View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17633_low_9 (Length: 410)
Name: NF17633_low_9
Description: NF17633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17633_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 10 - 350
Target Start/End: Complemental strand, 27138389 - 27138049
Alignment:
| Q |
10 |
attatacttaaagcatgtagtaattgttaaaatattagtgaatgttcaggaaagaatattgcaataacaactttgctatttaatatgttattaattagca |
109 |
Q |
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| T |
27138389 |
attatacttaaagcatgtagtaattgttaaaatattagtgaatgttcaggaaagaatatttcattaacaactttgaaatttaatatgtcattaattagca |
27138290 |
T |
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| Q |
110 |
atgttgtagcatgtcacttcttgtaacatgtcttatgtcgtagatactttactctgccgctttaatttttagattaattaattaattaatatacgttctt |
209 |
Q |
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| T |
27138289 |
atgttgtagcatgtcacttcttgtaacatgtcttatgtcgtagatactttactctgccgctttaattttctgattaattaattaattactatacgttctt |
27138190 |
T |
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| Q |
210 |
aatatgacacatggctcattagtatgttgatttagacatgatttaagtagggtaggcataagcgacaatccaataacctaattttaaaaggtaccaaagg |
309 |
Q |
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| T |
27138189 |
aatatgacacatggctcattagtatgttgatttagacatgatttaagtagggtagggataagcgacaatccaataacctaattttaaaagttaccaaagg |
27138090 |
T |
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| Q |
310 |
ttgtggaatgttgctatttattagataatgttgttttgcag |
350 |
Q |
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| T |
27138089 |
ttgtggaatgttgctatttattagataatattgttttgcag |
27138049 |
T |
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