View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17637_low_1 (Length: 724)
Name: NF17637_low_1
Description: NF17637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17637_low_1 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 342; Significance: 0; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 20 - 377
Target Start/End: Original strand, 2293971 - 2294328
Alignment:
| Q |
20 |
ggacggttatttggtgcctaaaaacgggacggtgaatttcttgctggcggagatggcgttggatcctcgtgtttgggaggacccattggagtttaagcca |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
2293971 |
ggacggttatttggtgcctaaaaacgggacggtgaatttcttgctggcggagatggcgttggatcctcgtgtttgggaggacccgttggagtttaagcca |
2294070 |
T |
|
| Q |
120 |
gaaaggtttttgaaggatgagacttttgacattacaggaagtaaagagataaagatgatgccgtttggagctggaagaagaatttgtcccggacttaatt |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2294071 |
gaaaggtttttgaaggatgagacttttgacattacaggaagtaaagagataaagatgatgccgtttggagctggaagaagaatttgtcccggacttaatt |
2294170 |
T |
|
| Q |
220 |
tagctttgctccatttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagagggcgggcatgttgatttgacggaaatacaaga |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2294171 |
tagctttgctccatttggaatattttgtggctaacttggtttggaatttcgattggaaggttccagagggcgggcatgttgatttgacggaaatacaaga |
2294270 |
T |
|
| Q |
320 |
attcactatggtgatgaaaaatccattgcaagttcatatttctcctaggacatagatt |
377 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
2294271 |
attcaccatggtgatgaaaaatccattgcaagttcatatttctcctaggatatagatt |
2294328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 20 - 377
Target Start/End: Original strand, 2310302 - 2310659
Alignment:
| Q |
20 |
ggacggttatttggtgcctaaaaacgggacggtgaatttcttgctggcggagatggcgttggatcctcgtgtttgggaggacccattggagtttaagcca |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2310302 |
ggacggttatttggtgcctaaaaacgggacggtgaatttctttctggcggagatggcgttggatcgtcgtgtttgggaggacccattggagtttaagcca |
2310401 |
T |
|
| Q |
120 |
gaaaggtttttgaaggatgagacttttgacattacaggaagtaaagagataaagatgatgccgtttggagctggaagaagaatttgtcccggacttaatt |
219 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2310402 |
gaaaggtttttgaaggatgagacttttgtcattccaggaagtaaagagataaagatgatgccgtttggagctggaagaagaatttgtcccggacttaatt |
2310501 |
T |
|
| Q |
220 |
tagctttgctccatttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagagggcgggcatgttgatttgacggaaatacaaga |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2310502 |
tagctttgctccatttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagagggcgggcatgttgatttgacggaaatacaaga |
2310601 |
T |
|
| Q |
320 |
attcactatggtgatgaaaaatccattgcaagttcatatttctcctaggacatagatt |
377 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
2310602 |
attcactatggtgatgaaaaatccagtgcaagttcatatttctcctaggatatagatt |
2310659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 424 - 724
Target Start/End: Original strand, 2294375 - 2294671
Alignment:
| Q |
424 |
aaccaccctagattctctgcctgagaatgtcataacacagcaggggagtattatatgtggatttgtcatatggtgggattttgtttcatataatgatccc |
523 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2294375 |
aaccaccctagattctctgcttgagaatgtcataacacagcaggggagtattatatgtggatttgtcatatggtgggattttgtttcatataatgatccg |
2294474 |
T |
|
| Q |
524 |
ttatgcatacatatatatgccttcacatatgttattgttctttcttatatatcttgtttcctgtataaataaaaactttgcctgtcattcttgtaagtca |
623 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2294475 |
