View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17638_high_6 (Length: 457)

Name: NF17638_high_6
Description: NF17638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17638_high_6
NF17638_high_6
[»] chr4 (63 HSPs)
chr4 (51-281)||(8826237-8826467)
chr4 (311-445)||(20745333-20745467)
chr4 (311-445)||(47866048-47866182)
chr4 (311-440)||(20459247-20459376)
chr4 (311-444)||(43020768-43020901)
chr4 (311-445)||(3043804-3043938)
chr4 (311-445)||(42804268-42804402)
chr4 (311-445)||(20956902-20957036)
chr4 (311-445)||(55190668-55190802)
chr4 (311-445)||(40780251-40780383)
chr4 (311-437)||(27841844-27841969)
chr4 (311-445)||(30191908-30192043)
chr4 (311-445)||(48361064-48361199)
chr4 (311-442)||(48195902-48196034)
chr4 (312-445)||(16412247-16412381)
chr4 (313-451)||(44111740-44111879)
chr4 (311-421)||(53225669-53225780)
chr4 (313-442)||(25477549-25477679)
chr4 (372-433)||(34226400-34226461)
chr4 (380-445)||(53225726-53225791)
chr4 (374-445)||(20114135-20114206)
chr4 (311-361)||(41116574-41116624)
chr4 (313-425)||(15170897-15171010)
chr4 (313-445)||(36132636-36132769)
chr4 (313-445)||(50121451-50121584)
chr4 (311-445)||(31227272-31227407)
chr4 (311-361)||(42169129-42169179)
chr4 (316-361)||(24100776-24100821)
chr4 (316-361)||(24100890-24100935)
chr4 (380-445)||(38687993-38688058)
chr4 (311-435)||(42670776-42670901)
chr4 (312-361)||(43117940-43117989)
chr4 (378-442)||(18135393-18135457)
chr4 (380-448)||(31854461-31854529)
chr4 (312-443)||(53658367-53658499)
chr4 (311-362)||(2643620-2643671)
chr4 (311-358)||(8826779-8826826)
chr4 (314-361)||(39993124-39993171)
chr4 (311-361)||(8347657-8347707)
chr4 (311-388)||(9894637-9894715)
chr4 (313-347)||(23226964-23226998)
chr4 (312-413)||(26066382-26066484)
chr4 (311-361)||(40780262-40780312)
chr4 (374-444)||(45828491-45828561)
chr4 (311-361)||(45828501-45828551)
chr4 (313-440)||(52535965-52536093)
chr4 (380-442)||(53621410-53621472)
chr4 (316-361)||(2401053-2401098)
chr4 (316-361)||(11796666-11796711)
chr4 (324-361)||(21587000-21587037)
chr4 (380-445)||(23125647-23125712)
chr4 (316-361)||(26636522-26636567)
chr4 (312-361)||(34226400-34226449)
chr4 (380-441)||(35328944-35329005)
chr4 (380-445)||(39877404-39877469)
chr4 (316-361)||(46518502-46518547)
chr4 (313-361)||(4386150-4386198)
chr4 (378-442)||(4758857-4758921)
chr4 (311-445)||(32714270-32714405)
chr4 (334-445)||(45096609-45096721)
chr4 (381-445)||(48361053-48361117)
chr4 (317-361)||(54357976-54358020)
chr4 (380-444)||(54611976-54612040)
[»] chr2 (70 HSPs)
chr2 (311-445)||(45571042-45571176)
chr2 (311-445)||(45574709-45574843)
chr2 (311-445)||(45578376-45578510)
chr2 (311-445)||(45582043-45582177)
chr2 (311-445)||(45585710-45585844)
chr2 (311-445)||(45589377-45589511)
chr2 (311-445)||(45593044-45593178)
chr2 (311-445)||(45596711-45596845)
chr2 (311-445)||(45600378-45600512)
chr2 (311-445)||(45604045-45604179)
chr2 (311-445)||(45607712-45607846)
chr2 (311-445)||(45611379-45611513)
chr2 (311-445)||(45615046-45615180)
chr2 (311-445)||(45034410-45034544)
chr2 (311-445)||(4044576-4044710)
chr2 (312-445)||(4063285-4063418)
chr2 (314-440)||(15384442-15384568)
chr2 (312-442)||(3838422-3838552)
chr2 (312-442)||(11030196-11030327)
chr2 (311-445)||(20555270-20555404)
chr2 (313-445)||(9152380-9152513)
chr2 (312-445)||(12486005-12486139)
chr2 (310-445)||(11794460-11794596)
chr2 (311-445)||(38983000-38983135)
chr2 (311-441)||(40430678-40430809)
chr2 (313-445)||(12962719-12962852)
chr2 (314-437)||(32457222-32457346)
chr2 (311-437)||(38554467-38554594)
chr2 (311-445)||(43713975-43714109)
chr2 (313-445)||(20427002-20427135)
chr2 (311-433)||(43135044-43135158)
chr2 (311-428)||(41153129-41153247)
chr2 (311-442)||(7943443-7943576)
chr2 (311-442)||(6761469-6761601)
chr2 (317-432)||(7833300-7833416)
chr2 (311-445)||(30761390-30761525)
chr2 (311-361)||(5109375-5109425)
chr2 (311-361)||(12486078-12486128)
chr2 (312-413)||(28248966-28249068)
chr2 (313-362)||(5559377-5559426)
chr2 (311-435)||(22333536-22333661)
chr2 (313-445)||(29988906-29989039)
chr2 (380-445)||(41260026-41260091)
chr2 (313-442)||(44737297-44737426)
chr2 (311-442)||(7765806-7765938)
chr2 (311-442)||(16241279-16241411)
chr2 (381-445)||(25795321-25795385)
chr2 (311-442)||(25891956-25892088)
chr2 (317-361)||(44274623-44274667)
chr2 (383-445)||(7943524-7943587)
chr2 (311-445)||(29866083-29866218)
chr2 (311-445)||(42263482-42263617)
chr2 (311-445)||(45065592-45065727)
chr2 (316-358)||(43714133-43714175)
chr2 (317-438)||(3037741-3037865)
chr2 (316-361)||(4755479-4755524)
chr2 (380-441)||(5109368-5109429)
chr2 (325-445)||(11711350-11711471)
chr2 (316-361)||(11726577-11726622)
chr2 (316-361)||(15119790-15119835)
chr2 (387-428)||(26194307-26194348)
chr2 (314-355)||(27251437-27251478)
chr2 (380-445)||(27596731-27596796)
chr2 (312-412)||(35728499-35728600)
chr2 (312-361)||(43135109-43135158)
chr2 (316-361)||(45472423-45472468)
chr2 (314-366)||(13021716-13021768)
chr2 (317-361)||(32346092-32346136)
chr2 (317-361)||(41824342-41824386)
chr2 (313-361)||(42698150-42698198)
[»] chr8 (56 HSPs)
chr8 (311-445)||(6899432-6899566)
chr8 (311-445)||(12958788-12958922)
chr8 (311-445)||(44796354-44796488)
chr8 (311-445)||(36366026-36366160)
chr8 (311-454)||(22429547-22429690)
chr8 (311-445)||(35011224-35011360)
chr8 (311-445)||(24177984-24178118)
chr8 (313-442)||(42786378-42786506)
chr8 (311-442)||(32575183-32575318)
chr8 (311-421)||(24915195-24915305)
chr8 (311-445)||(10839775-10839909)
chr8 (311-435)||(5031476-5031601)
chr8 (311-442)||(13831367-13831497)
chr8 (314-442)||(16448793-16448922)
chr8 (311-445)||(7693034-7693169)
chr8 (374-445)||(10396793-10396864)
chr8 (323-445)||(42122967-42123090)
chr8 (311-411)||(6354682-6354783)
chr8 (311-439)||(35149675-35149804)
chr8 (322-445)||(3236353-3236477)
chr8 (313-361)||(10184637-10184685)
chr8 (311-445)||(2339291-2339426)
chr8 (311-445)||(7693045-7693180)
chr8 (311-445)||(29563659-29563794)
chr8 (311-445)||(41915595-41915730)
chr8 (313-442)||(8803242-8803372)
chr8 (311-357)||(15726849-15726895)
chr8 (380-442)||(30924003-30924065)
chr8 (383-445)||(43932134-43932196)
chr8 (311-442)||(15720211-15720344)
chr8 (311-443)||(22781885-22782018)
chr8 (316-361)||(24418962-24419007)
chr8 (317-361)||(195679-195723)
chr8 (317-361)||(310516-310560)
chr8 (313-361)||(34711095-34711143)
chr8 (311-445)||(8453596-8453730)
chr8 (311-445)||(34028384-34028519)
chr8 (312-376)||(39149644-39149704)
chr8 (380-442)||(2229152-2229214)
chr8 (384-442)||(10839767-10839825)
chr8 (316-362)||(18959254-18959300)
chr8 (311-361)||(24822809-24822859)
chr8 (383-445)||(34745258-34745320)
chr8 (311-361)||(36366037-36366087)
chr8 (383-445)||(43292569-43292631)
chr8 (316-361)||(5888349-5888394)
chr8 (316-361)||(13841861-13841906)
chr8 (316-361)||(24820379-24820424)
chr8 (383-444)||(24822808-24822869)
chr8 (312-361)||(40465324-40465373)
chr8 (316-361)||(43932135-43932180)
chr8 (380-444)||(12270138-12270202)
chr8 (397-445)||(13013971-13014019)
chr8 (317-361)||(22193646-22193690)
chr8 (311-418)||(40465250-40465358)
chr8 (311-454)||(43295075-43295218)
[»] chr7 (56 HSPs)
chr7 (311-445)||(4826774-4826908)
chr7 (311-445)||(27231835-27231969)
chr7 (311-445)||(32811379-32811513)
chr7 (313-442)||(1366599-1366728)
chr7 (313-435)||(31227507-31227629)
chr7 (323-433)||(42456993-42457103)
chr7 (313-445)||(28020002-28020133)
chr7 (311-445)||(28677318-28677453)
chr7 (311-445)||(36245377-36245512)
chr7 (311-445)||(11668016-11668151)
chr7 (335-418)||(49069080-49069163)
chr7 (315-441)||(45441441-45441568)
chr7 (313-445)||(41850610-41850743)
chr7 (311-428)||(8566099-8566217)
chr7 (311-441)||(2523775-2523906)
chr7 (316-442)||(45533247-45533374)
chr7 (317-430)||(16861530-16861642)
chr7 (311-438)||(29365629-29365757)
chr7 (311-410)||(30869222-30869322)
chr7 (313-445)||(13807256-13807385)
chr7 (311-441)||(24163280-24163412)
chr7 (311-445)||(5347735-5347869)
chr7 (383-438)||(16861520-16861575)
chr7 (311-425)||(40142794-40142909)
chr7 (311-420)||(3411358-3411468)
chr7 (311-445)||(10007575-10007712)
chr7 (316-445)||(33901039-33901169)
chr7 (332-428)||(2399970-2400067)
chr7 (312-361)||(4925904-4925953)
chr7 (316-361)||(8169178-8169223)
chr7 (313-445)||(12763230-12763363)
chr7 (380-445)||(29365703-29365768)
chr7 (314-358)||(32811798-32811842)
chr7 (381-445)||(41088853-41088917)
chr7 (313-361)||(43174299-43174347)
chr7 (334-414)||(48634205-48634285)
chr7 (311-445)||(20397816-20397951)
chr7 (383-445)||(24163269-24163332)
chr7 (311-445)||(35427671-35427806)
chr7 (383-445)||(10007661-10007723)
chr7 (311-361)||(28020013-28020063)
chr7 (311-361)||(32811390-32811440)
chr7 (384-445)||(2523856-2523917)
chr7 (314-414)||(3374405-3374506)
chr7 (316-361)||(10095732-10095777)
chr7 (320-361)||(21113294-21113335)
chr7 (381-422)||(29559520-29559561)
chr7 (316-361)||(34840627-34840672)
chr7 (317-361)||(8595161-8595205)
chr7 (324-411)||(21393312-21393400)
chr7 (329-361)||(28409598-28409630)
chr7 (380-424)||(28936076-28936120)
chr7 (311-426)||(29770342-29770458)
chr7 (313-440)||(30866251-30866379)
chr7 (311-445)||(39153299-39153432)
chr7 (376-428)||(48445978-48446030)
[»] chr1 (68 HSPs)
chr1 (311-445)||(47678257-47678391)
chr1 (311-445)||(43929347-43929481)
chr1 (312-445)||(34662695-34662828)
chr1 (311-445)||(47844546-47844680)
chr1 (311-442)||(49944845-49944977)
chr1 (311-445)||(519834-519969)
chr1 (311-445)||(38040277-38040412)
chr1 (311-445)||(26924225-26924360)
chr1 (312-442)||(38590070-38590203)
chr1 (313-442)||(44939070-44939200)
chr1 (313-441)||(26070838-26070967)
chr1 (311-435)||(38737942-38738067)
chr1 (311-444)||(26760175-26760309)
chr1 (313-447)||(8971242-8971377)
chr1 (317-443)||(34332494-34332621)
chr1 (311-428)||(37515108-37515226)
chr1 (316-445)||(51590431-51590561)
chr1 (316-361)||(10256794-10256839)
chr1 (317-361)||(5431422-5431466)
chr1 (313-440)||(6793608-6793736)
chr1 (311-442)||(9301931-9302063)
chr1 (311-442)||(10065267-10065399)
chr1 (311-438)||(23923562-23923690)
chr1 (375-435)||(34146881-34146941)
chr1 (313-361)||(45848953-45849001)
chr1 (311-439)||(47912824-47912950)
chr1 (311-358)||(29892219-29892266)
chr1 (375-442)||(49184243-49184310)
chr1 (311-361)||(50155384-50155434)
chr1 (316-361)||(1409131-1409176)
chr1 (315-438)||(11386170-11386294)
chr1 (313-433)||(26545010-26545131)
chr1 (313-361)||(5368856-5368904)
chr1 (311-347)||(7375569-7375605)
chr1 (378-442)||(9548676-9548740)
chr1 (311-442)||(14281594-14281726)
chr1 (313-361)||(25021245-25021293)
chr1 (311-358)||(26823149-26823196)
chr1 (311-441)||(29256606-29256734)
chr1 (316-358)||(6340655-6340697)
chr1 (311-361)||(23923406-23923456)
chr1 (311-440)||(28359083-28359213)
chr1 (311-361)||(34146890-34146940)
chr1 (380-442)||(38830487-38830549)
chr1 (313-346)||(640536-640569)
chr1 (316-353)||(5431354-5431391)
chr1 (316-361)||(6079145-6079190)
chr1 (324-361)||(6156655-6156692)
chr1 (316-361)||(19175670-19175715)
chr1 (312-361)||(25021317-25021366)
chr1 (316-361)||(25554556-25554601)
chr1 (316-349)||(28038840-28038873)
chr1 (380-445)||(28989273-28989338)
chr1 (316-361)||(34597533-34597578)
chr1 (316-353)||(39940576-39940613)
chr1 (380-445)||(47911927-47911992)
chr1 (317-361)||(1811277-1811321)
chr1 (397-445)||(2351134-2351182)
chr1 (325-361)||(7230031-7230067)
chr1 (316-356)||(18744576-18744616)
chr1 (327-442)||(23398084-23398200)
chr1 (313-361)||(27819398-27819446)
chr1 (378-442)||(29312443-29312507)
chr1 (393-445)||(29892225-29892277)
chr1 (317-361)||(34597595-34597639)
chr1 (313-361)||(47883977-47884025)
chr1 (311-355)||(47946013-47946057)
chr1 (374-442)||(50155374-50155442)
[»] chr5 (54 HSPs)
chr5 (311-445)||(29031038-29031172)
chr5 (311-445)||(22731260-22731394)
chr5 (312-445)||(1015157-1015290)
chr5 (311-445)||(15968323-15968457)
chr5 (311-441)||(27488359-27488489)
chr5 (313-445)||(26327549-26327682)
chr5 (313-441)||(1138223-1138351)
chr5 (311-445)||(38394440-38394575)
chr5 (312-445)||(13789733-13789867)
chr5 (311-444)||(5002142-5002276)
chr5 (311-437)||(18473487-18473614)
chr5 (315-445)||(33478121-33478254)
chr5 (311-442)||(1643348-1643480)
chr5 (313-445)||(22101922-22102055)
chr5 (313-361)||(36434764-36434812)
chr5 (335-445)||(919643-919754)
chr5 (324-413)||(22398066-22398156)
chr5 (316-361)||(3100418-3100463)
chr5 (380-445)||(31803040-31803105)
chr5 (380-445)||(36417129-36417194)
chr5 (384-445)||(38394429-38394490)
chr5 (376-432)||(12676123-12676179)
chr5 (311-442)||(41989568-41989700)
chr5 (316-418)||(892575-892678)
chr5 (315-362)||(3814056-3814103)
chr5 (311-445)||(6338327-6338462)
chr5 (378-445)||(7053649-7053716)
chr5 (311-445)||(7749919-7750054)
chr5 (311-445)||(18353220-18353355)
chr5 (313-411)||(20269453-20269551)
chr5 (311-445)||(21488284-21488419)
chr5 (313-451)||(23411160-23411299)
chr5 (332-445)||(7945838-7945952)
chr5 (363-445)||(11142428-11142510)
chr5 (380-442)||(25027698-25027760)
chr5 (311-361)||(36417133-36417183)
chr5 (311-440)||(37699792-37699922)
chr5 (316-361)||(892564-892609)
chr5 (380-445)||(904048-904113)
chr5 (316-361)||(1098641-1098686)
chr5 (316-361)||(5110618-5110663)
chr5 (311-442)||(11931981-11932114)
chr5 (312-361)||(12094251-12094300)
chr5 (316-361)||(13391544-13391589)
chr5 (316-361)||(13654590-13654635)
chr5 (397-445)||(73785-73833)
chr5 (313-361)||(6499995-6500043)
chr5 (313-361)||(11142449-11142497)
chr5 (317-361)||(12646586-12646630)
chr5 (323-390)||(14723410-14723478)
chr5 (311-442)||(21090388-21090520)
chr5 (397-445)||(30132887-30132935)
chr5 (326-445)||(34297175-34297295)
chr5 (313-444)||(41046830-41046962)
[»] chr3 (46 HSPs)
chr3 (312-442)||(29457844-29457974)
chr3 (313-441)||(33371875-33372003)
chr3 (312-445)||(49885392-49885525)
chr3 (323-437)||(54087407-54087521)
chr3 (311-395)||(5177817-5177901)
chr3 (311-445)||(28406468-28406603)
chr3 (311-445)||(54537455-54537590)
chr3 (311-445)||(53441908-53442043)
chr3 (318-445)||(48593161-48593289)
chr3 (311-445)||(21662898-21663033)
chr3 (315-445)||(12064910-12065041)
chr3 (311-445)||(51516970-51517104)
chr3 (313-445)||(52864965-52865098)
chr3 (329-445)||(8266263-8266378)
chr3 (314-445)||(42225577-42225709)
chr3 (311-441)||(335387-335518)
chr3 (311-445)||(19202262-19202397)
chr3 (311-445)||(45010751-45010886)
chr3 (311-442)||(10049672-10049804)
chr3 (311-445)||(9465083-9465218)
chr3 (311-445)||(29019736-29019871)
chr3 (311-445)||(40214912-40215047)
chr3 (313-442)||(8243696-8243826)
chr3 (313-347)||(40460359-40460393)
chr3 (317-362)||(1086590-1086635)
chr3 (313-445)||(21662887-21663020)
chr3 (311-442)||(6086913-6087045)
chr3 (311-442)||(9440140-9440272)
chr3 (311-445)||(14768099-14768234)
chr3 (311-445)||(25113361-25113496)
chr3 (311-445)||(28945657-28945792)
chr3 (311-413)||(44518048-44518151)
chr3 (311-445)||(49122945-49123080)
chr3 (311-361)||(12747783-12747833)
chr3 (315-361)||(29290794-29290840)
chr3 (332-413)||(32711235-32711317)
chr3 (383-445)||(53703731-53703793)
chr3 (316-361)||(331880-331925)
chr3 (380-445)||(18765340-18765405)
chr3 (384-445)||(28406553-28406614)
chr3 (316-361)||(29241562-29241607)
chr3 (381-422)||(48643687-48643728)
chr3 (316-361)||(52168452-52168497)
chr3 (384-445)||(53441993-53442054)
chr3 (311-442)||(26999025-26999157)
