View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17632_low_10 (Length: 387)

Name: NF17632_low_10
Description: NF17632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17632_low_10
NF17632_low_10
[»] chr6 (18 HSPs)
chr6 (1-387)||(11525573-11525959)
chr6 (8-140)||(7586119-7586251)
chr6 (9-140)||(19289243-19289375)
chr6 (43-140)||(21128282-21128379)
chr6 (40-140)||(11235700-11235800)
chr6 (13-140)||(18498821-18498949)
chr6 (9-140)||(31931624-31931756)
chr6 (9-140)||(11206147-11206279)
chr6 (9-140)||(12952993-12953125)
chr6 (58-140)||(18555471-18555553)
chr6 (14-136)||(20635779-20635902)
chr6 (9-136)||(17608268-17608397)
chr6 (60-140)||(25675362-25675443)
chr6 (60-135)||(9933585-9933660)
chr6 (99-140)||(25518891-25518932)
chr6 (60-140)||(25679438-25679519)
chr6 (60-140)||(25735472-25735553)
chr6 (9-136)||(22386862-22386990)
[»] chr3 (15 HSPs)
chr3 (4-140)||(51988991-51989127)
chr3 (8-141)||(17022081-17022214)
chr3 (9-140)||(31113839-31113970)
chr3 (8-141)||(22151300-22151434)
chr3 (8-140)||(41045798-41045931)
chr3 (8-141)||(13148320-13148454)
chr3 (184-336)||(32021176-32021328)
chr3 (14-141)||(10529400-10529526)
chr3 (9-140)||(21736361-21736493)
chr3 (57-140)||(2246618-2246701)
chr3 (60-130)||(27173092-27173162)
chr3 (58-129)||(15650972-15651043)
chr3 (57-140)||(13199143-13199226)
chr3 (58-129)||(15662607-15662678)
chr3 (9-136)||(15833463-15833591)
[»] chr1 (23 HSPs)
chr1 (4-140)||(23065004-23065140)
chr1 (1-136)||(19038066-19038201)
chr1 (1-140)||(44201067-44201206)
chr1 (1-140)||(5929758-5929897)
chr1 (9-130)||(28474292-28474413)
chr1 (8-130)||(22019401-22019524)
chr1 (8-140)||(45070547-45070680)
chr1 (8-140)||(52350578-52350711)
chr1 (8-136)||(22642954-22643083)
chr1 (8-136)||(22655536-22655665)
chr1 (8-141)||(28380048-28380181)
chr1 (8-135)||(26548149-26548277)
chr1 (47-141)||(20251827-20251921)
chr1 (9-140)||(46180774-46180906)
chr1 (9-132)||(20799127-20799250)
chr1 (58-140)||(23927113-23927195)
chr1 (95-140)||(22609956-22610001)
chr1 (4-52)||(20255209-20255257)
chr1 (9-136)||(21544088-21544216)
chr1 (60-135)||(18310918-18310993)
chr1 (99-140)||(675626-675667)
chr1 (99-135)||(14388111-14388147)
chr1 (9-136)||(17371101-17371229)
[»] scaffold0005 (1 HSPs)
scaffold0005 (4-140)||(61277-61413)
[»] chr4 (12 HSPs)
chr4 (4-140)||(14778317-14778453)
chr4 (8-141)||(36209987-36210120)
chr4 (9-130)||(18006939-18007061)
chr4 (8-140)||(17993671-17993804)
chr4 (57-130)||(19244058-19244131)
chr4 (46-140)||(14710695-14710789)
chr4 (9-140)||(18774534-18774666)
chr4 (9-124)||(8997136-8997251)
chr4 (9-140)||(16819230-16819363)
chr4 (8-136)||(33378465-33378594)
chr4 (58-140)||(23509387-23509469)
chr4 (99-140)||(55651594-55651635)
[»] chr7 (12 HSPs)
chr7 (4-140)||(8998861-8998997)
chr7 (8-141)||(13174536-13174669)
chr7 (8-140)||(11086976-11087108)
chr7 (184-336)||(30220778-30220930)
chr7 (9-130)||(24882352-24882474)
chr7 (57-140)||(29590229-29590312)
chr7 (57-135)||(13682562-13682640)
chr7 (87-135)||(3476351-3476399)
chr7 (99-140)||(26209571-26209612)
chr7 (60-135)||(8933762-8933837)
chr7 (99-135)||(12734189-12734225)
chr7 (99-135)||(48382388-48382424)
[»] chr2 (14 HSPs)
chr2 (4-140)||(21025393-21025529)
chr2 (9-130)||(20646478-20646600)
chr2 (40-140)||(19299912-19300012)
chr2 (40-140)||(19312919-19313019)
chr2 (8-130)||(24814500-24814623)
chr2 (87-140)||(19497940-19497993)
chr2 (40-140)||(19356546-19356647)
chr2 (8-130)||(24793925-24794048)
chr2 (99-140)||(967464-967505)
chr2 (99-140)||(24275252-24275293)
chr2 (99-140)||(17969170-17969211)
chr2 (60-140)||(22763881-22763962)
chr2 (60-140)||(22774585-22774666)
chr2 (60-140)||(22779963-22780044)
[»] chr8 (16 HSPs)
chr8 (9-140)||(23271091-23271222)
chr8 (9-140)||(19461211-19461343)
chr8 (9-140)||(19558889-19559021)
chr8 (9-140)||(7018268-7018399)
chr8 (8-141)||(8032080-8032213)
chr8 (9-140)||(22166910-22167041)
chr8 (9-132)||(22135745-22135868)
chr8 (8-130)||(29379636-29379759)
chr8 (8-118)||(17519028-17519139)
chr8 (14-130)||(28903516-28903633)
chr8 (60-141)||(40003276-40003358)
chr8 (99-140)||(3843785-3843826)
chr8 (99-140)||(20259594-20259635)
chr8 (99-140)||(21046224-21046265)
chr8 (99-140)||(22211365-22211406)
chr8 (87-140)||(23370811-23370864)
[»] chr5 (13 HSPs)
chr5 (8-140)||(13405168-13405300)
chr5 (8-141)||(20215069-20215202)
chr5 (8-141)||(40228709-40228842)
chr5 (9-140)||(20168036-20168168)
chr5 (8-141)||(40032723-40032856)
chr5 (9-140)||(13533968-13534100)
chr5 (9-140)||(36095622-36095754)
chr5 (9-140)||(36097079-36097211)
chr5 (8-141)||(1915468-1915601)
chr5 (9-128)||(35543098-35543218)
chr5 (184-336)||(17628959-17629111)
chr5 (9-130)||(13523251-13523373)
chr5 (99-140)||(20416964-20417005)
[»] scaffold0017 (2 HSPs)
scaffold0017 (9-128)||(40237-40356)
scaffold0017 (9-128)||(58783-58902)
[»] scaffold0254 (1 HSPs)
scaffold0254 (9-130)||(22106-22227)
[»] scaffold0012 (2 HSPs)
scaffold0012 (9-128)||(7542-7661)
scaffold0012 (99-140)||(127879-127920)
[»] scaffold0010 (2 HSPs)
scaffold0010 (8-141)||(61787-61920)
scaffold0010 (8-96)||(117378-117466)
[»] scaffold0280 (1 HSPs)
scaffold0280 (9-141)||(17730-17862)
[»] scaffold0185 (1 HSPs)
scaffold0185 (9-141)||(9351-9483)
[»] scaffold0073 (1 HSPs)
scaffold0073 (9-140)||(58534-58666)
[»] scaffold0090 (2 HSPs)
scaffold0090 (40-140)||(879-979)
scaffold0090 (40-140)||(5259-5359)
[»] scaffold0655 (1 HSPs)
scaffold0655 (8-142)||(5171-5306)
[»] scaffold0007 (1 HSPs)
scaffold0007 (9-124)||(59183-59299)
[»] scaffold0002 (2 HSPs)
scaffold0002 (8-130)||(481692-481815)
scaffold0002 (8-141)||(156548-156682)
[»] scaffold0547 (1 HSPs)
scaffold0547 (9-140)||(951-1084)
[»] scaffold0752 (1 HSPs)
scaffold0752 (9-140)||(2053-2185)
[»] scaffold0018 (1 HSPs)
scaffold0018 (8-130)||(6444-6567)
[»] scaffold0774 (1 HSPs)
scaffold0774 (58-140)||(6305-6387)
[»] scaffold1321 (1 HSPs)
scaffold1321 (8-130)||(857-980)
[»] scaffold1263 (1 HSPs)
scaffold1263 (8-130)||(1050-1173)
[»] scaffold0154 (1 HSPs)
scaffold0154 (62-140)||(35770-35848)
[»] scaffold0481 (1 HSPs)
scaffold0481 (57-130)||(12765-12838)
[»] scaffold0422 (1 HSPs)
scaffold0422 (9-136)||(11820-11949)
[»] scaffold0040 (1 HSPs)
scaffold0040 (59-130)||(69840-69911)
[»] scaffold0001 (1 HSPs)
scaffold0001 (95-130)||(28774-28809)
[»] scaffold0544 (1 HSPs)
scaffold0544 (40-113)||(9826-9899)
[»] scaffold0410 (1 HSPs)
scaffold0410 (99-140)||(15962-16003)
[»] scaffold0163 (1 HSPs)
scaffold0163 (60-140)||(29708-29788)
[»] scaffold0739 (1 HSPs)
scaffold0739 (87-126)||(2241-2280)
[»] scaffold0201 (1 HSPs)
scaffold0201 (60-135)||(7469-7544)
[»] scaffold0604 (1 HSPs)
scaffold0604 (62-118)||(1-57)
[»] scaffold0063 (1 HSPs)
scaffold0063 (57-121)||(15119-15183)


