View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17625_low_42 (Length: 279)

Name: NF17625_low_42
Description: NF17625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17625_low_42
NF17625_low_42
[»] chr4 (13 HSPs)
chr4 (1-269)||(2796412-2796680)
chr4 (137-186)||(51383996-51384045)
chr4 (143-187)||(20119953-20119997)
chr4 (143-179)||(32369927-32369963)
chr4 (143-182)||(31277036-31277075)
chr4 (143-186)||(36768857-36768900)
chr4 (127-186)||(47040239-47040298)
chr4 (143-185)||(843150-843192)
chr4 (136-186)||(19262932-19262982)
chr4 (147-188)||(1386537-1386578)
chr4 (143-183)||(8457933-8457973)
chr4 (136-188)||(18783978-18784030)
chr4 (136-180)||(35212741-35212785)
[»] chr6 (10 HSPs)
chr6 (138-187)||(6284668-6284717)
chr6 (118-187)||(34625717-34625786)
chr6 (148-186)||(32577472-32577510)
chr6 (143-188)||(6294542-6294587)
chr6 (147-187)||(4012732-4012772)
chr6 (149-185)||(4945274-4945310)
chr6 (143-187)||(34598546-34598590)
chr6 (145-188)||(6074523-6074566)
chr6 (124-186)||(18262791-18262854)
chr6 (144-188)||(7564170-7564214)
[»] chr1 (8 HSPs)
chr1 (143-188)||(3451863-3451908)
chr1 (126-186)||(2445861-2445921)
chr1 (143-186)||(26462653-26462696)
chr1 (144-186)||(3148159-3148201)
chr1 (142-183)||(9656775-9656816)
chr1 (145-186)||(29127664-29127705)
chr1 (145-181)||(1118409-1118445)
chr1 (142-186)||(36251257-36251301)
[»] chr5 (8 HSPs)
chr5 (145-188)||(28322251-28322294)
chr5 (126-186)||(9878040-9878100)
chr5 (136-188)||(9895148-9895200)
chr5 (153-188)||(40141299-40141334)
chr5 (136-186)||(16274348-16274397)
chr5 (143-188)||(15086706-15086751)
chr5 (143-188)||(39828474-39828519)
chr5 (126-186)||(32444757-32444817)
[»] chr3 (9 HSPs)
chr3 (143-183)||(49636837-49636877)
chr3 (143-186)||(18268013-18268056)
chr3 (146-186)||(19323456-19323496)
chr3 (143-186)||(47542543-47542586)
chr3 (142-188)||(19730215-19730261)
chr3 (142-188)||(19750805-19750851)
chr3 (128-161)||(9791348-9791381)
chr3 (145-186)||(13725318-13725359)
chr3 (145-173)||(20980954-20980982)
[»] chr7 (11 HSPs)
chr7 (133-186)||(17285062-17285115)
chr7 (138-186)||(26993567-26993615)
chr7 (145-181)||(40826525-40826561)
chr7 (126-169)||(30177029-30177072)
chr7 (143-186)||(46179918-46179961)
chr7 (136-186)||(24401830-24401880)
chr7 (146-188)||(31837762-31837804)
chr7 (145-186)||(27012134-27012175)
chr7 (142-186)||(20204246-20204290)
chr7 (143-183)||(40688891-40688931)
chr7 (143-187)||(44172897-44172941)
[»] chr8 (11 HSPs)
chr8 (124-172)||(10170408-10170456)
chr8 (143-186)||(3066050-3066093)
chr8 (143-186)||(29096954-29096997)
chr8 (143-182)||(31551847-31551886)
chr8 (124-182)||(32145226-32145284)
chr8 (145-187)||(43806203-43806245)
chr8 (133-182)||(1979410-1979459)
chr8 (143-172)||(2517115-2517144)
chr8 (146-175)||(12969205-12969234)
chr8 (143-188)||(13342605-13342650)
chr8 (143-172)||(25799156-25799185)
[»] chr2 (10 HSPs)
chr2 (145-185)||(35198240-35198280)
chr2 (134-186)||(42205843-42205895)
chr2 (143-186)||(28341332-28341375)
chr2 (145-187)||(14667666-14667708)
chr2 (144-182)||(17427321-17427359)
chr2 (126-171)||(14268756-14268801)
chr2 (145-182)||(32102872-32102909)
chr2 (134-186)||(16630794-16630846)
chr2 (147-187)||(38738423-38738463)
chr2 (127-183)||(42043208-42043264)


Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 2796412 - 2796680
Alignment:
Q  1 taagcatctcaatctttaatttatcacactcttattattttattattatgttaactaaacaaatgttggtgttattatttggtttattcaaatatgaagc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2796412 taagcatctcaatctttaatttatcacactcttattattttattattatgttaactaaacaaatgttggtgttattatttggtttattcaaatatgaagc 2796511  T
Q  101 ctcaaaatggacccgaccatgaaattgacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgttgatttgattcgga 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2796512 ctcaaaatggacccgaccatgacattgacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgttaatttgattcgga 2796611  T
Q  201 caccgggacccgcctttgatcgaaagtgtcggtgctacacctcctttatagtagttattattcttctca 269  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2796612 caccgggacacgcctttgatcgaaagtgtcggtgctacacctcctttatagtagttattattcttctca 2796680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 51384045 - 51383996
Alignment:
