View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17632_low_13 (Length: 332)
Name: NF17632_low_13
Description: NF17632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17632_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 11 - 318
Target Start/End: Original strand, 293572 - 293874
Alignment:
| Q |
11 |
caaaggtgtatgatgagaatgaataattgtattgcttttctagttatgtttatgatcctcaactcaactgatgcttaacttaatgaatactatacaatac |
110 |
Q |
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| T |
293572 |
caaaggtgtatgatgagaataattaattgtattgcttttctagttatgtttatgatcctcaactcaactgatgcttaacttaatgaatactatac----- |
293666 |
T |
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| Q |
111 |
aatacataccttgtcagatgaagcaaacttaaagaaataaaaaagaataatgggccttgctgtctcaagaggctgaacaagaattataaataaatgcttt |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |
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| T |
293667 |
aatacataccttgtcagatgaagcaaacttaaagaaataaaaaagaataatgggccttgctgtctcaagaggcagaacaagaattttaaataaatgcttt |
293766 |
T |
|
| Q |
211 |
gcttttaaaacataaaagtaacactcatatttaaggatggatttcatctcatctcatgtagtctaggttgttgtagttaatccaaacctttaagtcacat |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
293767 |
gcttttaaaacataaaagtaacactcatatttaaggatgaatttcatctcatctcatgtagtctaggttgttgtagttaatccaaacctttaagtcacat |
293866 |
T |
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| Q |
311 |
gaatagtg |
318 |
Q |
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|||||||| |
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| T |
293867 |
gaatagtg |
293874 |
T |
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