chr3 (318-413)||(32711221-32711317)
[»] chr6 (30 HSPs)
chr6 (311-445)||(2810091-2810225)
chr6 (311-428)||(1836978-1837095)
chr6 (311-441)||(8646684-8646814)
chr6 (371-445)||(2943315-2943389)
chr6 (312-445)||(3064896-3065030)
chr6 (311-445)||(24949643-24949778)
chr6 (311-436)||(28630765-28630891)
chr6 (311-413)||(1158278-1158381)
chr6 (312-445)||(33119905-33120037)
chr6 (327-445)||(27909002-27909122)
chr6 (311-445)||(6045693-6045828)
chr6 (311-445)||(33859491-33859626)
chr6 (313-445)||(7405445-7405578)
chr6 (313-445)||(17265722-17265855)
chr6 (314-445)||(390820-390952)
chr6 (313-361)||(7649813-7649861)
chr6 (311-413)||(2230382-2230485)
chr6 (311-445)||(6047808-6047943)
chr6 (313-438)||(30627837-30627963)
chr6 (378-435)||(7257410-7257467)
chr6 (316-361)||(10258386-10258431)
chr6 (316-361)||(16121047-16121092)
chr6 (316-361)||(26527272-26527317)
chr6 (316-353)||(32124214-32124251)
chr6 (311-347)||(2937092-2937128)
chr6 (329-436)||(6801581-6801689)
chr6 (380-440)||(14931264-14931324)
chr6 (374-418)||(20703476-20703520)
chr6 (311-347)||(28630853-28630889)
chr6 (311-438)||(34639052-34639180)
[»] scaffold0242 (1 HSPs)
scaffold0242 (311-445)||(16519-16654)
[»] scaffold0110 (1 HSPs)
scaffold0110 (313-442)||(1537-1666)
[»] scaffold0024 (2 HSPs)
scaffold0024 (372-445)||(7198-7271)
scaffold0024 (311-445)||(35955-36090)
[»] scaffold0136 (1 HSPs)
scaffold0136 (313-438)||(16543-16669)
[»] scaffold0123 (1 HSPs)
scaffold0123 (311-445)||(29245-29380)
[»] scaffold0767 (1 HSPs)
scaffold0767 (386-445)||(3810-3869)
[»] scaffold0001 (1 HSPs)
scaffold0001 (311-445)||(156769-156904)
[»] scaffold0002 (1 HSPs)
scaffold0002 (311-445)||(492317-492452)
[»] scaffold0023 (1 HSPs)
scaffold0023 (383-445)||(112908-112970)
[»] scaffold0070 (1 HSPs)
scaffold0070 (312-361)||(40158-40207)
[»] scaffold0027 (1 HSPs)
scaffold0027 (316-361)||(5500-5545)


Alignment Details
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 51 - 281
Target Start/End: Original strand, 8826237 - 8826467
Alignment:
Q  51 aatttataaagttaggaattgatgaaaaacacattggaacatgaatgagacagaggaaggaacatagaaagaggtagttgagcacctggtacggaaatga 150  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8826237 aatttataaagttaggaattaatgaaaaaaacattggaacatgaatgagacagaggaaggaacatagaaagaggtagttgagcacctggtacggaaatgt 8826336  T
Q  151 agtggcatagaaagatgttgtgtttatataaggtagaatagagaagagaggaaatttatgatgttggattttcaaagtgaagttgttgacggtcaaacat 250  Q
    ||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8826337 agtggcatagaaagaggttatgtttatataaggtagaatagtgaagagaggaaatttatgatgttggattttcaaagtgaagttgttgacagtcaaacat 8826436  T
Q  251 caaatatttgtaattcaaattttctaaatag 281  Q
    |||||||||||||||||||||||||||||||    
T  8826437 caaatatttgtaattcaaattttctaaatag 8826467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 20745467 - 20745333
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20745467 cctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacatcaactattcaatgaatcaaaaa 20745368  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||||||||||||||||||||||||||    
T  20745367 agtaaattgttttttatatataggaccggagggag 20745333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 47866048 - 47866182
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  47866048 cctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 47866147  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  47866148 agtaaattgtttcttatatataggaccggagggag 47866182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 311 - 440
Target Start/End: Complemental strand, 20459376 - 20459247
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  20459376 cctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 20459277  T
Q  411 agtaaattgttttttatatataggaccgga 440  Q
    |||||||||||| |||||||||||||||||    
T  20459276 agtaaattgtttcttatatataggaccgga 20459247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 311 - 444
Target Start/End: Original strand, 43020768 - 43020901
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  43020768 cctatttataagaaaaagttaactttttagattcattcaataattgatgtacctaacctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 43020867  T
Q  411 agtaaattgttttttatatataggaccggaggga 444  Q
    |||||||||||| |||||||||||||||||||||    
T  43020868 agtaaattgtttcttatatataggaccggaggga 43020901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 3043804 - 3043938
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||||    
T  3043804 cctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagtctaaaaatagaccaaatacatcaactattcaatgaatcaaaaa 3043903  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    | |||||||||| |||||||||| |||||||||||    
T  3043904 aataaattgtttcttatatatagaaccggagggag 3043938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 42804268 - 42804402
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||| ||||||| |||||||||||||    
T  42804268 cctatttataagaaaaagttaactttttagattcattcaataattgatgtacctaatttagaaatagaccaaatacatcaactatttaatgaatcaaaaa 42804367  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    | |||||||||| ||||||||||||||||||||||    
T  42804368 aataaattgtttcttatatataggaccggagggag 42804402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 20956902 - 20957036
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||| ||||  |||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  20956902 cctatttataaaaaaatgttaattttttagattcattcaataattgatgtagctagcctagaaatagaccaaatacatcaactattgaatgaatcaaaaa 20957001  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    | |||||||||| |||||||||| |||||||||||    
T  20957002 aataaattgtttcttatatatagaaccggagggag 20957036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 55190802 - 55190668
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||| || ||| || |||||||||||    
T  55190802 cctatttataagaaaaaattgattttttatattcattcaataattgatgtatctagcctagaaatagaccaaatacatcaattatccactgaatcaaaaa 55190703  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| |||||||||||||| |||||||    
T  55190702 agtaaattgtttcttatatataggaccagagggag 55190668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 40780383 - 40780251
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||  ||||||||||| ||| ||||||||||||||||| ||||  || |||||||| |||||||| ||||||| |||||||||||||    
T  40780383 cctatttataagaaaa--ttaactttttaaattaattcaataattgatgtatctagtttaaaaatagattaaatacatcaactattgaatgaatcaaaaa 40780286  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  40780285 agtaaattgtttcttatatataggaccggagggag 40780251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 311 - 437
Target Start/End: Original strand, 27841844 - 27841969
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||  |||||    
T  27841844 cctatttataa-aaaaagttaattttttagattcattcaataattaatgtacctagcctagaaatagatcaaatacatcaactattcaatgaacaaaaaa 27841942  T
Q  411 agtaaattgttttttatatataggacc 437  Q
    | |||||||||| ||||||||| ||||    
T  27841943 aataaattgtttcttatatataagacc 27841969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 30191908 - 30192043
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||||||||||||||| | |||||||||||||| | |||||||||||  | | |||||| ||||| ||||||||| |  ||| |||||||||||||    
T  30191908 cctatttataagaaaaaattgattttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaa 30192007  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || ||||| ||||| ||| ||||||||||||    
T  30192008 aagttaaatgtttcttataaatacgaccggagggag 30192043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 48361064 - 48361199
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| || |||||||||||||||| | |||||||||||  | | |||||| ||||| ||||||||| |  ||| |||||||||||||    
T  48361064 cctatttataagaaaaatttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaa 48361163  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || ||||| ||||| ||||||| ||||||||    
T  48361164 aagtcaaatgtttcttataaataggacaggagggag 48361199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 48195902 - 48196034
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||||||||||||| |||||||||| ||||||| | ||||||| ||| || | |||||| ||||| ||||||||| |  ||| ||||||| |||||    
T  48195902 cctatttataagaaaaaactaactttttaaattcattgagtaattgacgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaaccaaaa 48196001  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    |||| || ||||| ||||| |||||||||||||    
T  48196002 aagtcaaatgtttcttataaataggaccggagg 48196034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 16412247 - 16412381
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||| ||  | | |||||| ||||| |||||||||||  ||| |||||  ||||| |    
T  16412247 ctatttataagaaaaaattgactttttagattcattgaataattgatatatttggtctagaatatagaccaaatacattatttatgcaatgtgtcaaaga 16412346  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    ||| || | ||| |||||||||| |||||||||||    
T  16412347 agtcaaatatttcttatatatagaaccggagggag 16412381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 313 - 451
Target Start/End: Complemental strand, 44111879 - 44111740
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||||||| || |||||||||||||||| | ||||||||||| ||    ||||| ||||| ||||||||| |  |||  ||| ||||||||||    
T  44111879 tatttataagaaaaagttgactttttagattcattgagtaattgatgtatcttctttagaatatagaccaaatacatcatttatgtaattaatcaaaaaa 44111780  T
Q  412 gtaaattgttttttatatataggaccggagggagaatagt 451  Q
    || || ||||| ||||| |||||||||||||||| |||||    
T  44111779 gtcaaatgtttcttataaataggaccggagggagtatagt 44111740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 421
Target Start/End: Complemental strand, 53225780 - 53225669
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||||||||||||||| |||||||||||||||| ||||||| |||||  | |  |||||  |||| ||||||||| |  ||| |||||||||||||    
T  53225780 cctatttataagaaaaaattgactttttagattcattgaataattaatgtatttggtatagaatgtagaccaaatacatcatttatgcaatgaatcaaaa 53225681  T
Q  410 aagtaaattgtt 421  Q
    ||||||| ||||    
T  53225680 aagtaaaatgtt 53225669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 442
Target Start/End: Complemental strand, 25477679 - 25477549
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||||||  || |||||||| ||||||| | |||||||||||  | |  ||||| ||||||||||||||| |  ||| |||||||||||||||    
T  25477679 tatttataagaaaattttgactttttaaattcattgagtaattgatgtattttgtgtagaatatagatcaaatacatcatttatgcaatgaatcaaaaaa 25477580  T
Q  412 gtaaattgttttttatatataggaccggagg 442  Q
    || || | ||||||||| ||||||| |||||    
T  25477579 gtcaaatattttttataaataggactggagg 25477549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 433
Target Start/End: Complemental strand, 34226461 - 34226400
Alignment:
Q  372 aaatagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatatag 433  Q
    ||||||| ||||||||| || |||||||||||||||||||||||||||||| ||||| ||||    
T  34226461 aaatagaccaaatacatcaattattcaatgaatcaaaaaagtaaattgtttattataaatag 34226400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 445
Target Start/End: Original strand, 53225726 - 53225791
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||| ||||||| |||| ||| ||||| ||||||||||||||||    
T  53225726 caaatacattaattattcaatgaatctaaaaagtcaattttttcttataaataggaccggagggag 53225791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 445
Target Start/End: Original strand, 20114135 - 20114206
Alignment:
Q  374 atagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||| || ||||||||  |||||||| |||| |||||||||||||||||||||| ||||||| ||||||||    
T  20114135 atagaccatatacattagttattcaattaatctaaaaagtaaattgttttttataaataggactggagggag 20114206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 41116574 - 41116624
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||||| ||||||||||||||||||| | |||||||||||    
T  41116574 cctatttataagaaaaatttaactttttagattcattgagtaattgatgta 41116624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 425
Target Start/End: Original strand, 15170897 - 15171010
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||| |||| |||||| |||||||| || |||| ||||||  ||||| |||  | |||| ||| ||||||||||| || ||||||||| ||| |||||    
T  15170897 tatttacaagagaaaattgactttttaaatacattgaataatatatgtaactaatcaagaacataaatcaaatacataaattattcaatgtatctaaaaa 15170996  T
Q  412 gtaaattgtttttt 425  Q
    ||||||||||||||    
T  15170997 gtaaattgtttttt 15171010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 445
Target Start/End: Complemental strand, 36132769 - 36132636
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||||||||||||||| |||||| |||| |||| | || |||||||| || | || ||| |||||  |||||||| |  ||| |||||||||||||||    
T  36132769 tatttataagaaaaaattgacttttaagatacattgagtagttgatgtatcttgtcttgaatatagactaaatacatcatttatacaatgaatcaaaaaa 36132670  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    || || | ||| ||||| ||||||| ||||||||    
T  36132669 gtcaaatatttcttataaataggactggagggag 36132636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 445
Target Start/End: Original strand, 50121451 - 50121584
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctag-aaatagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||||||| || |||||||||||| ||| ||| ||||||||| || | |||| | ||||| |||||| || |  ||| |||||||| ||||||    
T  50121451 tatttataagaaaaatttgactttttagatttattgaatgattgatgtatcttgtctagtatatagaccaaatatatcatttatgcaatgaattaaaaaa 50121550  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    || || ||||| ||||| |||||||  |||||||    
T  50121551 gtcaaatgtttcttataaataggactagagggag 50121584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 31227407 - 31227272
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| || ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  31227407 cctatttacaagagaaagttgactttttagatacattaaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 31227308  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||||| || || ||||||||||| ||||    
T  31227307 aagtaaattgtttcttgtaaataggaccggatggag 31227272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 42169179 - 42169129
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||||| || |||||||||||| ||| |||||||||||||    
T  42169179 cctatttataagaaaaatttgactttttagatttattgaataattgatgta 42169129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 24100776 - 24100821
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||| ||||||||||||||||||||| ||||||| |||||    
T  24100776 ttataagaaataattaactttttagattcattgaataattaatgta 24100821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 24100935 - 24100890
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||| ||||||||||||||||||||| ||||||| |||||    
T  24100935 ttataagaaataattaactttttagattcattgaataattaatgta 24100890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 445
Target Start/End: Original strand, 38687993 - 38688058
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| || |||| |||| ||| |||||||||||||||| || || ||||||||||||||||    
T  38687993 caaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggag 38688058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 435
Target Start/End: Original strand, 42670776 - 42670901
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| |||||||||| ||||||||   ||||| ||||| || |  ||||| ||||| |||||| || |  ||| ||||||||| |||    