Q  137 caccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    ||||||||| |||||| ||||||||| ||||||||| |||||||||||||    
T  51384045 caccattaacaatttgtgaaaatgaaataattgaatgtaatcacatgtgt 51383996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 20119953 - 20119997
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtgtt 187  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||||    
T  20119953 taataatttgagaaaatgaaataatttaatgtaatcacatgtgtt 20119997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 32369963 - 32369927
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatca 179  Q
    |||||||||||||||||||||||||||||| ||||||    
T  32369963 taataatttgagaaaatgaattaattgaatgtaatca 32369927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 182
Target Start/End: Complemental strand, 31277075 - 31277036
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacat 182  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  31277075 taataatttgagaaaatgaactaattgaatgtaatcacat 31277036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 36768900 - 36768857
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    ||||||||||||| ||| |||||||||||| |||||||||||||    
T  36768900 taataatttgagagaattaattaattgaatgtaatcacatgtgt 36768857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 47040298 - 47040239
Alignment:
Q  127 gacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    ||||| || |||||| | |||||||||||||||||||||| || || |||||||||||||    
T  47040298 gacacgtcgacaccaatgataatttgagaaaatgaattaactggatataatcacatgtgt 47040239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 843192 - 843150
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtg 185  Q
    ||||||||||||||||||||||| |||||  ||||||||||||    
T  843192 taataatttgagaaaatgaattatttgaacgtaatcacatgtg 843150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 19262982 - 19262932
Alignment:
Q  136 acaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    |||||| |||||||||||||| ||||  ||||||||| |||||||||||||    
T  19262982 acaccagtaataatttgagaagatgacataattgaatgtaatcacatgtgt 19262932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 188
Target Start/End: Complemental strand, 1386578 - 1386537
Alignment:
Q  147 aatttgagaaaatgaattaattgaatttaatcacatgtgttg 188  Q
    ||||||||||||  |||||||||||| |||||||||||||||    
T  1386578 aatttgagaaaagtaattaattgaatataatcacatgtgttg 1386537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 8457933 - 8457973
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatg 183  Q
    |||||||||||||||||||  ||||||||| ||||||||||    
T  8457933 taataatttgagaaaatgacataattgaatgtaatcacatg 8457973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 18783978 - 18784030
Alignment:
Q  136 acaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgttg 188  Q
    |||| ||| |||||||||||||||||| ||||||||| |||| ||| ||||||    
T  18783978 acacaattcataatttgagaaaatgaagtaattgaatgtaattacacgtgttg 18784030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 35212785 - 35212741
Alignment:
Q  136 acaccattaataatttgagaaaatgaattaattgaatttaatcac 180  Q
    |||||| ||||||||||||||||| || ||||||||| |||||||    
T  35212785 acaccaataataatttgagaaaattaaataattgaatgtaatcac 35212741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 6284717 - 6284668
Alignment:
Q  138 accattaataatttgagaaaatgaattaattgaatttaatcacatgtgtt 187  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  6284717 accattaataatttgagaaaatgacataattgaatttaatcacatgtgtt 6284668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 34625717 - 34625786
Alignment:
Q  118 catgaaattgacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgtt 187  Q
    ||||||||||| || || |||||  |||||||||||||||||||||||||||||| ||||||||| ||||    
T  34625717 catgaaattgatacatcgacaccgataataatttgagaaaatgaattaattgaatgtaatcacatatgtt 34625786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 186
Target Start/End: Complemental strand, 32577510 - 32577472
Alignment:
Q  148 atttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  32577510 atttgagaaaatgaattaattgaatgtaatcacatgtgt 32577472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 6294587 - 6294542
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtgttg 188  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||    
