View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17632_low_23 (Length: 227)
Name: NF17632_low_23
Description: NF17632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17632_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 17 - 212
Target Start/End: Original strand, 52955172 - 52955367
Alignment:
| Q |
17 |
acttcattatgtttattttgaagtatcacaatatagtccaagtgaaaactaaagcatcgtcccaaaaacagcaaaaaccatcgcatggaagggaattcta |
116 |
Q |
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| T |
52955172 |
acttcattatgtttattttgaagtatcccaatatagtccaagtgaaaactaaagcatcgtcccaaaaacagcaaaaaccatcgcatggaagggaattcta |
52955271 |
T |
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| Q |
117 |
tgaagcctgaatcataaacataaatatacatattgactattgtatcacatgccaatactcggtaggtgttcgttcgcatatatgctccatcgaagt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
52955272 |
tgaagcctgaatcataaacataaatatacatattgactattgtatcacataccaatactcggtaggtgttcgttcacatatatgctccatcgaagt |
52955367 |
T |
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