View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17629_high_15 (Length: 277)
Name: NF17629_high_15
Description: NF17629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17629_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 9 - 262
Target Start/End: Original strand, 39531185 - 39531438
Alignment:
| Q |
9 |
gattattcttgttgttgacaggatatcctgtggtagttggagctctaattttggcttcttcatcatagttgttgatggtgaggctcttttggctaaggat |
108 |
Q |
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| T |
39531185 |
gattcttcttgttgttgacaggatatcctgtagtagttggagctctaattttggcttcttcatcatagttgttgatggtgaggctcttttggctaaggat |
39531284 |
T |
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| Q |
109 |
tgggaaaagtgaagcatttgctatgaatatgttggataaaagaaaccatagaagaagaggtcttaggattttaggagtcataatgaattgaaacaaatac |
208 |
Q |
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| T |
39531285 |
tgggaaaagtgaagcatttgctatgaatatgttggataaaagaaaccatagaagaagaggtcttaggattttaggagtcataatgaattgaaacaaatac |
39531384 |
T |
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| Q |
209 |
ttaatttgtgatgatttttgcaatatggattgtggtgtgtgatgaagtcattat |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39531385 |
ttaatttgtgatgatttttgcaatatggattgtggtgtgtgatgaagtcattat |
39531438 |
T |
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