Alignment Details
Target: chr6 (Bit Score: 367; Significance: 0; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 11525573 - 11525959
Alignment:
Q  1 aatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgcca 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  11525573 aatctacaagttgatcagaagattcaacctgaagactctaagagctgtctattggatttaacctcgtctaagagagcgaaagactcaaaggaaggtgcca 11525672  T
Q  101 acgttcatttgaaaagcactgggtgcttgtacttcattgagtagcatcaaagaagattttagtattttggaagacaattcaacttggcttcttggaaatg 200  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11525673 acgttcatttgaaaagcactgggtgcttgtccttcattgagtagcatcaaagaagattttagtattttggaagacaattcaacttggcttcttggaaatg 11525772  T
Q  201 gtgaaaagattaatttctggaatgatagttggtgtggtgcccccctctctcaggccttgaatatccctcaagcaatctcatctcatctttcctctactgt 300  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11525773 gtgaaaagattaatttctggaatgatagctggtgtggtgcccccctctctcaggccttgaatatccctcaagcaatctcatctcatctttcctctactgt 11525872  T
Q  301 tagtgattacattgttaatggtgagtggagtattccagctgatttaactcatatgtttcaatctcttaggcaactcgttcaacaagc 387  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11525873 tagtgattacattgttaatggtgagtggagtattccagctgatttaactcatatgtttcaatctcttaggcaactcgttcaacaagc 11525959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 7586119 - 7586251
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    |||||| |||| |||||||||||||||  || || ||||||||| || ||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  7586119 aagttgttcaggagattcaacctgaagtttcaaatagctgtctagtggatttaacctcgtctaagagagcgaaagactaaaaggaaggtgccaacgttca 7586218  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||||||| |||||||||    
T  7586219 tttgaaaagcactgggtgcttgtccttcattga 7586251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 19289243 - 19289375
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||| ||||||||| ||| ||   ||||| |||||||||||||||    
T  19289243 agttgatcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgcctaagagagcgaaggatcaaaagggaggtgccaacgttca 19289342  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||||||| |||||||||    
T  19289343 tttgaaaagcactgggtgcttgtccttcattga 19289375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 21128379 - 21128282
Alignment:
Q  43 agctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    |||||||||||| ||| |||||||||||||| || |||||||| || | |||||| |||||||||||||||||||||||||||||||| |||||||||    
T  21128379 agctgtctattggattcaacctcgtctaagaaagcgaaagactaaaggaaaggtggcaacgttcatttgaaaagcactgggtgcttgtccttcattga 21128282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 11235800 - 11235700
Alignment:
Q  40 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattg 139  Q
    ||||||||||| || || | ||||||||||||||||| ||| ||   ||||| | || ||||||||||||||||||||||||||||||||| ||||||||    
T  11235800 aagagctgtctcttaaagtaaacctcgtctaagagagcgaaggatcaaaagggaagttccaacgttcatttgaaaagcactgggtgcttgtccttcattg 11235701  T
Q  140 a 140  Q
    |    
T  11235700 a 11235700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 18498949 - 18498821
Alignment:
Q  13 gatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttg 111  Q
    ||||||||||||||| |||||  ||| || ||||||  | || || ||||||||||||||||||| ||| ||   ||||||| ||| |||||||||||||    
T  18498949 gatcagaagattcaatctgaaatctcaaaagagctgaatcttaaagttaacctcgtctaagagagcgaaggatcaaaaggaaagtgacaacgttcatttg 18498850  T
Q  112 aaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||| ||| |||||||    
T  18498849 aaaagcactgggtgcttatacatcattga 18498821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 31931756 - 31931624
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||| ||| |  ||| || ||||||| |  | || ||||||||||||||||||||||| ||   ||||| | |||| ||||||||    
T  31931756 agttgatcagaagattcaatctggaatctcaaaagagctgtttcattaagttaacctcgtctaagagagagaaggatcaaaagggaagtgcgaacgttca 31931657  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||||||| | |||||||    
T  31931656 tttgaaaagcactgggtgcttgtccctcattga 31931624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 11206279 - 11206147
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||| ||||||||| |||||  ||| || ||| ||||| || || | ||||||||||||||||| ||| ||   ||||| | |||||||||||||    
T  11206279 agttgatcaaaagattcaatctgaaatctcaaaagagttgtctcttaaagtaaacctcgtctaagagagcgaatgatcaaaagggaagtgccaacgttca 11206180  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||| ||||||||||| | |||||||    
T  11206179 tttgaaaagcattgggtgcttgtccatcattga 11206147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 12952993 - 12953125
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaaga-ctcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||| |||||  ||| ||||||||  | || |  |||||||||||||| |||| ||| || |  |||||   |||||||||||||    
T  12952993 agttgatcagaagattcaatctgaaacctcaaagagctgattctttacgttaacctcgtctaaaagagcgaaggatcaaaaaggggagtgccaacgttca 12953092  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||| ||||||||||| |||||||    
T  12953093 tttgaaaagcactaggtgcttgtacctcattga 12953125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 18555553 - 18555471
Alignment:
Q  58 ttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    |||||||||||||| |||| ||| ||   |||||   |||||||||||||||||||||||||||||||||||||| |||||||    
T  18555553 ttaacctcgtctaaaagagcgaaggatcaaaaggggagtgccaacgttcatttgaaaagcactgggtgcttgtacctcattga 18555471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 20635902 - 20635779
Alignment:
Q  14 atcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttcatttga 112  Q
    |||||||||| |||||| |||  || || || ||| ||||| ||| |||||| ||||||| || |||||||| || | |||||| ||||| |||||||||    
T  20635902 atcagaagatgcaacctaaagtttcaaatagttgtttattggattcaacctcttctaagatagtgaaagactaaaggaaaggtggcaacggttcatttga 20635803  T
Q  113 aaagcactgggtgcttgtacttca 136  Q
    |||||| ||| ||||||| |||||    
T  20635802 aaagcattggatgcttgtccttca 20635779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 17608268 - 17608397
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaaga-gctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttc 106  Q
    |||| |||||||||| ||||||||||  || || | ||||| ||||| ||| |||||| ||||||| || |||||||| || | |||||| ||||| |||    
T  17608268 agttcatcagaagatgcaacctgaagtttcaaataagctgtttattggattcaacctcatctaagaaagcgaaagactaaaggaaaggtggcaacgattc 17608367  T
Q  107 atttgaaaagcactgggtgcttgtacttca 136  Q
    ||||||||||||  || ||||||| |||||    
T  17608368 atttgaaaagcatgggatgcttgtccttca 17608397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 25675443 - 25675362
Alignment:
Q  60 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaa-gcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||  |||  | | ||||||||||  ||||| ||||||||||| ||||||||||||||| |||||||||    
T  25675443 aacctcgtctaagagaacgaagaattgaaaggaaggtatcaacggtcatttgaaaaagcactgggtgcttgtccttcattga 25675362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 9933585 - 9933660
Alignment:
Q  60 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttc 135  Q
    ||||||||||||||||  |||  | | ||||| ||||  ||||| |||||||||||||||||||||||||| ||||    
T  9933585 aacctcgtctaagagaacgaagaattaaaagggaggtatcaacggtcatttgaaaagcactgggtgcttgtccttc 9933660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 25518932 - 25518891
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||| |||| ||||||||||||||||||||| |||||||||    
T  25518932 caacggtcatctgaaaagcactgggtgcttgtccttcattga 25518891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 25679519 - 25679438
Alignment:
Q  60 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaa-gcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||  |||  | | ||||| ||||  ||||| ||||||||||| ||||||||||||||| |||||||||    
T  25679519 aacctcgtctaagagaacgaagaattgaaaggtaggtatcaacggtcatttgaaaaagcactgggtgcttgtccttcattga 25679438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 140
Target Start/End: Original strand, 25735472 - 25735553
Alignment:
Q  60 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaa-gcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||  |||  | | ||||| ||||  ||||| ||||||||||| ||||||||||||||| |||||||||    
T  25735472 aacctcgtctaagagaacgaagaattgaaagggaggtatcaacggtcatttgaaaaagcactgggtgcttgtccttcattga 25735553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 22386990 - 22386862
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttca 107  Q
    |||| |||||||||| |||||| |||  || || |||||| ||||| ||| |||||| ||||||| || ||| |||| || | ||||||  |||| ||||    
T  22386990 agttcatcagaagatgcaacctaaagtttcaaatagctgtttattggattcaacctcttctaagaaagcgaacgactaaaggaaaggtggaaacggttca 22386891  T
Q  108 tttgaaaagcactgggtgcttgtacttca 136  Q
    ||||||| ||| ||| ||||||| |||||    
T  22386890 tttgaaaggcattggatgcttgtccttca 22386862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 2e-59; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 51988991 - 51989127
Alignment:
Q  4 ctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  51988991 ctgcaagttgattagaagattcaacctgaagactctaagagctgtctattggatttaacctcgtctaagagagcgaaagactaaaaggaaggtgccaacg 51989090  T
Q  104 ttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||||||||||| |||||||||    
T  51989091 ttcatttgaaaagcactgggtgcttgtccttcattga 51989127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 17022214 - 17022081
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    |||||||||||||||||||||||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || |||||||||||||||||     
T  17022214 aagttgatcagaagattcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaaagggaaggtgccaacgttcg 17022115  T
Q  108 tttgaaaagcactgggtgcttgtacttcattgag 141  Q
    ||||||||||| | ||||||||| ||||||||||    
T  17022114 tttgaaaagcattaggtgcttgtccttcattgag 17022081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 31113839 - 31113970
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 108  Q
    ||||||||||||||||||| |||||  ||| ||  ||||| ||||| ||||||||||||||||||||| |||||||| ||||| | ||| ||| ||||||    
T  31113839 agttgatcagaagattcaatctgaaagctcaaatggctgtttattggatttaacctcgtctaagagagcgaaagactaaaagggaagtgacaatgttcat 31113938  T
Q  109 ttgaaaagcactgggtgcttgtacttcattga 140  Q
    |||||||||||| ||||||||| |||||||||    
T  31113939 ttgaaaagcactaggtgcttgtccttcattga 31113970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 22151434 - 22151300
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaac-gttc 106  Q
    |||||||||||||||||||||||||||  || || |||||| | ||| ||| |||||||||||||| || |||||||| || | |||||| |||| ||||    
T  22151434 aagttgatcagaagattcaacctgaagtttcaaatagctgttttttggattcaacctcgtctaagaaagcgaaagactaaaggaaaggtggcaacggttc 22151335  T
Q  107 atttgaaaagcactgggtgcttgtacttcattgag 141  Q
    |||||||||||| ||||||||||| ||||| ||||    
T  22151334 atttgaaaagcattgggtgcttgtccttcaatgag 22151300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 41045931 - 41045798
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaa-ggaaggtgccaacgttc 106  Q
    ||||||||||| |||||||||||||||  || || ||||||||| || ||| |||||| ||||||| || |||||||| ||| ||||| |||||||||||    
T  41045931 aagttgatcaggagattcaacctgaagtttcaaatagctgtctagtggattcaacctcatctaagaaagcgaaagactaaaagggaagatgccaacgttc 41045832  T
Q  107 atttgaaaagcactgggtgcttgtacttcattga 140  Q
      ||||||||||||||||| |||| |||||||||    
T  41045831 gcttgaaaagcactgggtgtttgtccttcattga 41045798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 13148454 - 13148320
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttc 106  Q
    |||||||||||||||| ||||||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || | |||||| ||||| |||    
T  13148454 aagttgatcagaagatgcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaaaggaaaggtggcaacgattc 13148355  T
Q  107 atttgaaaagcactgggtgcttgtacttcattgag 141  Q
    ||||||| |||  ||||||||||| ||||| ||||    
T  13148354 atttgaatagctttgggtgcttgtccttcaatgag 13148320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 336
Target Start/End: Original strand, 32021176 - 32021328
Alignment:
Q  184 ttggcttcttggaaatggtgaaaagattaatttctggaatgatagttggtgtggtgcccccctctctcaggccttgaatatccctcaagcaatctcatct 283  Q
    |||||| ||||| |||||| |||| || | ||||||||||||||| |||||||| || ||||| ||||| ||||| |  || ||| | ||||| |||  |    
T  32021176 ttggctccttggtaatggtcaaaatatcagtttctggaatgatagctggtgtggagcacccctttctcaagccttaagcattcctgatgcaatatcagtt 32021275  T
Q  284 catctttcctctactgttagtgattacattgttaatggtgagtggagtattcc 336  Q
    ||| | || || ||||||||||||||||||||||||||||| |||||||||||    
T  32021276 catttatcttcaactgttagtgattacattgttaatggtgaatggagtattcc 32021328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 10529526 - 10529400
Alignment:
Q  14 atcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaa 113  Q
    |||||||||| |||||| |||  || || |||||  ||||| ||| ||||||||||| || || |||||||| ||||||| |||||||||||| ||||||    
T  10529526 atcagaagatgcaacctaaagtttcaaatagctggttattggattcaacctcgtctaggaaagcgaaagact-aaaggaaagtgccaacgttcgtttgaa 10529428  T
Q  114 aagcactgggtgcttgtacttcattgag 141  Q
    ||||| ||||||||||| ||||||||||    
T  10529427 aagcattgggtgcttgtccttcattgag 10529400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 21736493 - 21736361
Alignment:
Q  9 agttgatcagaagattcaacctgaagactct---aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgtt 105  Q
    ||||||||||||||||||| ||  ||| |||   ||||||||| | || || ||||||||||||||||||| ||| ||   ||||| | |||||||||||    
T  21736493 agttgatcagaagattcaatct--agaatctcaaaagagctgtttctttaagttaacctcgtctaagagagcgaaggatcaaaagggaagtgccaacgtt 21736396  T
Q  106 catttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||||||||| | |||||||    
T  21736395 catttgaaaagcactgggtgcttgtccctcattga 21736361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 2246701 - 2246618
Alignment:
Q  57 tttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    |||||||||||||||||||  ||| || | ||||| |||| ||||||||||||||||||||||| |||| |||| |||||||||    
T  2246701 tttaacctcgtctaagagaacgaaggattaaaagggaggtaccaacgttcatttgaaaagcactaggtgtttgtccttcattga 2246618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 27173162 - 27173092
Alignment:
Q  60 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgt 130  Q
    |||||| ||||| |||| ||||||   ||||| ||||||||||| ||||||||||||||||||||||||||    
T  27173162 aacctcatctaaaagagcgaaagatcaaaagggaggtgccaacggtcatttgaaaagcactgggtgcttgt 27173092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 15650972 - 15651043
Alignment:
Q  58 ttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttg 129  Q
    |||||||||||||||| || ||| ||   ||||||| ||||||||| || ||||||||||||||||||||||    
T  15650972 ttaacctcgtctaagaaagcgaaggatcaaaaggaaagtgccaacggtcctttgaaaagcactgggtgcttg 15651043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 13199143 - 13199226
Alignment:
Q  57 tttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    |||||||||||||||||||  ||   | | ||||| |||| |||||| ||||||||||||||||||||| |||| |||| ||||    
T  13199143 tttaacctcgtctaagagaacgatgaattaaaagggaggtaccaacggtcatttgaaaagcactgggtgtttgtccttctttga 13199226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 15662607 - 15662678
Alignment:
Q  58 ttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttg 129  Q
    |||||||||||||||| || ||| ||   ||||||| |||| |||| || ||||||||||||||||||||||    
T  15662607 ttaacctcgtctaagaaagcgaaggatcaaaaggaaagtgcgaacggtcgtttgaaaagcactgggtgcttg 15662678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 15833591 - 15833463
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttca 107  Q
    |||| |||||||||| |||||| |||  || || || ||| ||||| ||| |||||  ||||||| || |||||||| || | |||||| ||||| ||||    
T  15833591 agttcatcagaagatgcaacctaaagtttcaaatagttgtttattggattcaacctattctaagaaagcgaaagactaaaggaaaggtggcaacggttca 15833492  T
Q  108 tttgaaaagcactgggtgcttgtacttca 136  Q
    ||||||| ||| ||| ||||||| |||||    
T  15833491 tttgaaaggcattggatgcttgtccttca 15833463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 2e-59; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 23065140 - 23065004