T  42670776 cctatttataagaaaaagttaacttttttgattcattgtgtaattaatgtatctcgtttagaatatagaccaaatatatcatttatgcaatgaatctaaa 42670875  T
Q  410 aagtaaattgttttttatatatagga 435  Q
    |||| || ||||| ||||| ||||||    
T  42670876 aagtcaaatgtttcttataaatagga 42670901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 43117989 - 43117940
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||||||| | |||||| ||||||| |||||||||||||    
T  43117989 ctatttataagaaaaaattgattttttacattcattgaataattgatgta 43117940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 18135393 - 18135457
Alignment:
Q  378 atcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  18135393 atcaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 18135457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 448
Target Start/End: Original strand, 31854461 - 31854529
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggagaat 448  Q
    ||||||||| || |||| |||| ||| |||||||||||||||| || || ||||||||||| |||||||    
T  31854461 caaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggaaggagaat 31854529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 443
Target Start/End: Complemental strand, 53658499 - 53658367
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||| |||| |||||||||| |||  |||| | |||||  | | |||||| ||||| |||||||||||   || |||||||| |||||    
T  53658499 ctatttataagaaaaagttaattttttagatttattgtataactaatgtattttgtctagaatatagaccaaatacattattcatacaatgaataaaaaa 53658400  T
Q  411 agtaaattgttttttatatataggaccggaggg 443  Q
    ||| || | ||| ||||| ||| ||||||||||    
T  53658399 agttaaatatttcttataaatatgaccggaggg 53658367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 362
Target Start/End: Original strand, 2643620 - 2643671
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtac 362  Q
    ||||||||||||||| |||| ||||||||| |||||| ||||||| ||||||    
T  2643620 cctatttataagaaataattgactttttagtttcattgaataatttatgtac 2643671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 358
Target Start/End: Complemental strand, 8826826 - 8826779
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgat 358  Q
    ||||||| || ||||||||| |||||||||||||||| ||||||||||    
T  8826826 cctatttgtatgaaaaaatttactttttagattcattgaataattgat 8826779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 361
Target Start/End: Complemental strand, 39993171 - 39993124
Alignment:
Q  314 atttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||| ||||| |||||||||||||||||| ||||||| |||||    
T  39993171 atttataagtaaaaaataactttttagattcattgaataattaatgta 39993124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 8347657 - 8347707
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||||| || |||||||||||||||| | | |||||||||    
T  8347657 cctatttataagaaaaatttgactttttagattcattgagtgattgatgta 8347707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 388
Target Start/End: Original strand, 9894637 - 9894715
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacat 388  Q
    ||||||||||||||||| || ||||||||||||||||   | ||| ||||| || | |||||| |||||||||||||||    
T  9894637 cctatttataagaaaaagttgactttttagattcattatgttattaatgtatcttgtctagaatatagatcaaatacat 9894715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 347
Target Start/End: Original strand, 23226964 - 23226998
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcatt 347  Q
    |||||||||||||||||| ||||||||||||||||    
T  23226964 tatttataagaaaaaattgactttttagattcatt 23226998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 413
Target Start/End: Original strand, 26066382 - 26066484
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||| |||| |||||  ||||||||| ||||||||||||| |  | |||||| ||||| || |||||| |  |||| |||||||| ||||    
T  26066382 ctatttataagaaataattgactttcaagattcattgaataattgatgtatccggtctagaatatagaccagatacatcagttatttaatgaatctaaaa 26066481  T
Q  411 agt 413  Q
    |||    
T  26066482 agt 26066484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 40780262 - 40780312
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||| ||||||||| |||| ||||||| ||||||||||||| ||||||||    
T  40780262 cctatatataagaaacaatttacttttttgattcattcaatagttgatgta 40780312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 444
Target Start/End: Original strand, 45828491 - 45828561
Alignment:
Q  374 atagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 444  Q
    ||||| |||||||||||| || |||||||||| ||||| | |||| ||| ||||| ||||||||| |||||    
T  45828491 atagaccaaatacattaattactcaatgaatctaaaaaatcaattttttcttataaataggaccgaaggga 45828561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 45828551 - 45828501
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||||||||||||| | |||||||||||||| | ||||| |||||    
T  45828551 cctatttataagaaaaaattgattttttagattcattgagtaattaatgta 45828501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 440
Target Start/End: Original strand, 52535965 - 52536093
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa--tagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||| |||||||||||||| |||| ||||||  ||||| ||||  || |||  || ||||||||||| || |||| |||| ||  ||||    
T  52535965 tatttataagaaaaagttaactttttagatacattgaataatgtatgtatctag-ttaaaaacctaaatcaaatacataaattatttaatgtatataaaa 52536063  T
Q  411 agtaaattgttttttatatataggaccgga 440  Q
    ||| |||||| | || || |||||||||||    
T  52536064 agttaattgtatcttgtaaataggaccgga 52536093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 53621410 - 53621472
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  53621410 caaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 53621472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 2401053 - 2401098
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| |||| ||||||||||| ||||||||||||| |||||||    
T  2401053 ttataagcaaaagttaactttttaaattcattcaataaatgatgta 2401098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 11796711 - 11796666
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| ||||||| |||||||||||| ||||||||| |||||||    
T  11796711 ttataagcaaaaattcactttttagatttattcaataaatgatgta 11796666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 361
Target Start/End: Complemental strand, 21587037 - 21587000
Alignment:
Q  324 aaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  21587037 aaaaataaactttttagattcattcaataaatgatgta 21587000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 445
Target Start/End: Complemental strand, 23125712 - 23125647
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| || |||| |||| ||| |||||||||||||| | || || ||||||||||||||||    
T  23125712 caaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggag 23125647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 26636567 - 26636522
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| ||||||| | |||||||||||||||||||| |||||||    
T  26636567 ttataagtaaaaatttattttttagattcattcaataaatgatgta 26636522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 34226400 - 34226449
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||| ||| |||| ||||||| |||||||| |||||||||||||    
T  34226400 ctatttataataaacaatttacttttttgattcattgaataattgatgta 34226449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 441
Target Start/End: Complemental strand, 35329005 - 35328944
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggag 441  Q
    ||||||||| || |||| |||| ||| |||||||||||| |||||| || ||||||||||||    
T  35329005 caaatacataaattatttaatgtatctaaaaagtaaattattttttgtaaataggaccggag 35328944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 445
Target Start/End: Complemental strand, 39877469 - 39877404
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| || |||| |||| ||| ||||||||||| |||| || || ||||||||||||||||    
T  39877469 caaatacataaattatttaatgtatctaaaaagtaaatcgtttcttgtaaataggaccggagggag 39877404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 46518547 - 46518502
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| ||||||||||||||||| || ||||||||| |||||||    
T  46518547 ttataagcaaaaattaactttttaggtttattcaataaatgatgta 46518502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 4386150 - 4386198
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||| || |||||||| ||||||| | |||||||||||    
T  4386150 tatttataagaaaaatttgactttttaaattcattaagtaattgatgta 4386198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 4758857 - 4758921
Alignment:
Q  378 atcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| | || || |||||||||||||    
T  4758857 atcaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 4758921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 32714405 - 32714270
Alignment:
Q  311 cctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaa 408  Q
    ||||||||||| |||||| || |||||| ||||||||||||| |||||||||  | | |||||| |||||  |||||||| |  |||  |||||||||||    
T  32714405 cctatttataaaaaaaaaattgactttt-agattcattcaatgattgatgtattttgtctagaatatagactaaatacatcatttatgtaatgaatcaaa 32714307  T
Q  409 aaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||| || ||||| ||||| |||  |||||| ||||    
T  32714306 aaagtcaaatgtttcttataaataaaaccggaaggag 32714270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 445
Target Start/End: Original strand, 45096609 - 45096721
Alignment:
Q  334 tttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatata 432  Q
    |||||||||| ||| ||||||||||||| || | |||||  ||||| |||||| || |  ||| |||| |||||||||||| || ||||||||||| |||    
T  45096609 tttttagatttattgaataattgatgtatcttgtctagattatagaccaaatatatcatttatgcaataaatcaaaaaagtcaaatgttttttataaata 45096708  T
Q  433 ggaccggagggag 445  Q
     ||  ||||||||    
T  45096709 tgataggagggag 45096721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 445
Target Start/End: Complemental strand, 48361117 - 48361053
Alignment:
Q  381 aaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    |||||||| || || |||||||||| ||||||| || | ||| ||||| ||||||||||||||||    
T  48361117 aaatacatcaattactcaatgaatctaaaaagtcaaatttttcttataaataggaccggagggag 48361053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 54358020 - 54357976
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||| |||||||| |||||| ||||||| |||||    
T  54358020 tataagaaaaaattatctttttaggttcatttaataattaatgta 54357976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 444
Target Start/End: Complemental strand, 54612040 - 54611976
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 444  Q
    ||||||||| || |||| |||| ||| |||||||||||||| | ||||| |||| ||||||||||    
T  54612040 caaatacataaattatttaatgtatctaaaaagtaaattgtgtcttataaatagaaccggaggga 54611976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 5e-63; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 45571042 - 45571176
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  45571042 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 45571141  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  45571142 agtaaattgtttcttatatataggaccggagggag 45571176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 45574709 - 45574843
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  45574709 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 45574808  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  45574809 agtaaattgtttcttatatataggaccggagggag 45574843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 45578376 - 45578510
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  45578376 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 45578475  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  45578476 agtaaattgtttcttatatataggaccggagggag 45578510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 45582043 - 45582177
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  45582043 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 45582142  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  45582143 agtaaattgtttcttatatataggaccggagggag 45582177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 45585710 - 45585844
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  45585710 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 45585809  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  45585810 agtaaattgtttcttatatataggaccggagggag 45585844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 45589377 - 45589511
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  45589377 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 45589476  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  45589477 agtaaattgtttcttatatataggaccggagggag 45589511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 45593044 - 45593178
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  45593044 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 45593143  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  45593144 agtaaattgtttcttatatataggaccggagggag 45593178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 45596711 - 45596845
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  45596711 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 45596810  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  45596811 agtaaattgtttcttatatataggaccggagggag 45596845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 45600378 - 45600512
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  45600378 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 45600477  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  45600478 agtaaattgtttcttatatataggaccggagggag 45600512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 45604045 - 45604179
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  45604045 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 45604144  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  45604145 agtaaattgtttcttatatataggaccggagggag 45604179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 45607712 - 45607846
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  45607712 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 45607811  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  45607812 agtaaattgtttcttatatataggaccggagggag 45607846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 45611379 - 45611513
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  45611379 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 45611478  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  45611479 agtaaattgtttcttatatataggaccggagggag 45611513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 45615046 - 45615180
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  45615046 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 45615145  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  45615146 agtaaattgtttcttatatataggaccggagggag 45615180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 45034410 - 45034544
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  45034410 cctatttataagaaaaagttaactttttagattcattcaataattgatgtacctaacctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 45034509  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  45034510 agtaaattgtttcttatatataggaccggagggag 45034544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 4044710 - 4044576
