View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17635_low_43 (Length: 284)
Name: NF17635_low_43
Description: NF17635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17635_low_43 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 10928763 - 10929031
Alignment:
| Q |
1 |
cagtgacctcaacttattatagctggagatttt-gttatcagtctgccaag-cagccacctcttttaatgatgttaggccgatttctacttcattgttag |
98 |
Q |
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| T |
10928763 |
cagtgacctcaacttattaaatctggagatttttgttatcagcctgccaaggcagccacctcttttaatgatgttaggccgatttctacttcattgttag |
10928862 |
T |
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| Q |
99 |
tgttgaacatttgattagttagctctgttgatggtctcgtaattggatctatcctctcactatcatttttagttgttaattttaactgatcctcactagg |
198 |
Q |
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|||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10928863 |
tgtttaacatttgattagttagctctgttgatggtctcataattggatctatcctctcactatcatttttagttgttaattttaactgatcctcactagg |
10928962 |
T |
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| Q |
199 |
-nnnnnnncttttacaaatgaactacagaacggtgctacgacggattttgaagtaaggcttggagcatg |
266 |
Q |
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|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |
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| T |
10928963 |
ttttttttcttttacaaatgaactacagaatgttgctacgacggattttgaagtaaggcttggagcatg |
10929031 |
T |
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