Alignment:
Q  4 ctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg 103  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  23065140 ctgcaagttgattagaagattcaacctgaagactctaagagctgtctattggatttaacctcgtctaagagagcgaaagactaaaaggaaggtgccaacg 23065041  T
Q  104 ttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||||||||||| |||||||||    
T  23065040 ttcatttgaaaagcactgggtgcttgtccttcattga 23065004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 19038201 - 19038066
Alignment:
Q  1 aatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgcca 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||||||||    
T  19038201 aatctgcaagttgatcagaatattcaacctgaagactctaagagctgtctattggatttaaccttgtctaagagagcgaaagactaaaaggaaggtgcca 19038102  T
Q  101 acgttcatttgaaaagcactgggtgcttgtacttca 136  Q
    |||||||||||||||||||||||||||||| |||||    
T  19038101 acgttcatttgaaaagcactgggtgcttgtccttca 19038066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 44201206 - 44201067
Alignment:
Q  1 aatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgcca 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||| |||||||  | ||||||| ||||    
T  44201206 aatctgcaagttgataagaagattcaacctgaagactctaagagttgtctattggatttaaactcgtctaagagagcgaaagacaaagaggaaggcgcca 44201107  T
Q  101 acgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  44201106 acgttcatttgaaaagcactgagtgcttgtccttcattga 44201067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 5929897 - 5929758
Alignment:
Q  1 aatctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgcca 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||  ||||||  | ||||||| ||||    
T  5929897 aatctgcaagttgataagaagattcaacctgaagactctaagagttgtctattggatttaaactcgtctaagagagcaaaagacaaagaggaaggcgcca 5929798  T
Q  101 acgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    |||||||||||||||||||||||||||||| ||| |||||    
T  5929797 acgttcatttgaaaagcactgggtgcttgtcctttattga 5929758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 28474413 - 28474292
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 108  Q
    ||||||||||||||||||| ||||||  || ||  ||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28474413 agttgatcagaagattcaatctgaagtttcaaatggctgtttattggatttaacctcgtctaagagagcgaaagactcaaaggaaggtgccaacgttcat 28474314  T
Q  109 ttgaaaagcactgggtgcttgt 130  Q
    ||||||||||||||||||||||    
T  28474313 ttgaaaagcactgggtgcttgt 28474292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 22019524 - 22019401
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaac-gttc 106  Q
    |||||||||||||||||||||||||||  || || |||||||||||||||| |||||||||||||| || |||||||| || |||||||| | || ||||    
T  22019524 aagttgatcagaagattcaacctgaagtttcaaatagctgtctattgaattcaacctcgtctaagaaagcgaaagactaaagggaaggtggctactgttc 22019425  T
Q  107 atttgaaaagcactgggtgcttgt 130  Q
    |||||||||||| |||||||||||    
T  22019424 atttgaaaagcattgggtgcttgt 22019401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 45070547 - 45070680
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaa-ggaaggtgccaacgtt 105  Q
    |||||| ||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  45070547 aagttgttcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgtctaagagagcgaaaga-tcaaatgggaggtgccaacgtt 45070645  T
Q  106 catttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||||| ||| |||||||||    
T  45070646 catttgaaaagcactgggtgcctgtccttcattga 45070680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 52350578 - 52350711
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaagg-aaggtgccaacgttc 106  Q
    ||||||||||| ||||| |||||||||  || || ||||||||| || ||| |||||| ||||||| || |||||||| ||||| |||||||||||||||    
T  52350578 aagttgatcaggagatttaacctgaagtttcaaatagctgtctagtggattcaacctcatctaagaaagcgaaagactaaaagggaaggtgccaacgttc 52350677  T
Q  107 atttgaaaagcactgggtgcttgtacttcattga 140  Q
    | |||||||||||||||||||||| |||||||||    
T  52350678 acttgaaaagcactgggtgcttgtccttcattga 52350711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 22643083 - 22642954
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaac-gttc 106  Q
    |||||||||||||||||||||||||||  || || || ||||||||| ||| |||||||||||||| || |||||||| || | |||||| |||| ||||    
T  22643083 aagttgatcagaagattcaacctgaagtttcaaatagttgtctattggattcaacctcgtctaagaaagcgaaagactaaaggaaaggtggcaacggttc 22642984  T
Q  107 atttgaaaagcactgggtgcttgtacttca 136  Q
    |||||||||||| ||||||||||| |||||    
T  22642983 atttgaaaagcattgggtgcttgtccttca 22642954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 22655665 - 22655536
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaa-cgttc 106  Q
    |||||||||||||||||||||||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || | |||||| |||  ||||    
T  22655665 aagttgatcagaagattcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaaaggaaaggtggcaatggttc 22655566  T
Q  107 atttgaaaagcactgggtgcttgtacttca 136  Q
    |||||||||||| ||||||||||| |||||    
T  22655565 atttgaaaagcattgggtgcttgtccttca 22655536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 28380181 - 28380048
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||| |||||||| ||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || |||| ||||||||||||     
T  28380181 aagttgatcaggagattcaatctgaagtttcaaacagctgtctattggattcaacctcgtctaagaaagcgaaagactaaagggaatgtgccaacgttcg 28380082  T
Q  108 tttgaaaagcactgggtgcttgtacttcattgag 141  Q
    ||||||||||| || |||||||| |||| |||||    
T  28380081 tttgaaaagcattgagtgcttgtccttctttgag 28380048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 26548149 - 26548277
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaac-gttc 106  Q
    |||||||| |||||||||||||  |||  || || |||||||||||| ||| |||||||||||||| || |||||||| ||||||||||| || | ||||    
T  26548149 aagttgataagaagattcaaccgaaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaaaaggaaggtggcagcagttc 26548248  T
Q  107 atttgaaaagcactgggtgcttgtacttc 135  Q
    |||||||||||| ||||||||||| ||||    
T  26548249 atttgaaaagcattgggtgcttgtccttc 26548277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 20251921 - 20251827
Alignment:
Q  47 gtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattgag 141  Q
    |||||| | ||| |||||||||||||| || |||||||| || ||||||||||||||||| |||||||| || ||||||||||| ||||||||||    
T  20251921 gtctatgggattcaacctcgtctaagaaagcgaaagactaaagggaaggtgccaacgttcgtttgaaaaacattgggtgcttgtccttcattgag 20251827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 46180774 - 46180906
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||| ||| |  ||| || ||| ||| | || || ||||||||||||||||||| ||| ||   ||||| | |||||||||||||    
T  46180774 agttgatcagaagattcaatctggaatctcaaaagagttgtttctttaagttaacctcgtctaagagagcgaaggatcaaaagggaagtgccaacgttca 46180873  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||||||| | |||||||    
T  46180874 tttgaaaagcactgggtgcttgtccctcattga 46180906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 20799250 - 20799127
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 108  Q
    |||||||||| |||||||| |||||  ||| ||||||||| | ||||| |||| |||||||| || ||  || ||   ||||| | ||||||||||||||    
T  20799250 agttgatcaggagattcaatctgaaatctcaaagagctgtttcttgaagttaatctcgtctacgaaagcaaaggatcaaaagggaagtgccaacgttcat 20799151  T
Q  109 ttgaaaagcactgggtgcttgtac 132  Q
    ||| ||||||||||||||||||||    
T  20799150 ttggaaagcactgggtgcttgtac 20799127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 23927195 - 23927113
Alignment:
Q  58 ttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||| ||| ||   ||||||| ||| |||||||| ||||||||||||| |||| || ||| |||||||    
T  23927195 ttaacctcgtctaagagagcgaaggatcaaaaggaaagtgtcaacgttcgtttgaaaagcacttggtgtttttacctcattga 23927113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 22609956 - 22610001
Alignment:
Q  95 gtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||| ||||||||||||||||| |||||||||| |||||||    
T  22609956 gtgccaacgctcatttgaaaagcactgagtgcttgtacctcattga 22610001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 20255257 - 20255209
Alignment:
Q  4 ctgcaagttgatcagaagattcaacctgaagactctaagagctgtctat 52  Q
    |||||||||||||||||||||||| |||||| || |||||| |||||||    
T  20255257 ctgcaagttgatcagaagattcaatctgaagtctttaagagttgtctat 20255209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 21544216 - 21544088
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttca 107  Q
    |||| |||||||||| |||||| |||  || || |||| | ||||| ||| |||||| || |||| || |||||||| || | || ||| ||||| ||||    
T  21544216 agttcatcagaagatgcaacctaaagtttcaaatagctatttattggattcaacctcttcaaagaaagcgaaagactaaaggaaaagtggcaacgattca 21544117  T
Q  108 tttgaaaagcactgggtgcttgtacttca 136  Q
    ||||||||||| ||| |||||||||||||    
T  21544116 tttgaaaagcattggatgcttgtacttca 21544088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 18310918 - 18310993
Alignment:
Q  60 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttc 135  Q
    |||||||||||| |||  ||| || | |||||||| |  ||||| |||||||||||||||||||||||||| ||||    
T  18310918 aacctcgtctaaaagaacgaaggattgaaaggaagatatcaacggtcatttgaaaagcactgggtgcttgtccttc 18310993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 675667 - 675626
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||| |||||||||||||||| ||||||||| |||||||||    
T  675667 caacggtcatttgaaaagcactcggtgcttgtccttcattga 675626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 14388111 - 14388147
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttc 135  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  14388111 caacggtcatttgaaaagcactgggtgcttgtccttc 14388147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 17371229 - 17371101
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaac-gttca 107  Q
    |||| |||| ||||| ||||||||||  || || || ||| ||||| ||| |||||| ||||||| || |||||||| || | ||||||  ||| |||||    
T  17371229 agttcatcaaaagatgcaacctgaagtttcaaatagttgtttattggattcaacctcttctaagaaagcgaaagactaaaggaaaggtggaaacagttca 17371130  T
Q  108 tttgaaaagcactgggtgcttgtacttca 136  Q
    ||||||| ||| ||| ||||||| |||||    
T  17371129 tttgaaaggcattggatgcttgtccttca 17371101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 61413 - 61277
Alignment:
Q  4 ctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| |||||||| |||||||||||||||||    
T  61413 ctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattggatttaacctcgtttaagggagcgaaagactaaaaggaaggtgccaacg 61314  T
Q  104 ttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    |||||| |||||||||||||||||||| |||||||||    
T  61313 ttcattagaaaagcactgggtgcttgtccttcattga 61277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 1e-54; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 14778317 - 14778453
Alignment:
Q  4 ctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| |||||||| |||||||||||||||||    
T  14778317 ctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattggatttaacctcgtttaagggagcgaaagactaaaaggaaggtgccaacg 14778416  T
Q  104 ttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    |||||| |||||||||||||||||||| |||||||||    
T  14778417 ttcattagaaaagcactgggtgcttgtccttcattga 14778453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 36209987 - 36210120
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||||||||||| ||| || || ||||||||| |||||||||||||||||| || |||||||| || ||||||||||||||||      
T  36209987 aagttgatcagaagattcaacctgaagtctcaaatagttgtctattggatttaacctcgtctaagaaagcgaaagactaaagggaaggtgccaacgtttg 36210086  T
Q  108 tttgaaaagcactgggtgcttgtacttcattgag 141  Q
    ||||||||||| |||||| |||| ||||||||||    
T  36210087 tttgaaaagcattgggtgtttgtccttcattgag 36210120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 18006939 - 18007061
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||||||| ||  || || ||| ||||| ||| ||||||||||||||||||||| ||| |||| ||||| ||||||||||||| |    
T  18006939 agttgatcagaagattcaacctggagtttcaaaagagttgtcttttggatttaacctcgtctaagagagcgaaggactaaaagggaggtgccaacgttaa 18007038  T
Q  108 tttgaaaagcactgggtgcttgt 130  Q
    |||||||||||||||||||||||    
T  18007039 tttgaaaagcactgggtgcttgt 18007061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 17993671 - 17993804
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaagg-aaggtgccaacgttc 106  Q
    ||||||||||| ||||| |||||||||  || || ||||||||| || ||| |||||| ||||||| || |||||||| ||||| |||||||||||||||    
T  17993671 aagttgatcaggagatttaacctgaagtttcaaatagctgtctagtggattcaacctcatctaagaaagcgaaagactaaaagggaaggtgccaacgttc 17993770  T
Q  107 atttgaaaagcactgggtgcttgtacttcattga 140  Q
    | |||||||||||||||||||||| |||||||||    
T  17993771 acttgaaaagcactgggtgcttgtccttcattga 17993804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 19244131 - 19244058
Alignment:
Q  57 tttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgt 130  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19244131 tttaacctcgtctaagagagcgaaagactcaaaggaaggtgtcaacgttcatttgaaaagcactgggtgcttgt 19244058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 46 - 140
Target Start/End: Original strand, 14710695 - 14710789
Alignment:
Q  46 tgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||| |||||||||||| |||| ||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||    
T  14710695 tgtctattggatttaacctcgtttaagggagcgaaagactaaaaggaaggtgccaacgttcattagaaaagcactaggtgcttgtccttcattga 14710789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 18774534 - 18774666
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    |||||||| |||||||||| |||||  ||| || ||||||||| || || |||||||||||||||||||  || ||   ||||| |||||||||||||||    
T  18774534 agttgatctgaagattcaatctgaaatctcaaaagagctgtctctttaagttaacctcgtctaagagagcaaaggatcaaaagggaggtgccaacgttca 18774633  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    |||||||||||||||||| |||| |||||||||    
T  18774634 tttgaaaagcactgggtgtttgtccttcattga 18774666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 8997136 - 8997251
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 108  Q
    ||||||||||||||| ||| |||||  ||| ||||||||||| ||||| ||||||||||| |||| || ||| ||   ||||||| ||||||||||||||    
T  8997136 agttgatcagaagatccaatctgaaatctcaaagagctgtctcttgaagttaacctcgtccaagaaagcgaaggatcaaaaggaaagtgccaacgttcat 8997235  T
Q  109 ttgaaaagcactgggt 124  Q
    ||||||||||||||||    
T  8997236 ttgaaaagcactgggt 8997251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 16819230 - 16819363
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||| |||||  ||| || ||| ||||| ||||| |||||||||||||||| || ||||||   ||||| || ||||||||||||    
T  16819230 agttgatcagaagattcaatctgaaatctcaaaagagttgtctcttgaagttaacctcgtctaagaaagcgaaagatcgaaagggagttgccaacgttca 16819329  T
Q  108 tttg-aaaagcactgggtgcttgtacttcattga 140  Q
    |||| ||||||||||||||||||| ||| |||||    
T  16819330 tttgaaaaagcactgggtgcttgtcctttattga 16819363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 33378594 - 33378465
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttc 106  Q
    ||||| |||||||||| ||||||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || | |||||| ||||| |||    
T  33378594 aagttcatcagaagatgcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaaaggaaaggtggcaacgattc 33378495  T
Q  107 atttgaaaagcactgggtgcttgtacttca 136  Q
    |||||||| ||| ||| ||||||| |||||    
T  33378494 atttgaaaggcattggatgcttgtccttca 33378465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 23509469 - 23509387
Alignment:
Q  58 ttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||| ||| ||   ||||||| ||| |||||||| ||||||||||||||||||||| ||| |||||||    
T  23509469 ttaacctcgtctaagagagcgaatgatcaaaaggaaagtgtcaacgttcgtttgaaaagcactgggtgcttttacctcattga 23509387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 55651635 - 55651594
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  55651635 caacgttcatttgaaaagcactgggtgcttgtccttcattga 55651594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 8998861 - 8998997
