatacccttaacca 31680619  T
Q  557 gtgcccgg 564  Q
    ||| ||||    
T  31680620 gtgtccgg 31680627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 459 - 561
Target Start/End: Original strand, 46688264 - 46688371
Alignment:
Q  459 taccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc-----tttttcatatcattaa 553  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||| |||||||||| |||||||| |     ||||||||||| ||||    
T  46688264 taccataaaaggaaactgcttttgactttattataaattaattacacaatttcaatgcattaactactgtataattttctttaatttttcatatccttaa 46688363  T
Q  554 ccagtgcc 561  Q
    ||||||||    
T  46688364 ccagtgcc 46688371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 457 - 562
Target Start/End: Original strand, 30154220 - 30154324
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||| |||| ||||||| ||||||||| |||||||| ||||||||||| | |||||||  |||||||||||||||||||||||||||||||| ||||| |    
T  30154220 attatcatataaggaaattgtttttgattttattataaattaattacataatttcaatacattaactactatataatttcctttttcatatc-ttaacta 30154318  T
Q  557 gtgccc 562  Q
    ||||||    
T  30154319 gtgccc 30154324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 463 - 560
Target Start/End: Complemental strand, 49915282 - 49915185
Alignment:
Q  463 ataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc 560  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| |||||||  ||||| |||||||||| || |||||||||||| |||| ||||||    
T  49915282 ataaaaggaaactgttttttactttattataaattaattacacaatttcaatacattaattactatataaatttctttttcatatccttaatcagtgc 49915185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 457 - 584
Target Start/End: Original strand, 53655935 - 53656062
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||  ||| | ||||| |||||||||| ||||||||||||| |||||||  |||||||| ||||||||||| ||||||||||| ||||| |    
T  53655935 attaccataaaataaaattatttttaactttattataaattaattacacaatttcaatacattaactattatataatttcttttttcatatccttaacaa 53656034  T
Q  557 gtgcccgggagaccggtaagcatttccc 584  Q
    ||| ||| || |||  | ||||||||||    
T  53656035 gtgtccgagacaccaattagcatttccc 53656062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 471 - 559
Target Start/End: Complemental strand, 50603342 - 50603254
Alignment:
Q  471 aaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 559  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||| ||||| || |||| ||||||||||| || | | ||||||||||    
T  50603342 aaactgtttttgacattattataaattaattacacaatttcaatgcattaattattatacaatttccttttccacacccttaaccagtg 50603254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 511 - 561
Target Start/End: Original strand, 1432653 - 1432703
Alignment:
Q  511 caatgtattaactactatataatttcctttttcatatcattaaccagtgcc 561  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  1432653 caatgtattaactattatataatttcctttttcatatccttaaccagtgcc 1432703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 457 - 511
Target Start/End: Complemental strand, 8133836 - 8133782
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttc 511  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||    
T  8133836 attaccataaaagaaaactatttttgactttattataaattaattacacattttc 8133782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 406 - 526
Target Start/End: Complemental strand, 16821038 - 16820912
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaagg----gattaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||     ||||||||||||||||||||  | |||||||||||| | ||||    
T  16821038 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgcgtatgactttattataagttaa 16820939  T
Q  500 ttacacattttcaatgtattaactact 526  Q
    ||||| | |||||||| ||||| ||||    
T  16820938 ttacagaatttcaatgcattaattact 16820912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 457 - 535
Target Start/End: Complemental strand, 41265587 - 41265510
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataattt 535  Q
    ||||| ||||||| ||||||||||||| ||| |||| ||||||||||||| ||||| || |||||||||||||||||||    
T  41265587 attacaataaaagaaaactgtttttgatttt-ttataaattaattacacaatttcactgcattaactactatataattt 41265510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 457 - 514
Target Start/End: Original strand, 39877306 - 39877363
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaat 514  Q
    ||||| |||||| ||||||||||||||||||||||| ||||||||||||| |||||||    
T  39877306 attactataaaatgaaactgtttttgactttattataaattaattacacaatttcaat 39877363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 494 - 562
Target Start/End: Complemental strand, 50167681 - 50167615
Alignment:
Q  494 aattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    ||||||||||||| |||||||| |||||||||  |||||||| |||||||||||| |||||||||||||    
T  50167681 aattaattacacaatttcaatgcattaactac--tataattttctttttcatatctttaaccagtgccc 50167615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 463 - 542
Target Start/End: Complemental strand, 53268842 - 53268764
Alignment:
Q  463 ataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 542  Q
    ||||||| ||| ||||||||||||| |||| ||||||||||||| ||| |||| |||||||| ||||||||||| |||||    
T  53268842 ataaaagaaaattgtttttgacttt-ttataaattaattacacaattttaatgcattaactaatatataatttctttttt 53268764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 477 - 555
Target Start/End: Complemental strand, 52697160 - 52697083
Alignment:
Q  477 tttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacc 555  Q
    |||||||||||||||| ||||| ||| | | ||| ||||||||||||||||||||||||  ||||||||||| ||||||    
T  52697160 tttttgactttattataaatta-ttatataattttaatgtattaactactatataattttgtttttcatatccttaacc 52697083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 31517274 - 31517217
Alignment:
Q  477 tttttgactttattatgaattaattacacattttcaatgtattaactactatataatt 534  Q
    |||||||||||||||| ||||||||||||  |||||||| |||||||| |||||||||    
T  31517274 tttttgactttattatcaattaattacactatttcaatgcattaactattatataatt 31517217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 560
Target Start/End: Original strand, 3999451 - 3999546
Alignment:
Q  465 aaaaggaaactgtttttgactttattatgaattaattacaca-ttttcaatgtattaactactatataatttcctttttca-tatcattaaccagtgc 560  Q
    ||||||||||| ||||||||||| ||||| ||| |||||||| ||||||||| |  ||||||||| ||||||||||||| | ||||||||||| ||||    
T  3999451 aaaaggaaact-tttttgacttt-ttatggatttattacacaattttcaatgcaacaactactatgtaatttccttttttagtatcattaaccggtgc 3999546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 532 - 587
Target Start/End: Complemental strand, 8133787 - 8133731
Alignment:
Q  532 atttcctttttcatatcattaaccagtgcccggg-agaccggtaagcatttcccttt 587  Q
    |||| |||||||||||| |||||||||| ||||| |||||||| |||||||||||||    
T  8133787 attttctttttcatatccttaaccagtgtccgggaagaccggttagcatttcccttt 8133731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 527 - 565
Target Start/End: Original strand, 39877554 - 39877592
Alignment:
Q  527 atataatttcctttttcatatcattaaccagtgcccggg 565  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  39877554 atataattttctttttcatatcgttaaccagtgcccggg 39877592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 1e-49; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 406 - 590
Target Start/End: Original strand, 17333284 - 17333473
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||||||||||| |  ||||||||||| |   ||||||||||||||    ||| ||||||||||||||||||||||||||||||||||||||    
T  17333284 gggtcctgctaaccggtgcctccggggcattggttaag--taccataaaagggaagtattatcataaaaggaaactgtttttgactttattatgaattaa 17333381  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag-accggtaagcatttcccttttaa 590  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| | |||||| |||||||||| |||||    
T  17333382 ttacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccgggggcaccggttagcatttcccatttaa 17333473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 406 - 587
Target Start/End: Original strand, 51065748 - 51065937
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||||||||||||||||||| ||||||    
T  51065748 gggtcctgctaaccggtgcccctggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaa 51065847  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg--cccgggagaccggtaagcatttcccttt 587  Q
    ||||||| |||||||  ||||||||||||||||||| |||||||||||| ||||||||||  || |||| |||||| |||||||||||||    
T  51065848 ttacacaatttcaatacattaactactatataatttactttttcatatccttaaccagtgtcccggggacaccggttagcatttcccttt 51065937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 406 - 586
Target Start/End: Complemental strand, 15227925 - 15227737
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||||||||||| |  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||||||||||||||||||| ||||||    
T  15227925 gggtcttgctaaccggtgcctccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 15227826  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg--cccgggagaccggtaagcatttccctt 586  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||  ||||||  |||||| ||||||||||||    
T  15227825 ttacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggtaccggttagcatttccctt 15227737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 406 - 584
Target Start/End: Complemental strand, 5694507 - 5694321
Alignment:
Q  406 gggtcatgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||||||||||||| ||  || ||||| | ||||||||||||||||    ||||||||||||||||||||||||||||||||||| ||||||    
T  5694507 gggtcctgctaaccggtgcccccggagcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 5694408  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccc 584  Q
    ||||||| |||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||| ||||  |||||| ||||||||||    
T  5694407 ttacacaatttcaatgcattaactactatataatttccctttttatatccttaaccagtgccccggaggcaccggttagcatttccc 5694321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 406 - 585
Target Start/End: Complemental strand, 29657957 - 29657770
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    |||||| |||||||||||||||||||||||||||| ||||||    
T  29657957 gggtcctgctaaccggtgcccccagggcactggttaagcataccataaaagggaattattaccaaaaaaggaaactgtttttgactttattatcaattaa 29657858  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccct 585  Q
    ||| ||| |||||||| |||||||||||||||||||||||||| ||||| |||||||||||||  |||  |||||| |||||||||||    
T  29657857 ttatacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgccccgggggcaccggttagcatttccct 29657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 457 - 561
Target Start/End: Original strand, 9266785 - 9266889
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| |||||||    
T  9266785 attaccataaaaggaaactgtttttgactttattatgaattaattacacaatttcaatgcattaaatactatataatttcctttttcatatccttaacca 9266884  T
Q  557 gtgcc 561  Q
    |||||    
T  9266885 gtgcc 9266889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 406 - 588
Target Start/End: Complemental strand, 18043348 - 18043158
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||  ||    |||||||||||| |||||||||||||| ||||||| ||||||    
T  18043348 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaagaaaactgtttttgacattattataaattaa 18043249  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccctttt 588  Q
    ||||||| |||||||| |||||||||||||||||||||||||| ||| | ||||||||||||| ||||  |||||| ||||||||||||||    
T  18043248 ttacacaatttcaatgcattaactactatataatttccttttttatacccttaaccagtgccccggaggcaccggttagcatttccctttt 18043158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 412 - 586
Target Start/End: Original strand, 42769996 - 42770178
Alignment:
Q  412 tgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacac 505  Q
    ||||||||||||||||  ||||| ||||| | ||||||||||||  ||    ||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  42769996 tgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgatattattataaattaattacac 42770095  T
Q  506 attttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctt 586  Q
    | |||||||| |||||||||||||||||||||||||||||| |||||||||||||||  |||  |||||| ||||||||||||    
T  42770096 aatttcaatgcattaactactatataatttcctttttcataccattaaccagtgccccgggggcaccggttagcatttccctt 42770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 407 - 567
Target Start/End: Complemental strand, 38163035 - 38162869
Alignment:
Q  407 ggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaat 500  Q
    |||| ||||||||||||||||  |||||  |||| | ||||||||||||||||    ||||||||||||||||||||||||||| ||||||| |||||||    
T  38163035 ggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaat 38162936  T
Q  501 tacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag 567  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||| | ||||||||||||| ||||    
T  38162935 tacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgccccggag 38162869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 459 - 585
Target Start/End: Complemental strand, 29210540 - 29210412
Alignment:
Q  459 taccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||    
T  29210540 taccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagt 29210441  T
Q  559 gcccgggag--accggtaagcatttccct 585  Q
    |||| ||||  |||||| |||||||||||    
T  29210440 gccccggaggcaccggttagcatttccct 29210412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 412 - 562
Target Start/End: Original strand, 12072068 - 12072224
Alignment:
Q  412 tgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacac 505  Q
    ||||||||||||||||  ||||| ||||| | |||||||||||| |||    |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  12072068 tgctaaccggtgcccccggggcactggttaagcataccataaaaaggaattattaccataaaagaaaactgtttttgactttattatcaattaattacac 12072167  T
Q  506 attttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    | |||||||| ||||||||||| |||||||||||||||||||| |||||| ||||||    
T  12072168 aatttcaatgcattaactactacataatttcctttttcatatccttaaccggtgccc 12072224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 406 - 560
Target Start/End: Complemental strand, 47010179 - 47010019
Alignment:
Q  406 gggtcatgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||||||||||||| ||  || ||||| | ||||||||||||| ||    |||||||||||||||||||||||||| |||||||| ||||||    
T  47010179 gggtcctgctaaccggtgcccctggagcactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttgaatttattataaattaa 47010080  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc 560  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||||| |||||||||||    
T  47010079 ttacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgc 47010019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 457 - 585
Target Start/End: Original strand, 19031872 - 19032002
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| |    
T  19031872 attaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgttttaactactatataatttcctttttcatatccttaacta 19031971  T
Q  557 gtg-cccgggag-accggtaagcatttccct 585  Q
     || ||| |||| |||||| |||||||||||    
T  19031972 atgcccccggagcaccggttagcatttccct 19032002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 403 - 562
Target Start/End: Original strand, 24178460 - 24178625
Alignment:
Q  403 tttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaat 496  Q
    ||||||||  |||||||||||||||  ||||| ||||| | |||||||||||| | |    ||||||||||||||||||| |||||||||||||||  ||    
T  24178460 tttgggtccggctaaccggtgcccccggggcactggttaagcataccataaaatgaaattattaccataaaaggaaactgcttttgactttattatagat 24178559  T
Q  497 taattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    |||||||||| |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||    
T  24178560 taattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccc 24178625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 457 - 585
Target Start/End: Complemental strand, 48071611 - 48071482
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||||||||||| |||||| |||||||    
T  48071611 attaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactattatataatttccttttacatatccttaacca 48071512  T
Q  557 gtgcccgggag-accggtaagcatttccct 585  Q
    || ||| |||| | |||| |||||||||||    
T  48071511 gtaccccggagcatcggttagcatttccct 48071482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 405 - 556
Target Start/End: Original strand, 30294380 - 30294537
Alignment:
Q  405 tgggtcatgctaaccggtg-ccccgg-gcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| |||||||||||| |||||| |||  |||| | ||||||||||||||||    ||||||||||| ||||||||||||||| ||||||| |||||    
T  30294380 tgggtcctgctaaccggtgtccccggagcacaggttaagcataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaatta 30294479  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  30294480 attacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 30294537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 457 - 560
Target Start/End: Original strand, 3784770 - 3784873
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||| ||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  3784770 attaccataaaagaaaattgtttttgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 3784869  T
Q  557 gtgc 560  Q
    ||||    
T  3784870 gtgc 3784873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 434 - 561
Target Start/End: Original strand, 36446355 - 36446485
Alignment:
Q  434 tggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactata 529  Q
    ||||| ||||||||||||||||||    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  36446355 tggttaaacataccataaaagggaattattactataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactata 36446454  T
Q  530 taatttcctttttcatatcattaaccagtgcc 561  Q
    ||||||||||||| ||||  ||||||||||||    
T  36446455 taatttccttttt-atattcttaaccagtgcc 36446485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 406 - 582
Target Start/End: Original strand, 38701937 - 38702117
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaagggattaccataaaaggaaactgtttttgactttattatgaattaattac 503  Q
    ||||| |||||||||||||||   ||||| ||||| | |||||||||| |   ||||||||||||| |||||||||||||| ||||||| ||||||||||    
T  38701937 gggtcctgctaaccggtgccctcggggcactggttaagcataccataagaattattaccataaaagaaaactgtttttgacattattataaattaattac 38702036  T
Q  504 acattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggag-accggtaagcatttc 582  Q
    | | |||||||| ||||||||||||||| |||||||||||||| | |||||||||| |||||||| |||||| ||||||||    
T  38702037 ataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccccgggagcaccggttagcatttc 38702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 457 - 557