T  6294587 taataatttgagaaaatgaattaattgaatgcaatcgcatgtgttg 6294542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 4012732 - 4012772
Alignment:
Q  147 aatttgagaaaatgaattaattgaatttaatcacatgtgtt 187  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  4012732 aatttgaaaaaatgaattaattgaatataatcacatgtgtt 4012772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 4945274 - 4945310
Alignment:
Q  149 tttgagaaaatgaattaattgaatttaatcacatgtg 185  Q
    |||||||||||||||||||||||| ||||||||||||    
T  4945274 tttgagaaaatgaattaattgaatgtaatcacatgtg 4945310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 34598546 - 34598590
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtgtt 187  Q
    ||||||||||||||||||||||||||| || ||||||||| ||||    
T  34598546 taataatttgagaaaatgaattaattggatgtaatcacatatgtt 34598590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 6074523 - 6074566
Alignment:
Q  145 ataatttgagaaaatgaattaattgaatttaatcacatgtgttg 188  Q
    ||||||||||||||||||||| |||||  |||||||||||||||    
T  6074523 ataatttgagaaaatgaattagttgaacgtaatcacatgtgttg 6074566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 18262854 - 18262791
Alignment:
Q  124 attgacacttcaacaccattaataatttgagaaaat-gaattaattgaatttaatcacatgtgt 186  Q
    |||||||  ||||||||| ||||||||||| ||||| ||||||||||||  |||||||||||||    
T  18262854 attgacatatcaacaccaataataatttgataaaattgaattaattgaaagtaatcacatgtgt 18262791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 7564214 - 7564170
Alignment:
Q  144 aataatttgagaaaatgaattaattgaatttaatcacatgtgttg 188  Q
    |||||||||||||||| |||||||||||| |||||| | ||||||    
T  7564214 aataatttgagaaaataaattaattgaatgtaatcatacgtgttg 7564170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 3451863 - 3451908
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtgttg 188  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  3451863 taataatttgagaaaacgaattaattgaatttaatcacatgtgttg 3451908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 2445861 - 2445921
Alignment:
Q  126 tgacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    |||||||||||||||| | |||||||||||||||||  ||||| |||||||||| ||||||    
T  2445861 tgacacttcaacaccaatgataatttgagaaaatgacataattcaatttaatcatatgtgt 2445921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 26462696 - 26462653
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||    
T  26462696 taataatttaagaaaatgaaataattgaatgtaatcacatgtgt 26462653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 3148159 - 3148201
Alignment:
Q  144 aataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    |||||||||||||||| |||||||| ||| |||||||||||||    
T  3148159 aataatttgagaaaataaattaatttaatataatcacatgtgt 3148201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 9656816 - 9656775
Alignment:
Q  142 ttaataatttgagaaaatgaattaattgaatttaatcacatg 183  Q
    |||||||||||| ||||||| |||||||||| ||||||||||    
T  9656816 ttaataatttgaaaaaatgatttaattgaatgtaatcacatg 9656775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 29127664 - 29127705
Alignment:
Q  145 ataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    ||||||||||||||||| |||||||||| |||||| ||||||    
T  29127664 ataatttgagaaaatgagttaattgaatgtaatcaaatgtgt 29127705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 1118445 - 1118409
Alignment:
Q  145 ataatttgagaaaatgaattaattgaatttaatcaca 181  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  1118445 ataatttgaaaaaatgaattaattgaatgtaatcaca 1118409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 36251301 - 36251257
Alignment:
Q  142 ttaataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    ||||||||||||||||||||| |||| |||| |||| ||||||||    
T  36251301 ttaataatttgagaaaatgaactaatagaatgtaataacatgtgt 36251257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 28322251 - 28322294
Alignment:
Q  145 ataatttgagaaaatgaattaattgaatttaatcacatgtgttg 188  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  28322251 ataatttgagaaaatgaattaattgaatgtaatcacatgtgttg 28322294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 9878100 - 9878040
Alignment:
Q  126 tgacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    |||||| || |||||| |||||||||||||| ||||||||||||||| ||||||| |||||    