Alignment:
Q  4 ctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg 103  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| || |||||||| |||||||||||||||||    
T  8998861 ctgcaagttgatcagaagattcaacctgaagtctctaagagctgtctattggatttaacctcgtctaagaaagtgaaagactaaaaggaaggtgccaacg 8998960  T
Q  104 ttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||| |||||||||||  ||||||||    
T  8998961 ttcatttgaaaagcattgggtgcttgtctttcattga 8998997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 13174536 - 13174669
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||||||||||| ||| || |||||||||||| ||| |||||||||||||| ||||||||||| || |||||||||||||||||     
T  13174536 aagttgatcagaagattcaacctgaagtctcaaatagctgtctattggattcaacctcgtctaagaaagagaaagactaaagggaaggtgccaacgttcg 13174635  T
Q  108 tttgaaaagcactgggtgcttgtacttcattgag 141  Q
    ||||||||||| ||||||||| | ||||||||||    
T  13174636 tttgaaaagcattgggtgcttctccttcattgag 13174669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 11086976 - 11087108
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||| |||||||| ||||||  || || |||||||||||| ||| ||||||||| |||| |  |||||||| |||||||||| |||||||||     
T  11086976 aagttgatcaggagattcaatctgaagtttcaaacagctgtctattggattcaacctcgtcaaagaaaacgaaagactaaaaggaaggtaccaacgttcg 11087075  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||| ||||||||||| |||||||||    
T  11087076 tttgaaaagcattgggtgcttgtccttcattga 11087108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 336
Target Start/End: Original strand, 30220778 - 30220930
Alignment:
Q  184 ttggcttcttggaaatggtgaaaagattaatttctggaatgatagttggtgtggtgcccccctctctcaggccttgaatatccctcaagcaatctcatct 283  Q
    |||||| ||||| |||||| |||| || | ||||||||||||||| |||||||| || ||||| ||||| ||||| |  || ||| | ||||| |||  |    
T  30220778 ttggctccttggtaatggtcaaaatatcagtttctggaatgatagctggtgtggagcacccctttctcaagccttaagcattcctgatgcaatatcagtt 30220877  T
Q  284 catctttcctctactgttagtgattacattgttaatggtgagtggagtattcc 336  Q
    ||| | || || ||||||||||||||||||||||||||||| |||||||||||    
T  30220878 catttatcttcaactgttagtgattacattgttaatggtgaatggagtattcc 30220930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 24882352 - 24882474
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||| |||||  ||| || ||||||| |  | || ||||||||||||||||||| ||| ||   ||||| | |||||||||||||    
T  24882352 agttgatcagaagattcaatctgaaatctcaaaagagctgtttcattaagttaacctcgtctaagagagcgaacgatcaaaagggaagtgccaacgttca 24882451  T
Q  108 tttgaaaagcactgggtgcttgt 130  Q
    ||||||||||| |||||||||||    
T  24882452 tttgaaaagcaatgggtgcttgt 24882474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 29590312 - 29590229
Alignment:
Q  57 tttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||| ||||||||| |||  ||| || | ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||    
T  29590312 tttaatctcgtctaaaagaacgaaggattaaaagggaggtaccaacgttcatttgaaaagcactgggtgcttgtccttcattga 29590229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 13682640 - 13682562
Alignment:
Q  57 tttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttc 135  Q
    |||||||||||||||||||  |||  | | ||||| |||| |||||||||||||||||| |||||||||||||| ||||    
T  13682640 tttaacctcgtctaagagaacgaagaattaaaagggaggtaccaacgttcatttgaaaatcactgggtgcttgtccttc 13682562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 3476351 - 3476399
Alignment:
Q  87 aaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttc 135  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| ||||    
T  3476351 aaagggaggtaccaacgttcatttgaaaagcactgggtgcttgtccttc 3476399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 26209571 - 26209612
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  26209571 caacggtcatttgaaaagcactgggtgcttgtccttcattga 26209612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 8933837 - 8933762
Alignment:
Q  60 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttc 135  Q
    ||||||||||||||||  |||  | | ||||| ||||  ||||| |||||||||||||||||||||||||| ||||    
T  8933837 aacctcgtctaagagaacgaagaattaaaagggaggtatcaacggtcatttgaaaagcactgggtgcttgtccttc 8933762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 12734189 - 12734225
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttc 135  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  12734189 caacggtcatttgaaaagcactgggtgcttgtccttc 12734225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 48382424 - 48382388
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttc 135  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  48382424 caacggtcatttgaaaagcactgggtgcttgtccttc 48382388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 21025393 - 21025529
Alignment:
Q  4 ctgcaagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg 103  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||||||| ||| |||||||||||||| || |||||||| |||||||||||||||||    
T  21025393 ctgcaagttgatcagaagattcaacctgatgtttctaagagctgtctattggattcaacctcgtctaagaaagcgaaagactaaaaggaaggtgccaacg 21025492  T
Q  104 ttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  21025493 ttcatttgaaaagcattgggtgcttgtccttcattga 21025529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 20646478 - 20646600
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||||||| ||  || || ||| ||||| ||| ||||||||||||||||||||| ||| |||| ||||| ||||||||||||| |    
T  20646478 agttgatcagaagattcaacctggagtttcaaaagagttgtcttttggatttaacctcgtctaagagagcgaaggactaaaagggaggtgccaacgttaa 20646577  T
Q  108 tttgaaaagcactgggtgcttgt 130  Q
    |||||||||||||||||||||||    
T  20646578 tttgaaaagcactgggtgcttgt 20646600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 19299912 - 19300012
Alignment:
Q  40 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattg 139  Q
    ||||| ||||| ||||||||||||||||||||||||| ||| ||   ||||| ||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  19299912 aagagttgtctcttgaatttaacctcgtctaagagagcgaaggatcaaaagggaggtgtcaacgttcatttgaaaagcactgggtgtttgtccttcattg 19300011  T
Q  140 a 140  Q
    |    
T  19300012 a 19300012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 19312919 - 19313019
Alignment:
Q  40 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattg 139  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||   ||||| | ||  ||||||||||||||||||||||| |||||||| ||||||||    
T  19312919 aagagctgtctcttgaatttaacctcgtctaagagagcgaaggatcaaaagggatgtttcaacgttcatttgaaaagcactgtgtgcttgtccttcattg 19313018  T
Q  140 a 140  Q
    |    
T  19313019 a 19313019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 24814500 - 24814623
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttc 106  Q
    ||||| |||||||||| ||||||||||  || || |||||| ||||| ||| |||||| ||||||| || |||||||| || | |||||| ||||| |||    
T  24814500 aagttcatcagaagatgcaacctgaagtttcaaatagctgtttattggattcaacctcttctaagatagcgaaagactaaaggaaaggtggcaacggttc 24814599  T
Q  107 atttgaaaagcactgggtgcttgt 130  Q
    |||||||||||| |||||||||||    
T  24814600 atttgaaaagcattgggtgcttgt 24814623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 19497940 - 19497993
Alignment:
Q  87 aaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  19497940 aaagggaggtgccaacgttcatttgaaaagcactgggtgcttgtccttcattga 19497993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 19356647 - 19356546
Alignment:
Q  40 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttg-aaaagcactgggtgcttgtacttcatt 138  Q
    ||||||||| | || || ||||||||||||||||||| ||| ||   ||||| | ||||||||||||||||| ||||||||||||||||||| | |||||    
T  19356647 aagagctgtttctttaagttaacctcgtctaagagagcgaaggatcaaaagggaagtgccaacgttcatttgaaaaagcactgggtgcttgtccctcatt 19356548  T
Q  139 ga 140  Q
    ||    
T  19356547 ga 19356546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 24793925 - 24794048
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttc 106  Q
    ||||| |||||||||| ||||||||||  || || |||||| ||||| ||| |||||| | ||||| || |||||||| ||   |||||| ||||| |||    
T  24793925 aagttcatcagaagatgcaacctgaagtttcaaatagctgtttattggattcaacctcttttaagatagcgaaagactaaagaaaaggtggcaacggttc 24794024  T
Q  107 atttgaaaagcactgggtgcttgt 130  Q
    |||||||||||| |||||||||||    
T  24794025 atttgaaaagcattgggtgcttgt 24794048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 967464 - 967505
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  967464 caacggtcatttgaaaagcactgggtgcttgtccttcattga 967505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 24275293 - 24275252
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  24275293 caacggtcatttgaaaagcactgggtgcttgtccttcattga 24275252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 17969170 - 17969211
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||| ||||||||||||||||||||||| || |||||||||    
T  17969170 caacggtcatttgaaaagcactgggtgctcgtccttcattga 17969211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 22763962 - 22763881
Alignment:
Q  60 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaa-aagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||  |||  | | ||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||    
T  22763962 aacctcgtctaagagaacgaagaattaaaagggaggtatcaacggtcatttgaagaagcactgggtgcttgtccttcattga 22763881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 22774666 - 22774585
Alignment:
Q  60 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaa-aagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||  |||  | | ||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||    
T  22774666 aacctcgtctaagagaacgaagaattaaaagggaggtatcaacggtcatttgaagaagcactgggtgcttgtccttcattga 22774585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 22780044 - 22779963
Alignment:
Q  60 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaa-aagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||  |||  | | ||||| ||||  ||||| ||||||||| ||||||||||||||||| |||||||||    
T  22780044 aacctcgtctaagagaacgaagaattaaaagggaggtatcaacggtcatttgaagaagcactgggtgcttgtccttcattga 22779963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 23271091 - 23271222
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 108  Q
    ||||||||||||||||||||||||||  || ||||||||||| ||| |||||||||||||||||| || |||||||| ||||||||||||||||||||||    
T  23271091 agttgatcagaagattcaacctgaagtttcaaagagctgtcttttggatttaacctcgtctaagaaagcgaaagactaaaaggaaggtgccaacgttcat 23271190  T
Q  109 ttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||| || ||||||||||| |||||||||    
T  23271191 ttgaaaaacattgggtgcttgtccttcattga 23271222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 19461343 - 19461211
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||||||||||  || || ||||||||| ||||||||||||||||||||||||| ||| || | ||||| |||||||||||||||    
T  19461343 agttgatcagaagattcaacctgaagtttcaaaagagctgtcttttgaatttaacctcgtctaagagagcgaaggattaaaagggaggtgccaacgttca 19461244  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||||||| |||||||||    
T  19461243 tttgaaaagcactgggtgcttgtccttcattga 19461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 19559021 - 19558889
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||||||||||  || || ||||||||| ||||||||||||||||||||||||| ||| || | ||||| |||||||||||||||    
T  19559021 agttgatcagaagattcaacctgaagtttcaaaagagctgtcttttgaatttaacctcgtctaagagagcgaaggattaaaagggaggtgccaacgttca 19558922  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||||||| |||||||||    
T  19558921 tttgaaaagcactgggtgcttgtccttcattga 19558889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 7018268 - 7018399
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 108  Q
    |||||||||||||||||||||||||||||||||||| |||||  || |||||| | |||||||||||| ||||||   | ||| ||||||||||||||||    
T  7018268 agttgatcagaagattcaacctgaagactctaagagttgtctcctggatttaaacccgtctaagagagcgaaagagaaagagggaggtgccaacgttcat 7018367  T
Q  109 ttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||| |||| |||||||||    
T  7018368 ttgaaaagcactgggtgtttgtccttcattga 7018399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 8032213 - 8032080
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||| |||||||| ||||||  || || || |||||||||  || |||||||||||||| || |||||||| || |||||||||||||||||     
T  8032213 aagttgatcaggagattcaatctgaagtttcaaatagttgtctattggtttcaacctcgtctaagaaagcgaaagactaaagggaaggtgccaacgttcg 8032114  T
Q  108 tttgaaaagcactgggtgcttgtacttcattgag 141  Q
    ||||||||||| ||||||||||| |||| |||||    
T  8032113 tttgaaaagcattgggtgcttgtccttccttgag 8032080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 22166910 - 22167041
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 108  Q
    ||||||||||||||||||| |||||  ||| ||||||||||| ||||| |||| |||||||| || ||  || ||   ||||||| || |||||||||||    
T  22166910 agttgatcagaagattcaatctgaaatctcaaagagctgtctcttgaagttaatctcgtctacgaaagcaaaggatcaaaaggaaagttccaacgttcat 22167009  T
Q  109 ttgaaaagcactgggtgcttgtacttcattga 140  Q
    |||||||||||||||||||||||| |||||||    
T  22167010 ttgaaaagcactgggtgcttgtacctcattga 22167041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 22135745 - 22135868
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 108  Q
    ||||||||||||||||||| |||||  ||| ||||||||||| ||||| |||| |||||||| || ||  || ||   ||||||| ||||||| ||||||    
T  22135745 agttgatcagaagattcaatctgaaatctcaaagagctgtctcttgaagttaatctcgtctacgaaagcaaaggatcaaaaggaaagtgccaaagttcat 22135844  T
Q  109 ttgaaaagcactgggtgcttgtac 132  Q
    ||||||||||||||||||||||||    
T  22135845 ttgaaaagcactgggtgcttgtac 22135868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 130
Target Start/End: Complemental strand, 29379759 - 29379636
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaac-gttc 106  Q
    ||||| |||||||||||||||| ||||  || || |||||||||||||||| |||||||||||||| || |||||||| ||  ||||||| |||| ||||    
T  29379759 aagtttatcagaagattcaacccgaagtttcaaatagctgtctattgaattcaacctcgtctaagaaagcgaaagactaaagagaaggtggcaacggttc 29379660  T
Q  107 atttgaaaagcactgggtgcttgt 130  Q
    |||||||||||| |||| ||||||    
T  29379659 atttgaaaagcattgggcgcttgt 29379636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 17519028 - 17519139
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaac-gttc 106  Q
    |||||||||||||||||||||| ||||  || || |||||||||||| ||| ||||||||| |||| || |||||||| || |||||||| |||| ||||    
T  17519028 aagttgatcagaagattcaacccgaagtttcaaatagctgtctattggattcaacctcgtccaagaaagcgaaagactaaagggaaggtggcaacggttc 17519127  T
Q  107 atttgaaaagca 118  Q
    ||||||||||||    
T  17519128 atttgaaaagca 17519139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 28903633 - 28903516
Alignment:
Q  14 atcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaac-gttcatttga 112  Q
    |||||||||| |||||| |||  || || || ||| ||||| ||| |||||||||||||| || |||||||| || | |||||| |||| ||||||||||    
T  28903633 atcagaagatgcaacctaaagtttcaaatagttgtttattggattcaacctcgtctaagaaagcgaaagactaaaggaaaggtggcaacggttcatttga 28903534  T
Q  113 aaagcactgggtgcttgt 130  Q
    |||||||||| |||||||    
T  28903533 aaagcactggatgcttgt 28903516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 40003358 - 40003276
Alignment:
Q  60 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttcatttgaaaagcactgggtgcttgtacttcattgag 141  Q
    |||||||||||||| |  |||||||| || |||||||| ||||| ||||||||||||||| ||||||||||| ||||| ||||    
T  40003358 aacctcgtctaagaaaacgaaagactaaagggaaggtggcaacggttcatttgaaaagcattgggtgcttgtccttcaatgag 40003276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 3843826 - 3843785
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  3843826 caacggtcatttgaaaagcactgggtgcttgtccttcattga 3843785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 20259594 - 20259635
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  20259594 caacggtcatttgaaaagcactgggtgcttgtccttcattga 20259635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 21046224 - 21046265
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  21046224 caacggtcatttgaaaagcactgggtgcttgtccttcattga 21046265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 22211365 - 22211406