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  4044710 cctatttataagaaaaagtaaaatttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 4044611  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| |||||||||||| || ||||||    
T  4044610 agtaaattgtttcttatatataggatcgaagggag 4044576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 4063285 - 4063418
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||  |||||||||||  |||||||| ||||||||||||||||||||||    
T  4063285 ctatttataagaaaaagttaattttttagattcattcaataattgatgtacctactctagaaatagacaaaatacatcaactattcaatgaatcaaaaaa 4063384  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| ||||||||||||||||||||||    
T  4063385 gtaaattgtttcttatatataggaccggagggag 4063418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 314 - 440
Target Start/End: Original strand, 15384442 - 15384568
Alignment:
Q  314 atttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaagt 413  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||    
T  15384442 atttataagaaaaaattaactttttagatttatttaataattgatgtacctagcttggaaatagaccaaatacatcaactattcaatgaatcaaaaaagt 15384541  T
Q  414 aaattgttttttatatataggaccgga 440  Q
    ||||||||| |||||||||||||||||    
T  15384542 aaattgtttcttatatataggaccgga 15384568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 312 - 442
Target Start/End: Complemental strand, 3838552 - 3838422
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||| | | ||||||||||| ||||||||| ||||||||||||||||||||||    
T  3838552 ctatttataagaaaaagttaactttttagattcattcaatgattgatgtacttcgtctagaaatagaccaaatacatcaactattcaatgaatcaaaaaa 3838453  T
Q  412 gtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| ||||||||||||| |||||    
T  3838452 gtaaattgtttcttatatataggactggagg 3838422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 312 - 442
Target Start/End: Complemental strand, 11030327 - 11030196
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||| ||    ||||| ||||| ||||||||| |  |||  |||||||||||||    
T  11030327 ctatttataagaaaaaattaactttttagattcattgagtaattgatgtatctgatatagaatatagaccaaatacatcatttatgtaatgaatcaaaaa 11030228  T
Q  411 agtaaattgttttttatatataggaccggagg 442  Q
    ||| || ||||| |||||||||||| ||||||    
T  11030227 agtcaaatgtttcttatatataggatcggagg 11030196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 20555270 - 20555404
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||||||||||||||||| ||||||||| |||| ||||||||||||| || | |||||| ||||| |||||||||||  |||  ||||||| ||||    
T  20555270 cctatttataagaaaaaattaattttttagatacattgaataattgatgtatcttgtctagaatatagaccaaatacattatttatgtaatgaat-aaaa 20555368  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || |||||  |||| ||||||||||||||||    
T  20555369 aagttaaatgtttcctataaataggaccggagggag 20555404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 313 - 445
Target Start/End: Complemental strand, 9152513 - 9152380
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||| |||||| |||| |||||||||||||||| | ||||||||||| |||| ||| || ||||| ||||||||| || |||| ||||| ||||||||    
T  9152513 tatttacaagaaacaattgactttttagattcattgagtaattgatgtatctagtctaaaatatagaccaaatacatcaattatttaatgactcaaaaaa 9152414  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    || || ||||| || || ||||||||||||||||    
T  9152413 gtcaaatgtttcttgtaaataggaccggagggag 9152380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 12486005 - 12486139
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||| |||||| |||| ||||||||| |||||| ||||||| ||| ||   |||||||| ||||| ||||||||| || ||||||||||||| ||||    
T  12486005 ctatttacaagaaagaattgactttttaggttcattgaataatttatggactcggcctagaatatagaccaaatacatcaattattcaatgaatctaaaa 12486104  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    ||| |||||||| || || |||||||| |||||||    
T  12486105 agtcaattgtttcttgtaaataggaccagagggag 12486139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 310 - 445
Target Start/End: Original strand, 11794460 - 11794596
Alignment:
Q  310 acctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaa 408  Q
    ||||||||||||||||||||| | |||||||||| ||| ||||||| |||||| | |  |||||  |||||||||||||| |  ||| | ||||| ||||    
T  11794460 acctatttataagaaaaaattgattttttagatttattgaataattaatgtacttggtatagaatgtagatcaaatacatcatttatgccatgaaacaaa 11794559  T
Q  409 aaagtaaattgttttttatatataggaccggagggag 445  Q
    || ||||| ||||| ||||| ||||||||||||||||    
T  11794560 aatgtaaaatgtttcttataaataggaccggagggag 11794596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 38983135 - 38983000
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||| ||||| || | ||||||||||||||   ||||||||||| || | |||||| |||||  |||||||| |  ||| |||||||||||||    
T  38983135 cctatttataaaaaaaagttgattttttagattcattgtgtaattgatgtatcttgtctagaatatagacaaaatacatcatttatgcaatgaatcaaaa 38983036  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || | ||||||||| ||||||||||||||||    
T  38983035 aagtcaaatattttttataaataggaccggagggag 38983000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 441
Target Start/End: Original strand, 40430678 - 40430809
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||| |||||| ||||||||||| |||||||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  40430678 cctatttataagagaaaattgactttttagatacattcaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 40430777  T
Q  410 aagtaaattgttttttatatataggaccggag 441  Q
    ||||||||||| | ||||| ||||||||||||    
T  40430778 aagtaaattgtctcttataaataggaccggag 40430809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 445
Target Start/End: Original strand, 12962719 - 12962852
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||||||| || |||||||||||||||| | ||||| |||||| | |  || || ||||| ||||||||| |  ||| |||||||||||||||    
T  12962719 tatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtataaaatatagaccaaatacatcatttatgcaatgaatcaaaaaa 12962818  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    || || ||||| ||||| |||||||| |||||||    
T  12962819 gtcaaatgtttcttataaataggaccagagggag 12962852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 437
Target Start/End: Complemental strand, 32457346 - 32457222
Alignment:
Q  314 atttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaag 412  Q
    |||||||||||||| || |||||||||||||||| | ||||||||||| || | |||||| |||||  |||||||| |  ||| ||||||||||||||||    
T  32457346 atttataagaaaaatttgactttttagattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaatcaaaaaag 32457247  T
Q  413 taaattgttttttatatataggacc 437  Q
    | || | ||| ||||| ||||||||    
T  32457246 tcaaatatttcttataaataggacc 32457222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 437
Target Start/End: Complemental strand, 38554594 - 38554467
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| ||||||||||| ||||||| | ||||| |||||| | |  ||||| ||||| |||||||||||  |||  ||||||||||||    
T  38554594 cctatttataagaaaaagttaactttttaaattcattgagtaattaatgtacttggtatagaatatagaccaaatacattatttatgtaatgaatcaaaa 38554495  T
Q  410 aagtaaattgttttttatatataggacc 437  Q
     ||| || ||||| ||||| ||||||||    
T  38554494 tagtcaaatgtttcttataaataggacc 38554467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 43714109 - 43713975
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||   || |||||||||||| | | | ||||||||||| || | ||| | ||||| ||||||||| |  ||||||||||||||||||    
T  43714109 cctatttataagaaatttttgactttttagatttactgagtaattgatgtatcttgtctaaatatagaccaaatacataatttattcaatgaatcaaaaa 43714010  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    | | |||||||| ||||| ||| || |||||||||    
T  43714009 aatcaattgtttcttataaataagagcggagggag 43713975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 445
Target Start/End: Complemental strand, 20427135 - 20427002
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||| |||||| ||||||||||| |||| ||||||  ||||| |||| | ||||  || ||||||||||| || |||| |||  ||| |||||    
T  20427135 tatttataagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaattatttaatctatctaaaaa 20427036  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| | || || ||||||||||||||||    
T  20427035 gtaaattgtctcttgtaaataggaccggagggag 20427002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 43135044 - 43135158
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||| |||||||||||||| ||||||||| |||  |||       ||||||||||||||| || |||| ||| |||||||||    
T  43135044 cctatttataagaaaaa-ttaattttttagattcattaaataattgacgtatatag-------atagatcaaatacatcaattatttaataaatcaaaaa 43135135  T
Q  411 agtaaattgttttttatatatag 433  Q
    ||| |||||||| ||||| ||||    
T  43135136 agtgaattgtttcttataaatag 43135158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 428
Target Start/End: Complemental strand, 41153247 - 41153129
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| || |||||||||||||||| | |||||||||||  | |  || || ||||| ||||||||| |  ||| |||||||||||||    
T  41153247 cctatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtttataatatagaccaaatacatcatttatgcaatgaatcaaaa 41153148  T
Q  410 aagtaaattgttttttata 428  Q
    |||| || ||||| |||||    
T  41153147 aagtcaaatgtttcttata 41153129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 442
Target Start/End: Complemental strand, 7943576 - 7943443
Alignment:
Q  311 cctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaa 408  Q
    |||||||||||||||||| || |||||||||||||||| ||||||||||||| || | ||| || ||||| |||||| || |  ||| |||||||| |||    
T  7943576 cctatttataagaaaaaaattgactttttagattcattgaataattgatgtatcttgtctacaatatagaccaaatatatcatttatgcaatgaataaaa 7943477  T
Q  409 aaagtaaattgttttttatatataggaccggagg 442  Q
    ||||| || | | | ||||| ||| |||||||||    
T  7943476 aaagtcaaatatctcttataaataagaccggagg 7943443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 442
Target Start/End: Complemental strand, 6761601 - 6761469
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| | | || ||||||||||| |||| ||||||  ||||| |||| | |||| ||| | ||||||||| || ||||||||| ||| |||    
T  6761601 cctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaattattcaatgtatctaaa 6761502  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| | || || |||||||||||||    
T  6761501 aagtaaattgtctcttgtaaataggaccggagg 6761469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 432
Target Start/End: Original strand, 7833300 - 7833416
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaagtaa 415  Q
    ||||||||| ||| || |||||||||||||| ||||||||||||| ||    || || |||||||| |||||||||||||| ||| |||| ||||| | |    
T  7833300 tataagaaacaatcaattttttagattcattgaataattgatgtatctgatttaaaatatagatcagatacattaactatttaataaatctaaaaaatta 7833399  T
Q  416 attgttttttatatata 432  Q
    | ||||| |||||||||    
T  7833400 agtgtttcttatatata 7833416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 30761390 - 30761525
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||| | || |||||||| ||||||| | ||||| || || || | |||||| |||||  ||||||||    | | |||||||||||||    
T  30761390 cctatttataagaaacatttgactttttacattcattgagtaattaatttatcttgtctagaatatagactaaatacatattttgtgcaatgaatcaaaa 30761489  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || ||||| ||||| ||||||||||||||||    
T  30761490 aagtcaaatgtttcttataaataggaccggagggag 30761525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 5109375 - 5109425
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||| |||||    
T  5109375 cctatttataagaaaaagttaactttttagattcattgagtaattaatgta 5109425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 12486128 - 12486078
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||| |||||| |||| |||||||||||||||| |||||||||||||    
T  12486128 cctatttacaagaaacaattgactttttagattcattgaataattgatgta 12486078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 413
Target Start/End: Complemental strand, 28249068 - 28248966
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||| || |||||||||||||||| ||||||| |||||  | |  ||||| |||||  ||||||||||  ||| |||| |||||||||    
T  28249068 ctatttataagaaaaagttgactttttagattcattaaataattaatgtatttggtatagaatatagactaaatacattatttatgcaattaatcaaaaa 28248969  T
Q  411 agt 413  Q
    |||    
T  28248968 agt 28248966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 5559377 - 5559426
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtac 362  Q
    ||||||||||||||| || |||||||||||||||| | ||||||||||||    
T  5559377 tatttataagaaaaatttgactttttagattcattgagtaattgatgtac 5559426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 435
Target Start/End: Complemental strand, 22333661 - 22333536
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||| |||| |||||||||| |||||||||||||||| | ||||| || ||| |    || || |||||||||||||||||  ||| |||||||||||||    
T  22333661 cctagttattagaaaaaattgactttttagattcattgagtaattaatatacttgatatataatatagatcaaatacattatttatgcaatgaatcaaaa 22333562  T
Q  410 aagtaaattgttttttatatatagga 435  Q
    ||||  | ||||| ||||| ||||||    
T  22333561 aagtttaatgtttcttataaatagga 22333536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 445
Target Start/End: Original strand, 29988906 - 29989039
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||| |||||||| | |||||| |||||||   ||||| || ||  | | |||||| ||||||||||||||| |  ||| |||||||||||||||    
T  29988906 tatttataaaaaaaaattgattttttatattcattgtgtaattaatatattttgtctagaatatagatcaaatacatcatttatgcaatgaatcaaaaaa 29989005  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    || || ||||| || || ||||||| ||||||||    
T  29989006 gtcaaatgtttcttctaaataggactggagggag 29989039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 445
Target Start/End: Complemental strand, 41260091 - 41260026
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| || |||| |||| |||||||||||||||||| | || || ||||||||||||||||    
T  41260091 caaatacataaattatttaatgtatcaaaaaagtaaattgtctcttgtaaataggaccggagggag 41260026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 442
Target Start/End: Original strand, 44737297 - 44737426
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaag 412  Q
    |||||| |||| |||||| ||||||||||| |||| ||||||  ||||| ||||   ||||    | ||||||||| || ||||||||| ||| ||||||    
T  44737297 tatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagttaagaatctaaccaaatacataaattattcaatgtatctaaaaag 44737396  T
Q  413 taaattgttttttatatataggaccggagg 442  Q
    |||||||| | || || |||||||||||||    
T  44737397 taaattgtctcttgtaaataggaccggagg 44737426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 7765806 - 7765938
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| || ||||||||||| |||| ||||||  ||||| |||| | ||||  || ||||||||||| |  |||| |||| ||| |||    
T  7765806 cctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataatttatttaatgtatctaaa 7765905  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| | ||||| |||||||| ||||    
T  7765906 aagtaaattgtctcttataaataggaccagagg 7765938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 16241279 - 16241411
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| | | || ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || ||||||||| ||| |||    
T  16241279 cctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaa 16241378  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| | || || |||||||||||||    
T  16241379 aagtaaattgtctcttgtaaataggaccggagg 16241411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 445
Target Start/End: Original strand, 25795321 - 25795385
Alignment:
Q  381 aaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| ||||||||||||| ||||||| |||||||| || ||   ||||||||||||||    
T  25795321 aaatacattaattattcaatgaatctaaaaagtcaattgtttcttgtaataaggaccggagggag 25795385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 25891956 - 25892088
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||| | | || |||||||||||  ||| ||||||  ||||| |||| | ||||  || | ||||||||| || ||||||||| ||| |||    
T  25891956 cctatttataagagacagttgactttttagataaattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaa 25892055  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| | || || |||||||||||||    
T  25892056 aagtaaattgtctcttgtaaataggaccggagg 25892088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 44274667 - 44274623
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||| ||||||| |||||||||||||||||||||| |||||||    
T  44274667 tataagcaaaaattcactttttagattcattcaataaatgatgta 44274623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 7943524 - 7943587
Alignment:
Q  383 atacattaactattcaatgaatcaaaaaagtaaattgtttt-ttatatataggaccggagggag 445  Q
    |||||| || ||||||||||||| ||||||| |||| |||| ||||| ||||||||||||||||    
T  7943524 atacatcaattattcaatgaatctaaaaagtcaatttttttcttataaataggaccggagggag 7943587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 29866218 - 29866083
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| || ||||||||| | |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  29866218 cctatttacaagataaagttgactttttaggtacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 29866119  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| | || || ||||||||||||||||    
T  29866118 aagtaaattgtctcttgtaaataggaccggagggag 29866083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 42263482 - 42263617
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||| ||| || | ||||||||| |||| ||||||  |||||  ||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  42263482 cctatttataagagaaagttgattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 42263581  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||||| || || ||||||| ||||||||    
T  42263582 aagtaaattgtttcttgtaaataggactggagggag 42263617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 45065592 - 45065727
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||| | ||| || ||||||||||| |||| ||||||  ||||| |||| ||||||  || || |||||||| || |||| |||| ||| |||    
T  45065592 cctatttataaaagaaagttgactttttagatacattgaataatgtatgtatctagtctagaatctaaattaaatacataaattatttaatgtatctaaa 45065691  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| | || || |||| || ||||||||    
T  45065692 aagtaaattgtctcttgtaaatagaactggagggag 45065727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 358
Target Start/End: Complemental strand, 43714175 - 43714133
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgat 358  Q
    |||||||| |||||| |||||||||||||||||||||| ||||    
T  43714175 ttataagagaaaattcactttttagattcattcaataaatgat 43714133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 438
Target Start/End: Original strand, 3037741 - 3037865
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaata--attgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaagt 413  Q
    ||||||||| || | ||||||||||| |||| ||||  ||||||||| |  | |||||| ||| | ||||||||| || ||||||||||||| ||||| |    
T  3037741 tataagaaacaaatgactttttagatacattgaatataattgatgtatccggtctagaatatacaccaaatacataaattattcaatgaatctaaaaaat 3037840  T
Q  414 aaattgttttttatatataggaccg 438  Q
     | |||||| || ||||||||||||    
T  3037841 catttgtttcttgtatataggaccg 3037865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 4755479 - 4755524
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||| |||||| |||||||||||||| ||||||| |||||    
T  4755479 ttataagaaacaattaattttttagattcattaaataattaatgta 4755524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 441
Target Start/End: Complemental strand, 5109429 - 5109368
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggag 441  Q
    |||||||||||| || |||||||||| ||||||| || | ||| ||||| ||||||||||||    
T  5109429 caaatacattaattactcaatgaatctaaaaagttaactttttcttataaataggaccggag 5109368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 445
Target Start/End: Original strand, 11711350 - 11711471
Alignment:
Q  325 aaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaaaagtaaattgtttt 423  Q
    |||||| ||||||||||| |||| ||||||  ||||| |||| | ||||  ||  |||||||||| || |||| |||| |||  ||||||||||||| |     
T  11711350 aaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaagtcaaatacataaattatttaatgtatcttaaaagtaaattgtctc 11711449  T
Q  424 ttatatataggaccggagggag 445  Q
    || || ||||||||||||||||    
T  11711450 ttgtaaataggaccggagggag 11711471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 11726622 - 11726577
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| |||||||||| ||||||||||||||| ||| |||||||    
T  11726622 ttataagcaaaaattaacattttagattcattcattaaatgatgta 11726577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 15119790 - 15119835
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| |||||||||| ||||||||||||||| ||| |||||||    
T  15119790 ttataagcaaaaattaacattttagattcattcattaaatgatgta 15119835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 428
Target Start/End: Original strand, 26194307 - 26194348
Alignment:
Q  387 attaactattcaatgaatcaaaaaagtaaattgttttttata 428  Q
    |||||||||| |||||||| |||||||||| |||||||||||    
T  26194307 attaactatttaatgaatctaaaaagtaaaatgttttttata 26194348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 355
Target Start/End: Complemental strand, 27251478 - 27251437
Alignment:
Q  314 atttataagaaaaaattaactttttagattcattcaataatt 355  Q
    |||||| ||| ||||||||||||||| |||||||||||||||    
T  27251478 atttatgagagaaaattaactttttatattcattcaataatt 27251437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 445
Target Start/End: Original strand, 27596731 - 27596796
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| || ||||||||| ||| ||||||| ||| || ||| ||| ||||||||||||||||    
T  27596731 caaatacataaattattcaatgtatctaaaaagtcaatcgtctttcataaataggaccggagggag 27596796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 412
Target Start/End: Complemental strand, 35728600 - 35728499
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||| ||||| ||  ||||||| ||||||| ||||||||||||| || |  ||||| ||||| |||||| || |  ||| ||||||||||||||    
T  35728600 ctatttataaaaaaaatttggctttttaaattcattgaataattgatgtatcttgtttagaatatagaccaaatatatcatttatgcaatgaatcaaaaa 35728501  T
Q  411 ag 412  Q
    ||    
T  35728500 ag 35728499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 43135158 - 43135109
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||||||| |||| ||||||| |||| ||| |||||||||||||    
T  43135158 ctatttataagaaacaattcacttttttgatttattaaataattgatgta 43135109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 45472423 - 45472468
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| ||||||| |||||||| ||||||||||||| |||||||    
T  45472423 ttataagtaaaaatttactttttaaattcattcaataaatgatgta 45472468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 366
Target Start/End: Original strand, 13021716 - 13021768
Alignment:
Q  314 atttataagaaaaaattaactttttagattcattcaataattgatgtacctag 366  Q
    |||||||||| ||| ||||||||||||||||||| ||||| | ||||| ||||    
T  13021716 atttataagagaaagttaactttttagattcatttaataaattatgtatctag 13021768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 32346092 - 32346136
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||| |||||||| |||||||||||||||||||| | |||||||    
T  32346092 tataaaaaaaaattgactttttagattcattcaattaatgatgta 32346136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 41824386 - 41824342
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||| ||||||| ||||||||| |||||||||||| |||||||    
T  41824386 tataagtaaaaattgactttttaggttcattcaataaatgatgta 41824342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 42698198 - 42698150
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||| ||||| || |||||||||||||||| | |||||||||||    
T  42698198 tatttataaaaaaaatttgactttttagattcattgagtaattgatgta 42698150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 3e-58; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 6899432 - 6899566
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  6899432 cctatttataagaaaaatttaacttttgagattcattcaataattgatgtacctaacctagaaatagatcaaatacatcaactattcaatgaatcaaaaa 6899531  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  6899532 agtaaattgtttcttatatataggaccggagggag 6899566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 12958788 - 12958922
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  12958788 cctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcttagaaatagaccaaatacatcaactattcaatgaatcaaaaa 12958887  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  12958888 agtaaattgtttcttatatataggaccggagggag 12958922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 44796354 - 44796488
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  44796354 cctatttataagaaaaagttaactttttagattcattcaataattgatgtacatagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 44796453  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  44796454 agtaaattgtttcttatatataggaccggagggag 44796488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 36366160 - 36366026
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  36366160 cctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattgaatgaatcaaaaa 36366061  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  36366060 agtaaattgtttcttatatataggaccggagggag 36366026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 311 - 454
Target Start/End: Original strand, 22429547 - 22429690
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  22429547 cctatttataagaaaaagttaattttttagatttattcaataattaatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 22429646  T
Q  411 agtaaattgttttttatatataggaccggagggagaatagtata 454  Q
    |||||||||||| |||||||||||||||||||||| ||| ||||    
T  22429647 agtaaattgtttcttatatataggaccggagggagtataatata 22429690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 35011224 - 35011360
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  35011224 cctatttataagaaaaagttaattttttagattcattcaataattaatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 35011323  T
Q  411 agtaaattgtt--ttttatatataggaccggagggag 445  Q
    |||||||||||  || |||||||||||||||||||||    
T  35011324 agtaaattgtttcttatatatataggaccggagggag 35011360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 24177984 - 24178118
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  24177984 cctatttataagaaaaagttaactttttagattcattcaatatttgatgtacctagcttagaaatagaccaaatacatcaactattcaatgaatcaaaaa 24178083  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    | |||| ||||| |||||||||| |||||||||||    
T  24178084 aataaactgtttcttatatatagaaccggagggag 24178118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 313 - 442
Target Start/End: Original strand, 42786378 - 42786506
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaag 412  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||| |||| ||||||    
T  42786378 tatttataagaaaaagttaactttttagattcattcaataattgatgtacttagcttagaaatagaccaaatacattaactattcaataaatc-aaaaag 42786476  T
Q  413 taaattgttttttatatataggaccggagg 442  Q
    |||||||||| |||||||||||||||||||    
T  42786477 taaattgtttcttatatataggaccggagg 42786506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 32575183 - 32575318
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattg----atgtacctagcctagaaatagatcaaatacattaactattcaatgaatca 406  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||    |||||||||||||| ||||||| ||||||||| || |||||||||||| |    
T  32575183 cctatttacaagaaaaagttaactttttagattcattcaataattgattgatgtacctagcctaaaaatagaccaaatacatcaattattcaatgaataa 32575282  T
Q  407 aaaaagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||||||||||||||||||||||||||||    
T  32575283 aaaaagtaaattgttttttatatataggaccggagg 32575318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 311 - 421
Target Start/End: Complemental strand, 24915305 - 24915195
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||  |||||||| || |||| |||||||||||||    
T  24915305 cctatttatatgaaaaaattaactttttagattcattaaataattgatgtatctagcttagaaatagacaaaatacatcaattatttaatgaatcaaaaa 24915206  T
Q  411 agtaaattgtt 421  Q
    | |||||||||    
T  24915205 aataaattgtt 24915195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 10839775 - 10839909
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||||||||||||||| |||||||||||||||| ||||||| |||||| | |  ||||| ||||| ||||||||| |  ||| ||||||||| |||    
T  10839775 cctatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatatagaccaaatacatcatttatgcaatgaatc-aaa 10839873  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || ||||| ||||| ||||||||||| ||||    
T  10839874 aagttaaatgtttcttataaataggaccggatggag 10839909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 435
Target Start/End: Original strand, 5031476 - 5031601
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| ||||||||||| ||||||| | ||||||||||| || | |||||| |||||  |||||||| |  ||| |||||||||||||    
T  5031476 cctatttataagaaaaatttaactttttaaattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaatcaaaa 5031575  T
Q  410 aagtaaattgttttttatatatagga 435  Q
    |||| || ||||| ||||| ||||||    
T  5031576 aagtcaaatgtttcttataaatagga 5031601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 442
Target Start/End: Complemental strand, 13831497 - 13831367
Alignment:
Q  311 cctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||||||||||||| || |||||||||||||||| |||||||||||||  ||| ||| ||||||| | ||||||| || |||| |||||||  |||    
T  13831497 cctatttataagaaaaaaattgactttttagattcattaaataattgatgtatttagtctaaaaatagaccgaatacatcaattatttaatgaat--aaa 13831400  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    ||  ||||||||| ||||| |||||| ||||||    
T  13831399 aataaaattgtttcttataaataggatcggagg 13831367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 314 - 442
Target Start/End: Complemental strand, 16448922 - 16448793
Alignment:
Q  314 atttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaag 412  Q
    |||||||||||||| ||||||||||||||||||| | ||||||||||| ||    ||||| ||| | |||||| || |  ||| ||||||||||||||||    
T  16448922 atttataagaaaaatttaactttttagattcattgagtaattgatgtatcttatatagaatataaaccaaatatatcatttatgcaatgaatcaaaaaag 16448823  T
Q  413 taaattgttttttatatataggaccggagg 442  Q
    | || ||||| ||||| |||||||||||||    
T  16448822 tcaaatgtttcttataaataggaccggagg 16448793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 7693169 - 7693034
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||||||||||||||| |||||||||||||||| | ||||| |||||  | |  || || |||||  |||||||| |  ||| |||||||||||||    
T  7693169 cctatttataagaaaaaattgactttttagattcattgagtaattaatgtatttggtataaaatatagactaaatacatcatttatgcaatgaatcaaaa 7693070  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||| ||||| ||||| ||||||  ||||||||    
T  7693069 aagtaaaatgtttcttataaataggattggagggag 7693034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 445