ttatgcata----tatatgccttcacatatgttattgttctttcttatatatcttgtttcctgtataaataaaaactttgcctgtcattcttgtaagtca |
2294570 |
T |
|
| Q |
624 |
agatactttcattgtaaaaatatatgatctttgttgtagtaatattgaagttggtttattttgttaatctgtttggtcttggcggttatagattatgttt |
723 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2294571 |
agatactttcattgtaaaaatatatgatctttgttgtagtaatattgaagttggtttattttgttaatctgtttggtcttggcggttatagattatgttt |
2294670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 22 - 377
Target Start/End: Original strand, 2303586 - 2303941
Alignment:
| Q |
22 |
acggttatttggtgcctaaaaacgggacggtgaatttcttgctggcggagatggcgttggatcctcgtgtttgggaggacccattggagtttaagccaga |
121 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || ||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
2303586 |
acggttatttggtgcctaaaaatgggacggtgaatttcatgctggcggagatggggtgggatcctcgtgtttgggaggatccaatggagtttaagccaga |
2303685 |
T |
|
| Q |
122 |
aaggtttttgaaggatgagacttttgacattacaggaagtaaagagataaagatgatgccgtttggagctggaagaagaatttgtcccggacttaattta |
221 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||| ||||| ||| ||||||||||| | |||||||||| |
|
|
| T |
2303686 |
aaggttttggaaggatgagaattttgacattacagggagtaaggagataaagatgatgccgtttgaagctgaaaggagaatttgtcctgcacttaattta |
2303785 |
T |
|
| Q |
222 |
gctttgctccatttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagagggcgggcatgttgatttgacggaaatacaagaat |
321 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||| |
|
|
| T |
2303786 |
gctttgctccatttagaatattttgtggctaatttggtttggaatttcgattggaagcttccagagggcggctatgttgatttgtcggaaaaacaagaat |
2303885 |
T |
|
| Q |
322 |
tcactatggtgatgaaaaatccattgcaagttcatatttctcctaggacatagatt |
377 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
2303886 |
tcaatatggtgatgaaaaatccattgcaagttcatatttctcctaggatatagatt |
2303941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 22 - 377
Target Start/End: Original strand, 2321288 - 2321643
Alignment:
| Q |
22 |
acggttatttggtgcctaaaaacgggacggtgaatttcttgctggcggagatggcgttggatcctcgtgtttgggaggacccattggagtttaagccaga |
121 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
2321288 |
acggttatttggtgcctaaaaatgggacggtgaatttcatgctgtcggagatggcgtgggatcctcgtgtttgggaggatccaatggagtttaagccaga |
2321387 |
T |
|
| Q |
122 |
aaggtttttgaaggatgagacttttgacattacaggaagtaaagagataaagatgatgccgtttggagctggaagaagaatttgtcccggacttaattta |
221 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
2321388 |
aaggtttttgaaggatgagacttttgatattatagggagtaaagagataaagatgatgccgtttggagctggaaggagaatttgtcccggacttaattta |
2321487 |
T |
|
| Q |
222 |
gctttgctccatttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagagggcgggcatgttgatttgacggaaatacaagaat |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||| ||||| || |||| ||||| || |||||||||||| |||||| | | |||| |
|
|
| T |
2321488 |
gctttgctccatttggaatattttgtggctaacttggtttggaatttcaattggcagcttccggagggtggccatgttgatttgtcggaaaaagatgaat |
2321587 |
T |
|
| Q |
322 |
tcactatggtgatgaaaaatccattgcaagttcatatttctcctaggacatagatt |
377 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
2321588 |
tcactatggtgatgaaaaatccattgcaagttcatatttctcctagggtatagatt |
2321643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 24 - 377
Target Start/End: Original strand, 2327143 - 2327496
Alignment:
| Q |
24 |
ggttatttggtgcctaaaaacgggacggtgaatttcttgctggcggagatggcgttggatcctcgtgtttgggaggacccattggagtttaagccagaaa |
123 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| || |||| ||||||| |||||||||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
