View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17629_low_23 (Length: 227)
Name: NF17629_low_23
Description: NF17629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17629_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 45678650 - 45678562
Alignment:
| Q |
123 |
acgtgtatgttctaatccttggagtatgttgcaattgattgattaagtggtcacagtggctacaaatctaaacgagtaatacttgcttg |
211 |
Q |
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| T |
45678650 |
acgtgtatgttctgatccttggagtatgttgcaattgattgattaagtggtcacagtggctacaaatctaaacgagtaatacttgcttg |
45678562 |
T |
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Target: chr7; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 45678726 - 45678641
Alignment:
| Q |
17 |
agacagactcgaaagagttatgttcatctgaatgggacaagtacaacaacgtaaataggatatatacgtacatatgacgtggatgt |
102 |
Q |
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| T |
45678726 |
agacagactcgaaagagttatgttcatctgaatgggacaagtacaacaacgtaaataggatatatacgtacatatgacgtgtatgt |
45678641 |
T |
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