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  22211365 caacgttcatttgaaaaacactgggtgcttgtacctcattga 22211406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 23370864 - 23370811
Alignment:
Q  87 aaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||| |||| |||||| |||||||||||||||||||||||||| |||| ||||    
T  23370864 aaagggaggtaccaacggtcatttgaaaagcactgggtgcttgtccttctttga 23370811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 5e-38; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 13405300 - 13405168
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||| |||||||||||||||  || || || ||||||||| ||||||||||||||||| ||| |||| ||| |||||||||||||||||||||    
T  13405300 aagttgatcaggagattcaacctgaagtttcaaatagttgtctattggatttaacctcgtctaagggagcgaaatactaaaaggaaggtgccaacgttca 13405201  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    || |||||||||||||||||||| |||||||||    
T  13405200 ttagaaaagcactgggtgcttgtccttcattga 13405168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 20215069 - 20215202
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||||| ||||| ||| || | || ||||||| ||| |||||||||||||| || |||||||| || ||||||||||||||||      
T  20215069 aagttgatcagaagattcaacatgaagtctcaaataactatctattggattcaacctcgtctaagaaagcgaaagactaaagggaaggtgccaacgtttg 20215168  T
Q  108 tttgaaaagcactgggtgcttgtacttcattgag 141  Q
    ||||||||||| ||||||||||| ||||||||||    
T  20215169 tttgaaaagcattgggtgcttgtccttcattgag 20215202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 40228842 - 40228709
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||| |||||||| ||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || |||||||||||||||||     
T  40228842 aagttgatcaggagattcaatctgaagtttcaaacagctgtctattggattcaacctcgtctaagaaagcgaaagactaaagggaaggtgccaacgttcg 40228743  T
Q  108 tttgaaaagcactgggtgcttgtacttcattgag 141  Q
    ||||||||||| |||||| |||| ||||||||||    
T  40228742 tttgaaaagcattgggtgattgtccttcattgag 40228709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 20168036 - 20168168
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||| ||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||||||||||||| ||| ||   ||||| |||||||||||||||    
T  20168036 agttgttcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgtctaagagagcgaaggatcaaaagggaggtgccaacgttca 20168135  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||||||| |||||||||    
T  20168136 tttgaaaagcactgggtgcttgtccttcattga 20168168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 40032723 - 40032856
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||| |||||||| ||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || |||||||||||||||||     
T  40032723 aagttgatcaggagattcaatctgaagtttcaaacagctgtctattggattcaacctcgtctaagaaagcgaaagactaaagggaaggtgccaacgttcg 40032822  T
Q  108 tttgaaaagcactgggtgcttgtacttcattgag 141  Q
    ||||||||||| | ||||||||| |||| |||||    
T  40032823 tttgaaaagcatttggtgcttgtccttctttgag 40032856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 13534100 - 13533968
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||| |||||  ||| || ||| ||||| ||||| ||||||||||||||||||| ||| ||   ||||| | |||||||||||||    
T  13534100 agttgatcagaagattcaatctgaaatctcaaaagagttgtctcttgaagttaacctcgtctaagagagcgaatgatcaaaagggaagtgccaacgttca 13534001  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||||||| | |||||||    
T  13534000 tttgaaaagcactgggtgcttgtccctcattga 13533968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 36095622 - 36095754
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||||||||||||| ||||||   ||||| || |||||||||||     
T  36095622 agttgatcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgtctaagagagcgaaagatcgaaagggagttgccaacgttct 36095721  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    |||||||||||||| |||||||| ||| |||||    
T  36095722 tttgaaaagcactgcgtgcttgtcctttattga 36095754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 36097079 - 36097211
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||||||||||||| ||||||   ||||| || |||||||||||     
T  36097079 agttgatcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgtctaagagagcgaaagatcgaaagggagttgccaacgttct 36097178  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    |||||||||||||| |||||||| ||| |||||    
T  36097179 tttgaaaagcactgcgtgcttgtcctttattga 36097211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 1915601 - 1915468
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||| |||||||| ||||||  || || |||||||||||| | | |||||||||||||| || ||||| ||  |||||||||||||||||||     
T  1915601 aagttgatcaggagattcaatctgaagtttcaaatagctgtctattggactcaacctcgtctaagaaagcgaaagtctataaggaaggtgccaacgttcg 1915502  T
Q  108 tttgaaaagcactgggtgcttgtacttcattgag 141  Q
    ||||||||||| |||||| |||| |||| |||||    
T  1915501 tttgaaaagcattgggtgtttgtccttctttgag 1915468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 35543098 - 35543218
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||| |||||  ||| || ||||||||| ||||| ||||||||||||||||||| ||| ||   ||||| | |||| ||||||||    
T  35543098 agttgatcagaagattcaatctgaaatctcaaaagagctgtctcttgaagttaacctcgtctaagagagcgaaggatcaaaagggaagtgctaacgttca 35543197  T
Q  108 tttgaaaagcactgggtgctt 128  Q
    |||||||||||||||||||||    
T  35543198 tttgaaaagcactgggtgctt 35543218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 336
Target Start/End: Complemental strand, 17629111 - 17628959
Alignment:
Q  184 ttggcttcttggaaatggtgaaaagattaatttctggaatgatagttggtgtggtgcccccctctctcaggccttgaatatccctcaagcaatctcatct 283  Q
    |||||| ||||| |||||| |||| || | ||||||||||||||| |||||||| || ||||| ||||| ||||| |  || ||| | ||||| |||  |    
T  17629111 ttggctccttggtaatggtcaaaatatcagtttctggaatgatagctggtgtggagcacccctttctcaagccttaagcattcctgatgcaatatcagtt 17629012  T
Q  284 catctttcctctactgttagtgattacattgttaatggtgagtggagtattcc 336  Q
    ||| | || || ||||||||||||||||||||||||||||| |||||||||||    
T  17629011 catttatcttcaactgttagtgattacattgttaatggtgaatggagtattcc 17628959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 13523373 - 13523251
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||| |||||  ||| || ||| ||||| ||||| ||||||| ||||||||||| ||| ||   ||||| | |||||||||||||    
T  13523373 agttgatcagaagattcaatctgaaatctcaaaagagttgtctcttgaagttaaccttgtctaagagagcgaaggatcaaaagggaagtgccaacgttca 13523274  T
Q  108 tttgaaaagcactgggtgcttgt 130  Q
    ||||||||| |||||||| ||||    
T  13523273 tttgaaaagtactgggtgattgt 13523251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 20416964 - 20417005
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  20416964 caacggtcatttgaaaagcactgggtgcttgtccttcattga 20417005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 40237 - 40356
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 108  Q
    ||||||||||||||||||| ||||||  || ||  ||||| ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  40237 agttgatcagaagattcaatctgaagtttcaaatggctgtttattggatttaacctcatctaagagagtgaaagactcaaaggaaggtgccaacgttcat 40336  T
Q  109 ttgaaaagcactgggtgctt 128  Q
    ||||||||||||||||||||    
T  40337 ttgaaaagcactgggtgctt 40356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 58783 - 58902
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 108  Q
    ||||||||||||||||||| ||||||  || ||  ||||| ||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  58783 agttgatcagaagattcaatctgaagtttcaaatggctgtttattggatttaacctcgtctaagagagcgaaagactcaaacgaaggtgccaacgttcat 58882  T
Q  109 ttgaaaagcactgggtgctt 128  Q
    ||||||||||||||||||||    
T  58883 ttgaaaagcactgggtgctt 58902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 22227 - 22106
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 108  Q
    |||||||||||||||||||  |||||  || ||  ||||| |||||  |||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  22227 agttgatcagaagattcaatttgaagtttcaaatggctgtttattggttttaacctcgtctaagagagcgaaagactcaaaggaaggtgtcaacgttcat 22128  T
Q  109 ttgaaaagcactgggtgcttgt 130  Q
    ||||||||||||||||||||||    
T  22127 ttgaaaagcactgggtgcttgt 22106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 7542 - 7661
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 108  Q
    ||||||||||||||||||| ||||||  || ||  | ||| ||||| ||||||||| |||||||| || |||||||||||||||||||||||||||||||    
T  7542 agttgatcagaagattcaatctgaagtttcaaatggttgtttattggatttaaccttgtctaagaaagcgaaagactcaaaggaaggtgccaacgttcat 7641  T
Q  109 ttgaaaagcactgggtgctt 128  Q
    ||||||||||||||||||||    
T  7642 ttgaaaagcactgggtgctt 7661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 127920 - 127879
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||| |||||| ||||||||||||||||||| |||||||||    
T  127920 caacggtcatttaaaaagcactgggtgcttgtccttcattga 127879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 61920 - 61787
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    |||||||||||||||||||| ||||||  || || |||||||||||| ||| |||||| ||||||| || |||| ||| || ||||||||||||||||      
T  61920 aagttgatcagaagattcaatctgaagtttcaaatagctgtctattggattcaacctcatctaagaaagcgaaatactaaagggaaggtgccaacgtttg 61821  T
Q  108 tttgaaaagcactgggtgcttgtacttcattgag 141  Q
    ||||||||||| ||||||||||| ||||||||||    
T  61820 tttgaaaagcattgggtgcttgtccttcattgag 61787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 117466 - 117378
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggt 96  Q
    |||||||||||||||||||| || |||  || || || ||||||||  ||| |||||| ||||||| || |||||||| || |||||||    
T  117466 aagttgatcagaagattcaatctaaagtttcaaatagatgtctattagattcaacctcatctaagaaagcgaaagactaaagggaaggt 117378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 141
Target Start/End: Original strand, 17730 - 17862
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 108  Q
    ||||||| || |||||| ||||||||  || || || ||| ||||| ||| |||||| ||||||| || |||||||| ||||||||||||||||||||||    
T  17730 agttgattagtagattctacctgaagtttcaaatagttgtttattggattcaacctcatctaagaaagcgaaagactaaaaggaaggtgccaacgttcat 17829  T
Q  109 ttgaaaagcactgggtgcttgtacttcattgag 141  Q
    |||||||||| ||||||||||| ||||||||||    
T  17830 ttgaaaagcattgggtgcttgtccttcattgag 17862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 9483 - 9351
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcat 108  Q
    ||||||| || |||||| ||||||||  || || |||||| ||||| ||| |||||| ||||||| || |||||||| || |||||||||||||||||||    
T  9483 agttgattagtagattctacctgaagtttcaaatagctgtttattggattcaacctcatctaagaaagcgaaagactaaatggaaggtgccaacgttcat 9384  T
Q  109 ttgaaaagcactgggtgcttgtacttcattgag 141  Q
    |||||||||| ||||||||||| ||||||||||    
T  9383 ttgaaaagcattgggtgcttgtccttcattgag 9351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 58666 - 58534
Alignment:
Q  9 agttgatcagaagattcaacctgaagactc-taagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||| |||||  ||| |||||||||||| || || ||||||||||||||||||| ||| ||   ||||| | |||||||||||||    
T  58666 agttgatcagaagattcaatctgaaatctcataagagctgtctctttaagttaacctcgtctaagagagcgaacgatcaaaagggaagtgccaacgttca 58567  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||||||| | |||||||    
T  58566 tttgaaaagcactgggtgcttgttcctcattga 58534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 979 - 879
Alignment:
Q  40 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattg 139  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||   ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  979 aagagctgtctcttgaatttaacctcgtctaagagagcgaaggatcaaaagggaggtgtcaacgttcatttgaaaagcactgtgtgcttgtccttcattg 880  T
Q  140 a 140  Q
    |    
T  879 a 879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 5359 - 5259
Alignment:
Q  40 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattg 139  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||   ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  5359 aagagctgtctcttgaatttaacctcgtctaagagagcgaaggatcaaaagggaggtgtcaacgttcatttgaaaagcactgtgtgcttgtccttcattg 5260  T
Q  140 a 140  Q
    |    
T  5259 a 5259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 5306 - 5171
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttc 106  Q
    |||||||||||||||| ||||||||||  || || |||| ||||||| ||| |||||||||||||| || |||||||| || |||||||| |||||  ||    
T  5306 aagttgatcagaagatgcaacctgaagtttcaaatagctttctattggattcaacctcgtctaagaaagcgaaagactaaagggaaggtggcaacgactc 5207  T
Q  107 atttgaaaagcactgggtgcttgtacttcattgagt 142  Q
    |||||||||||| ||||||||||| ||||| |||||    
T  5206 atttgaaaagcattgggtgcttgtccttcaatgagt 5171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 59183 - 59299
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||| |||||  ||| || ||||||||| |||||  |||||||||||||||||| ||| ||   ||||||| |||||||||||||    
T  59183 agttgatcagaagattcaatctgaaatctcaaaagagctgtctcttgaagataacctcgtctaagagagcgaaggatcaaaaggaaagtgccaacgttca 59282  T
Q  108 tttgaaaagcactgggt 124  Q
    |||||||||||||||||    
T  59283 tttgaaaagcactgggt 59299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 481692 - 481815
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggt-gccaacgttc 106  Q
    ||||| |||||||||||||||||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || | ||||| || || ||||    
T  481692 aagttaatcagaagattcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaaaggaaaggtggcaaaagttc 481791  T
Q  107 atttgaaaagcactgggtgcttgt 130  Q
    |||||||||||| |||||||||||    
T  481792 atttgaaaagcattgggtgcttgt 481815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 156548 - 156682
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttc 106  Q
    |||||||||||||||| ||||||||||  || || |||||||||||| ||| |||||||||||||| || |||||||| || | |||||| ||||| |||    
T  156548 aagttgatcagaagatgcaacctgaagtttcaaatagctgtctattggattcaacctcgtctaagaaagcgaaagactaaaggaaaggtggcaacgattc 156647  T
Q  107 atttgaaaagcactgggtgcttgtacttcattgag 141  Q
    ||||||| |||  ||||||||||| ||||| ||||    
T  156648 atttgaatagctttgggtgcttgtccttcaatgag 156682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 1084 - 951
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    ||||||||||||||||||| |||||  ||| || ||| ||||| ||||| |||||||||||||||| || ||||||   ||||| || ||||||||||||    
T  1084 agttgatcagaagattcaatctgaaatctcaaaagagttgtctcttgaagttaacctcgtctaagaaagcgaaagatcgaaagggagttgccaacgttca 985  T
Q  108 tttg-aaaagcactgggtgcttgtacttcattga 140  Q
    |||| ||||||||||||||||||| ||| |||||    
T  984 tttgaaaaagcactgggtgcttgtcctttattga 951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 2185 - 2053
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaa-gagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttca 107  Q
    |||||||||||| |||||| |||||  ||| || ||| |||||  |||| |||| |||||||||||||  ||| ||   ||||| |||||||||||||||    
T  2185 agttgatcagaatattcaatctgaaatctcaaaagagttgtctcctgaagttaatctcgtctaagagaacgaaggatcaaaagggaggtgccaacgttca 2086  T
Q  108 tttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||| ||| |||||||||    
T  2085 tttgaaaagcactgggtgcctgtccttcattga 2053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 6444 - 6567
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttc 106  Q
    ||||| |||||||||| ||||||||||  || || |||||| ||||| ||| |||||| ||||||| || |||||||| || | |||||| ||||| |||    
T  6444 aagttcatcagaagatgcaacctgaagtttcaaatagctgtttattggattcaacctcttctaagatagcgaaagactaaaggaaaggtggcaacggttc 6543  T
Q  107 atttgaaaagcactgggtgcttgt 130  Q
    |||||||||||| |||||||||||    
T  6544 atttgaaaagcattgggtgcttgt 6567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 6305 - 6387
Alignment:
Q  58 ttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||||| ||| ||   ||||| | |||||||||||||||||||||||||||||||||||| | |||||||    
T  6305 ttaacctcgtctaagagagcgaaggatcaaaagggaagtgccaacgttcatttgaaaagcactgggtgcttgtccctcattga 6387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1321 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold1321
Description:

Target: scaffold1321; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 857 - 980
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttc 106  Q
    ||||| |||||||||| ||||||||||  || || |||||| ||||| ||| |||||  ||||||| || |||||||| || | |||||| ||||| |||    
T  857 aagttcatcagaagatgcaacctgaagtttcaaatagctgtttattggattcaaccttttctaagatagcgaaagactaaaggaaaggtggcaacggttc 956  T
Q  107 atttgaaaagcactgggtgcttgt 130  Q
    |||||||||||| |||||||||||    
T  957 atttgaaaagcattgggtgcttgt 980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1263 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold1263
Description:

Target: scaffold1263; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 1050 - 1173
Alignment:
Q  8 aagttgatcagaagattcaacctgaagactctaagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttc 106  Q
    ||||| |||||||||| ||||||||||  || || |||||| ||||| ||| |||||  ||||||| || |||||||| || | |||||| ||||| |||    
T  1050 aagttcatcagaagatgcaacctgaagtttcaaatagctgtttattggattcaaccttttctaagatagcgaaagactaaaggaaaggtggcaacggttc 1149  T
Q  107 atttgaaaagcactgggtgcttgt 130  Q
    |||||||||||| |||||||||||    
T  1150 atttgaaaagcattgggtgcttgt 1173  T

