View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17631_low_5 (Length: 322)
Name: NF17631_low_5
Description: NF17631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17631_low_5 |
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Alignment Details
Target: chr6 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 30737617 - 30737934
Alignment:
| Q |
1 |
aagatccttcactcagatatcagattcctccacttcagcatagagaaagactctatttaagtgtgtcaaatttgcatcaagaaataccttcttgataaat |
100 |
Q |
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||||||||||||||| |||||||| || ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
30737617 |
aagatccttcactcatatatcagactcgtccacttcagcatagagaaagcctctatttaagtgtgtcaaatttacatcaagaaataccttcttgataaat |
30737716 |
T |
|
| Q |
101 |
gcacaaacttgttgagattactacgtactcaatacaaaggaaaaatttccttttcaaaataaaaaaccctacaaaatttgtaggtactactccttccaat |
200 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30737717 |
gcagaaacttgttgagattactacgtactcaatacaaaggaaaaatttcctcttcaaaataaaaaaccctacaaaatttgtaggtactactccttccaat |
30737816 |
T |
|
| Q |
201 |
atggaaactctggttacatttcgagcctgatcctctcttgttataataacctggataaaatgatctttgaaaatccacttcttcaattaacttcaatccc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30737817 |
atggaaactctggttacatttcgagcctgatcctctcttgttataataacctggataaaatgatctttgaaaatccacttcttcaattaacttcaatccc |
30737916 |
T |
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| Q |
301 |
acatattcttcgacatcc |
318 |
Q |
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|||| |||| ||| |||| |
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| T |
30737917 |
acattttctgcgagatcc |
30737934 |
T |
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