Target Start/End: Complemental strand, 3097788 - 3097688
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  3097788 attaccataaaagaaaactgtttttgactttattataaattaattacataatttcaatgcattaactactatataatttcctttttcatatccttaacca 3097689  T
Q  557 g 557  Q
    |    
T  3097688 g 3097688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 457 - 559
Target Start/End: Original strand, 35985678 - 35985780
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||| ||    
T  35985678 attaccataaaaggaaactgtttttcactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaaca 35985777  T
Q  557 gtg 559  Q
    |||    
T  35985778 gtg 35985780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 457 - 587
Target Start/End: Complemental strand, 12307046 - 12306915
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||| ||||||| |||||||||| |    
T  12307046 attaccataaaaggaatctgtttttgactttattataaattaattacacaatttcaatgtattaactac-atataattttctttttcgtatcattaacta 12306948  T
Q  557 gtgcccgggag--accggtaagcatttcccttt 587  Q
    | ||||  |||  |||||| |||||||||||||    
T  12306947 gagccccagaggcaccggttagcatttcccttt 12306915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 457 - 585
Target Start/End: Complemental strand, 45431407 - 45431278
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||||||| |||| ||    
T  45431407 attaccataaaaggaaactatttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaatca 45431308  T
Q  557 gtgcccgggag-accggtaagcatttccct 585  Q
    |  || ||| | |||||| |||||||||||    
T  45431307 ggccctgggggcaccggttagcatttccct 45431278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 457 - 587
Target Start/End: Original strand, 51368842 - 51368974
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||| ||||||||||||| |||||||| ||||||| |||||| |||||| |||||||| |||||||||||||||||||||||||||||| | |||||||    
T  51368842 attactataaaaggaaactatttttgacattattataaattaactacacaatttcaatgcattaactactatataatttcctttttcatacccttaacca 51368941  T
Q  557 gtgcccgggag--accggtaagcatttcccttt 587  Q
    || ||| ||||  |||||| |||||||||||||    
T  51368942 gtaccctggaggtaccggttagcatttcccttt 51368974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 406 - 586
Target Start/End: Original strand, 14350279 - 14350465
Alignment:
Q  406 gggtcatgctaaccggtgcccc-gggcattggttgaacataccataaaagg---gattaccataaaaggaaactgtttttgactttattatgaattaatt 501  Q
    ||||| |||||||||||||||| ||||| ||||| | |||||||| || ||    ||||||||||||||||| |||||||||| ||||||| ||||||||    
T  14350279 gggtcctgctaaccggtgccccggggcactggttaagcataccattaagggaattattaccataaaaggaaattgtttttgacattattataaattaatt 14350378  T
Q  502 acacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc-ccgggag-accggtaagcatttccctt 586  Q
    ||||| ||| |||| ||||||||| |||||||||||||||||||| | |||||| |||| ||||| | |||||| ||||||||||||    
T  14350379 acacaattttaatgcattaactacaatataatttcctttttcatacccttaaccggtgctccgggggcaccggttagcatttccctt 14350465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 457 - 584
Target Start/End: Complemental strand, 38335298 - 38335170
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||| |||||||| |||||||||||||||||||||| ||||||||||||| || ||||| ||||| |||||||||||||||||||||||||| |||||||    
T  38335298 attatcataaaagaaaactgtttttgactttattataaattaattacacaattacaatgcattaattactatataatttcctttttcatatctttaacca 38335199  T
Q  557 gtg-cccgggagaccggtaagcatttccc 584  Q
    ||| |||  || |||||| ||||||||||    
T  38335198 gtgtcccaagacaccggttagcatttccc 38335170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 457 - 567
Target Start/End: Complemental strand, 6770466 - 6770356
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||||||| ||||  |    
T  6770466 attatcataaaatgaaactgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaatta 6770367  T
Q  557 gtgcccgggag 567  Q
    |||||| ||||    
T  6770366 gtgccccggag 6770356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 400 - 556
Target Start/End: Original strand, 45449238 - 45449400
Alignment:
Q  400 taatttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaagg----gattaccataaaaggaaactgtttttgactttattatg 493  Q
    ||||| ||||| ||||||||| ||||||  ||||| ||||| ||||||||||||||||     |||||||||||||||||||| |||||||||||||||     
T  45449238 taattagggtcctgctaaccgatgcccctggggcactggttaaacataccataaaaggcaattattaccataaaaggaaactgcttttgactttattata 45449337  T
Q  494 aattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    | ||||||||||  ||| |||| ||||||||||||||||||| |||||| ||||| |||||||    
T  45449338 atttaattacactattttaatgcattaactactatataattttcttttttatatctttaacca 45449400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 403 - 581
Target Start/End: Original strand, 48383108 - 48383294
Alignment:
Q  403 tttgggtcatgctaaccggtgccccgg--gcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaat 496  Q
    |||||||| |||||||| ||||||| |  ||||||||| | ||||||||||||||||    ||||||||||||||||||||||||||||||||||| |||    
T  48383108 tttgggtcctgctaaccagtgcccctgaggcattggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaat 48383207  T
Q  497 taattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggag-accggtaagcattt 581  Q
    ||||||||   |||||||  |||||||   ||||||||| |||||||| ||| |||||||||| |||||||| |||||| |||||||    
T  48383208 taattacattatttcaatacattaactttcatataattttctttttcacatccttaaccagtgccccgggagcaccggttagcattt 48383294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 471 - 589
Target Start/End: Complemental strand, 30657723 - 30657603
Alignment:
Q  471 aaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggag-a 568  Q
    |||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||||||| ||||||||||  ||||| |||| |||||||| |    
T  30657723 aaactgtttttgactttattataaattaattacataatttcaatgcattaactactatataatttcttttttcatatgcttaactagtgccccgggagca 30657624  T
Q  569 ccggtaagcatttccctttta 589  Q
    ||||| |||||||||||||||    
T  30657623 ccggttagcatttccctttta 30657603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 457 - 585
Target Start/End: Complemental strand, 13961340 - 13961211
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||  ||||| ||||| ||||||     
T  13961340 attaccataaaatgaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactactatataattt-tttttttatatccttaaccc 13961242  T
Q  557 gtgccc--gggagaccggtaagcatttccct 585  Q
    ||||||  |||  |||||| |||||||||||    
T  13961241 gtgccccgggggcaccggttagcatttccct 13961211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 47532667 - 47532824
Alignment:
Q  402 atttgggtcatgctaaccggtgcc--ccgggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaa 495  Q
    ||||||||| |||||||||||| |  | ||||||||||| | ||||||||||||||||    |||  ||||||||||| | |||||||||||||||| |     
T  47532667 atttgggtcttgctaaccggtgtcttcggggcattggttaagcataccataaaagggaattattattataaaaggaaattatttttgactttattatca- 47532765  T
Q  496 ttaattacacattttcaatgtattaactactatataatttcctttttcatatcattaac 554  Q
    ||||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||||    
T  47532766 ttaattacacaatttcaatgcattaactactatataattttctttttcatatccttaac 47532824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 457 - 586
Target Start/End: Complemental strand, 29683325 - 29683193
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcct-ttttcatatcattaacc 555  Q
    ||||| |||||| ||||||||||||||||||||||| ||||||||| ||  |||||||| |||||||||||||||||||||| |||| ||||| ||||||    
T  29683325 attactataaaatgaaactgtttttgactttattataaattaattatacgatttcaatgcattaactactatataatttcctttttttatatctttaacc 29683226  T
Q  556 agtgccc--gggagaccggtaagcatttccctt 586  Q
    |||||||  |||  |||||| ||||||||||||    
T  29683225 agtgccccgggggcaccggttagcatttccctt 29683193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 457 - 559
Target Start/End: Complemental strand, 43286851 - 43286749
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||||| | ||||||   |||||||| ||||||||||||||||||||||| |||||||    
T  43286851 attactataaaaggaaactatttttgactttattataaattaattacataatttcaaaacattaactattatataatttcctttttcatatccttaacca 43286752  T
Q  557 gtg 559  Q
    |||    
T  43286751 gtg 43286749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 463 - 556
Target Start/End: Original strand, 8472977 - 8473070
Alignment:
Q  463 ataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||| |||| |||||||| ||||||||||||||||| ||||| |||||||    
T  8472977 ataaaatgaaactgtttttgactttattataaattaattacacaattttaatgcattaactattatataatttccttttttatatccttaacca 8473070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 477 - 558
Target Start/End: Original strand, 15282591 - 15282672
Alignment:
Q  477 tttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  15282591 tttttgactttattataaattaattacacaatttcaatatattaactactatataattttctttttcatatccttaaccagt 15282672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 442 - 562
Target Start/End: Complemental strand, 41730456 - 41730329
Alignment:
Q  442 cataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtatta---actactatataatt 534  Q
    ||||||||||||||||    ||| ||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||   ||||||||||||||    
T  41730456 cataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattaaacaatttcaatgcattaattactactatataatt 41730357  T
Q  535 tcctttttcatatcattaaccagtgccc 562  Q
    || ||||||||||  |||||| ||||||    
T  41730356 tcttttttcatattcttaacccgtgccc 41730329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 50128229 - 50128325
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaa 553  Q
    |||||||||||| ||||||| |||| |||||||||| ||||||||||||| |||||||| |||||||||||| |||||| |||||||||||| ||||    
T  50128229 attaccataaaatgaaactgcttttaactttattataaattaattacacaatttcaatgcattaactactatgtaattttctttttcatatccttaa 50128325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 457 - 562
Target Start/End: Original strand, 23473521 - 23473626
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||||||||||| |||  |||||||||| ||||||||| ||| |||||||  ||||||| ||||||||| |||||||||||||| |||||||    
T  23473521 attaccataaaaggaaactgctttaaactttattataaattaattatacaatttcaatacattaactgctatataatctcctttttcatatccttaacca 23473620  T
Q  557 gtgccc 562  Q
     |||||    
T  23473621 atgccc 23473626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 477 - 593
Target Start/End: Original strand, 35700728 - 35700843
Alignment:
Q  477 tttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggagaccggtaag 576  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||||  |||| |||||||||  |||||| ||| || |     
T  35700728 tttttgacttt-ttataaattaattacacaatttcaatgtattaactactgtataatttcctttttagtatccttaaccagtatccgggacaccagttaa 35700826  T
Q  577 catttcccttttaattt 593  Q
    |||||||||| ||||||    
T  35700827 catttcccttataattt 35700843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 458 - 540
Target Start/End: Complemental strand, 37503341 - 37503260
Alignment:
Q  458 ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttt 540  Q
    |||||||||||||||| | ||||||| ||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  37503341 ttaccataaaaggaaaatatttttgatttt-ttataaattaattacacaatttcaatgtattaactactatataatttccttt 37503260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 457 - 542
Target Start/End: Original strand, 37315325 - 37315409
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 542  Q
    |||| |||||||| ||||||| ||||||||| |||| ||||||||||| | |||||||| ||||||||||||||||||||||||||    
T  37315325 attagcataaaagaaaactgtctttgacttt-ttataaattaattacataatttcaatgcattaactactatataatttccttttt 37315409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 457 - 564
Target Start/End: Complemental strand, 30217891 - 30217782
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc--tttttcatatcattaac 554  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||| | | ||| |||| |||||||||| | ||||| ||  ||||||||||| ||| |    
T  30217891 attaccataaaagaaaactatttttgactttattataaattaattaaataatttaaatgcattaactactctctaattccctttttttcatatccttagc 30217792  T
Q  555 cagtgcccgg 564  Q
    ||||||||||    
T  30217791 cagtgcccgg 30217782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 463 - 553
Target Start/End: Complemental strand, 39497430 - 39497340
Alignment:
Q  463 ataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaa 553  Q
    ||||||| ||| | |||||||||||||||| ||||||||| | | ||| |||| ||||||||||||||||||| |||||||||||| ||||    
T  39497430 ataaaagaaaattatttttgactttattataaattaattatataattttaatgcattaactactatataattttctttttcatatccttaa 39497340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 435 - 562
Target Start/End: Complemental strand, 52749757 - 52749626
Alignment:
Q  435 ggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatat 530  Q
    |||| |||||||||||||| |||    |||||||||||  ||| ||||||| |||||||| | |||| | || ||| |||||||  |||||||| |||||    
T  52749757 ggttaaacataccataaaaaggaattattaccataaaaaaaaattgtttttaactttattgtaaatttagtatacaatttcaatacattaactattatat 52749658  T
Q  531 aatttcctttttcatatcattaaccagtgccc 562  Q
    |||||||||||||||||| ||||||| |||||    
T  52749657 aatttcctttttcatatctttaaccaatgccc 52749626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 479 - 560
Target Start/End: Complemental strand, 26228300 - 26228219
Alignment:
Q  479 tttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc 560  Q
    ||||| |||||||| ||||||||||| | |||||||| |||||||||||||||||||| ||||| || || |||||||||||    
T  26228300 tttgattttattataaattaattacataatttcaatgcattaactactatataatttcattttttatctccttaaccagtgc 26228219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 512 - 583
Target Start/End: Original strand, 19011108 - 19011180
Alignment:
Q  512 aatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggagaccggtaagcatttcc 583  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||| ||||||| |||||| |||||||||    
T  19011108 aatgcattaactactatataatttcctttttcatatccttaacccgtgccccgggacaccggttagcatttcc 19011180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 408 - 535
Target Start/End: Complemental strand, 52431765 - 52431632
Alignment:
Q  408 gtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga-----ttaccataaaaggaaactgtttttgactttattatgaattaat 500  Q
    |||||||||||||||| |||  ||||| ||||| | ||||||| |||| |||     |||||||||||| ||| || ||||||| || |||| |||||||    
T  52431765 gtcatgctaaccggtgtccctggggcactggttaagcataccaaaaaaaggaaattattaccataaaagaaaattgcttttgacatt-ttataaattaat 52431667  T
Q  501 tacacattttcaatgtattaactactatataattt 535  Q
    |||||| |||||||| |||||||||||||||||||    
T  52431666 tacacaatttcaatgcattaactactatataattt 52431632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 14881036 - 14881124
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||             ||||| ||||||||||||||||||||||| |||||||    
T  14881036 attaccataaaaggaaactgtttttgactttattataaattaattataca-------------aactattatataatttcctttttcatatccttaacca 14881122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 484 - 562
Target Start/End: Original strand, 39912363 - 39912441
Alignment:
Q  484 ctttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    |||| |||| ||||||| ||||| |||||||| |||||||| |||||||||||| |||| ||||| |||| ||||||||    
T  39912363 cttttttataaattaatcacacaatttcaatgcattaactagtatataatttccctttttatatccttaatcagtgccc 39912441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 471 - 584
Target Start/End: Complemental strand, 28481954 - 28481844
Alignment:
Q  471 aaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag--a 568  Q
    ||||||||||| | |||||||| ||||||||||||| ||| |||| ||||    || ||||||||||||||||||||| |||||||| ||||  |||  |    
T  28481954 aaactgttttt-attttattataaattaattacacaattttaatgcatta----ctgtataatttcctttttcatatccttaaccagggcccaagaggca 28481860  T
Q  569 ccggtaagcatttccc 584  Q
    ||||| ||||||||||    
T  28481859 ccggttagcatttccc 28481844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 489 - 584
Target Start/End: Complemental strand, 39081898 - 39081803
Alignment:
Q  489 ttatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggagaccggtaagcatttccc 584  Q
    |||| ||||||||| | | |||||||  |||||||| ||||||||||| |||||  |||  ||||||||||||||| | |||||| ||||||||||    
T  39081898 ttataaattaattataaaatttcaatacattaactagtatataatttcatttttagtatgcttaaccagtgcccggaacaccggttagcatttccc 39081803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 489 - 559
Target Start/End: Original strand, 3838866 - 3838936
Alignment:
Q  489 ttatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 559  Q
    |||| ||||||||||||| ||| |||| |||||||| |||||||||||||||||  |||  ||||||||||    
T  3838866 ttataaattaattacacaattttaatgcattaactattatataatttcctttttagtatgcttaaccagtg 3838936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 428 - 491
Target Start/End: Original strand, 19010711 - 19010778
Alignment:
Q  428 gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttatta 491  Q
    ||||| ||||| | ||||||||||||||||    |||||||||||||||||| |||||||||||||||    
T  19010711 gggcactggttaatcataccataaaagggaattattaccataaaaggaaactatttttgactttatta 19010778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 561
Target Start/End: Original strand, 10976014 - 10976063
Alignment:
Q  512 aatgtattaactactatataatttcctttttcatatcattaaccagtgcc 561  Q
    |||| ||||||||||||||||| |||||||||||||| ||||| ||||||    
T  10976014 aatgcattaactactatataatctcctttttcatatccttaacaagtgcc 10976063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 401 - 446
Target Start/End: Original strand, 23789491 - 23789537
Alignment:
Q  401 aatttgggtcatgctaaccggtg-ccccgggcattggttgaacatac 446  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  23789491 aatttgggtcatgctaaccagtgcccccgggcattggttaaacatac 23789537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 586
Target Start/End: Original strand, 28725963 - 28726094
Alignment:
Q  458 ttaccataaaaggaaactgtttttgactttattatgaattaattacaca-ttttcaatgtattaactactatataatttcctttttca-tatcattaacc 555  Q
    |||||||||||||||  | || |||||||  ||||| |||||||| ||| ||||||||| | ||| ||  |||||||||||||||| | |||| ||||||    
T  28725963 ttaccataaaaggaagtt-ttgttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttccttttttattatccttaacc 28726061  T
Q  556 agtgccc--gggagaccggtaagcatttccctt 586  Q
    |||||||  |||  |||||| ||||||||||||    
T  28726062 agtgccccgggggcaccggttagcatttccctt 28726094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 561