Target Start/End: Complemental strand, 10396864 - 10396793
Alignment:
Q  374 atagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||| || ||||||||  |||||||| |||| |||||||||||||||||||||| ||||||| ||||||||    
T  10396864 atagaccatatacattagttattcaattaatctaaaaagtaaattgttttttataaataggactggagggag 10396793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 445
Target Start/End: Complemental strand, 42123090 - 42122967
Alignment:
Q  323 aaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaagtaaattgtt 421  Q
    |||||||| |||||||||||||||| | ||||| ||||| || | |||||| ||| | ||||||||| |  ||| ||||||||||||||||| ||  |||    
T  42123090 aaaaaattgactttttagattcattgagtaattaatgtatcttgtctagaatatataccaaatacatcatttatgcaatgaatcaaaaaagtcaaacgtt 42122991  T
Q  422 ttttatatataggaccggagggag 445  Q
    | ||||| ||||||| ||||||||    
T  42122990 tcttataaataggactggagggag 42122967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 411
Target Start/End: Complemental strand, 6354783 - 6354682
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||| |||||| |||||||||||||| ||||||| |||||      |||||| ||| |||| ||||||||| |||||||| ||||||||    
T  6354783 cctatttataagaaataattaattttttagattcattgaataatttatgtattcgatctagaatatatatcatatacattaattattcaataaatcaaaa 6354684  T
Q  410 aa 411  Q
    ||    
T  6354683 aa 6354682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 439
Target Start/End: Complemental strand, 35149804 - 35149675
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| || | |||||||||| |||   ||||| ||||| || | |||||| ||||| ||||||||| |  ||| |||| ||||||||    
T  35149804 cctatttataagaaaaagttgattttttagatttattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaattaatcaaaa 35149705  T
Q  410 aagtaaattgttttttatatataggaccgg 439  Q
    |||| || ||||| ||||| ||||||||||    
T  35149704 aagtcaaatgtttcttataaataggaccgg 35149675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 445
Target Start/End: Original strand, 3236353 - 3236477
Alignment:
Q  322 gaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaagtaaattgt 420  Q
    ||||||||| |||||||| ||||||| ||||||||||||| ||||  || ||  |||| ||||||||| |  ||| |||||||| |||||||| || | |    
T  3236353 gaaaaaattgactttttaaattcattgaataattgatgtatctagtttaaaatttagaccaaatacatcatttatacaatgaattaaaaaagtcaaatat 3236452  T
Q  421 tttttatatataggaccggagggag 445  Q
    || ||||| ||| ||||||||||||    
T  3236453 ttcttataaatatgaccggagggag 3236477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 10184685 - 10184637
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||||||||||  |||||||||||||||| |||||||||||||    
T  10184685 tatttataagaaaaaatcgactttttagattcattgaataattgatgta 10184637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 2339426 - 2339291
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| || ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  2339426 cctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 2339327  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| | || || ||||||||||||||||    
T  2339326 aagtaaattgtctcttgtaaataggaccggagggag 2339291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 7693045 - 7693180
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaat-agatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||| | || ||||||| ||||||||  |||| |||||||  ||| ||| |  | | | |||||||||||| || |||||||||| |||    
T  7693045 cctatttataagaaacattttacttttttgattcattgcataaatgatgtatttagtctatattttataccaaatacattaattactcaatgaatctaaa 7693144  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| |||| ||| ||||| ||||||||||| ||||    
T  7693145 aagtcaattttttcttataaataggaccggaaggag 7693180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 29563794 - 29563659
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| || ||||||||||| |||||||||||  ||||| ||||   ||||  || | ||||||||| || |||| |||| ||| |||    
T  29563794 cctatttacaagagaaagttgactttttagatacattcaataatgtatgtatctagttaagaacctaaaccaaatacataaattatttaatgtatctaaa 29563695  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| | || || ||||||||||||||||    
T  29563694 aagtaaattgtctcttgtaaataggaccggagggag 29563659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 41915730 - 41915595
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| |||||| ||||||||||| |||| ||||||  ||||| |||| | | ||  || | ||||||||| || |||| |||| ||| |||    
T  41915730 cctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaataatctaaaccaaatacataaattatttaatgtatctaaa 41915631  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    || |||||||| | ||||| ||||||||||||||||    
T  41915630 aattaaattgtctcttataaataggaccggagggag 41915595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 442
Target Start/End: Original strand, 8803242 - 8803372
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||| |||||||| ||||||||||| ||| |||   ||||| ||||| || | |||||| ||||| ||||||||| |  |||  ||||||||||||||    
T  8803242 tatttacaagaaaaagttaactttttatatttattatgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgtaatgaatcaaaaaa 8803341  T
Q  412 gtaaattgttttttatatataggaccggagg 442  Q
    || || | ||||||||| |||||| ||||||    
T  8803342 gttaaatattttttataaataggatcggagg 8803372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 15726895 - 15726849
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattga 357  Q
    |||||||||||||||||||| |||||||||||||||| | |||||||    
T  15726895 cctatttataagaaaaaattgactttttagattcattgagtaattga 15726849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 30924003 - 30924065
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||| || |||| |||| ||| |||||||||||||| ||||||| |||||||||||||    
T  30924003 caaatacataaattatttaatgtatctaaaaagtaaattgtcttttataaataggaccggagg 30924065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 43932134 - 43932196
Alignment:
Q  383 atacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| ||||||||||||| ||||||| |||||||| |||||   ||||||||||||||    
T  43932134 atacattaattattcaatgaatctaaaaagtcaattgtttcttataataaggaccggagggag 43932196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 15720211 - 15720344
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||||||||||||||||| | ||  | |||||||||||  |    || || |||||||||||||||||  |||  ||||||||||||    
T  15720211 cctatttataagaaaaaattaactttttagacttatagagtaattgatgtatttgttataaaatatagatcaaatacattatttatggaatgaatcaaaa 15720310  T
Q  410 aagtaaattgtt-ttttatatataggaccggagg 442  Q
    |||| || |||| || ||||||||| ||| ||||    
T  15720311 aagttaaatgttcttatatatatagtaccagagg 15720344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 443
Target Start/End: Complemental strand, 22782018 - 22781885
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||| ||| || | ||||| ||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  22782018 cctatttataagagaaagttgattttttggatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 22781919  T
Q  410 aagtaaattgttttttatatataggaccggaggg 443  Q
    ||||||||||||| || || ||||||||||||||    
T  22781918 aagtaaattgtttcttgtaaataggaccggaggg 22781885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 24419007 - 24418962
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| ||||||| |||||||||||||||||||||| |||||||    
T  24419007 ttataagcaaaaattcactttttagattcattcaataaatgatgta 24418962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 195723 - 195679
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||    
T  195723 tataagaaaaaattatctttttagattcattaaataattaatgta 195679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 310560 - 310516
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||    
T  310560 tataagaaaaaattatctttttagattcattaaataattaatgta 310516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 34711095 - 34711143
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||| |||||||| |||||||||||||||| | |||||||||||    
T  34711095 tatttataaaaaaaaattgactttttagattcattgagtaattgatgta 34711143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 8453730 - 8453596
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| || | ||||||||| |||| | |||||||| || || | |||||| |||||| ||||||||||  |||  ||||||||||||    
T  8453730 cctatttataagaaaaatttgattttttagatacattgagtaattgatatatcttgtctagaatatagat-aaatacattatttatgtaatgaatcaaaa 8453632  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    || | || |||||  |||| |||| |||||| ||||    
T  8453631 aattcaaatgtttcctataaatagaaccggatggag 8453596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 34028519 - 34028384
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| || || |||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  34028519 cctatttacaagagaaagttgaccttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 34028420  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||||  || || ||||||||||||||||    
T  34028419 aagtaaattgttacttgtaaataggaccggagggag 34028384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 376
Target Start/End: Original strand, 39149644 - 39149704
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaata 376  Q
    |||||||||| |||||||||| |||||||||||||||| ||    ||||||||| ||||||||||    
T  39149644 ctatttataaaaaaaaattaattttttagattcattcagta----atgtacctaacctagaaata 39149704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 2229152 - 2229214
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  2229152 caaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 2229214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 442
Target Start/End: Complemental strand, 10839825 - 10839767
Alignment:
Q  384 tacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 442  Q
    |||||||| ||||||||||||| ||||||| |||| ||| ||||| ||||||| |||||    
T  10839825 tacattaattattcaatgaatctaaaaagtcaattttttcttataaataggactggagg 10839767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 362
Target Start/End: Original strand, 18959254 - 18959300
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgtac 362  Q
    ||||||| |||| ||||| |||||| |||||||||||||||||||||    
T  18959254 ttataagtaaaatttaacattttaggttcattcaataattgatgtac 18959300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 24822859 - 24822809
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||||||||||||| |||||||||||| |||  |||||| |||||    
T  24822859 cctatttataagaaaaaattgactttttagatttattgtataattaatgta 24822809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 34745320 - 34745258
Alignment:
Q  383 atacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| ||||| ||||| ||||||||| |||||||| |||||   ||||||||||||||    
T  34745320 atacattaattattctatgaaccaaaaaagtcaattgtttcttataataaggaccggagggag 34745258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 36366037 - 36366087
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||| ||||||||| |||| ||||||| ||||||||||||| ||||||||    
T  36366037 cctatatataagaaacaatttacttttttgattcattcaatagttgatgta 36366087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 43292631 - 43292569
Alignment:
Q  383 atacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| ||||| ||||| ||||||||| |||||||| |||||   ||||||||||||||    
T  43292631 atacattaattattctatgaaccaaaaaagtcaattgtttcttataataaggaccggagggag 43292569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 5888349 - 5888394
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| |||||||||| ||||||||||||||| ||| |||||||    
T  5888349 ttataagcaaaaattaacgttttagattcattcattaaatgatgta 5888394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 13841861 - 13841906
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| ||||||| |||||||| ||||||||||||| |||||||    
T  13841861 ttataagcaaaaatttactttttaaattcattcaataaatgatgta 13841906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 24820424 - 24820379
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| |||||||  ||||||||||||||||||||| |||||||    
T  24820424 ttataagcaaaaattctctttttagattcattcaataaatgatgta 24820379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 444
Target Start/End: Original strand, 24822808 - 24822869
Alignment:
Q  383 atacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 444  Q
    ||||||||| ||| |||| |||| ||||||| |||| ||| ||||| |||||||||||||||    
T  24822808 atacattaattatacaataaatctaaaaagtcaattttttcttataaataggaccggaggga 24822869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 40465373 - 40465324
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||||| |||||| ||||||||||| |||| ||||||| |||||    
T  40465373 ctatttataagagaaaatttactttttagatacattaaataatttatgta 40465324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 43932180 - 43932135
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||| |||| |||||||||||||||| ||||||| |||||    
T  43932180 ttataagaaacaattgactttttagattcattgaataattaatgta 43932135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 444
Target Start/End: Original strand, 12270138 - 12270202
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 444  Q
    ||||||||| || |||| |||| ||| |||||||||||||| | || || |||||||||||||||    
T  12270138 caaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggga 12270202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 445
Target Start/End: Complemental strand, 13014019 - 13013971
Alignment:
Q  397 caatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    |||||||| ||||||||||| ||||| ||||| |||||| |||||||||    
T  13014019 caatgaattaaaaaagtaaaatgtttcttataaataggatcggagggag 13013971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 22193690 - 22193646
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||||||| |||||||||||||||| || || |||||||    
T  22193690 tataagaaaaaattcactttttagattcattgaacaactgatgta 22193646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 40465250 - 40465358
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| |||||| ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  40465250 cctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 40465349  T
Q  410 aagtaaatt 418  Q
    |||||||||    
T  40465350 aagtaaatt 40465358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 454
Target Start/End: Original strand, 43295075 - 43295218
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||| ||| |||||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||  |||    
T  43295075 cctatttataagagaaagttaactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatataaa 43295174  T
Q  410 aagtaaattgttttttatatataggaccggagggagaatagtata 454  Q
    |||| | ||| ||||| || |||||||||||| ||| ||| ||||    
T  43295175 aagttatttg-tttttgtaaataggaccggagagagtataatata 43295218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 3e-58; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 4826774 - 4826908
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  4826774 cctatttataagaaaaagttaactttttagattcattcaataattgatgtacttagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 4826873  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  4826874 agtaaattgtttcttatatataggaccggagggag 4826908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 27231969 - 27231835
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  27231969 cctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 27231870  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| |||| |||||||||||||||||    
