View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17625_low_61 (Length: 204)
Name: NF17625_low_61
Description: NF17625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17625_low_61 |
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Alignment Details
Target: chr3 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 2601445 - 2601624
Alignment:
| Q |
13 |
cagagaaagtgacgaggacaatg----ttagtagaaaaattggtgcaccgtcatatatcaaaccttctcctcttccattgtttttcattcccacacctcc |
108 |
Q |
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| T |
2601445 |
cagagaaagtgacgaggacaatgcatgttagtagaaaaattggtgcactgtcatatatcaaaccttctcctcttccattgtttttcattcccacacctcc |
2601544 |
T |
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| Q |
109 |
ttaatcatgtttagtaccccctcccccaatttttcaacatcccaccccgtgaatggtgctccgtaccccaatctatgcat |
188 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |
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| T |
2601545 |
ttaatcatgtttagtaccccctcccccaatttttcaacatcccaccccatgaatggtgctccgtaccacaatctatgcat |
2601624 |
T |
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