Target Start/End: Complemental strand, 49867558 - 49867454
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa-tttcctttttcatatcattaacc 555  Q
    ||||| |||||| |||| | ||| ||||||| || | ||||||||||||| ||||||   ||||| |||||||||| |||| |||||  |||||||||||    
T  49867558 attactataaaatgaaattttttctgacttt-ttgtaaattaattacacaatttcaaaacattaattactatataactttcttttttagtatcattaacc 49867460  T
Q  556 agtgcc 561  Q
    ||||||    
T  49867459 agtgcc 49867454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 5e-49; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 405 - 587
Target Start/End: Complemental strand, 3515953 - 3515763
Alignment:
Q  405 tgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| ||||||||||||||||  |||||  |||| ||||||||||||||||||    ||||||||||||||||||||||||||| ||||||| |||||    
T  3515953 tgggtcctgctaaccggtgcccctggggcacaggttaaacataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaatta 3515854  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttcccttt 587  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||||  |||  |||||| |||||||||||||    
T  3515853 attacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccctgggggcaccggttagcatttcccttt 3515763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 406 - 562
Target Start/End: Original strand, 26467124 - 26467286
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    |||||||||||||||||||| |  ||||| |||||  |||||||||||||||||    |||||||||||||||||| |||||||||||||||| ||||||    
T  26467124 gggtcatgctaaccggtgcctccggggcactggttagacataccataaaagggaattattaccataaaaggaaactatttttgactttattataaattaa 26467223  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  26467224 ttacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtgccc 26467286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 406 - 584
Target Start/End: Complemental strand, 392282 - 392096
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||| ||    ||||||||||||||||||||||||||| ||||||| ||||||    
T  392282 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttgacattattataaattaa 392183  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 584  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||||  |||  |||||| ||||||||||    
T  392182 ttacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 392096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 406 - 587
Target Start/End: Original strand, 32929508 - 32929697
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||||||||||||||||||| ||||||    
T  32929508 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaa 32929607  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttcccttt 587  Q
    ||||||| |||||||| ||||| || ||||||||||||||||||||| | ||||||| |||||  |||  |||||| |||||||||||||    
T  32929608 ttacacaatttcaatgcattaattaatatataatttcctttttcatacccttaaccattgccccgggggcaccggttagcatttcccttt 32929697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 457 - 592
Target Start/End: Complemental strand, 12525848 - 12525711
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||| |||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  12525848 attaccataaaatgaaactgtgtttgacattattataaattaattacacattttcaatgtattaactactatataatttcctttttcatacccttaacca 12525749  T
Q  557 gtgcccgggag--accggtaagcatttcccttttaatt 592  Q
    || ||| ||||  |||||| ||||||||||||| ||||    
T  12525748 gtaccccggaggcaccggttagcatttccctttaaatt 12525711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 459 - 586
Target Start/End: Complemental strand, 20898075 - 20897946
Alignment:
Q  459 taccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  20898075 taccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 20897976  T
Q  559 gccc--gggagaccggtaagcatttccctt 586  Q
    ||||  |||  |||||| ||||||||||||    
T  20897975 gccctgggggcaccggttagcatttccctt 20897946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 459 - 565
Target Start/End: Original strand, 34477609 - 34477715
Alignment:
Q  459 taccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  34477609 taccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 34477708  T
Q  559 gcccggg 565  Q
    |||||||    
T  34477709 gcccggg 34477715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 457 - 562
Target Start/End: Original strand, 18276672 - 18276777
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  18276672 attaccataaaaggaaactgtttttgactttattataaattaattacacaaattcaatgcattaactactatataatttcctttttcatatccttaacca 18276771  T
Q  557 gtgccc 562  Q
    ||||||    
T  18276772 gtgccc 18276777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 406 - 586
Target Start/End: Complemental strand, 23402324 - 23402136
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||||||||||| |  |||||  |||| | |||||||||||||| |    ||||||||||||||||||||||||||||||||||| ||||||    
T  23402324 gggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaaggtaattattaccataaaaggaaactgtttttgactttattataaattaa 23402225  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccctt 586  Q
    || |||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||| ||||  ||| || ||||||||||||    
T  23402224 tttcacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgccccggaggcaccagttagcatttccctt 23402136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 412 - 562
Target Start/End: Original strand, 32985199 - 32985355
Alignment:
Q  412 tgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacac 505  Q
    ||||||||||||||||  ||||| ||||| | ||||||||||||||||    ||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  32985199 tgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattacac 32985298  T
Q  506 attttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    | |||||||  |||||||||||||||||||||||||| ||||| ||||||| |||||    
T  32985299 aatttcaatacattaactactatataatttccttttttatatccttaaccaatgccc 32985355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 403 - 559
Target Start/End: Complemental strand, 35044077 - 35043917
Alignment:
Q  403 tttgggtcatgctaaccggtgccccggg-cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatt 497  Q
    ||||||||||| |||||||||||||||| || ||||| | ||||||||||||| ||    |||||||||||| |||||||||||||||||||||| ||||    
T  35044077 tttgggtcatgttaaccggtgccccggggcactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaatt 35043978  T
Q  498 aattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 559  Q
    ||| ||||| |||||||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  35043977 aat-acacaatttcaatgaattaactactatataatttcttttttcatatccttaaccagtg 35043917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 457 - 582
Target Start/End: Complemental strand, 2350781 - 2350654
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||||||| |||||||    
T  2350781 attaccataaaaggaaactatttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctttttcatatccttaacca 2350682  T
Q  557 gtg-cccgggag-accggtaagcatttc 582  Q
    ||| |||||||| |||||| ||||||||    
T  2350681 gtgccccgggagcaccggttagcatttc 2350654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 403 - 586
Target Start/End: Original strand, 1391175 - 1391365
Alignment:
Q  403 tttgggtcatgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaat 496  Q
    |||||||| ||||||||||||  || ||  || ||||| | ||||||||||||||||    ||| |||||||| |||||||||||||||||||||| |||    
T  1391175 tttgggtcctgctaaccggtgttcctggaacactggttaagcataccataaaagggaattattatcataaaagaaaactgtttttgactttattataaat 1391274  T
Q  497 taattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag-accggtaagcatttccctt 586  Q
    |||||| ||| |||||||| |||||||||||||||||||||||||||||||| |||| |||| ||| |||| |||||| ||||||||||||    
T  1391275 taattatacaatttcaatgcattaactactatataatttcctttttcatatccttaatcagtaccccggagcaccggttagcatttccctt 1391365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 406 - 558
Target Start/End: Complemental strand, 2581138 - 2580980
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||| ||  ||| ||||||| | ||||||||||||||||    |||||||||||||||| | |||||||||||||||| ||||||    
T  2581138 gggtcctgctaaccggtgctcccggggtattggttaagcataccataaaagggaattattaccataaaaggaaattatttttgactttattataaattaa 2581039  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    ||||| | |||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  2581038 ttacataatttcaatgcattaactactatataatttccttttttatatcattaaccagt 2580980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 442 - 586
Target Start/End: Original strand, 7851197 - 7851347
Alignment:
Q  442 cataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc 537  Q
    ||||||||||||||||    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||| ||||| ||||||||||||| |    
T  7851197 cataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaattttaatgcattaattactatataattttc 7851296  T
Q  538 tttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctt 586  Q
    ||||||||||| |||||||||||||  |||  |||||| ||||||||||||    
T  7851297 tttttcatatccttaaccagtgccctgggggcaccggttagcatttccctt 7851347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 457 - 584
Target Start/End: Original strand, 21878404 - 21878533
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||| | | |||||||| |||||||||||||||||||||||||||||||| ||||||     
T  21878404 attaccataaaaagaaactgtttttgactttattataaattaattaaataatttcaatgcattaactactatataatttcctttttcatatccttaaccc 21878503  T
Q  557 gtgcccgggag--accggtaagcatttccc 584  Q
    |||||||||||  |||||| ||||||||||    
T  21878504 gtgcccgggaggcaccggttagcatttccc 21878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 405 - 560
Target Start/End: Original strand, 12145116 - 12145277
Alignment:
Q  405 tgggtcatgctaaccggtgcc-ccgg-gcattggttgaacataccataaaagg----gattaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| |||||||||||||| |||| ||| ||||| | ||||| ||||||||     |||| ||||||||||||||||||||||||||||||| |||||    
T  12145116 tgggtcctgctaaccggtgcctccggagcactggttaagcatactataaaaggaaattattatcataaaaggaaactgtttttgactttattataaatta 12145215  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc 560  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||||    
T  12145216 attacacaatttcaatgcattaactactatataatttcctttttcatatccttaacaagtgc 12145277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 406 - 585
Target Start/End: Complemental strand, 27433678 - 27433491
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||| |  |||| ||||||||||||||||||    |||||||||||||||||| |||||||| |||| || ||||||    
T  27433678 gggtcttgctaaccggtgcccccggggaacgggttaaacataccataaaagggaattattaccataaaaggaaactatttttgacattatgataaattaa 27433579  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccct 585  Q
    ||||||| ||| |||| |||||||||||||||||||||||||||||| | |||||||||||||  |||  |||||| |||||||||||    
T  27433578 ttacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 27433491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 406 - 562
Target Start/End: Complemental strand, 4215881 - 4215719
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||| ||||||  ||||| ||||| | |||||||||||||| |    ||||||||||||||||||||||||||| ||||||| ||||||    
T  4215881 gggtcctgctaaccgatgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaa 4215782  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    ||||||| |||||||| |||||||| |||||||||||||||||||||   |||||||||||||    
T  4215781 ttacacaatttcaatgcattaactattatataatttcctttttcatactcttaaccagtgccc 4215719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 442 - 564
Target Start/End: Original strand, 29451153 - 29451279
Alignment:
Q  442 cataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc 537  Q
    ||||||||||||||||    ||| |||||||||||||||| |||||||||||||| | ||||||||||| |||||||| |||||||||||||||||||||    
T  29451153 cataccataaaagggaattattatcataaaaggaaactgtgtttgactttattataatttaattacacaatttcaatgcattaactactatataatttcc 29451252  T
Q  538 tttttcatatcattaaccagtgcccgg 564  Q
    ||||||||||| |||||| ||||||||    
T  29451253 tttttcatatccttaaccggtgcccgg 29451279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 414 - 561
Target Start/End: Original strand, 11115106 - 11115256
Alignment:
Q  414 ctaaccggtgccccggg-cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacatt 508  Q
    |||||||||| |||||| || ||||| |||||| |||||||||||    |||||||||||| ||||| |||||||  ||||||| ||||||||||||| |    
T  11115106 ctaaccggtgtcccggggcactggttaaacatatcataaaagggaattattaccataaaagaaaactatttttga--ttattataaattaattacacaat 11115203  T
Q  509 ttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcc 561  Q
    |||||||||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  11115204 ttcaatgtattaactattatataatttccttttttatatccttaaccagtgcc 11115256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 406 - 556
Target Start/End: Original strand, 25165413 - 25165569
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||| ||  ||||||||||| | |||| | |||||| ||    ||| |||||||| |||||||||||||||||||||| ||||||    
T  25165413 gggtcctgctaaccggtgctcccagggcattggttaagcatatcgtaaaagagaattattatcataaaagaaaactgtttttgactttattataaattaa 25165512  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||||||| |||||||    
T  25165513 ttacacaatttcaatatattaactactatataatttcttttttcatatccttaacca 25165569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 469 - 586
Target Start/End: Original strand, 34396596 - 34396715
Alignment:
Q  469 ggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--ggga 566  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| ||| ||  |||     
T  34396596 ggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacctgtgtcctggggg 34396695  T
Q  567 gaccggtaagcatttccctt 586  Q
     |||||| ||||||||||||    
T  34396696 caccggttagcatttccctt 34396715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 457 - 587
Target Start/End: Original strand, 3026066 - 3026196
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||| ||||||| |||||||||||||| ||||||| ||||||||| ||| |||||||| |||||||||| ||||||||| ||||||||| | |||||||    
T  3026066 attacgataaaagaaaactgtttttgacattattataaattaattatacaatttcaatgcattaactactgtataatttcatttttcatacccttaacca 3026165  T
Q  557 gtgcccgggagaccggtaagcatttcccttt 587  Q
    |||||||||  ||| || |||||||||||||    
T  3026166 gtgcccggggcaccagttagcatttcccttt 3026196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 405 - 585
Target Start/End: Complemental strand, 31280502 - 31280320
Alignment:
Q  405 tgggtcatgctaaccggtgcc-ccgggcattggttgaacataccataaaagggattaccataaaaggaaactgtttttgactttattatgaattaattac 503  Q
    |||||| |||||||||||||| ||||||| | ||| | ||||||||| ||   ||||| |||||||||||| ||||||||| ||||||| |||||||||     
T  31280502 tgggtcctgctaaccggtgcctccgggcactcgttaagcataccatagaatt-attactataaaaggaaaccgtttttgacattattataaattaattat 31280404  T
Q  504 acattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcc-cgggag-accggtaagcatttccct 585  Q
    ||| |||||||| |||||||||||||||||||||||||||||    |||| ||||||| |||||| |||||| |||||||||||    
T  31280403 acaatttcaatgcattaactactatataatttcctttttcattctcttaatcagtgcctcgggagcaccggttagcatttccct 31280320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 34851906 - 34852003
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaac 554  Q
    ||||| ||||||||||| | |||||||||||||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||    
T  34851906 attactataaaaggaaattatttttgactttattataaatcaattacacaatttcaatgcattaactactatataatttcctttttcatatctttaac 34852003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 462 - 562
Target Start/End: Original strand, 23629638 - 23629738
Alignment:
Q  462 cataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcc 561  Q
    |||||||||||| |||||||||||||||||| || |||||||||| |||||||  ||||||||||||||||||| |||||||||||| |||| |||||||    
T  23629638 cataaaaggaaattgtttttgactttattataaagtaattacacaatttcaatacattaactactatataattttctttttcatatccttaatcagtgcc 23629737  T
Q  562 c 562  Q
    |    
T  23629738 c 23629738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 457 - 562
Target Start/End: Original strand, 13417016 - 13417124
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatga---attaattacacattttcaatgtattaactactatataatttcctttttcatatcattaa 553  Q
    ||||||||||||| |||||||||||||||||||||| |   |||||||||||| |||||||  |||||||| ||||||||||||||||||||||| ||||    
T  13417016 attaccataaaagaaaactgtttttgactttattattataaattaattacacaatttcaatacattaactaatatataatttcctttttcatatccttaa 13417115  T
Q  554 ccagtgccc 562  Q
    | |||||||    
T  13417116 ctagtgccc 13417124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 428 - 565
Target Start/End: Original strand, 1840271 - 1840412
Alignment:
Q  428 gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 523  Q
    ||||| ||||| |||||| |||||||||||    ||||||| |||||||||||||||| |||||||||| ||||||||||||| ||| |||  ||||| |    
T  1840271 gggcactggttaaacatatcataaaagggaattattaccatgaaaggaaactgtttttaactttattataaattaattacacaattttaatacattaatt 1840370  T
Q  524 actatataatttcctttttcatatcattaaccagtgcccggg 565  Q
    | ||||||||||| ||||| ||||| ||||||||||| ||||    
T  1840371 attatataatttctttttttatatccttaaccagtgctcggg 1840412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 457 - 544
Target Start/End: Complemental strand, 961138 - 961051
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttca 544  Q
    |||| |||||||||||| ||||| |||||||||||| ||||||||||||| ||| |||| ||||||||||||||||||||||||||||    
T  961138 attatcataaaaggaaattgtttctgactttattatcaattaattacacaattttaatgcattaactactatataatttcctttttca 961051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 443 - 555
Target Start/End: Complemental strand, 28225367 - 28225252
Alignment:
Q  443 ataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcct 538  Q
    |||||||||||||||    |||||||||||| ||| |||||||||||||||||| ||||||||||||| |||||||  ||||| |||||||||| |||||    
T  28225367 ataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaattactatataa-ttcct 28225269  T
Q  539 ttttcatatcattaacc 555  Q
    |||||||||| ||||||    
T  28225268 ttttcatatccttaacc 28225252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 442 - 560
Target Start/End: Complemental strand, 5323548 - 5323426
Alignment:
Q  442 cataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc 537  Q
    ||||||||||||||||    |||||||||||||||| |||||||||||||||||| ||||||||||| | ||| ||||  |||| |||||||||||||||    