T  9878100 tgacacgtcgacaccaataataatttgagaatatgaattaattgaatgtaatcacttgtgt 9878040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 9895148 - 9895200
Alignment:
Q  136 acaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgttg 188  Q
    |||||| ||||||||||||||||| ||||| |||||  |||||||||||||||    
T  9895148 acaccagtaataatttgagaaaataaattatttgaacgtaatcacatgtgttg 9895200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 188
Target Start/End: Original strand, 40141299 - 40141334
Alignment:
Q  153 agaaaatgaattaattgaatttaatcacatgtgttg 188  Q
    |||||||||||||||||||||||| |||||||||||    
T  40141299 agaaaatgaattaattgaatttaaccacatgtgttg 40141334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 16274397 - 16274348
Alignment:
Q  136 acaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    |||||| ||| ||||||||||| |||||||||||||| |||||||||||||    
T  16274397 acaccagtaaaaatttgagaaa-tgaattaattgaatgtaatcacatgtgt 16274348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 15086706 - 15086751
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtgttg 188  Q
    ||||||||||||||| ||||||| |||||  |||||||||||||||    
T  15086706 taataatttgagaaagtgaattatttgaacgtaatcacatgtgttg 15086751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 39828474 - 39828519
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtgttg 188  Q
    |||||||||||||| ||||| ||||||||| ||| |||||||||||    
T  39828474 taataatttgagaatatgaaataattgaatgtaaccacatgtgttg 39828519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 32444757 - 32444817
Alignment:
Q  126 tgacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    |||||| ||||||||||||| |||||||||| ||||  ||||| ||| |||||| ||||||    
T  32444757 tgacacgtcaacaccattaacaatttgagaagatgacataattcaatgtaatcaaatgtgt 32444817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000006; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 49636877 - 49636837
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatg 183  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  49636877 taataatttgagaaaatgaattaattgaatgtaatcacatg 49636837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 18268056 - 18268013
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    |||||||||||||||||||||||||||||  |||||||||||||    
T  18268056 taataatttgagaaaatgaattaattgaacgtaatcacatgtgt 18268013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 19323496 - 19323456
Alignment:
Q  146 taatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  19323496 taatttgagaaaatgacataattgaatttaatcacatgtgt 19323456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 47542543 - 47542586
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    |||||||||||||||||||| || |||||| |||||||||||||    
T  47542543 taataatttgagaaaatgaactatttgaatgtaatcacatgtgt 47542586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 19730261 - 19730215
Alignment:
Q  142 ttaataatttgagaaaatgaattaattgaatttaatcacatgtgttg 188  Q
    ||||||||||||||||||||  ||||||||| | |||||||||||||    
T  19730261 ttaataatttgagaaaatgacataattgaatgtgatcacatgtgttg 19730215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 19750851 - 19750805
Alignment:
Q  142 ttaataatttgagaaaatgaattaattgaatttaatcacatgtgttg 188  Q
    ||||||||||||||||||||  ||||||||| | |||||||||||||    
T  19750851 ttaataatttgagaaaatgacataattgaatgtgatcacatgtgttg 19750805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 161
Target Start/End: Original strand, 9791348 - 9791381
Alignment:
Q  128 acacttcaacaccattaataatttgagaaaatga 161  Q
    |||||| |||||||||||||||||||||||||||    
T  9791348 acactttaacaccattaataatttgagaaaatga 9791381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 13725318 - 13725359
Alignment:
Q  145 ataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    ||||| ||||||||||||||||||||||  ||||||||||||    
T  13725318 ataatatgagaaaatgaattaattgaatgaaatcacatgtgt 13725359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 173
Target Start/End: Complemental strand, 20980982 - 20980954
Alignment:
Q  145 ataatttgagaaaatgaattaattgaatt 173  Q
    |||||||||||||||||||||||||||||    
T  20980982 ataatttgagaaaatgaattaattgaatt 20980954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 17285062 - 17285115
Alignment:
Q  133 tcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    ||||||||| ||||||||||||| |||||  ||||| |||||||||||||||||    