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Target: scaffold0154 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 35848 - 35770
Alignment:
Q  62 cctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||  ||| || | ||||| |||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  35848 cctcgtctaagagaacgaaggattaaaagggaggtaccaacgttcatttgaaaagcactgggtgcttgtccttctttga 35770  T

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Target: scaffold0481 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 12765 - 12838
Alignment:
Q  57 tttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgt 130  Q
    ||||| ||||||||||| |  ||| || | ||||| |||| |||||||||||||||||||||||||||||||||    
T  12765 tttaatctcgtctaagaaaacgaaggattaaaagggaggtaccaacgttcatttgaaaagcactgggtgcttgt 12838  T

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Target: scaffold0422 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 11949 - 11820
Alignment:
Q  9 agttgatcagaagattcaacctgaagactctaaga-gctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacg-ttc 106  Q
    |||| |||||||||| ||||||||||  || || | ||||| ||||| ||| |||||| ||||||| ||||||||||| || | |||||| ||||| |||    
T  11949 agttcatcagaagatgcaacctgaagtttcaaataagctgtttattggattcaacctcatctaagaaagagaaagactaaaggaaaggtggcaacgattc 11850  T
Q  107 atttgaaaagcactgggtgcttgtacttca 136  Q
    ||||||||||||  || ||||||| |||||    
T  11849 atttgaaaagcatgggatgcttgtccttca 11820  T