T  5323548 cataccataaaagggaattattaccataaaaggaaattgtttttgactttattataaattaattacataattttaatgctttaattactatataatttcc 5323449  T
Q  538 tttttcatatcattaaccagtgc 560  Q
    ||||| ||||  |||| ||||||    
T  5323448 ttttttatattcttaatcagtgc 5323426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 457 - 584
Target Start/End: Complemental strand, 29978361 - 29978233
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||  |||||||||||||||||||||| |||  |||||| | |||||||  ||||| |||||||||||||||||||||||||| ||||| |    
T  29978361 attaccataaaattaaactgtttttgactttattataaatatattacataatttcaatacattaaatactatataatttcctttttcatatccttaacta 29978262  T
Q  557 gtgcccgg-gagaccggtaagcatttccc 584  Q
    ||| |||| |  |||||| ||||||||||    
T  29978261 gtgtccggaggcaccggttagcatttccc 29978233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 487 - 562
Target Start/End: Complemental strand, 13529554 - 13529479
Alignment:
Q  487 tattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||| |||||||||||||    
T  13529554 tattataaattaattacacaatttcaatgcattaactactatataatttcctttttcacatccttaaccagtgccc 13529479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 9661115 - 9661018
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaac 554  Q
    |||||||||||||||||||| |||| |||||||| | ||||||||| ||| |||||||| |||||||| ||| ||||||| ||||||||||| |||||    
T  9661115 attaccataaaaggaaactgcttttaactttattttaaattaattatacaatttcaatgcattaactattatgtaatttcttttttcatatccttaac 9661018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 495 - 542
Target Start/End: Complemental strand, 10431827 - 10431780
Alignment:
Q  495 attaattacacattttcaatgtattaactactatataatttccttttt 542  Q
    |||||||||||| |||||||||| |||||| ||||||||||| |||||    
T  10431827 attaattacacaatttcaatgtaataactattatataatttctttttt 10431780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 11634028 - 11633970
Alignment:
Q  477 tttttgactttattatgaattaattacaca-ttttcaatgtattaactactatataatt 534  Q
    |||||||| || ||||| |||||||||||| ||||||||| | ||||||||||||||||    
T  11634028 tttttgacatttttatgtattaattacacaattttcaatgcaataactactatataatt 11633970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 5e-49; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 406 - 584
Target Start/End: Complemental strand, 20553117 - 20552931
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||||||||||||||||||| ||||||    
T  20553117 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 20553018  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg--cccgggagaccggtaagcatttccc 584  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||  ||||||  |||||| ||||||||||    
T  20553017 ttacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 20552931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 406 - 584
Target Start/End: Complemental strand, 31438832 - 31438646
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||||||||| |||  ||||| ||||| | ||||||||||||||||    ||| ||||||||||||||||||||||||||||||| ||||||    
T  31438832 gggtcctgctaaccggtgtccccggggcactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaa 31438733  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggag-accggtaagcatttccc 584  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||||||| |||||||||| |||||||| |||||| ||||||||||    
T  31438732 ttacacaatttcaatgcattaactactgtataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttccc 31438646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 404 - 562
Target Start/End: Complemental strand, 30486398 - 30486234
Alignment:
Q  404 ttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatt 497  Q
    ||||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    |||||||||||||||||||||||||||||||||||   ||    
T  30486398 ttgggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatagttt 30486299  T
Q  498 aattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||| |||||||||||||    
T  30486298 aattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgccc 30486234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 406 - 584
Target Start/End: Complemental strand, 44588088 - 44587902
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||| ||||  ||||| | ||| | ||||||||||||||||    |||||||||||||||||||||||| |||||||||| ||||||    
T  44588088 gggtcctgctaaccggtacccccggggcacttgttaagcataccataaaagggaattattaccataaaaggaaactgttttttactttattataaattaa 44587989  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 584  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||  |||  |||||| ||||||||||    
T  44587988 ttacacaatttcaatgtattaactactatataatttccttttttatatccttaaccggtgccccgggggcaccggttagcatttccc 44587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 404 - 585
Target Start/End: Original strand, 32360867 - 32361056
Alignment:
Q  404 ttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatt 497  Q
    ||||||| ||||||||||||||||  ||||||||||| | ||||||||||||||||    ||||||||||||||||||||||||||||||||||| ||||    
T  32360867 ttgggtcctgctaaccggtgcccccggggcattggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaatt 32360966  T
Q  498 aattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccct 585  Q
    ||||| |   |||||||| |||||||| |||||||||| |||||||| ||| |||||||||||||  |||  |||||| |||||||||||    
T  32360967 aattatattatttcaatgcattaactattatataattttctttttcacatccttaaccagtgccccgggggcaccggttagcatttccct 32361056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 406 - 586
Target Start/End: Original strand, 34442533 - 34442719
Alignment:
Q  406 gggtcatgctaaccggtgcccc-gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaat 500  Q
    ||||| ||||||||| |||||| ||||| ||||| | ||||||||||||||||    |||||||||||| |||||||||||||||||||||| |||||||    
T  34442533 gggtcctgctaaccgatgcccccgggcactggttaagcataccataaaagggaattattaccataaaagaaaactgtttttgactttattataaattaat 34442632  T
Q  501 tacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggagaccggtaagcatttccctt 586  Q
    |||||| |||||||| ||||||||||||||||| | |||||||||||| |||||  ||| ||||||  |||||| ||||||||||||    
T  34442633 tacacaatttcaatgcattaactactatataatcttctttttcatatccttaacatgtgccccggggcaccggttagcatttccctt 34442719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 463 - 588
Target Start/End: Original strand, 561581 - 561708
Alignment:
Q  463 ataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  561581 ataaaaggaaactgattttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 561680  T
Q  563 --gggagaccggtaagcatttccctttt 588  Q
      |||  |||||| ||||||||||||||    
T  561681 cgggggcaccggttagcatttccctttt 561708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 414 - 586
Target Start/End: Original strand, 38590883 - 38591062
Alignment:
Q  414 ctaaccggtgccccgggc-attggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacatt 508  Q
    |||||||||||| ||||  ||||||| | ||||||||||||||||    |||||||||||| |||||||||||||||||||||| ||||||||||||| |    
T  38590883 ctaaccggtgcctcggggtattggttaagcataccataaaagggaattattaccataaaagaaaactgtttttgactttattatcaattaattacacaat 38590982  T
Q  509 ttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctt 586  Q
    || |||  |||||||||| ||||||||||||||||||||  |||||||||||||  |||| |||||| ||||||||||||    
T  38590983 tttaatacattaactactgtataatttcctttttcatattcttaaccagtgccccagggacaccggttagcatttccctt 38591062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 406 - 581
Target Start/End: Original strand, 3668113 - 3668295
Alignment:
Q  406 gggtcatgctaaccggtgcc--ccgggcattggttgaacataccataaaagg----gattaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||  | ||||| ||||| ||||||| ||||||||     |||||||||||||||||||||||||||| ||||||| ||||||    
T  3668113 gggtcttgctaaccggtgccctcggggcactggttaaacatactataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaa 3668212  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag-accggtaagcattt 581  Q
    ||||||| |||||||| ||||||||||||||||||||||||| |||| | |||||||||| ||||| | |||||| |||||||    
T  3668213 ttacacaatttcaatgcattaactactatataatttccttttccatacccttaaccagtgtccgggggcaccggttagcattt 3668295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 406 - 562
Target Start/End: Original strand, 22068320 - 22068481
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||| |||||||||  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||||||||||||||||||| ||||||    
T  22068320 gggtcctgctaatcggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 22068419  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    ||| ||| |||||||| | |||||||||||||||| ||||||||||||| |||||||||||||    
T  22068420 ttatacaatttcaatgca-taactactatataattccctttttcatatccttaaccagtgccc 22068481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 442 - 586
Target Start/End: Complemental strand, 31390160 - 31390010
Alignment:
Q  442 cataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc 537  Q
    ||||||||||||||||    ||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||  |||||||||||||||||||||    
T  31390160 cataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacataatttcaatacattaactactatataatttcc 31390061  T
Q  538 tttttcatatcattaaccagtgcccgggag--accggtaagcatttccctt 586  Q
    ||||||||||| ||||| ||||||| ||||  ||| || ||||||||||||    
T  31390060 tttttcatatccttaactagtgccccggaggcaccagttagcatttccctt 31390010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 405 - 585
Target Start/End: Complemental strand, 22887937 - 22887749
Alignment:
Q  405 tgggtcatgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    ||||||||||||| ||||||||| ||  || ||||| | ||||||||||||| ||    |||||||||||||||||||||||| |||||||||| |||||    
T  22887937 tgggtcatgctaatcggtgcccccggagcactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttaactttattataaatta 22887838  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccct 585  Q
    |||||| | |||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||| ||||  | |||| |||||||||||    
T  22887837 attacataatttcaatgcattaactactatataatttcttttttcatatccttaaccactgccccggaggcatcggttagcatttccct 22887749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 457 - 562
Target Start/End: Complemental strand, 38296306 - 38296201
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||| |||||||    
T  38296306 attaccataaaaagaaactgtttttgactttattataaattaattacacaatttcaatgtattaattactatataattttctttttcatatctttaacca 38296207  T
Q  557 gtgccc 562  Q
    ||||||    
T  38296206 gtgccc 38296201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 406 - 560
Target Start/End: Complemental strand, 4381981 - 4381821
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||||| |||| ||  ||||| ||||| | |||||||||||| |||    ||||||||||||||||||||||||||| ||||||| ||||||    
T  4381981 gggtcctgctaaccagtgctcccggggcactggttaagcataccataaaatggaattattaccataaaaggaaactgtttttgacattattataaattaa 4381882  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc 560  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||    
T  4381881 ttacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgc 4381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 457 - 584
Target Start/End: Original strand, 8969464 - 8969591
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||  |||||||| ||||||||||||||||||| |||||||||||| ||||| |    
T  8969464 attaccataaaaggaaactgcttttgactttattataaattaattacactatttcaatgcattaactactatataattttctttttcatatccttaacta 8969563  T
Q  557 gtgcccgggagaccggtaagcatttccc 584  Q
    |||||||||  || ||| ||||||||||    
T  8969564 gtgcccggggcactggttagcatttccc 8969591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 26387064 - 26387218
Alignment:
Q  406 gggtcatgctaaccggtgccccg--ggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| || |||||||||||||   |||| ||||| | ||||||||||||||||    |||||||||||| ||| |||||||||||||||||| ||||||    
T  26387064 gggtcctgttaaccggtgcccccaaggcactggttaagcataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaa 26387163  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaac 554  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||    
T  26387164 ttacacaatttcaatgcattaactactatataatttcctttttcatatccttaac 26387218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 406 - 562
Target Start/End: Original strand, 27856396 - 27856558
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||| ||||||  ||||| ||||| | |||||||||||||| |    ||||||||||||||||||||||||||| ||||||| ||||||    
T  27856396 gggtcctgctaaccgatgcccccggggcactggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaa 27856495  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    ||||||| |||||||| |||||||| |||||||||||||||||||||   |||||||||||||    
T  27856496 ttacacaatttcaatgcattaactattatataatttcctttttcatactcttaaccagtgccc 27856558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 428 - 562
Target Start/End: Complemental strand, 6580351 - 6580213
Alignment:
Q  428 gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 523  Q
    ||||| ||||| | ||||||||||||||||    ||||||||||||||||||||||||||| ||||||| ||||||||||| | |||||||| |||||||    
T  6580351 gggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacataatttcaatgcattaact 6580252  T
Q  524 actatataatttcctttttcatatcattaaccagtgccc 562  Q
    |||||||| |||||||||||||| | |||||||||||||    
T  6580251 actatatagtttcctttttcatacccttaaccagtgccc 6580213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 412 - 584
Target Start/End: Complemental strand, 43637343 - 43637165
Alignment:
Q  412 tgctaaccggtgccccgg-gcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacaca 506  Q
    |||||||||||||||||| |||  |||| |||||||  ||||||| |    ||||||||||| |||| |||||||||||||||||| |||||||||||||    
T  43637343 tgctaaccggtgccccggagcacgggttaaacatactgtaaaaggaaattattaccataaaaagaaattgtttttgactttattataaattaattacaca 43637244  T
Q  507 ttttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggagaccggtaagcatttccc 584  Q
     |||||||| ||||||||||||||||||||||| |||||||| |||||||||| | ||||  |||||| ||||||||||    
T  43637243 atttcaatgcattaactactatataatttccttattcatatccttaaccagtgtctcggggcaccggttagcatttccc 43637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 398 - 587
Target Start/End: Complemental strand, 2898265 - 2898069
Alignment:
Q  398 tttaatttgggtcatgctaaccggtgcc-ccggg-cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttatta 491  Q
    |||||||  |||| |||||||||||||| ||||| || || || ||||||||||||||| ||    |||  ||| ||| |||||||||||||||||||||    
T  2898265 tttaattatggtcctgctaaccggtgcctccgggacactgattaaacataccataaaagagaattattatgatagaagaaaactgtttttgactttatta 2898166  T
Q  492 tgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggagaccggtaagcatttcccttt 587  Q
    | ||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| ||||||||||  |||||| |||||| | |||||||||||    
T  2898165 taaattaattacacaatttcaatgcattaactactatataattttctttttcatatccttaaccagtgttccgggacaccggttaacatttcccttt 2898069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 459 - 585
Target Start/End: Original strand, 26891722 - 26891850
Alignment:
Q  459 taccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||| |||| ||||    
T  26891722 taccataaaaggaaactatttttgactttattataaattaattacacaatttcaatgcattaactaatatataatttccttttttatatccttaatcagt 26891821  T
Q  559 g-cccgggag-accggtaagcatttccct 585  Q
    | |||||| | |||||| |||||||||||    
T  26891822 gtcccgggggcaccggttagcatttccct 26891850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 462 - 562
Target Start/End: Complemental strand, 32860226 - 32860126
Alignment:
Q  462 cataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcc 561  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||| ||||| |||||| |||||    
T  32860226 cataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaaatactatataatttccttttttatatccttaacccgtgcc 32860127  T
Q  562 c 562  Q
    |    
T  32860126 c 32860126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 406 - 562
Target Start/End: Original strand, 35851750 - 35851913
Alignment:
Q  406 gggtcatgctaaccggtgccccg---ggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    ||||| ||||||||||||||||    |||||||||| | ||||||||||||| ||    ||||||||||| ||||||||||||||||||||||| |||||    
T  35851750 gggtcctgctaaccggtgccccccgaggcattggttaagcataccataaaagagaattattaccataaaatgaaactgtttttgactttattatcaatta 35851849  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    ||||||   |||||||| |||||||| ||||||||||||||||||| ||| |||||| ||||||    
T  35851850 attacattatttcaatgcattaactattatataatttcctttttcacatccttaaccggtgccc 35851913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 406 - 584
Target Start/End: Original strand, 5093540 - 5093724
Alignment:
Q  406 gggtcatgctaaccggtgcccc-gggcattggttgaacataccataaaagg----gattaccataaaaggaaactgtttttgactttattatgaattaat 500  Q
    ||||| || ||||||||||||| ||||| | ||| ||||||||||||||||     |||| |||||||||||| || ||||||||||||||| |||||||    
T  5093540 gggtcctgttaaccggtgccccggggcactagttaaacataccataaaaggaaattattatcataaaaggaaattgcttttgactttattataaattaat 5093639  T
Q  501 tacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc-ccgggagaccggtaagcatttccc 584  Q
    |||||| ||| |||| |||||||||||| ||||||||||||||||||| ||||| ||||| ||| || ||| || ||||||||||    
T  5093640 tacacaattttaatgcattaactactatttaatttcctttttcatatccttaactagtgctccgagaaaccagttagcatttccc 5093724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 406 - 559
Target Start/End: Complemental strand, 22567788 - 22567629
Alignment:
Q  406 gggtcatgctaaccggtgccccggg--cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||||||||||||| ||  ||  |||| | ||||||||||||| ||    |||||||||||||||| | |||||||||||||||| ||||||    
T  22567788 gggtcctgctaaccggtgcccctggagcacgggttaagcataccataaaagagaattattaccataaaaggaaattatttttgactttattataaattaa 22567689  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 559  Q
    ||||||| |||||||  |||||||||||||||||||| ||||||||||| ||||||||||    
T  22567688 ttacacaatttcaatacattaactactatataatttcttttttcatatccttaaccagtg 22567629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 457 - 581
Target Start/End: Complemental strand, 5881350 - 5881221
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttca----atgtattaactactatataatttcctttttcatatcatta 552  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||||||| |||||    ||| |||||||||||||||||||||||||||||||| |||    
T  5881350 attatcataaaaggaaactctttttgactttattatcaattaattacacaatttcaatgcatgcattaactactatataatttcctttttcatatcctta 5881251  T