T  17285062 tcaacaccaataataatttgagagaatgatataattcaatttaatcacatgtgt 17285115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 26993615 - 26993567
Alignment:
Q  138 accattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    ||||||||||||||||||||||||| ||| |||||  ||||||||||||    
T  26993615 accattaataatttgagaaaatgaagtaactgaatgcaatcacatgtgt 26993567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 40826525 - 40826561
Alignment:
Q  145 ataatttgagaaaatgaattaattgaatttaatcaca 181  Q
    |||||||||||||||||||||||||||| ||||||||    
T  40826525 ataatttgagaaaatgaattaattgaatataatcaca 40826561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 30177072 - 30177029
Alignment:
Q  126 tgacacttcaacaccattaataatttgagaaaatgaattaattg 169  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||    
T  30177072 tgacacgtcaacaccagtaataatttgagaaaatgaagtaattg 30177029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 46179961 - 46179918
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    |||||| |||||||||| |||||||||||| |||||||||||||    
T  46179961 taataagttgagaaaataaattaattgaatataatcacatgtgt 46179918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 24401830 - 24401880
Alignment:
Q  136 acaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    |||||| ||| | |||||||||||| ||||||||||| |||||||||||||    
T  24401830 acaccagtaaaattttgagaaaatggattaattgaatgtaatcacatgtgt 24401880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 31837762 - 31837804
Alignment:
Q  146 taatttgagaaaatgaattaattgaatttaatcacatgtgttg 188  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||    
T  31837762 taatttgagaaaatgaaataattgaatgtaatctcatgtgttg 31837804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 27012134 - 27012175
Alignment:
Q  145 ataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    |||||||||||||||||||||||| ||| || ||||||||||    
T  27012134 ataatttgagaaaatgaattaattaaatgtattcacatgtgt 27012175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 20204246 - 20204290
Alignment:
Q  142 ttaataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    |||||||||||||||||||||| | |||||  |||||||||||||    
T  20204246 ttaataatttgagaaaatgaatcatttgaacgtaatcacatgtgt 20204290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 40688891 - 40688931
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatg 183  Q
    ||||||||||| |||||||||||||| ||| ||||||||||    
T  40688891 taataatttgataaaatgaattaattaaatgtaatcacatg 40688931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 44172941 - 44172897
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtgtt 187  Q
    |||||||||||||||||||  ||||| ||| ||||||||||||||    
T  44172941 taataatttgagaaaatgacataattcaatgtaatcacatgtgtt 44172897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 10170456 - 10170408
Alignment:
Q  124 attgacacttcaacaccattaataatttgagaaaatgaattaattgaat 172  Q
    |||| ||| ||||||||| ||||||||||||||||| ||||||||||||    
T  10170456 attggcacgtcaacaccaataataatttgagaaaataaattaattgaat 10170408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 3066050 - 3066093
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||    
T  3066050 taataatttgagaaaatggattaattgaatgtaataacatgtgt 3066093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 29096954 - 29096997
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||    
T  29096954 taataatttaagaaaataaattaattgaatgtaatcacatgtgt 29096997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 182
Target Start/End: Complemental strand, 31551886 - 31551847
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacat 182  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  31551886 taataatttgagaaaatgaataaattgaatataatcacat 31551847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 32145226 - 32145284
Alignment:
Q  124 attgacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacat 182  Q
    |||||||||| ||||||| |||||||||||||||||| | ||||| ||  |||||||||    
T  32145226 attgacactttaacaccagtaataatttgagaaaatggaataattaaacgtaatcacat 32145284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 43806245 - 43806203
Alignment:
Q  145 ataatttgagaaaatgaattaattgaatttaatcacatgtgtt 187  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||    