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Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 69911 - 69840
Alignment:
Q  59 taacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgt 130  Q
    ||||||||||| |||||  ||| || | ||||| |||| ||||||||||||| |||||||||||||||||||    
T  69911 taacctcgtctgagagaacgaaggattaaaagggaggtaccaacgttcatttaaaaagcactgggtgcttgt 69840  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 95 - 130
Target Start/End: Original strand, 28774 - 28809
Alignment:
Q  95 gtgccaacgttcatttgaaaagcactgggtgcttgt 130  Q
    ||||||||||||||||||||||||||||||||||||    
T  28774 gtgccaacgttcatttgaaaagcactgggtgcttgt 28809  T

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Target: scaffold0544 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 9826 - 9899
Alignment:
Q  40 aagagctgtctattgaatttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaa 113  Q
    ||||||||||| || || ||||||||||||||||||| ||| ||   ||||| | |||||||||||||||||||    
T  9826 aagagctgtctctttaagttaacctcgtctaagagagcgaaggatcaaaagggaagtgccaacgttcatttgaa 9899  T

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Target: scaffold0410 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 16003 - 15962
Alignment:
Q  99 caacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  16003 caacggtcatttgaaaagcactgggtgcttgtccttcattga 15962  T

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Target: scaffold0163 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 29788 - 29708
Alignment:
Q  60 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttcattga 140  Q
    ||||||||||||||||  ||| ||   ||||||| ||| |||||||| ||||||||||||| ||||||| ||| |||||||    
T  29788 aacctcgtctaagagaccgaaggatcaaaaggaaagtgtcaacgttcgtttgaaaagcacttggtgcttttacctcattga 29708  T

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Target: scaffold0739 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 126
Target Start/End: Complemental strand, 2280 - 2241
Alignment:
Q  87 aaaggaaggtgccaacgttcatttgaaaagcactgggtgc 126  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  2280 aaagggaggtaccaacgttcatttgaaaagcactgggtgc 2241  T

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Target: scaffold0201 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 7544 - 7469
Alignment:
Q  60 aacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactgggtgcttgtacttc 135  Q
    ||||| ||||||||||  |||| | | ||||| ||||  ||||| |||||||||||||||||||||||||| ||||    
T  7544 aaccttgtctaagagaacgaaaaattgaaagggaggtatcaacggtcatttgaaaagcactgggtgcttgtccttc 7469  T

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Target: scaffold0604 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 57 - 1
Alignment:
Q  62 cctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagca 118  Q
    ||||||||||||||  ||| || | ||||| |||| |||||||||||||||||||||    
T  57 cctcgtctaagagaacgaaggattaaaagggaggtaccaacgttcatttgaaaagca 1  T

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Target: scaffold0063 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 15183 - 15119
Alignment:
Q  57 tttaacctcgtctaagagagagaaagactcaaaggaaggtgccaacgttcatttgaaaagcactg 121  Q
    ||||||||||| |||||||  ||| || | ||||| |||| |||||||||||||||||| |||||    
T  15183 tttaacctcgtttaagagaacgaaggattaaaagggaggtaccaacgttcatttgaaaaccactg 15119  T

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