Q  553 accagtgc-ccgggagaccggtaagcattt 581  Q
    ||| |||| |||||| |||||| |||||||    
T  5881250 acctgtgctccgggacaccggttagcattt 5881221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 408 - 556
Target Start/End: Complemental strand, 1859346 - 1859192
Alignment:
Q  408 gtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaatt 501  Q
    ||||||||||||||||  ||  ||||| ||||| | ||||||||||||| ||    |||||||||||| |||||||||||||||||||||| ||||||||    
T  1859346 gtcatgctaaccggtgttcctagggcactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaatt 1859247  T
Q  502 acacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||| | |||||||| ||||||||||||| |||||| ||||| ||||| |||||||    
T  1859246 acataatttcaatgcattaactactatacaatttctttttttatatccttaacca 1859192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 457 - 555
Target Start/End: Complemental strand, 27584867 - 27584769
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacc 555  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||||  |||||||||||||||||||| |||||||||| ||||||    
T  27584867 attaccataaaaggaaactgcttttgattttattataaattaattacacaatttcaatgctttaactactatataatttcccttttcatatccttaacc 27584769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 442 - 560
Target Start/End: Original strand, 11021260 - 11021382
Alignment:
Q  442 cataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc 537  Q
    ||||||||||||||||    |||||| ||||| ||||||||||||||||||||||  |||||||||||| |||||||| ||||||||| ||||||||||     
T  11021260 cataccataaaagggaattattaccacaaaagaaaactgtttttgactttattatatattaattacacaatttcaatgcattaactaccatataatttct 11021359  T
Q  538 tttttcatatcattaaccagtgc 560  Q
    ||||||||||| |||| ||||||    
T  11021360 tttttcatatctttaatcagtgc 11021382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 457 - 587
Target Start/End: Original strand, 29102340 - 29102471
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||| | | |||||||||||||||  ||||||||||| |||||| ||||  |||||||    
T  29102340 attactataaaagaaaactgtttttgactttattataaattaattataaaatttcaatgtattaaccgctatataattttctttttgatattcttaacca 29102439  T
Q  557 gtg-cccgggagaccggtaagcatttcccttt 587  Q
     || ||||||| |||||| |||||||||||||    
T  29102440 atgtcccgggataccggtcagcatttcccttt 29102471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 406 - 562
Target Start/End: Complemental strand, 28601152 - 28600991
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||| ||  | ||| ||||| | ||||||||||||| ||    ||||||||||| |||||||||||| |||||||||| ||||||    
T  28601152 gggtcctgctaaccggtgctcccagtgcactggttaagcataccataaaagagaattattaccataaaaagaaactgtttttaactttattatcaattaa 28601053  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    ||| ||| |||||||| | |||||||| ||||||| ||||||||||||| |||||||||||||    
T  28601052 ttatacaatttcaatgca-taactactttataattccctttttcatatccttaaccagtgccc 28600991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 13574086 - 13574187
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||  ||||| |  |||||| |||||||||||||||| |||||||    
T  13574086 attaccataaaaagaaactgtttttgactttattataaattaattacacaatttcaatacattaatttttatatattttcctttttcatatccttaacca 13574185  T
Q  557 gt 558  Q
    ||    
T  13574186 gt 13574187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 12356299 - 12356361
Alignment:
Q  95 caagcttgaaaagaagaaggaaacaatggccaaagattacaaggatcaaacgccagttccatt 157  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12356299 caagcttgaaaagaagaaggaaacaatggctaaagattacaaggatcaaacgccagttccatt 12356361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 407 - 547
Target Start/End: Original strand, 4022480 - 4022625
Alignment:
Q  407 ggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaagg----gattaccataaaaggaaactgtttttgactttattatgaattaat 500  Q
    |||| ||||||||||||||||  || || ||||| |||||| |||||||||     |||| |||||||||||||||||| |||||||||||| |||||||    
T  4022480 ggtcctgctaaccggtgcccccgggacactggttaaacatatcataaaaggaaattattatcataaaaggaaactgtttctgactttattataaattaat 4022579  T
Q  501 tacacattttcaatgtattaactactatataatttcctttttcatat 547  Q
    |||| | |||||||  |||||||||||| ||||||| ||||||||||    
T  4022580 tacagaatttcaatacattaactactat-taatttcttttttcatat 4022625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 457 - 542
Target Start/End: Original strand, 15079016 - 15079100
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 542  Q
    |||| |||||||||||| ||||||||||||| |||| ||||||||||||| |||||||  ||||||||||||||||||||||||||    
T  15079016 attatcataaaaggaaattgtttttgacttt-ttataaattaattacacaatttcaatacattaactactatataatttccttttt 15079100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 457 - 542
Target Start/End: Complemental strand, 39531952 - 39531868
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 542  Q
    ||||||||||||| |||||| |||||||| | |||| ||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  39531952 attaccataaaagaaaactggttttgactct-ttataaattaattacacaatttcaatgcattaactactatataatttccttttt 39531868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 442 - 547
Target Start/End: Original strand, 25782871 - 25782977
Alignment:
Q  442 cataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc 537  Q
    ||||||||||||||||    ||| |||||||| ||| |||||||||||||||||| || |||||||||| |||||||| ||||   ||||||||||||||    
T  25782871 cataccataaaagggaattattatcataaaagaaaattgtttttgactttattataaaataattacacaatttcaatgcatta---actatataatttcc 25782967  T
Q  538 tttttcatat 547  Q
    ||||||||||    
T  25782968 tttttcatat 25782977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 460 - 585
Target Start/End: Original strand, 34123085 - 34123211
Alignment:
Q  460 accataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 559  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||  ||||| | |||||||| ||||||||||| |||||  |||  | |||||||     
T  34123085 accataaaaggaaactgtttttgacttt-ttataaattaattacacaaattcaaagcattaactattatataatttcttttttagtatgctcaaccagta 34123183  T
Q  560 cccgggag--accggtaagcatttccct 585  Q
    ||| ||||  |||||| |||||||||||    
T  34123184 ccccggaggcaccggttagcatttccct 34123211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 457 - 535
Target Start/End: Complemental strand, 15146760 - 15146683
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataattt 535  Q
    |||| |||||||||||| | ||||||||||| |||| ||||||||| ||| ||||||||||||||||| ||||||||||    
T  15146760 attatcataaaaggaaattatttttgacttt-ttataaattaattatacaatttcaatgtattaactattatataattt 15146683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 457 - 542
Target Start/End: Complemental strand, 10820611 - 10820528
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 542  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||||| ||| | ||||||||||||||| | ||||||||| |||||    
T  10820611 attaccataaaaggaaactgtttttaacttt-ttataaattaatta-acaatctcaatgtattaactattttataatttctttttt 10820528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 443 - 547
Target Start/End: Complemental strand, 25772258 - 25772149
Alignment:
Q  443 ataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaacta-ctatataatttcc 537  Q
    |||||||||||||||    ||| |||||| ||||| | |||||||||||||||| ||||||||||||| ||||| || ||||| ||  | ||||||||||    
T  25772258 ataccataaaagggaattattatcataaagggaaattatttttgactttattataaattaattacacaatttcattgcattaattatttttataatttcc 25772159  T
Q  538 tttttcatat 547  Q
    ||||||||||    
T  25772158 tttttcatat 25772149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 12356205 - 12356247
Alignment:
Q  24 gtgttgcttggatcacacctaactttatcttgcagatatatat 66  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  12356205 gtgttgcttggatcacacataactttatcttgcagatatatat 12356247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 40210306 - 40210252
Alignment:
Q  489 ttatgaattaattacac-attttcaatgtattaactactatataatttccttttt 542  Q
    ||||||||||||||||| |||||||||| | ||||||||||| ||||||||||||    
T  40210306 ttatgaattaattacaccattttcaatgcaataactactataaaatttccttttt 40210252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 586
Target Start/End: Original strand, 44854419 - 44854528
Alignment:
Q  480 ttgactttattatgaattaattacaca-ttttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggag-accggtaag 576  Q
    |||||||  ||||| |||||||| ||| ||||||||| | ||| ||  ||||||||||||||||  |||| |||||||||| |||||||| |||||| ||    
T  44854419 ttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttcctttttattatccttaaccagtgccccgggagtaccggttag 44854518  T
Q  577 catttccctt 586  Q
    ||||||||||    
T  44854519 catttccctt 44854528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 478 - 542
Target Start/End: Complemental strand, 20431547 - 20431482
Alignment:
Q  478 ttttgactttattatgaattaattacaca-ttttcaatgtattaactactatataatttccttttt 542  Q
    |||||||||| ||  | |||||||||||| ||||||||| | ||||||| ||||||||||||||||    
T  20431547 ttttgactttttttagtattaattacacagttttcaatgcaataactacaatataatttccttttt 20431482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 2e-48; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 403 - 586
Target Start/End: Original strand, 24798400 - 24798590
Alignment:
Q  403 tttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaat 496  Q
    |||||||| ||||||| ||||||||  ||||| ||||| | ||||| ||||||||||    ||||||||||||||||||||||||||||||||||| |||    
T  24798400 tttgggtcctgctaactggtgcccccggggcactggttaagcatactataaaagggaattattaccataaaaggaaactgtttttgactttattataaat 24798499  T
Q  497 taattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag-accggtaagcatttccctt 586  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| | ||| |||||||||| | |||||| ||||||||||||    
T  24798500 taattacacaatttcaatgcattaactactatataatttcctttttcatatcctcaacaagtgcccgggggcaccggttagcatttccctt 24798590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 406 - 565
Target Start/End: Original strand, 42044294 - 42044458
Alignment:
Q  406 gggtcatgctaaccggtgccccggg-cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaat 500  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||||||||||    |||||||||||| |||||||||||||| ||||||| |||||||    
T  42044294 gggtcatgctaaccggtgccccggggcactggttaaacataccataaaagggaattattaccataaaagaaaactgtttttgacattattataaattaat 42044393  T
Q  501 tacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccggg 565  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||||| | |||||| |||||||||    
T  42044394 tacacaatttcaatctattaactactatataatttcttttttcatacctttaaccggtgcccggg 42044458  T

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Target: chr7; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 403 - 589
Target Start/End: Complemental strand, 4628755 - 4628561
Alignment:
Q  403 tttgggtcatgctaaccggtgccccg--ggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaat 496  Q
    |||||||| ||||||||||||||||   |||| ||||| | ||||||||||||||||    |||||||||||| ||||||||| |||||||||||| |||    
T  4628755 tttgggtcctgctaaccggtgcccctaaggcactggttaagcataccataaaagggaattattaccataaaagtaaactgtttctgactttattataaat 4628656  T
Q  497 taattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctttta 589  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||  |||  | |||| |||||||||||||||    
T  4628655 taattaaacaatttcaatgtattaactactatataatttcctttttcatatccttaaccggtgccccaggggcatcggttagcatttccctttta 4628561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 442 - 585
Target Start/End: Complemental strand, 47839640 - 47839492
Alignment:
Q  442 cataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc 537  Q
    ||||||||||||||||    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||    
T  47839640 cataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgtattaactattatataaattcc 47839541  T
Q  538 tttttcatatcattaaccagt-gcccgggagaccggtaagcatttccct 585  Q
    ||||||||||| |||||||||  ||||||| |||||| |||||||||||    
T  47839540 tttttcatatccttaaccagtaccccgggacaccggttagcatttccct 47839492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 414 - 562
Target Start/End: Complemental strand, 30810833 - 30810679
Alignment:
Q  414 ctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacat 507  Q
    ||||||||| ||||  ||||||||||| |||||||||||||||  |    |||||||||||| |||||||||||||||||||||| |||||||||||||     
T  30810833 ctaaccggtacccctggggcattggttaaacataccataaaagaaaattattaccataaaagaaaactgtttttgactttattataaattaattacacaa 30810734  T
Q  508 tttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  30810733 tttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccc 30810679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 442 - 585
Target Start/End: Complemental strand, 5239433 - 5239284
Alignment:
Q  442 cataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc 537  Q
    ||||||||||||||||    ||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||||||||||||||||    
T  5239433 cataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcc 5239334  T
Q  538 tttttcatatcattaaccagtgcccgggag--accggtaagcatttccct 585  Q
    ||||||||| ||||||||||||| | ||||  |||||| |||||||||||    
T  5239333 tttttcataccattaaccagtgctccggaggcaccggttagcatttccct 5239284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 414 - 555
Target Start/End: Complemental strand, 47083232 - 47083086
Alignment:
Q  414 ctaaccggtgccccgg-gcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacatt 508  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||    |||||||||||||||||||||||| |||||||||| ||||||||||||| |    
T  47083232 ctaaccggtgccccggagcattggttaaacatatcataaaagggaattattaccataaaaggaaactgtttttaactttattatcaattaattacacaat 47083133  T
Q  509 ttcaatgtattaactactatataatttcctttttcatatcattaacc 555  Q
    ||||||  |||||||||||||||||||| ||||||||||| ||||||    
T  47083132 ttcaatacattaactactatataatttcttttttcatatccttaacc 47083086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 405 - 584
Target Start/End: Complemental strand, 24438664 - 24438477
Alignment:
Q  405 tgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||||||||||| ||||||| |||||    
T  24438664 tgggtcctgctaaccggtgcccccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaatta 24438565  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 584  Q
    |||||| | |||||||| ||||||||||||||| |||||||||||||| | ||||| |||||||  |||  |||||| ||||||||||    
T  24438564 attacataatttcaatgcattaactactatatagtttcctttttcatacccttaactagtgccccgggggcaccggttagcatttccc 24438477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 406 - 586
Target Start/End: Original strand, 12218437 - 12218624
Alignment:
Q  406 gggtcatgctaaccggtgccccggg-cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaat 500  Q
    ||||| |||||||||||| |||||| || ||||| ||||||||||||||| ||    |||||||||||||||||| ||||| | |||||||| |||||||    
T  12218437 gggtcctgctaaccggtgtcccggggcactggttaaacataccataaaagagaattattaccataaaaggaaactattttttattttattataaattaat 12218536  T
Q  501 tacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctt 586  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||  ||| |||||||||  |||  |||||| ||||||||||||    
T  12218537 tacacaatttcaatgcattaactactatataatttcctttttcatatacttatccagtgccccgggggcaccggttagcatttccctt 12218624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 432 - 583
Target Start/End: Complemental strand, 28588067 - 28587911
Alignment:
Q  432 attggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 527  Q
    ||||||| ||||||||||||||||||    |||||||||||| ||| |||||||||||||||||| ||||||||||||| |||||||  ||| |||||||    
T  28588067 attggttaaacataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattgactacta 28587968  T
Q  528 tataatttcctttttcatatcattaaccagtgcccgggag-accggtaagcatttcc 583  Q
    ||||||||||||||||||||| |||||||||| ||||| | |||||| |||||||||    
T  28587967 tataatttcctttttcatatccttaaccagtgtccgggggcaccggttagcatttcc 28587911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 405 - 588
Target Start/End: Original strand, 29993486 - 29993677
Alignment:
Q  405 tgggtcatgctaaccggtgcc-ccggg-cattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| ||||||||| |||| ||||| || ||||| | ||||||||||||||||    |||||||||||||||| || ||||||||||||||| |||||    
T  29993486 tgggtcctgctaaccgatgcctccgggacactggttaagcataccataaaagggaattattaccataaaaggaaattgattttgactttattataaatta 29993585  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctttt 588  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| ||||||  |||  ||| || ||||||||||||||    
T  29993586 attacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtgccccgggggcacccgttagcatttccctttt 29993677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 406 - 586
Target Start/End: Complemental strand, 34333469 - 34333282
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  |||||  |||| |||||||||||||| |||    ||||||||||||||||||||||| ||| ||||||| ||||||    
T  34333469 gggtcctgctaaccggtgcccccggggcacgggttaaacataccataaaaaggaattattaccataaaaggaaactgtttt-gacattattataaattaa 34333371  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctt 586  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||| | |||||||||||||  |||  |||||| ||||||||||||    
T  34333370 ttacacaatttcaatgcattaattactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctt 34333282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 406 - 567
Target Start/End: Complemental strand, 34606447 - 34606280
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||| ||  |||||  |||| | |||||||||||||| |    ||||||||||||||||||| ||||||||||||||| ||||||    
T  34606447 gggtcctgctaaccggtgctcccggggcacgggttaagcataccataaaaggtaattattaccataaaaggaaactgcttttgactttattataaattaa 34606348  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag 567  Q
    || |||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||| ||||    
T  34606347 tttcacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgccccggag 34606280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 428 - 573
Target Start/End: Original strand, 23363191 - 23363341
Alignment:
Q  428 gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 523  Q
    ||||| ||||| ||||||||||||||| ||    |||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  23363191 gggcactggttaaacataccataaaagagaaatattaccataaaaggaaactgtttttaactttattataaattaattacacaatttcaatgcattaact 23363290  T
Q  524 actatataatttcctttttcatatcattaaccagtgc-ccgggagaccggt 573  Q
    |||||| ||||||||||||| |||| ||||| ||||| |||||| ||||||    
