View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17633_high_13 (Length: 341)
Name: NF17633_high_13
Description: NF17633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17633_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 25 - 333
Target Start/End: Original strand, 26434306 - 26434614
Alignment:
| Q |
25 |
acctatcatccacttcattatgaatcacttgtaaaactaaaagtaatatctgattttctaagaaaaagtgttcgtggcatggtaaataatccacggataa |
124 |
Q |
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| T |
26434306 |
acctatcatccacttcattatgaatcacttgtaaaactaaaagtaatatctgattttctaagaaaaagtgtttgtggcatggtaaataatccacgtatga |
26434405 |
T |
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| Q |
125 |
aggtctaaaatttttacaaagcatgagagatctacatggatatccaagtgggaccaaatagtcaattttctacataaatttgcctcactagattccataa |
224 |
Q |
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|| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
26434406 |
agatctaaaatttttacaaagcatgagagatctacatagatatccaagtgggaccaaatagtcaattttctacagaaatttgcctcactagattccataa |
26434505 |
T |
|
| Q |
225 |
agggtcttatactttcttttcatttagtaataagaacaaatgggaaacctacaaagtactaaattcagaatcatgtgcaaaagctagtaacacagatttt |
324 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |
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| T |
26434506 |
agggtcttatactttcttttcatttagtaataagaacaaatggcaaacctacaaagtactaaattcagaatcatgtgcagaagctagcaacacagatttt |
26434605 |
T |
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| Q |
325 |
cagtggaat |
333 |
Q |
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||||||||| |
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| T |
26434606 |
cagtggaat |
26434614 |
T |
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