T  27231869 agtaaattgtttcttatgtataggaccggagggag 27231835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 32811513 - 32811379
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||    
T  32811513 cctatttataagaaaaagttaattttttagattcattcagtaattgatgtacctagcctagaaatagaccaaatacatcaattattcaatgaatcaaaaa 32811414  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| |||||||||||| |||||||||    
T  32811413 agtaaattgtttcttatatataggatcggagggag 32811379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 313 - 442
Target Start/End: Complemental strand, 1366728 - 1366599
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaag 412  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||| |||||||||||||||||||||||    
T  1366728 tatttatcagaaaaagttaactttttagattcattcaataattgatgtacctagttcagaaatagaccaaatacatcaactattcaatgaatcaaaaaag 1366629  T
Q  413 taaattgttttttatatataggaccggagg 442  Q
    |||||||||| |||||||||||||||||||    
T  1366628 taaattgtttcttatatataggaccggagg 1366599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 313 - 435
Target Start/End: Original strand, 31227507 - 31227629
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaag 412  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||  ||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  31227507 tatttataagaaaaagttaattttttagattcattcaatagttgatgtatttagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaaag 31227606  T
Q  413 taaattgttttttatatatagga 435  Q
    |||||||||| ||||||||||||    
T  31227607 taaattgtttcttatatatagga 31227629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 323 - 433
Target Start/End: Complemental strand, 42457103 - 42456993
Alignment:
Q  323 aaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttt 422  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  42457103 aaaaaattaactttttagatttattcaataattgatgtacctagcttagaaatagaccaaatacatcaactattcaatgaatcaaaaaagtaaatcgttt 42457004  T
Q  423 tttatatatag 433  Q
     ||||||||||    
T  42457003 cttatatatag 42456993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 313 - 445
Target Start/End: Complemental strand, 28020133 - 28020002
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaag 412  Q
    ||||||||| |||||||| | |||||||||||||| |||||||| |||| ||  |||||||||||| ||||||||| |||||||||||||||||||||||    
T  28020133 tatttataa-aaaaaattgattttttagattcattaaataattgttgtatctgacctagaaatagaccaaatacatcaactattcaatgaatcaaaaaag 28020035  T
Q  413 taaattgttttttatatataggaccggagggag 445  Q
    |||||||||| ||||| |||||||| |||||||    
T  28020034 taaattgtttcttataaataggaccagagggag 28020002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 28677453 - 28677318
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||||||||||||||| |||||||||||| ||| | ||||||||||| || | |||||| ||||| ||||||||| |  ||| |||||||||||||    
T  28677453 cctatttataagaaaaaattgactttttagatttattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaa 28677354  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || ||||| ||||| ||||||||||||||||    
T  28677353 aagtcaaatgtttcttataaataggaccggagggag 28677318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 36245512 - 36245377
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||||||||||||||| |||||||||||||||| | ||||||||||| || | |||||| ||||| ||||||||| |  ||| |||||||||||||    
T  36245512 cctatttataagaaaaaattgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaa 36245413  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || ||||| ||||| | ||||||||||||||    
T  36245412 aagtcaaatgtttcttataaacaggaccggagggag 36245377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 11668151 - 11668016
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| || |||||||| ||||||| | ||||||||||| || | |||||| |||||||||||| || |  ||| |||||||||||||    
T  11668151 cctatttataagaaaaatttgactttttacattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatgcaatgaatcaaaa 11668052  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || ||||| ||||| ||||||||||||||||    
T  11668051 aagtcaaatgtttcttataaataggaccggagggag 11668016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 49069080 - 49069163
Alignment:
Q  335 ttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaagtaaatt 418  Q
    |||||||||||||||||||||||| |||||| | |||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  49069080 ttttagattcattcaataattgatatacctaccatagaaatagaccaaatacatcaactattcaatgaattaaaaaagtaaatt 49069163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 315 - 441
Target Start/End: Complemental strand, 45441568 - 45441441
Alignment:
Q  315 tttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaagt 413  Q
    ||||||| ||||||||||||||||||||||| | |||||||| |||| || | |||||| ||||||||||||||| | |||| |||| ||||||||||||    
T  45441568 tttataaaaaaaaattaactttttagattcaatgaataattggtgtatcttgtctagaatatagatcaaatacatcatctatacaataaatcaaaaaagt 45441469  T
Q  414 aaattgttttttatatataggaccggag 441  Q
     || | |||  |||| ||||||||||||    
T  45441468 caaatatttcatataaataggaccggag 45441441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 445
Target Start/End: Original strand, 41850610 - 41850743
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||||||| |||| |||||||||||||| ||||||| |||||  | |  || || ||||| ||||||||| |  ||| |||||||||||||||    
T  41850610 tatttataagaaaaagttaattttttagattcattgaataattaatgtatttggtataaaatatagagcaaatacatcatttatgcaatgaatcaaaaaa 41850709  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    ||||| ||||| ||||| ||||||||||| ||||    
T  41850710 gtaaaatgtttcttataaataggaccggatggag 41850743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 428
Target Start/End: Complemental strand, 8566217 - 8566099
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| || | |||||||||||||| | ||||||||||| || | |||||| ||||| ||||||||| |  ||| |||||||||||||    
T  8566217 cctatttataagaaaaatttgattttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaa 8566118  T
Q  410 aagtaaattgttttttata 428  Q
    |||| || ||||| |||||    
T  8566117 aagttaaatgtttcttata 8566099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 441
Target Start/End: Complemental strand, 2523906 - 2523775
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| || |||||||||||||||| | ||||| |||||| | || ||||| ||||| || ||||||    ||| |||||||||||||    
T  2523906 cctatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggcatagaatatagaccagatacatcgtttatgcaatgaatcaaaa 2523807  T
Q  410 aagtaaattgttttttatatataggaccggag 441  Q
    |||| || ||||| ||||| ||| ||||||||    
T  2523806 aagtcaaatgtttcttataaataagaccggag 2523775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 316 - 442
Target Start/End: Original strand, 45533247 - 45533374
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaagta 414  Q
    ||||||||||||||| ||||||||||||||||   ||||| ||||| || | |||||| ||||| |||||||||||  ||| |||||||| ||||||||     
T  45533247 ttataagaaaaaattgactttttagattcattatgtaattaatgtatcttgtctagaatatagaccaaatacattatttatacaatgaattaaaaaagtc 45533346  T
Q  415 aattgttttttatatataggaccggagg 442  Q
    || ||||| ||||| ||| ||| |||||    
T  45533347 aaatgtttcttataaataagacaggagg 45533374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 430
Target Start/End: Original strand, 16861530 - 16861642
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaagtaaa 416  Q
    ||||| ||| |||| |||||||||||||||| |||||||||||||  ||| ||| ||||||  |  ||||||||| |||||||||||||  |||||| ||    
T  16861530 tataaaaaacaattgactttttagattcattgaataattgatgtatatagtctaaaaatagcccggatacattaattattcaatgaatc-caaaagtcaa 16861628  T
Q  417 ttgttttttatata 430  Q
    |||||| |||||||    
T  16861629 ttgtttcttatata 16861642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 438
Target Start/End: Complemental strand, 29365757 - 29365629
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||| |||||||||||||| |||||||||||||||| | ||||| |||||  | |  ||||| ||||||||||||||| |  ||| ||||| || ||||    
T  29365757 cctatatataagaaaaaattgactttttagattcattgagtaattaatgtatttggtatagaatatagatcaaatacatcatttatgcaatgtattaaaa 29365658  T
Q  410 aagtaaattgttttttatatataggaccg 438  Q
    |||| || ||||| ||||| |||||||||    
T  29365657 aagtcaaatgtttcttataaataggaccg 29365629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 30869322 - 30869222
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||  || |||||||||||||||| | ||||||||||| || | |||||| ||||| |||||||||||  ||| |||| ||||||||    
T  30869322 cctatttataagaaaattttgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacattatttatacaataaatcaaaa 30869223  T
Q  410 a 410  Q
    |    
T  30869222 a 30869222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 445
Target Start/End: Original strand, 13807256 - 13807385
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||||||| || |||||||||||||||| | |||||||| | | |    ||||| |||||||||||| || |  |||  ||||||||||||||    
T  13807256 tatttataagaaaaagttgactttttagattcattgagtaattgatcttctt----tagaatatagatcaaatatatcatttatgtaatgaatcaaaaaa 13807351  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    || || ||||| ||||| |||| |||||||||||    
T  13807352 gtcaaatgtttcttataaatagaaccggagggag 13807385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 441
Target Start/End: Original strand, 24163280 - 24163412
Alignment:
Q  311 cctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaa 408  Q
    |||||||||| ||||||| || ||||||||||||||||  |||||| ||||| || || ||||| ||||| || |||||| |  ||| |||||||| |||    
T  24163280 cctatttataggaaaaaaatttactttttagattcattgtataattaatgtatcttgcgtagaatatagaccatatacatcatttatgcaatgaattaaa 24163379  T
Q  409 aaagtaaattgttttttatatataggaccggag 441  Q
    ||||| || ||||| ||||| ||||| ||||||    
T  24163380 aaagtgaaatgtttcttataaataggtccggag 24163412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 5347735 - 5347869
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||| ||| || ||||||||||| |||||||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| |||  ||    
T  5347735 cctatttataagagaaagttgactttttagatacattcaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatc-taa 5347833  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| | || || ||||||||||||||||    
T  5347834 aagtaaattgtctcttgtaaataggaccggagggag 5347869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 438
Target Start/End: Complemental strand, 16861575 - 16861520
Alignment:
Q  383 atacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccg 438  Q
    |||||| || ||||||||||||| ||||||| |||||||||||||||||| |||||    
T  16861575 atacatcaattattcaatgaatctaaaaagtcaattgttttttatatataagaccg 16861520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 425
Target Start/End: Complemental strand, 40142909 - 40142794
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||| |||||||||||||| | |||||||||| |||  |||||| ||||| || |  ||| | ||||| |||||||||||  ||| |||||||||||||    
T  40142909 cctatgtataagaaaaaattgattttttagatttattgtataattaatgtatcttgtttaggatatagaccaaatacattatttatgcaatgaatcaaaa 40142810  T
Q  410 aagtaaattgtttttt 425  Q
    |||| || ||||||||    
T  40142809 aagtcaaatgtttttt 40142794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 420
Target Start/End: Complemental strand, 3411468 - 3411358
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||| ||| || ||||||||||| |||| ||||||  |||||||||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  3411468 cctatttataagagaaatttgactttttagatacattgaataatgtatgtacctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 3411369  T
Q  410 aagtaaattgt 420  Q
    |||||||||||    
T  3411368 aagtaaattgt 3411358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 10007712 - 10007575
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaat--caa 407  Q
    ||||||||||||||||| || ||||||||||||||||  |||||| ||||| || |  ||||| ||||| ||||||||| |  |||  |||||||   ||    
T  10007712 cctatttataagaaaaagttgactttttagattcattgtataattaatgtatcttgtgtagaatatagaccaaatacataatttatgaaatgaataaaaa 10007613  T
Q  408 aaaagtaaattgttttttatatataggaccggagggag 445  Q
    |||||| || ||||| ||||| ||||||| ||||||||    
T  10007612 aaaagtcaaatgtttattataaataggacaggagggag 10007575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 33901169 - 33901039
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaa-atacattaactattcaatgaatcaaaaaagta 414  Q
    |||||||||| | || ||||||||||||||||   ||| ||||||| |||| ||| |  || | ||| ||||||||||||||| ||||||||||||| |     
T  33901169 ttataagaaacatttgactttttagattcattatgtaaatgatgtatctagtctatatttataacaagatacattaactattctatgaatcaaaaaaatc 33901070  T
Q  415 aattgttttttatatataggaccggagggag 445  Q
    |||||||| |||||   ||||| ||||||||    
T  33901069 aattgtttcttataataaggacaggagggag 33901039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 428
Target Start/End: Complemental strand, 2400067 - 2399970
Alignment:
Q  332 actttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttata 428  Q
    ||||||||| ||| || ||||||||||||| |||| ||| || |||||| |||||||| |  ||| ||||||||||||||||| || ||||| |||||    
T  2400067 actttttaggttcgttgaataattgatgtatctagtctaaaatatagattaaatacatcatttatacaatgaatcaaaaaagtcaaatgtttcttata 2399970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 4925904 - 4925953
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||||||||| || |||||||||||||||| | |||||||||||    
T  4925904 ctatttataagaaaaatttgactttttagattcattaagtaattgatgta 4925953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 8169223 - 8169178
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||||    
T  8169223 ttataagcaaaagttaactttttagattcattcaataaatgatgta 8169178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 445
Target Start/End: Complemental strand, 12763363 - 12763230
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||| |||| |||||| ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||||    
T  12763363 tatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 12763264  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| | || || ||||||||| ||||||    
T  12763263 gtaaattgtctcttgtaaataggaccgaagggag 12763230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 445
Target Start/End: Original strand, 29365703 - 29365768
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| || |||||||||| ||||||| |||| ||| |||||||||||||  |||||||    
T  29365703 caaatacattaattactcaatgaatctaaaaagtcaattttttcttatatataggactagagggag 29365768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 358
Target Start/End: Complemental strand, 32811842 - 32811798
Alignment:
Q  314 atttataagaaaaaattaactttttagattcattcaataattgat 358  Q
    ||||||||||||||||||| |||||||||||||| | ||||||||    
T  32811842 atttataagaaaaaattaattttttagattcattgagtaattgat 32811798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 445
Target Start/End: Complemental strand, 41088917 - 41088853
Alignment:
Q  381 aaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| ||||||||||||| ||||||| |||||||| || ||   ||||||||||||||    
T  41088917 aaatacattaattattcaatgaatctaaaaagtcaattgtttcttgtaataaggaccggagggag 41088853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 43174299 - 43174347
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||  ||||||||||||||| ||| |||||||||||||    
T  43174299 tatttataagaaaattttaactttttagattaattaaataattgatgta 43174347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 414