T  23363291 actatacaatttcctttttcttatccttaacgagtgctccgggacaccggt 23363341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 462 - 585
Target Start/End: Original strand, 27456175 - 27456299
Alignment:
Q  462 cataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcc 561  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||| |||| |||||| ||||||||||||    
T  27456175 cataaaaggaaactgcttttgactttattataaattaattacacaatttcaatgcattaactactatataatttctttttccatatccttaaccagtgcc 27456274  T
Q  562 cgggag-accggtaagcatttccct 585  Q
    |||| | ||| || |||||||||||    
T  27456275 cgggggcaccagttagcatttccct 27456299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 457 - 560
Target Start/End: Original strand, 8754642 - 8754745
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||  |||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  8754642 attaccataaaacaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcatttttcatatccttaacca 8754741  T
Q  557 gtgc 560  Q
    ||||    
T  8754742 gtgc 8754745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 397 - 559
Target Start/End: Original strand, 525067 - 525234
Alignment:
Q  397 ttttaatttgggtcatgctaaccggtgccccgg-gcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttatta 491  Q
    |||| ||||||||| ||||||||||||| |||| | | ||||| |||||| |||||||| ||    |||||||||||||||||||||||||| |||||||    
T  525067 tttttatttgggtcctgctaaccggtgctccggagtactggttaaacatatcataaaagagaattattaccataaaaggaaactgtttttgattttatta 525166  T
Q  492 tgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 559  Q
    | ||||||||| ||| |||||||| |||||||||| |||| ||| |||||||||||| ||||||||||    
T  525167 taaattaattatacaatttcaatgcattaactactgtatacttttctttttcatatctttaaccagtg 525234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 457 - 586
Target Start/End: Complemental strand, 18486090 - 18485959
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||  ||||| |||||||||||||||||||  ||||| |||||||    
T  18486090 attaccataaaaggaaactgtttttaactttattataaattaattacacaatttcaatacattaattactatataatttccttttcaatatccttaacca 18485991  T
Q  557 gtgccc--gggagaccggtaagcatttccctt 586  Q
    ||||||  |||  |||||| ||||||||||||    
T  18485990 gtgccccgggggcaccggttagcatttccctt 18485959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 459 - 555
Target Start/End: Original strand, 34546373 - 34546469
Alignment:
Q  459 taccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacc 555  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||    
T  34546373 taccataaaagtaaactgtttttgactttactataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacc 34546469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 457 - 584
Target Start/End: Original strand, 43594093 - 43594222
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||| ||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||| |||||||| ||||||||||||||||| ||||| |||||||    
T  43594093 attatcataagaggaaactgtttttgactttattataaattaattatacaatttcaatgcattaactattatataatttccttttttatatccttaacca 43594192  T
Q  557 gtg--cccgggagaccggtaagcatttccc 584  Q
    |||  || |||| |||||| ||||||||||    
T  43594193 gtgttccggggacaccggttagcatttccc 43594222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 428 - 557
Target Start/End: Complemental strand, 45045932 - 45045799
Alignment:
Q  428 gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 523  Q
    ||||| ||||| | ||||||||||||||||    ||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||| |    
T  45045932 gggcactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaatt 45045833  T
Q  524 actatataatttcctttttcatatcattaaccag 557  Q
    ||||||||||||| ||||||||| | ||||||||    
T  45045832 actatataatttcatttttcatacccttaaccag 45045799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 471 - 558
Target Start/End: Original strand, 11686395 - 11686482
Alignment:
Q  471 aaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  11686395 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagt 11686482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 412 - 556
Target Start/End: Original strand, 13064882 - 13065033
Alignment:
Q  412 tgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttt-tgactttattatgaattaattaca 504  Q
    ||||||||||||||||  | ||| ||||| | ||||||||||||||||    ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  13064882 tgctaaccggtgcccctagagcactggttaagcataccataaaagggaattattaccataaaaggaaactgttttttgactttattataaattaattaca 13064981  T
Q  505 cattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||  ||||||  ||||| || ||||||||||||||||||||||| |||||||    
T  13064982 caaattcaatacattaaatattatataatttcctttttcatatccttaacca 13065033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 442 - 562
Target Start/End: Complemental strand, 47657126 - 47657004
Alignment:
Q  442 cataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc 537  Q
    ||||||||||||||||    |||||||||||  |||||| |||| |||||||||| ||||||||||||| |||||||| ||||| ||||||||||||| |    
T  47657126 cataccataaaagggaattattaccataaaa--aaactgcttttaactttattataaattaattacacaatttcaatgcattaattactatataattttc 47657029  T
Q  538 tttttcatatcattaaccagtgccc 562  Q
    ||||||||||| |||||||||||||    
T  47657028 tttttcatatccttaaccagtgccc 47657004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 412 - 562
Target Start/End: Complemental strand, 1737159 - 1737004
Alignment:
Q  412 tgctaaccggtgc--cccgggcattggttgaacataccataaaagggattac---cataaaaggaaactgtttttgactttattatgaattaattacaca 506  Q
    |||||||||||||  || ||||| ||||| | |||||||||||| | ||||    |||||| ||||| ||||||| |||||||||| ||||||||||||     
T  1737159 tgctaaccggtgcttccggggcactggttaagcataccataaaatgaattattatcataaatggaaaatgtttttaactttattatcaattaattacact 1737060  T
Q  507 ttttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
     |||||||| |||||||| ||||||||||| ||||||||||| |||||||||||||    
T  1737059 atttcaatgcattaactattatataatttcatttttcatatccttaaccagtgccc 1737004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 457 - 559
Target Start/End: Original strand, 7689257 - 7689359
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||| |||| || |||||||||||| ||||| |||| ||    
T  7689257 attaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaattactgtaaaatttccttttttatatccttaatca 7689356  T
Q  557 gtg 559  Q
    |||    
T  7689357 gtg 7689359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 406 - 536
Target Start/End: Original strand, 37674106 - 37674240
Alignment:
Q  406 gggtcatgctaaccggtgccccgggcattggttgaacataccataaaagggat----taccataaaaggaaactgtttttgactttattatgaattaatt 501  Q
    ||||| |||||||||||||||||| || ||||| | ||||||||||||   |     || |||||||| |||||||||||||||||||||| ||||||||    
T  37674106 gggtcctgctaaccggtgccccggacactggttaagcataccataaaaaaaaaattatatcataaaagaaaactgtttttgactttattataaattaatt 37674205  T
Q  502 acacattttcaatgtattaactactatataatttc 536  Q
    ||||| |||||||| ||||||||||||||||||||    
T  37674206 acacaatttcaatgcattaactactatataatttc 37674240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 457 - 547
Target Start/End: Complemental strand, 18117272 - 18117182
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatat 547  Q
    ||||| ||||||  |||||||||||||||||||||| ||||||||||||| |||||||  |||||||||||||||||||||| ||||||||    
T  18117272 attactataaaaaaaaactgtttttgactttattataaattaattacacaatttcaatacattaactactatataatttcctctttcatat 18117182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 462 - 562
Target Start/End: Original strand, 37631604 - 37631704
Alignment:
Q  462 cataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcc 561  Q
    |||||||||||||||||||||| |||||||| ||||||||||| | ||| |||| ||||| || ||||||||||||||||| ||||| |||||| |||||    
T  37631604 cataaaaggaaactgtttttgattttattataaattaattacataattttaatgcattaattattatataatttccttttttatatccttaacccgtgcc 37631703  T
Q  562 c 562  Q
    |    
T  37631704 c 37631704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 435 - 556
Target Start/End: Complemental strand, 46716793 - 46716668
Alignment:
Q  435 ggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatat 530  Q
    |||| ||||||||||||||||||    ||| |||||||||||| | |||||||||||||||| ||||||||||| | ||||| || ||||| || |||||    
T  46716793 ggttaaacataccataaaagggaattattatcataaaaggaaaatatttttgactttattataaattaattacataatttcagtgcattaagtattatat 46716694  T
Q  531 aatttcctttttcatatcattaacca 556  Q
    |||||||||||| ||||| |||||||    
T  46716693 aatttccttttttatatctttaacca 46716668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 457 - 560
Target Start/End: Complemental strand, 5729475 - 5729372
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||| ||||||| ||| | |||||||||||||||| |||||||||||   |||||||  |||||||| ||||||||||||||||||||||| |||||||    
T  5729475 attactataaaagaaaattatttttgactttattatcaattaattacattatttcaatacattaactattatataatttcctttttcatatccttaacca 5729376  T
Q  557 gtgc 560  Q
    ||||    
T  5729375 gtgc 5729372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 457 - 581
Target Start/End: Complemental strand, 28262155 - 28262034
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||||||| | ||||||     |||||||||||||||||||||||||||||| ||||||     
T  28262155 attactataaaaggaaactgtttttgattttattatcaattaattacataatttcaa-----taactactatataatttcctttttcatatccttaaccg 28262061  T
Q  557 gtgcccgggag--accggtaagcattt 581  Q
    ||| || ||||  |||||| |||||||    
T  28262060 gtgacccggaggcaccggttagcattt 28262034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 457 - 542
Target Start/End: Original strand, 18469997 - 18470081
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 542  Q
    |||||||||||| | |||||||||||||||| | || ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  18469997 attaccataaaatgtaactgtttttgacttt-tcataaattaattacacaatttcaatgtattaactgctatataatttccttttt 18470081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 457 - 547
Target Start/End: Complemental strand, 33636581 - 33636491
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatat 547  Q
    ||||||||||||  ||||| ||||| |||||||||| ||||||||||||| |||||||| ||||| || |||||||||| |||||||||||    
T  33636581 attaccataaaaataaactattttttactttattataaattaattacacaatttcaatgaattaattattatataattttctttttcatat 33636491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 457 - 541
Target Start/End: Complemental strand, 22739953 - 22739868
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttatt-atgaattaattacacattttcaatgtattaactactatataatttcctttt 541  Q
    ||||||||||||| ||||||||||| | ||| || || ||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  22739953 attaccataaaagaaaactgtttttaattttttttataaattaattacacaatttcaatgcattaactactatatactttcctttt 22739868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 36437505 - 36437405
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||| |||||||| ||||| ||||||||||| |||| ||||||||| ||| |||||||| |||| ||||||||||||| |||||||  |||| |||||||    
T  36437505 attatcataaaagaaaactatttttgacttt-ttataaattaattaaacaatttcaatgaattacctactatataattacctttttagtatccttaacca 36437407  T
Q  557 gt 558  Q
    ||    
T  36437406 gt 36437405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 476 - 566
Target Start/End: Complemental strand, 3022000 - 3021911
Alignment:
Q  476 gtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccggga 566  Q
    |||| ||||||| |||| ||||||||| ||| ||||||||||||||||| ||||||||||||||||| ||||  |||||| || |||||||    
T  3022000 gtttatgacttt-ttataaattaattatacaatttcaatgtattaactagtatataatttcctttttaatatgcttaacccgtacccggga 3021911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 471 - 560
Target Start/End: Original strand, 4100595 - 4100684
Alignment:
Q  471 aaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc 560  Q
    ||||||||||||| || ||||| ||||||| ||| | ||| |||  ||||| |||||||||||||||||||||||||| |||||| ||||    
T  4100595 aaactgtttttgatttgattataaattaataacataattttaatacattaattactatataatttcctttttcatatccttaaccggtgc 4100684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 471 - 556
Target Start/End: Original strand, 29835775 - 29835860
Alignment:
Q  471 aaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||| |||||||||  |||||||||| || ||| |||  |||||||| ||||||| ||||||||||||||| |||||||    
T  29835775 aaactgtttttaactttattacaaattaattacgcaattttaatacattaactagtatataacttcctttttcatatctttaacca 29835860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 567
Target Start/End: Complemental strand, 22973668 - 22973617
Alignment:
Q  516 tattaactactatataatttcctttttcatatcattaaccagtgcccgggag 567  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  22973668 tattaactactatataatttctttttttatatcattaaccagtgccccggag 22973617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 23357767 - 23357861
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaac 554  Q
    |||| |||||| ||||||||||||||||||| |||| ||||||||| ||   |  |||| ||||||||||||| ||||| |||||||||||| |||||    
T  23357767 attatcataaatggaaactgtttttgacttttttataaattaattatac---tgaaatgcattaactactatacaattttctttttcatatccttaac 23357861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 559
Target Start/End: Complemental strand, 4087750 - 4087650
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||| |||||||||||||   | |||| ||||||| ||||  |||||||| ||||||||||||||||||||||||||  |||  |||||||    
T  4087750 attaccataaaag-aaactgtttttgaaact-ttataaattaatcacactatttcaatgcattaactactatataatttcctttttagtatgcttaacca 4087653  T
Q  557 gtg 559  Q
    |||    
T  4087652 gtg 4087650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 511
Target Start/End: Original strand, 47118046 - 47118100
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttc 511  Q
    |||||||||||||||||||| | ||||||||||||| ||||||||||||| ||||    
T  47118046 attaccataaaaggaaactgctcttgactttattataaattaattacacaatttc 47118100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 457 - 542
Target Start/End: Original strand, 18220728 - 18220812
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 542  Q
    ||||||||||||| ||||| |||||| | || |||| ||||||||||||| |||| ||  ||||| ||||||||||||||||||||    
T  18220728 attaccataaaagaaaactatttttgccatt-ttataaattaattacacaatttctatacattaattactatataatttccttttt 18220812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 495 - 542
Target Start/End: Original strand, 41468726 - 41468774
Alignment:
Q  495 attaattacaca-ttttcaatgtattaactactatataatttccttttt 542  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  41468726 attaattacacaattttcaatgtaataattactatataatttccttttt 41468774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 494 - 565
Target Start/End: Original strand, 18220625 - 18220696
Alignment:
Q  494 aattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccggg 565  Q
    ||||||||||||| |||||||  | ||| ||||||||||||||||||||  |||  |||||||| |||||||    
T  18220625 aattaattacacaatttcaatacagtaattactatataatttcctttttagtattcttaaccagcgcccggg 18220696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 586
Target Start/End: Original strand, 34556887 - 34557078
Alignment:
Q  401 aatttgggtcatgctaaccggtgccccgggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaat 496  Q
    |||| ||||||||||||||||||||||||||| ||||| | ||||| | |||||| |    ||||| ||||| |||| | || |||||||  ||||| ||    
T  34556887 aattagggtcatgctaaccggtgccccgggcactggttaagcatacaaaaaaaggaaattcttaccctaaaa-gaaagttttgttgacttatttatggat 34556985  T
Q  497 taattacac-attttcaatgtattaactactatataattt-cctttttcatatcattaaccagtg-cccgggagaccggtaagcatttccctt 586  Q
    |||||| || |||||||||| | ||| ||  ||||||||| |||||||  |||| ||||||| || ||||||  ||| || ||||||||||||    
T  34556986 taattaaacaattttcaatgcaataattaacatataatttccctttttattatccttaaccaatgccccggggcaccagttagcatttccctt 34557078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 406 - 590
Target Start/End: Original strand, 6110 - 6302
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggg----attaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  |||||  |||| |||||||||||||||||    |||||||||||||||||||||||||||||||||||| | ||||    
T  6110 gggtcctgctaaccggtgcccccggggcacgggttaaacataccataaaaggggattattaccataaaaggaaactgtttttgactttattataatttaa 6209  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttcccttttaa 590  Q
    ||||||| || ||||| ||||||||||||||| |||||||||||||||| |||||||||||||  |||  |||||| ||||||||| ||||||    
T  6210 ttacacaattccaatgcattaactactatatagtttcctttttcatatccttaaccagtgccccaggggcaccggttagcatttcctttttaa 6302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 2e-45; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 405 - 585
Target Start/End: Complemental strand, 272407 - 272219
Alignment:
Q  405 tgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| ||||||||||||||||  |||||  | || | ||||||||||||||||    |||||||||||||||||| |||||||||||||||| |||||    
T  272407 tgggtcctgctaaccggtgcccccggggcaccgattaagcataccataaaagggaattattaccataaaaggaaactatttttgactttattataaatta 272308  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccct 585  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||  |||  |||||| |||||||||||    
T  272307 attacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccct 272219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 405 - 588
Target Start/End: Complemental strand, 46352821 - 46352630
Alignment:
Q  405 tgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| |||||||||||||| |  |||||  |||| | ||||||||||||||||    |||||||||||||||||||||| |||||||||||| |||||    
T  46352821 tgggtcctgctaaccggtgcctccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaactgtttctgactttattatcaatta 46352722  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctttt 588  Q
    |||||||| |||||||| |||||||||| ||||||||||||||||||||| |||||||||||||  |||  |||||| ||||||||||||||    
T  46352721 attacacaatttcaatgcattaactactgtataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccctttt 46352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 406 - 584
Target Start/End: Complemental strand, 43787057 - 43786871
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||  ||    ||||||||||||||||||||||||||  ||||||| ||||||    
T  43787057 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgatattattataaattaa 43786958  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccc 584  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||  |||||| ||||||||||    
