View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17625_high_39 (Length: 285)
Name: NF17625_high_39
Description: NF17625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17625_high_39 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 63 - 267
Target Start/End: Original strand, 43061775 - 43061979
Alignment:
| Q |
63 |
ttctcgagaaccaaagtacacacttcatgatggtataacatgtttaacaatgaatgaataaacaaataacaaatttcatcgcaaatcattagaattacag |
162 |
Q |
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| T |
43061775 |
ttctcgagaaccaaagtacacactacatgatggtataacatgtttaacaatgaatgaataaacaaataaaaaatttcatcgcaaatcattagaattacag |
43061874 |
T |
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| Q |
163 |
aaaagaaatatttggtaactaaaataaaattctacgtatgcaaataccgtaggtagaacctagaacacaacattgcatttgtcgggcaaaacccgggtga |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
43061875 |
aaaagaaatatttggtaactaaaataaaattctacgtatgcaaataccgtaggtagaacctagaacacaacattgcatttttcgggcaaaacccgggtga |
43061974 |
T |
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| Q |
263 |
aggta |
267 |
Q |
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||||| |
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| T |
43061975 |
aggta |
43061979 |
T |
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