T  43806245 ataatttaagaaaatgaattaattgaatataatcacatatgtt 43806203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 1979410 - 1979459
Alignment:
Q  133 tcaacaccattaataatttgagaaaatgaattaattgaatttaatcacat 182  Q
    ||||||||  ||||||||||||||||| |||||||| ||| |||||||||    
T  1979410 tcaacaccggtaataatttgagaaaattaattaattaaatgtaatcacat 1979459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 172
Target Start/End: Original strand, 2517115 - 2517144
Alignment:
Q  143 taataatttgagaaaatgaattaattgaat 172  Q
    ||||||||||||||||||||||||||||||    
T  2517115 taataatttgagaaaatgaattaattgaat 2517144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 175
Target Start/End: Original strand, 12969205 - 12969234
Alignment:
Q  146 taatttgagaaaatgaattaattgaattta 175  Q
    ||||||||||||||||||||||||||||||    
T  12969205 taatttgagaaaatgaattaattgaattta 12969234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 13342605 - 13342650
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtgttg 188  Q
    ||||||||||| |||||||| ||||| |||| ||||||||||||||    
T  13342605 taataatttgataaaatgaaataattaaattcaatcacatgtgttg 13342650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 172
Target Start/End: Original strand, 25799156 - 25799185
Alignment:
Q  143 taataatttgagaaaatgaattaattgaat 172  Q
    ||||||||||||||||||||||||||||||    
T  25799156 taataatttgagaaaatgaattaattgaat 25799185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 35198280 - 35198240
Alignment:
Q  145 ataatttgagaaaatgaattaattgaatttaatcacatgtg 185  Q
    ||||||| |||||||||||||||||||| ||||||||||||    
T  35198280 ataatttaagaaaatgaattaattgaatgtaatcacatgtg 35198240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 42205895 - 42205843
Alignment:
Q  134 caacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    |||||||| ||||||||||||||||||| |||||||||  |||||| ||||||    
T  42205895 caacaccaataataatttgagaaaatgacttaattgaaaataatcatatgtgt 42205843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 28341332 - 28341375
Alignment:
Q  143 taataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||    
T  28341332 taatagtttgagaaaatgaattaattaaatgtaatcacatgtgt 28341375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 14667666 - 14667708
Alignment:
Q  145 ataatttgagaaaatgaattaattgaatttaatcacatgtgtt 187  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||    
T  14667666 ataatttgagaaaatgaactaattgaatataatcacatatgtt 14667708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 17427359 - 17427321
Alignment:
Q  144 aataatttgagaaaatgaattaattgaatttaatcacat 182  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  17427359 aataatttgagaaaatgaattaattgaaggtaatcacat 17427321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 14268801 - 14268756
Alignment:
Q  126 tgacacttcaacaccattaataatttgagaaaatgaattaattgaa 171  Q
    |||||| ||||||||  ||||||||||||||||||| |||||||||    
T  14268801 tgacacgtcaacaccggtaataatttgagaaaatgacttaattgaa 14268756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 32102909 - 32102872
Alignment:
Q  145 ataatttgagaaaatgaattaattgaatttaatcacat 182  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  32102909 ataatttgagaaaataaattaattgaatataatcacat 32102872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 16630794 - 16630846
Alignment:
Q  134 caacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 186  Q
    |||||||  ||||||||| |||||||||  ||||| |||||||||||||||||    
T  16630794 caacaccgataataatttaagaaaatgacataattcaatttaatcacatgtgt 16630846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 38738423 - 38738463
Alignment:
Q  147 aatttgagaaaatgaattaattgaatttaatcacatgtgtt 187  Q
    ||||||||||||| |||||||| ||| ||||||||||||||    
T  38738423 aatttgagaaaattaattaattaaatgtaatcacatgtgtt 38738463  T

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Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 42043264 - 42043208
Alignment:
Q  127 gacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatg 183  Q
    ||||| ||||||||  ||||||||| | |||||||||||||||||| |||| |||||    
T  42043264 gacacatcaacaccgataataatttaataaaatgaattaattgaatgtaataacatg 42043208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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