View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1762_low_9 (Length: 344)
Name: NF1762_low_9
Description: NF1762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1762_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 146; Significance: 7e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 48080341 - 48080188
Alignment:
| Q |
14 |
atttccttgggttgtaatatgttagtcttcacaaaatcctttgtttttctaagaacgcaaaaagcctgaaaggttaaaagaacattttttcaatatacac |
113 |
Q |
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| T |
48080341 |
atttccttgggttgtaatatgttagtcttcacaaaatcctttgtttttctaagaacgcaaaaagcctaaaaggttaaaagaacattttttcaatatacac |
48080242 |
T |
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| Q |
114 |
tacatatcctgaccacactttctttccttttccacactcaacaccatttggtaa |
167 |
Q |
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| T |
48080241 |
tacatatcctgaccacactttctttccttttccactctcaacaccatttggtaa |
48080188 |
T |
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