2327143 |
ggttatttggtgcctaaaaatgggacggtgaatttcatggtggcagagatggggttggatcctcgtgtttgggaggatccaatggagtttaagccagaaa |
2327242 |
T |
|
| Q |
124 |
ggtttttgaaggatgagacttttgacattacaggaagtaaagagataaagatgatgccgtttggagctggaagaagaatttgtcccggacttaatttagc |
223 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| || ||||||||||| ||| ||||||||| |
|
|
| T |
2327243 |
ggtttttgaaggatgagacttttgatattacagggagtaaagagatcaagatgatgccgtttggagctggtaggagaatttgtccgggatataatttagc |
2327342 |
T |
|
| Q |
224 |
tttgctccatttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagagggcgggcatgttgatttgacggaaatacaagaattc |
323 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| |||||| | |||| | |||||| |
|
|
| T |
2327343 |
tttactccatttggaatattttgtggctaatttggtttggaatttcgattggaaggttccggagggtggccatgtcgatttgtcagaaaaatttgaattc |
2327442 |
T |
|
| Q |
324 |
actatggtgatgaaaaatccattgcaagttcatatttctcctaggacatagatt |
377 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||| ||| | ||||||| |
|
|
| T |
2327443 |
accgtggtgatgaaaaatccattgcaagttcatatttctcatagaatatagatt |
2327496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 22 - 374
Target Start/End: Original strand, 2351162 - 2351514
Alignment:
| Q |
22 |
acggttatttggtgcctaaaaacgggacggtgaatttcttgctggcggagatggcgttggatcctcgtgtttgggaggacccattggagtttaagccaga |
121 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||||| || |||| ||||||| || ||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
2351162 |
acggttatttggtgcctaaaaatgggacggtcaattttatggtggcagagatggggtgggatcctcgtgtttgggaggatccaatggagtttaagccaga |
2351261 |
T |
|
| Q |
122 |
aaggtttttgaaggatgagacttttgacattacaggaagtaaagagataaagatgatgccgtttggagctggaagaagaatttgtcccggacttaattta |
221 |
Q |
| |
|
||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||| ||||| | ||| || ||||| ||||||||| ||||||| |
|
|
| T |
2351262 |
gaggtttttgaaggatgaaacatttgacattacggggagtaaagagataaagatgatgccatttggtgttggtaggagaatctgtcccggatataattta |
2351361 |
T |
|
| Q |
222 |
gctttgctccatttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagagggcgggcatgttgatttgacggaaatacaagaat |
321 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||| |||||||| |
|
|
| T |
2351362 |
gctttgcttcacttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagaaggtgggcatgttgatttgtcggaaaaacaagaat |
2351461 |
T |
|
| Q |
322 |
tcactatggtgatgaaaaatccattgcaagttcatatttctcctaggacatag |
374 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
2351462 |
tcactgtggtgatgaaaaatccattgcaagttcgtatttctcctaggatatag |
2351514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 24 - 369
Target Start/End: Original strand, 2330858 - 2331203
Alignment:
| Q |
24 |
ggttatttggtgcctaaaaacgggacggtgaatttcttgctggcggagatggcgttggatcctcgtgtttgggaggacccattggagtttaagccagaaa |
123 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||| || | || ||||||| |||||| ||||||||||||||||| ||| |||| ||||||||||||| |
|
|
| T |
2330858 |
ggttatttggtgcctaaagatgggacggtgaattttatggttgcagagatggggttggaccctcgtgtttgggaggatccaatggaatttaagccagaaa |
2330957 |
T |
|
| Q |
124 |
ggtttttgaaggatgagacttttgacattacaggaagtaaagagataaagatgatgccgtttggagctggaagaagaatttgtcccggacttaatttagc |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||| ||||||||| |
|
|
| T |
2330958 |
ggtttttgaaggatgagacttttgacattacaggaagtaaagagataaagatgatgccatttggagctgggaggagaatttgtcctggatataatttagc |
2331057 |
T |
|
| Q |
224 |
tttgctccatttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagagggcgggcatgttgatttgacggaaatacaagaattc |
323 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | ||||||||| | || | ||| |||||| |
|
|
| T |
2331058 |
tttgcttcatttggaatattttgtggctaatttggtttggaatttcgattggaaggttcccgagggtggtcgcgttgatttgtcagagaaacaggaattc |
2331157 |
T |
|
| Q |
324 |
actatggtgatgaaaaatccattgcaagttcatatttctcctagga |
369 |
Q |
| |
|
|||||||| ||||||||||||||||| | |||||||||||| |||| |
|
|
| T |
2331158 |
actatggtcatgaaaaatccattgcaggctcatatttctccaagga |
2331203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 424 - 686
Target Start/End: Original strand, 2321687 - 2321932
Alignment:
| Q |
424 |
aaccaccctagattctctgcctgagaatgtcataacacagcaggggagtattatatgtggatttgtcatatggtgggattttgtttcatataatgatccc |
523 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||| ||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
2321687 |
aaccactctagattctctgcttgagaatgtcataacacaacaggggaatattatatgtggatttctcatatggtcggattttgtttcatacaatgatccc |
2321786 |
T |
|
| Q |
524 |
ttatgcatacatatatatgccttcacatatgttattgttctttcttatatatcttgtttcctgtataaataaaaactttgcctgtcattcttgtaagtca |
623 |
Q |
| |
|
|||||||||||| ||||||||| || ||||||||||||||||||| |||||||| ||||| || ||||||||||||||||||| |
|
|
| T |
2321787 |
ttatgcatacattcatatgcctt-ac---------------ttcttatatatcttgtttcttgtataaaataaaac-atgtctgtcattcttgtaagtca |
2321869 |
T |
|
| Q |
624 |
agatactttcattgta-aaaatatatgatctttgttgtagtaatattgaagttggtttattttg |
686 |
Q |
| |
|
||||||||||| |||| |||| |||||||| ||||| | ||||||| |||||| ||||||||| |
|
|
| T |
2321870 |
agatactttcaatgtataaaaaatatgatc-ttgtttttgtaatatcaaagttgttttattttg |
2321932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 424 - 487
Target Start/End: Original strand, 2303983 - 2304046
Alignment:
| Q |
424 |
aaccaccctagattctctgcctgagaatgtcataacacagcaggggagtattatatgtggattt |
487 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||||||||||||| | | |||||||||||||||| |
|
|
| T |
2303983 |
aaccactctagattctctgcttgagaatgtcataacacagcaaagaaatattatatgtggattt |
2304046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 671 - 709
Target Start/End: Original strand, 2321971 - 2322009
Alignment:
| Q |
671 |
aagttggtttattttgttaatctgtttggtcttggcggt |
709 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2321971 |
aagttggtttattttgttaatctgtttggtcttgacggt |
2322009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 424 - 537
Target Start/End: Original strand, 2327575 - 2327685
Alignment:
| Q |
424 |
aaccaccctagattctctgcctgagaatgtcataacacagcaggggagtattatatgtggatttgtcatat-ggtgggattttgtttcatataatgatcc |
522 |
Q |
| |
|
||||| |||||||||||| | || |||||||||||||||| ||| |||||||||| ||||||||| || ||| ||||||| |||||| || ||||| |
|
|
| T |
2327575 |
aaccatcctagattctct-cttggcaatgtcataacacagc---ggaatattatatgtagatttgtcacattggtaagattttgcttcatacaacgatcc |
2327670 |
T |
|
| Q |
523 |
cttatgcatacatat |
537 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
2327671 |
attatgcatacatat |
2327685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 454 - 537
Target Start/End: Original strand, 2331305 - 2331388
Alignment:
| Q |
454 |
cataacacagcaggggagtattatatgtggatttgtcatatggtgggattttgtttcatataatgatcccttatgcatacatat |
537 |
Q |
| |
|
|||| |||||||||||| ||||| | |||||||| |||||| ||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
2331305 |
catatcacagcaggggaagattatccgcagatttgtccgatggtgtgattttgtttcatcaaatgatcacttatgcatacatat |