T  43786957 ttacacaatttcaatgcattaactactatataatttcctttttcataccattaaccagtgccccggaggcaccggttagcatttccc 43786871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 406 - 584
Target Start/End: Complemental strand, 48725457 - 48725271
Alignment:
Q  406 gggtcatgctaaccggtg--ccccgggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||||| |||  ||| ||||| ||||| | ||||||||||||||||    ||||||||||||||||||||||||||||||||||| ||||||    
T  48725457 gggtcctgctaacccgtggtcccggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaa 48725358  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg--cccgggagaccggtaagcatttccc 584  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||  ||||||  |||||| ||||||||||    
T  48725357 ttacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 48725271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 400 - 585
Target Start/End: Complemental strand, 49893523 - 49893330
Alignment:
Q  400 taatttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatg 493  Q
    |||| ||||||  |||||||||||||||  ||||| || || | ||||||||||||||||    |||||||||||||||||||||||||||||||||||     
T  49893523 taatatgggtccggctaaccggtgcccccggggcactgattaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattata 49893424  T
Q  494 aattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccct 585  Q
     |||||||||||| |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||  |||  |||||| |||||||||||    
T  49893423 gattaattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccct 49893330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 406 - 587
Target Start/End: Complemental strand, 52520867 - 52520678
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||  ||    ||||||||||||||||||||||||||| ||||||| ||||||    
T  52520867 gggtcctgctaaccggtgcccccggggcactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgacattattataaattaa 52520768  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttcccttt 587  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||||  |||  |||||| |||||||||||||    
T  52520767 ttacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttcccttt 52520678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 418 - 584
Target Start/End: Complemental strand, 2505523 - 2505350
Alignment:
Q  418 ccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttc 511  Q
    ||||||||||  ||||| ||||| ||||||||||||||||||    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  2505523 ccggtgcccccagggcactggttaaacataccataaaagggaattattaccataaaaggaaactatttttgactttattatgaattaattacacaatttc 2505424  T
Q  512 aatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag-accggtaagcatttccc 584  Q
    |||| | |||||||||||||||||||||||||||||| ||||||| || || |||| | |||| ||||||||||    
T  2505423 aatgcactaactactatataatttcctttttcatatctttaaccaatgtccaggagcagcggttagcatttccc 2505350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 406 - 584
Target Start/End: Complemental strand, 39074604 - 39074419
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||||| ||||| | ||||||||||||||||    ||||||||||||||||||||||| ||| ||||||| ||||||    
T  39074604 gggtcctgctaaccggtgcccctggggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttt-gacattattataaattaa 39074506  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 584  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||||  |||  |||||| ||||||||||    
T  39074505 ttacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 39074419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 457 - 560
Target Start/End: Original strand, 41553997 - 41554100
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  41553997 attaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 41554096  T
Q  557 gtgc 560  Q
    ||||    
T  41554097 gtgc 41554100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 413 - 560
Target Start/End: Complemental strand, 858768 - 858615
Alignment:
Q  413 gctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacaca 506  Q
    |||||||||||||||  |||||  |||| | |||||||||||||| |    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  858768 gctaaccggtgcccccggggcacgggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgactttattatcaattaattacaca 858669  T
Q  507 ttttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc 560  Q
     |||||||| |||||||||||||||||||||||||||||||| ||||| |||||    
T  858668 atttcaatgcattaactactatataatttcctttttcatatccttaactagtgc 858615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 403 - 565
Target Start/End: Original strand, 10617281 - 10617449
Alignment:
Q  403 tttgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaat 496  Q
    |||||||| ||||||||||||||||  |||||  |||| | ||||||||||||||||    |||||||||||||||| |||||||||||||||||| |||    
T  10617281 tttgggtcctgctaaccggtgcccccggggcacgggttaagcataccataaaagggaattattaccataaaaggaaattgtttttgactttattataaat 10617380  T
Q  497 taattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccggg 565  Q
    |||||||||| ||| |||| |||||||||||||||||||||||||| ||||| |||| ||||| |||||    
T  10617381 taattacacaattttaatgcattaactactatataatttccttttttatatccttaatcagtgtccggg 10617449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 440 - 561
Target Start/End: Complemental strand, 2119579 - 2119456
Alignment:
Q  440 aacataccataaaagggattac--cataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc 537  Q
    |||||||||||||||| ||||   |||||||||||| |||||||||||||||||| |||||||||| || |||||||| |||||||||||||||||||||    
T  2119579 aacataccataaaaggaattattacataaaaggaaattgtttttgactttattataaattaattactcaatttcaatgcattaactactatataatttcc 2119480  T
Q  538 tttttcatatcattaaccagtgcc 561  Q
    ||||||||||| ||||||||||||    
T  2119479 tttttcatatctttaaccagtgcc 2119456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 428 - 585
Target Start/End: Complemental strand, 41304165 - 41304004
Alignment:
Q  428 gggcattggttgaacataccataaaagg----gattaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 523  Q
    ||||||||||| | ||||||||||||||     |||||||||||||||||||||||||||||||||||| ||||||||  ||| |||||||| ||||| |    
T  41304165 gggcattggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgactttattatcaattaatt--acaatttcaatgcattaatt 41304068  T
Q  524 actatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccct 585  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||||  |||||| |||||||||||    
T  41304067 actatataatttcctttttcatatccttaaccactgccccggaggcaccggttagcatttccct 41304004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 406 - 584
Target Start/End: Complemental strand, 4168369 - 4168183
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||| |  |||| | ||||||||||||| ||    |||||||||||| |||||||||||||||||||||| ||||||    
T  4168369 gggtcctgctaaccggtgcccccggggtacgggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaa 4168270  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccc 584  Q
    ||||||| |||||||  |||||||||||||||||||||||||| ||||| ||||||||| ||| ||||  |||||| ||||||||||    
T  4168269 ttacacaatttcaatacattaactactatataatttccttttttatatccttaaccagttccccggaggcaccggttagcatttccc 4168183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 403 - 580
Target Start/End: Complemental strand, 7468598 - 7468417
Alignment:
Q  403 tttgggtcatgctaaccggtgccccggg-cattggttgaacataccataaaagggattac---cataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||||| ||||||||||||| ||||| || || || | |||||||||||||||||||    |||||||| |||||| ||||||||||||||| |||||    
T  7468598 tttgggtcctgctaaccggtgctccggggcactgattaagcataccataaaagggattattatcataaaagaaaactgcttttgactttattataaatta 7468499  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggagaccggtaagcatt 580  Q
    |||| ||| |||||||| ||||||||||||||||||||||||||||| || |||||||||| || || | ||||| ||||||    
T  7468498 attatacaatttcaatgcattaactactatataatttcctttttcatttccttaaccagtgtcccgggggccggttagcatt 7468417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 407 - 562
Target Start/End: Original strand, 49529269 - 49529431
Alignment:
Q  407 ggtcatgctaaccggtgccccgggcattggttgaacataccataaaagg----gattaccataaaaggaaactgtttttgactttattatgaattaatta 502  Q
    |||| |||||||||||||||| |||| ||||| ||||||||||||||||     ||||||||||||||||| |||||||||||||||||| |||||||||    
T  49529269 ggtcttgctaaccggtgcccccggcactggttaaacataccataaaaggaaattattaccataaaaggaaaatgtttttgactttattataaattaatta 49529368  T
Q  503 cacattttcaatgtattaactac---tatataatttcctttttcatatcattaaccagtgccc 562  Q
    || | |||||||| |||||||||   |||||||||| |||||||||||| |||| ||||||||    
T  49529369 cataatttcaatgcattaactactagtatataattttctttttcatatccttaatcagtgccc 49529431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 406 - 586
Target Start/End: Original strand, 40362580 - 40362768
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||| |||| ||||  ||||| ||||| | ||||||||||||| ||    |||||||||||| |||||||||||||||||||||| ||||||    
T  40362580 gggtcctgctaatcggtacccccggggcactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattatcaattaa 40362679  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccctt 586  Q
    ||||||| ||| |||| |||||||||||||||||||| ||||||||||| |||| |||||||| ||||  || ||| ||||||||||||    
T  40362680 ttacacaattttaatgcattaactactatataatttcttttttcatatccttaatcagtgccccggaggcacgggttagcatttccctt 40362768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 457 - 564
Target Start/End: Complemental strand, 22249015 - 22248908
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||  | |||||||||||||||||||||||||||||| ||||| |    
T  22249015 attaccataaaagaaaactgtttttgactttattatcaattaattacacaatttcaatacaataactactatataatttcctttttcatatccttaacta 22248916  T
Q  557 gtgcccgg 564  Q
    ||||||||    
T  22248915 gtgcccgg 22248908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 457 - 584
Target Start/End: Complemental strand, 20924121 - 20923992
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||| ||||||||||||||||||||  ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||    
T  20924121 attaccttaaaaggaaactgtttttgatattattataaattaattacacaatttcaatgaattaactactatataatttcctttttcatacccttaacca 20924022  T
Q  557 gtgcccggga--gaccggtaagcatttccc 584  Q
    |||||| |||   |||||| ||||||||||    
T  20924021 gtgccccggaagcaccggttagcatttccc 20923992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 13160026 - 13159929
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaac 554  Q
    |||||| ||| || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  13160026 attaccgtaatagaaaactgtttttgactttattatcaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaac 13159929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 412 - 561
Target Start/End: Complemental strand, 42548274 - 42548120
Alignment:
Q  412 tgctaaccggtgccccgg-gcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacaca 506  Q
    |||||||||||| ||||| ||| ||||| | ||||||||||||||||    ||||||||||| |||| | |||||||||||||||| ||||||||||| |    
T  42548274 tgctaaccggtgtcccggagcactggttaagcataccataaaagggaattattaccataaaatgaaattatttttgactttattataaattaattacata 42548175  T
Q  507 ttttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcc 561  Q
     |||||||| |||||||||||||||||||| ||||||||||| |||| |||||||    
T  42548174 atttcaatgcattaactactatataatttcttttttcatatctttaagcagtgcc 42548120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 457 - 562
Target Start/End: Original strand, 42964306 - 42964411
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||| |||||||    
T  42964306 attactataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactataaaatttcatttttcatatccttaacca 42964405  T
Q  557 gtgccc 562  Q
    ||||||    
T  42964406 gtgccc 42964411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 457 - 562
Target Start/End: Original strand, 53489881 - 53489986
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||| |||| |||||||||||||||||||||||||||||| | |||||||    
T  53489881 attatcataaaaggaaactgtttttgacattattataaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaacca 53489980  T
Q  557 gtgccc 562  Q
    ||||||    
T  53489981 gtgccc 53489986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 406 - 586
Target Start/End: Original strand, 11308211 - 11308398
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaagggatta---ccataaaaggaaactgtttttgactttattatgaattaat 500  Q
    ||||| |||||| |||||||||  ||||||||||| | |||||||||||||| ||||   ||||||||||||||| ||||||| |||||||| |||||||    
T  11308211 gggtcctgctaatcggtgcccctggggcattggttaagcataccataaaaggaattattaccataaaaggaaactatttttgattttattatcaattaat 11308310  T
Q  501 tacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccggg--agaccggtaagcatttccctt 586  Q
    ||||   |||||||| |||||||| ||||||||||||||||||| ||| |||| ||||| || ||  | |||||| ||||||||||||    
T  11308311 tacattatttcaatgcattaactattatataatttcctttttcacatccttaatcagtgtcccggaaacaccggttagcatttccctt 11308398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 406 - 588
Target Start/End: Complemental strand, 18014858 - 18014668
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||| ||||||||  ||||| || || | |||||||||||||| |    ||| |||||||||||||||||||| ||||||||||   ||||    
T  18014858 gggtcttgctaactggtgcccccggggcactgattaagcataccataaaaggaaattattatcataaaaggaaactgtttttaactttattatagtttaa 18014759  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctttt 588  Q
    ||||||| |||||||| ||||||||||||||||||| |||||||||||| |||| ||||||||  |||  ||| || ||||||||||||||    
T  18014758 ttacacaatttcaatgcattaactactatataatttactttttcatatccttaatcagtgccccgggggcaccagttagcatttccctttt 18014668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 443 - 559
Target Start/End: Complemental strand, 28139456 - 28139336
Alignment:
Q  443 ataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcct 538  Q
    |||||||||||||||    ||||||||||||||| ||| ||||||||||||||| ||||||||| ||| |||||||| |||||||||||| ||||||| |    
T  28139456 ataccataaaagggaattattaccataaaaggaatctgcttttgactttattataaattaattatacaatttcaatgcattaactactatttaatttctt 28139357  T
Q  539 ttttcatatcattaaccagtg 559  Q
    |||||||||| ||||||||||    
T  28139356 ttttcatatccttaaccagtg 28139336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 457 - 560
Target Start/End: Original strand, 43269796 - 43269899
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||| ||||||||||||||| ||||| |||||||| ||||||||||| | |||||||| |||||||||||| |||||||| |||||||||| |||||||    
T  43269796 attactataaaaggaaactgtgtttgattttattataaattaattacataatttcaatgcattaactactatgtaatttcccttttcatatccttaacca 43269895  T
Q  557 gtgc 560  Q
    ||||    
T  43269896 gtgc 43269899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 405 - 529
Target Start/End: Complemental strand, 6842806 - 6842676
Alignment:
Q  405 tgggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| ||||||||| ||||||  ||||| ||||| | ||||||||||| ||||    ||||||||||||||||||||||||||||||||||| |||||    
T  6842806 tgggtcctgctaaccgctgcccccggggcactggttaagcataccataaatgggaattattaccataaaaggaaactgtttttgactttattataaatta 6842707  T
Q  499 attacacattttcaatgtattaactactata 529  Q
    |||||||| |||||||| |||||||| ||||    
T  6842706 attacacaatttcaatgcattaactattata 6842676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 2938097 - 2938198
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||| |||| |||||||||||||||||| ||||||| ||||| ||||| || ||||||||||||||||||| |||||| ||||| |||||||    
T  2938097 attaccataaaatgaaattgtttttgactttattataaattaatcacacaatttcagtgcattaactactatataattttcttttttatatctttaacca 2938196  T
Q  557 gt 558  Q
    ||    
T  2938197 gt 2938198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 29241766 - 29241669
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaac 554  Q
    |||| ||||||| ||| ||||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||||||||| |||||||||| |||||    
T  29241766 attatcataaaaagaatctgtttttgactttattataaattaattacataatttcaatgcattaactactatataatttccattttcatatccttaac 29241669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 475 - 567
Target Start/End: Complemental strand, 52246693 - 52246601
Alignment:
Q  475 tgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag 567  Q
    |||||||||||||||||| ||||||||| ||| |||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||| ||||    
T  52246693 tgtttttgactttattataaattaattatacaatttcaatgcattaacaactatataatttcatttttcatatccttaaccagtgccccggag 52246601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 457 - 559
Target Start/End: Original strand, 50395620 - 50395721
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||||||| |||| ||| |||||||||| |||||||| ||||||||||||  ||||||    
T  50395620 attaccataaaaggaaattgtttt-gactttattatcaattaattacacaatttctatgcattaactactgtataattttctttttcatatccctaacca 50395718  T
Q  557 gtg 559  Q
    |||    
T  50395719 gtg 50395721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 457 - 562
Target Start/End: Complemental strand, 24488495 - 24488390
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||||||||| |||||||||||||| |||||||| ||||||||||||  |||| ||| |||||||| ||||||||||||||||| | ||  |||||||    
T  24488495 attaccataaaaagaaactgtttttgattttattatcaattaattacactatttccatgcattaactattatataatttccttttttacattcttaacca 24488396  T
Q  557 gtgccc 562  Q
    ||||||    
T  24488395 gtgccc 24488390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 435 - 584
Target Start/End: Complemental strand, 38852372 - 38852216
Alignment:
Q  435 ggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtatta---actacta 527  Q
    |||| ||||||||||||||| ||    ||| |||||||  |||||||||||||||||||||| ||||||||||||| |||||||| ||||   |||||||    
T  38852372 ggttaaacataccataaaagtgaattattatcataaaataaaactgtttttgactttattataaattaattacacaatttcaatgcattaattactacta 38852273  T
Q  528 tataatttcctttttcatatcattaaccagtgcccgggagaccggtaagcatttccc 584  Q
    ||||||||| ||||| ||||| ||||| | || || || ||||||| ||||||||||    
T  38852272 tataatttcattttttatatccttaacgaatgtcccggggaccggttagcatttccc 38852216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 50299002 - 50299103
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||| | |||| ||||| |||| ||    
T  50299002 attatcataaaaagaaactgtttttgactttattataaattaattacacaatttcagtgcattaactactatataattttcctttttatatctttaatca 50299101  T
Q  557 gt 558  Q
    ||    
T  50299102 gt 50299103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 463 - 547
Target Start/End: Original strand, 41993682 - 41993766
Alignment:
Q  463 ataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatat 547  Q