2331388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 143; Significance: 1e-74; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 88 - 369
Target Start/End: Original strand, 41127234 - 41127518
Alignment:
| Q |
88 |
gtgtttgggaggacccattggagtttaagccagaaaggtttttgaaggatgagacttttgacattacaggaagtaaagagataaagatgatgccgtttgg |
187 |
Q |
| |
|
|||||||||| || |||||||||||||| |||||||||||||||||||||||| ||||||| ||||| || | ||||||||||||||||||||||||||| |
|
|
| T |
41127234 |
gtgtttgggaagatccattggagtttaaaccagaaaggtttttgaaggatgaggcttttgatattaccgggactaaagagataaagatgatgccgtttgg |
41127333 |
T |
|
| Q |
188 |
agctggaagaagaatttgtcccggacttaatttagctttgctccatttggaatattttgtggctaatttggtttggaatttcgattggaaggttccagag |
287 |
Q |
| |
|
|| ||| || ||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| ||| |||| |
|
|
| T |
41127334 |
agttgggaggagaatttgtcctggatataatttagctttgctccatttggaatactttgtggctaatttggtctggaattttaattggaagattctagag |
41127433 |
T |
|
| Q |
288 |
gg---cgggcatgttgatttgacggaaatacaagaattcactatggtgatgaaaaatccattgcaagttcatatttctcctagga |
369 |
Q |
| |
|
|| || ||||||||||| |||||| | |||||||| |||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
41127434 |
ggagctggttatgttgatttgtcggaaaaaactgaattcaccgtggttatgaaaaatccactgcaagttcatatttctcctagga |
41127518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 278
Target Start/End: Original strand, 26494893 - 26495009
Alignment:
| Q |
162 |
aaagagataaagatgatgccgtttggagctggaagaagaatttgtcccggacttaatttagctttgctccatttggaatattttgtggctaatttggttt |
261 |
Q |
| |
|
||||||||||||||||||||||||||||| || || || |||||||| | ||| || || |||||||||| ||||| ||||| ||||||||||||| |
|
|
| T |
26494893 |
aaagagataaagatgatgccgtttggagcagggaggaggatttgtcctgcctataaattggcaatgctccatttagaatactttgttgctaatttggttt |
26494992 |
T |
|
| Q |
262 |
ggaatttcgattggaag |
278 |
Q |
| |
|
||| || || |||||| |
|
|
| T |
26494993 |
tgaactttgagtggaag |
26495009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 369
Target Start/End: Original strand, 26507056 - 26507130
Alignment:
| Q |
295 |
atgttgatttgacggaaatacaagaattcactatggtgatgaaaaatccattgcaagttcatatttctcctagga |
369 |
Q |
| |
|
||||||||||| | |||| ||| ||||| ||||||||||||||| |||||||| ||| ||| || |||||||||| |
|
|
| T |
26507056 |
atgttgatttgtcagaaaaacaggaatttactatggtgatgaaatatccattggaagctcaaatatctcctagga |
26507130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 55017070 - 55017133
Alignment:
| Q |
145 |
ttgacattacaggaagtaaagagataaagatgatgccgtttggagctggaagaagaatttgtcc |
208 |
Q |
| |
|
|||| |||||||||| ||||||||| ||||||||||||||||| ||||| || || |||||||| |
|
|
| T |
55017070 |
ttgatattacaggaactaaagagatgaagatgatgccgtttggtgctgggaggaggatttgtcc |
55017133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 277
Target Start/End: Complemental strand, 15176405 - 15176287
Alignment:
| Q |
159 |
agtaaagagataaagatgatgccgtttggagctggaagaagaatttgtcccggacttaatttagctttgctccatttggaatattttgtggctaatttgg |
258 |
Q |
| |
|
||||||||||||||||||||||| |||||||| || || ||||| ||||| || | |||||| ||| | || |||||||| ||||| || ||||| | |
|
|
| T |
15176405 |
agtaaagagataaagatgatgccatttggagcagggaggagaatgtgtcctggctatggtttagcattgttgcacttggaatactttgttgccaattttg |
15176306 |
T |
|
| Q |
259 |
tttggaatttcgattggaa |
277 |
Q |
| |
|
||| |||||| || ||||| |
|
|
| T |
15176305 |
ttttgaattttgagtggaa |
15176287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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