    ||||||||||||||||||| |||||||||| ||||||||||| | |||||||| |||||||||||||||||||| ||||| ||||    
T  41993682 ataaaaggaaactgtttttaactttattataaattaattacataatttcaatgcattaactactatataatttcatttttaatat 41993766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 457 - 561
Target Start/End: Original strand, 50359243 - 50359347
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||||| ||||| ||||||||||||||||||||||  ||||||||| || |||||||| |||||||||||||||||||  |||||| || | |||||||    
T  50359243 attaccacaaaagaaaactgtttttgactttattatatattaattacccaatttcaatgcattaactactatataattttttttttcttaaccttaacca 50359342  T
Q  557 gtgcc 561  Q
    |||||    
T  50359343 gtgcc 50359347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 457 - 534
Target Start/End: Complemental strand, 33141014 - 33140937
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatt 534  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||||| ||| |||||||| ||||||||||||||||||    
T  33141014 attaccataaaagaaaactgcttttgactttattataaattaattatacaatttcaatgcattaactactatataatt 33140937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 501 - 567
Target Start/End: Complemental strand, 52718252 - 52718186
Alignment:
Q  501 tacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag 567  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  52718252 tacacaattttaatgtattaactactatataatttcctttttcatatccttaaccagtgtccgggag 52718186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 459 - 538
Target Start/End: Complemental strand, 2362958 - 2362880
Alignment:
Q  459 taccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcct 538  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||||  |||||||| |||||||| |||||||||||||    
T  2362958 taccataaaagaaaactgtttttgattttattatcaattaattacactatttcaatgcattaacta-tatataatttcct 2362880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 475 - 550
Target Start/End: Complemental strand, 31514902 - 31514827
Alignment:
Q  475 tgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 550  Q
    ||||||||| |||||||| ||||||||||||| ||| |||  |||||||||||||||||||  |||||||||||||    
T  31514902 tgtttttgattttattataaattaattacacaattttaatacattaactactatataattttatttttcatatcat 31514827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 508 - 562
Target Start/End: Complemental strand, 2391685 - 2391631
Alignment:
Q  508 tttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    |||||||| ||||||||||||||||||||||||||| |||| |||||||||||||    
T  2391685 tttcaatgcattaactactatataatttcctttttcttatccttaaccagtgccc 2391631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 508 - 562
Target Start/End: Complemental strand, 2393446 - 2393392
Alignment:
Q  508 tttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    |||||||| ||||||||||||||||||||||||||| |||| |||||||||||||    
T  2393446 tttcaatgcattaactactatataatttcctttttcttatccttaaccagtgccc 2393392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 457 - 542
Target Start/End: Complemental strand, 21010122 - 21010041
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 542  Q
    |||||||||||| |||||| ||||||||||| |||| ||||||||| ||| |||||||||  ||||||||||||||||||||||||    
T  21010122 attaccataaaaagaaact-tttttgacttt-ttataaattaattatacaatttcaatgt--taactactatataatttccttttt 21010041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 405 - 511
Target Start/End: Complemental strand, 52552659 - 52552549
Alignment:
Q  405 tgggtcatgctaaccggtg-ccccgggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    |||||||||||||||| || |||||| || ||||| || |||||||||||| ||    |||||||||||| | |||||||||||||||||||| ||||||    
T  52552659 tgggtcatgctaaccgatgtccccggacactggttaaatataccataaaagagaattattaccataaaag-atactgtttttgactttattataaattaa 52552561  T
Q  500 ttacacattttc 511  Q
    ||||||| ||||    
T  52552560 ttacacaatttc 52552549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 478 - 542
Target Start/End: Complemental strand, 25743918 - 25743854
Alignment:
Q  478 ttttgactttattatgaattaattacaca-ttttcaatgtattaactactatataatttccttttt 542  Q
    |||||||||| |||||||||||||||||| |||| |||| | ||| ||||||||||||||||||||    
T  25743918 ttttgacttt-ttatgaattaattacacaatttttaatgcaataattactatataatttccttttt 25743854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 526 - 584
Target Start/End: Complemental strand, 2362861 - 2362801
Alignment:
Q  526 tatataatttcctttttcatatcattaaccagtgc-ccgggag-accggtaagcatttccc 584  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||| |||||| ||||||||||    
T  2362861 tatataatttcctttttcatatccttaaccattgcaccgggagcaccggttagcatttccc 2362801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 93; Significance: 8e-45; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 406 - 586
Target Start/End: Complemental strand, 23147 - 22959
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| |||||||||||| ||   ||||| ||||| ||||||||||||||| ||    ||| ||||||||||||||||||||||||||||||| ||||||    
T  23147 gggtcttgctaaccggtgtccttggggcactggttaaacataccataaaagagaattattaacataaaaggaaactgtttttgactttattataaattaa 23048  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc-ccgggag-accggtaagcatttccctt 586  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| | |||||| ||||||||||||    
T  23047 ttacacaatttcaatgtattaattactatataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttccctt 22959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 459 - 565
Target Start/End: Original strand, 7956 - 8062
Alignment:
Q  459 taccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  7956 taccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 8055  T
Q  559 gcccggg 565  Q
    |||||||    
T  8056 gcccggg 8062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 459 - 565
Target Start/End: Complemental strand, 7415 - 7309
Alignment:
Q  459 taccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  7415 taccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagt 7316  T
Q  559 gcccggg 565  Q
    |||||||    
T  7315 gcccggg 7309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 83; Significance: 7e-39; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 428 - 584
Target Start/End: Complemental strand, 15058 - 14896
Alignment:
Q  428 gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 523  Q
    ||||| ||||| | ||||||||||||||||    ||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| || |||||||    
T  15058 gggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaactacacaatttcagtgcattaact 14959  T
Q  524 actatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 584  Q
    ||||||||||||| ||||| ||||| |||||||||||||  |||| |||||| ||||||||||    
T  14958 actatataatttctttttttatatctttaaccagtgccccggggacaccggttagcatttccc 14896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 83; Significance: 7e-39; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 435 - 562
Target Start/End: Complemental strand, 116359 - 116228
Alignment:
Q  435 ggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatat 530  Q
    |||| ||||||||||||||||||    ||| |||||||||||||||||| |||||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  116359 ggttaaacataccataaaagggaattattatcataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatat 116260  T
Q  531 aatttcctttttcatatcattaaccagtgccc 562  Q
    |||||||||||||||||| |||||| ||||||    
T  116259 aatttcctttttcatatctttaacctgtgccc 116228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 404 - 560
Target Start/End: Complemental strand, 865 - 704
Alignment:
Q  404 ttgggtcatgctaaccggtgccccgggc-attggttgaacataccataaaagggatt----accataaaaggaaactgtttttgactttattatgaatta 498  Q
    ||||||| | |||||||||||||||||| ||| ||| | ||||||||||||| || |    |||||||||| |||| ||||||||||||||||| |||||    
T  865 ttgggtcctactaaccggtgccccgggctattagttaagcataccataaaagagaattatcaccataaaagaaaacagtttttgactttattataaatta 766  T
Q  499 attacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc 560  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| ||||    
T  765 attacacaatttcaatggattaactactatataatttcctttttcatatctttaacccgtgc 704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 406 - 585
Target Start/End: Original strand, 53685 - 53872
Alignment:
Q  406 gggtcatgctaaccggtgcccc--gggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaa 499  Q
    ||||| ||||||||||||||||  ||| |  |||| ||||||||||||||||||    |||||||||||||||||| |||||||| |||| || ||||||    
T  53685 gggtcttgctaaccggtgcccccggggaacgggttaaacataccataaaagggaattattaccataaaaggaaactatttttgacattatgataaattaa 53784  T
Q  500 ttacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccct 585  Q
    ||||||| ||| |||| |||||||||||||||||||||||||||||| | |||||||||||||  |||  |||||| |||||||||||    
T  53785 ttacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 53872  T

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Target: scaffold0206 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 459 - 585
Target Start/End: Original strand, 11029 - 11155
Alignment:
Q  459 taccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 558  Q
    |||||||||| |||||||||||||||||||||||   ||||||||||| |||||||| |||||||| ||||||||||||||||||||||| |||||||||    
T  11029 taccataaaatgaaactgtttttgactttattatagtttaattacacaatttcaatgcattaactaatatataatttcctttttcatatccttaaccagt 11128  T
Q  559 gcccgggagaccggtaagcatttccct 585  Q
    | |||||  ||| || |||||||||||    
T  11129 gtccggggcaccagttagcatttccct 11155  T

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Target: scaffold0002 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 146962 - 147059
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaac 554  Q
    |||||| ||| || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  146962 attaccgtaatagaaaactgtttttgactttattatcaattaattacacaatttcaatgtattaactactatataatttcctttttcatatccttaac 147059  T

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Target: scaffold0524 (Bit Score: 68; Significance: 6e-30; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 457 - 560
Target Start/End: Complemental strand, 954 - 851
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    ||||| ||||||||||| || ||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| ||||| |    
T  954 attactataaaaggaaattgattttgactttattataaattaattacacaatttcaatgcattaactactatataattttctttttcatatccttaacta 855  T
Q  557 gtgc 560  Q
    ||||    
T  854 gtgc 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 457 - 562
Target Start/End: Complemental strand, 421 - 316
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||| || |||||||||||||||||||||||||| |||| |||||||| |||||||| |||||||| |||||||||| |||||||||||  |||||||    
T  421 attaccgtagaaggaaactgtttttgactttattataaatttattacacaatttcaatgcattaactattatataattttctttttcatatgcttaacca 322  T
Q  557 gtgccc 562  Q
    ||||||    
T  321 gtgccc 316  T

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Target: scaffold0014 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 404 - 562
Target Start/End: Original strand, 68288 - 68452
Alignment:
Q  404 ttgggtcatgctaaccggtgcc--ccgggcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatt 497  Q
    ||||||| ||||||||| ||||  | ||| | ||||| | ||||||||||||||||    ||||| ||||||||||||| |||| |||||||||| | ||    
T  68288 ttgggtcctgctaaccgatgccttcggggtactggttaagcataccataaaagggaattattaccttaaaaggaaactgattttaactttattataattt 68387  T
Q  498 aattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 562  Q
    | ||||||| ||| |||| |||||||||||||||||||| ||||||||||| |||||||||||||    
T  68388 atttacacaattttaatgcattaactactatataatttcatttttcatatccttaaccagtgccc 68452  T

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Target: scaffold0325 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 435 - 590
Target Start/End: Original strand, 17502 - 17660
Alignment:
Q  435 ggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatat 530  Q
    |||| |||||||||||||| |||    ||| |||||||| |||||||||||||||||||||| |||||||| |||| |||||||| |||| |||||||||    
T  17502 ggttaaacataccataaaaaggaattattatcataaaagaaaactgtttttgactttattataaattaatt-cacaatttcaatgcattagctactatat 17600  T
Q  531 aatttcctttttcatatcattaaccagtgcc-cgggagaccggtaagcatttcccttttaa 590  Q
    ||||| ||||||||||||  ||| ||||||| ||||| | |||| ||||||||||||||||    
T  17601 aattttctttttcatatccgtaaacagtgcctcgggaca-cggttagcatttcccttttaa 17660  T

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Target: scaffold0050 (Bit Score: 64; Significance: 2e-27; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 457 - 564
Target Start/End: Complemental strand, 69355 - 69248
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||||| |||||  |||||| ||||||||||||||| ||||||||||| | ||| |||||||||||||||||||||||| |||||||||||| ||||| |    
T  69355 attaccttaaaaaaaaactgcttttgactttattataaattaattacataattttaatgtattaactactatataatttactttttcatatccttaacga 69256  T
Q  557 gtgcccgg 564  Q
    ||||||||    
T  69255 gtgcccgg 69248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 489 - 560
Target Start/End: Original strand, 33770 - 33841
Alignment:
Q  489 ttatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc 560  Q
    |||| ||||||||||||| ||||||||||||||||| |||||||||||| |||| ||||  ||||| |||||    
T  33770 ttataaattaattacacaatttcaatgtattaactattatataatttccattttaatatacttaacaagtgc 33841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 63; Significance: 6e-27; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 457 - 567
Target Start/End: Complemental strand, 50677 - 50567
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 556  Q
    |||| |||||||| ||| || ||||||||||||||| ||||||||| ||| ||||||   |||||||||||||||||||||||||||||||| |||||||    
T  50677 attatcataaaagaaaattgattttgactttattataaattaattatacaatttcaaaacattaactactatataatttcctttttcatatctttaacca 50578  T
Q  557 gtgcccgggag 567  Q
    |||||| ||||    
T  50577 gtgccccggag 50567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 475 - 559
Target Start/End: Original strand, 53421 - 53505
Alignment:
Q  475 tgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 559  Q
    |||||||||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  53421 tgtttttgactttattataaattaattatacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtg 53505  T

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Target: scaffold0038 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 443 - 555
Target Start/End: Complemental strand, 25865 - 25750
Alignment:
Q  443 ataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcct 538  Q
    |||||||||||||||    |||||||||||| ||| |||||||||||||||||| ||||||||||||| |||||||  ||||| |||||||||| |||||    
T  25865 ataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaattactatataa-ttcct 25767  T
Q  539 ttttcatatcattaacc 555  Q
    |||||||||| ||||||    
T  25766 ttttcatatccttaacc 25750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 405 - 525
Target Start/End: Complemental strand, 10897 - 10771
Alignment:
Q  405 tgggtcatgctaaccggtgccccgg--gcattggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaatta 498  Q
    |||||| ||||||||| |||||| |  ||| ||||| | ||||||||||| ||||    ||||||||||||||||||||||||||||||||||| |||||    
T  10897 tgggtcctgctaaccgctgcccccgaggcactggttaagcataccataaatgggaattattaccataaaaggaaactgtttttgactttattataaatta 10798  T
Q  499 attacacattttcaatgtattaactac 525  Q
    |||||||| |||||||| |||||||||    
T  10797 attacacaatttcaatgcattaactac 10771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 457 - 547
Target Start/End: Complemental strand, 41048 - 40958
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatat 547  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||||||| | |||||||| |||||||| ||||||||||| ||||||||||    
T  41048 attatcataaaaggaaactgtttttgacttcattataaattaattacataatttcaatgcattaactattatataatttcatttttcatat 40958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 435 - 558
Target Start/End: Original strand, 95616 - 95742
Alignment:
Q  435 ggttgaacataccataaaaggga----ttaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatat 530  Q
    |||| ||||||||||||||||||    |||||||||||| |||||||||| ||||||||||| ||||||||||| | |||||||  ||||| || |||||    
T  95616 ggttaaacataccataaaagggaattattaccataaaagaaaactgtttt-gactttattataaattaattacataatttcaattcattaattattatat 95714  T
Q  531 aatttcctttttcatatcattaaccagt 558  Q
    |||||||||||||||||  |||||||||    
T  95715 aatttcctttttcatattcttaaccagt 95742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 464 - 547
Target Start/End: Original strand, 19649 - 19732
Alignment:
Q  464 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatat 547  Q
    ||||||||||||||||||||||||||||| |||| |||||||| |||||||| ||||| || ||||||||||| ||||||||||    
T  19649 taaaaggaaactgtttttgactttattataaattcattacacaatttcaatgcattaattattatataatttcttttttcatat 19732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 462 - 521
Target Start/End: Complemental strand, 233977 - 233918
Alignment:
Q  462 cataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaa 521  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| |||||||| |||||    
T  233977 cataaaaggaaactgcttttgactttattataaattaattacacaatttcaatgaattaa 233918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 489 - 535
Target Start/End: Complemental strand, 5136 - 5090
Alignment:
Q  489 ttatgaattaattacacattttcaatgtattaactactatataattt 535  Q
    |||| ||||||||||||| |||||||  |||||||||||||||||||    
T  5136 ttataaattaattacacaatttcaataaattaactactatataattt 5090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 74530 - 74632
Alignment:
Q  457 attaccataaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaa-ctactatataatttcctttttcatatcattaacc 555  Q
    ||||||||||||| ||  ||||||| | |||||||| ||||||||| ||| ||||| |  |||||  |||||||||||||  ||||||||||| |||| |    
T  74530 attaccataaaagaaatttgttttttaatttattatcaattaattatacaatttcactacattaatttactatataattttttttttcatatctttaatc 74629  T
Q  556 agt 558  Q
    |||    
T  74630 agt 74632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 14143 - 14196
Alignment:
Q  489 ttatgaattaattacacattttcaatgtattaactactatataatttccttttt 542  Q
    ||||| ||| |||||||| |||||||||| ||| ||||||| ||||||||||||    
T  14143 ttatggattgattacacaatttcaatgtaataaatactataaaatttccttttt 14196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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