Target Start/End: Complemental strand, 48634285 - 48634205
Alignment:
Q  334 tttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaagta 414  Q
    ||||||||||||||||||| || |||||  ||  ||| | ||||| |||||||||||  ||||||||||||| ||||||||    
T  48634285 tttttagattcattcaatatttaatgtatttaatctatatatagaccaaatacattatgtattcaatgaatctaaaaagta 48634205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 20397951 - 20397816
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| || ||||||||||| |||| ||||||  ||||| |||| | ||||  || |  |||||||| || |||| |||| ||| |||    
T  20397951 cctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaacaaaatacataaattatttaatgtatctaaa 20397852  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    || |||||||| | ||||| ||||||||||||||||    
T  20397851 aattaaattgtctcttataaataggaccggagggag 20397816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 24163332 - 24163269
Alignment:
Q  383 atacattaactattcaatgaatcaaaaaagtaaattgtttt-ttatatataggaccggagggag 445  Q
    ||||||||| ||| ||||||||| |||||||||||| ||||  |||| ||||||||||||||||    
T  24163332 atacattaattatacaatgaatctaaaaagtaaatttttttcctataaataggaccggagggag 24163269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 35427671 - 35427806
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||| |||||| |  ||||| || |||||||||||  |||||  ||| | | || ||| | ||||||||| || |||| |||| ||| |||    
T  35427671 cctatttataagataaaattgatcttttaaatacattcaataatgtatgtatatagtcaaaaacataaaccaaatacataaattatttaatgtatctaaa 35427770  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| | || || ||||||||||||||||    
T  35427771 aagtaaattgtctcttgtaaataggaccggagggag 35427806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 10007661 - 10007723
Alignment:
Q  383 atacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| ||| ||||||||| ||||||| || | ||| ||||| ||||||||||||||||    
T  10007661 atacattaattatacaatgaatctaaaaagtcaactttttcttataaataggaccggagggag 10007723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 28020013 - 28020063
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||| |||| ||||||| |||||||| |||| ||||||||    
T  28020013 cctatttataagaaacaatttacttttttgattcattgaatagttgatgta 28020063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 32811390 - 32811440
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||| ||||||||| |||| ||||||| |||||||| |||||||||||||    
T  32811390 cctatatataagaaacaatttacttttttgattcattgaataattgatgta 32811440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 445
Target Start/End: Original strand, 2523856 - 2523917
Alignment:
Q  384 tacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    |||||||| || |||||||||| ||||||| || | ||| ||||| ||||||||||||||||    
T  2523856 tacattaattactcaatgaatctaaaaagtcaactttttcttataaataggaccggagggag 2523917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 414
Target Start/End: Complemental strand, 3374506 - 3374405
Alignment:
Q  314 atttataagaaaaaatta-actttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaag 412  Q
    |||||||||| |||| || ||||||||||||||||||||| || |||||  ||| |||   ||||| |||||||||| | |||||| |||| | ||||||    
T  3374506 atttataagataaaaatatactttttagattcattcaatacttaatgtatatagtctacttatagaccaaatacattgaatattcagtgaacctaaaaag 3374407  T
Q  413 ta 414  Q
    ||    
T  3374406 ta 3374405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 10095732 - 10095777
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| |||||||||| ||||||||||||||| ||| |||||||    
T  10095732 ttataagcaaaaattaacattttagattcattcattaaatgatgta 10095777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 361
Target Start/End: Complemental strand, 21113335 - 21113294
Alignment:
Q  320 aagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||||| ||||||||||| ||||||||| |||||||    
T  21113335 aagaaaaaattagctttttagatttattcaataaatgatgta 21113294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 422
Target Start/End: Original strand, 29559520 - 29559561
Alignment:
Q  381 aaatacattaactattcaatgaatcaaaaaagtaaattgttt 422  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||    
T  29559520 aaatacattaattattcaatgaatctaaaaagtcaattgttt 29559561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 34840627 - 34840672
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| |||| || |||||||||||||||||||||| |||||||    
T  34840627 ttataagcaaaagttcactttttagattcattcaataaatgatgta 34840672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 8595161 - 8595205
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||||||| | |||||||||||||||| ||| |||||||    
T  8595161 tataagaaaaaatttattttttagattcattcattaaatgatgta 8595205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 411
Target Start/End: Original strand, 21393312 - 21393400
Alignment:
Q  324 aaaaattaactttttagattcattcaataattgatgtacctagcctagaaata-gatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||||||||||||||||  || | | |||||| | | ||| ||||| |||||||| || ||| ||||||||||||| |||||    
T  21393312 aaaaattaactttttagattcattgcatgactaatgtacatggtctataaatatgatcaaatgcaataattattcaatgaatctaaaaa 21393400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 28409598 - 28409630
Alignment:
Q  329 ttaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||||||||||||| |||||||    
T  28409598 ttaactttttagattcattcaataaatgatgta 28409630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 424
Target Start/End: Complemental strand, 28936120 - 28936076
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttt 424  Q
    |||||||||||| |||||||| |||| ||||||| ||||||||||    
T  28936120 caaatacattaattattcaataaatctaaaaagtcaattgttttt 28936076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 426
Target Start/End: Complemental strand, 29770458 - 29770342
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||  ||| || ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  29770458 cctatttataagttaaagttgactttttagatacattgaataatgcatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 29770359  T
Q  410 aagtaaattgtttttta 426  Q
    ||||||||||| |||||    
T  29770358 aagtaaattgtctttta 29770342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 440
Target Start/End: Complemental strand, 30866379 - 30866251
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||| |||| ||| || | ||||||||| |||||||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||||    
T  30866379 tatttacaagagaaagttgattttttagatacattcaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 30866280  T
Q  412 gtaaattgttttttatatataggaccgga 440  Q
    ||||||||| | || || |||||||||||    
T  30866279 gtaaattgtctcttttaaataggaccgga 30866251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 39153299 - 39153432
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctaga-aatagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||| | || ||||||| ||||||||  |||| |||||||  ||| ||| |  ||||| ||||||||| || || |||||||| | |||    
T  39153299 cctatttataagaaacatttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacatcaattactcaatgaagctaaa 39153398  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| |||  ||||||||| ||| ||||| ||||||    
T  39153399 aagtcaat--ttttttataaataagaccgaagggag 39153432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 428
Target Start/End: Complemental strand, 48446030 - 48445978
Alignment:
Q  376 agatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttata 428  Q
    ||||||||||||| || |||||||| |||| |||||||||||| || ||||||    
T  48446030 agatcaaatacatcaattattcaataaatctaaaaagtaaatttttctttata 48445978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 3e-58; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 47678391 - 47678257
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  47678391 cctatttataagaaaaatttaacttttgagattcattcaataattgatgtacctaacctagaaatagatcaaatacatcaactattcaatgaatcaaaaa 47678292  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  47678291 agtaaattgtttcttatatataggaccggagggag 47678257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 43929481 - 43929347
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |||||||||||||    
T  43929481 cctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcttagaaatagaccaaatacatcaactatttaatgaatcaaaaa 43929382  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  43929381 agtaaattgtttcttatatataggaccggagggag 43929347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 34662695 - 34662828
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  34662695 ctatttataaaaaaaagttaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaaa 34662794  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| ||||||||| ||||||||||||    
T  34662795 gtaaattgtttcttatatataagaccggagggag 34662828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 47844546 - 47844680
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||    
T  47844546 cctatttataagaaaaatttaacttttgagattcattcaataattgatgtacctaacctagaaatagatcaaatatatcaactattcaatgaatcaaaaa 47844645  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| |||||||||||| |||||||||    
T  47844646 agtaaattgtttcttatatataggatcggagggag 47844680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 49944845 - 49944977
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||| || | |||||| ||||| ||||||||| |  ||| |||||||||||||    
T  49944845 cctatttataagaaaaatttaactttttagattcattgaataattgatgtatcttgtctagaatatagaccaaatacatcatttatacaatgaatcaaaa 49944944  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    || | || ||||| || || |||||||||||||    
T  49944945 aaatcaaatgtttcttgtaaataggaccggagg 49944977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 519969 - 519834
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||  ||||||||||||||||||| | ||||||||||| ||   |||||| ||||||||||||||| |  ||| |||| ||||||||    
T  519969 cctatttataagaaaattttaactttttagattcattgagtaattgatgtatcttatctagaatatagatcaaatacatcatttatacaataaatcaaaa 519870  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || ||||| ||||| ||||||||||||||||    
T  519869 aagtcaaatgtttattataaataggaccggagggag 519834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 38040412 - 38040277
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| || |||||||||||||||| | ||||||||||| || | |||||| |||||||||||| || |  ||| |||||||||||||    
T  38040412 cctatttataagaaaaatttgactttttagattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatgcaatgaatcaaaa 38040313  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || ||||| ||||| ||||||||| ||||||    
T  38040312 aagtcaaatgtttcttataaataggaccgaagggag 38040277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 26924225 - 26924360
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| || |||||||| ||||||| | | ||| |||||| | |  ||||| ||||| ||||||||| |  |||||||||||||||||    
T  26924225 cctatttataagaaaaagttgactttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcatttattcaatgaatcaaaa 26924324  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || ||||| ||||| ||||||||||||||||    
T  26924325 aagtcaaatgtttcttataaataggaccggagggag 26924360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 312 - 442
Target Start/End: Complemental strand, 38590203 - 38590070
Alignment:
Q  312 ctatttataagaaaaaa--ttaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaa 408  Q
    |||||||||||||||||  ||||||||||||||||||| | ||||||||||| || |  ||||| ||||| |||||||||||  |||  |||||||||||    
T  38590203 ctatttataagaaaaaaaattaactttttagattcattgagtaattgatgtatctggtatagaatatagaccaaatacattatttatgaaatgaatcaaa 38590104  T
Q  409 aaagtaaattgttttttatatataggaccggagg 442  Q
    ||||| || || || |||||||||| ||||||||    
T  38590103 aaagtcaaatgcttcttatatatagaaccggagg 38590070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 313 - 442
Target Start/End: Complemental strand, 44939200 - 44939070
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||| |||||| | |||||||||||||| | ||||||||||| |||  |||||| ||||| ||||||||| |  ||| |||||||| ||||||    
T  44939200 tatttataagagaaaattgattttttagattcattgagtaattgatgtatctaatctagaatatagaccaaatacatcatttatacaatgaataaaaaaa 44939101  T
Q  412 gtaaattgttttttatatataggaccggagg 442  Q
    || || ||||| ||||| |||||||||||||    
T  44939100 gtcaaatgtttcttataaataggaccggagg 44939070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 441
Target Start/End: Original strand, 26070838 - 26070967
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||  ||| || |||||||||||||||| | ||||||||||| ||   |||||| ||||| |||||||||||  ||| |||||||||||||||    
T  26070838 tatttataagtgaaatttgactttttagattcattgagtaattgatgtatcttatctagaatatagaccaaatacattatttatgcaatgaatcaaaaaa 26070937  T
Q  412 gtaaattgttttttatatataggaccggag 441  Q
    ||||| ||||| ||||| ||| ||||||||    
T  26070938 gtaaaatgtttcttataaataagaccggag 26070967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 435
Target Start/End: Complemental strand, 38738067 - 38737942
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||||||||| || | |||||| ||| | |||||||||    ||| |||||||||||||    
T  38738067 cctatttataagaaaaatttaactttttagattcattgagtaattgatgtatcttgtctagaatataaaccaaatacatcctttatgcaatgaatcaaaa 38737968  T
Q  410 aagtaaattgttttttatatatagga 435  Q
    |||| || ||||| ||||| ||||||    
T  38737967 aagtcaaatgtttcttataaatagga 38737942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 444
Target Start/End: Complemental strand, 26760309 - 26760175
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||||||||||||||| | |||||| ||||||| | | ||| |||||| | |  ||||| ||||| ||||||||| |  |||||||||||||||||    
T  26760309 cctatttataagaaaaaattgattttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcatttattcaatgaatcaaaa 26760210  T
Q  410 aagtaaattgttttttatatataggaccggaggga 444  Q
    |||| || ||||| ||||| |||||||| ||||||    
T  26760209 aagtcaaatgtttcttataaataggacccgaggga 26760175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 313 - 447
Target Start/End: Original strand, 8971242 - 8971377
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||||||||||||||||| || ||||||||||| | ||||| |||||  |  | ||||| |||||||||| || |||  ||| |||||||||||||||    
T  8971242 tatttataagaaaaaattaagttgttagattcattgagtaattaatgtatttgacatagaatatagatcaaacacgttatttatgcaatgaatcaaaaaa 8971341  T
Q  412 gtaaattgttttttatatataggaccggagggagaa 447  Q
    || || | ||| ||||| |||||||| |||||||||    
T  8971342 gtcaaatatttcttataaataggacctgagggagaa 8971377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 317 - 443
Target Start/End: Original strand, 34332494 - 34332621
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaagtaa 415  Q
    ||||||||||  || |||||||||||||||| | |||||||||||  | | |||||| ||||| ||||||||| |  ||| ||||||||||||||||| |    
T  34332494 tataagaaaactttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatccaatgaatcaaaaaagtca 34332593  T
Q  416 attgttttttatatataggaccggaggg 443  Q
    | ||||| ||||| |||||||| |||||    
T  34332594 aatgtttcttataaataggaccagaggg 34332621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 428
Target Start/End: Complemental strand, 37515226 - 37515108
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||| |||||  | | || ||| || ||| ||||||||||  ||| |||| ||| ||||    
T  37515226 cctatttataagaaaaatttaactttttagattcattaagtaattaatgtatgttgtctggaatatggattaaatacattatttatgcaataaataaaaa 37515127  T
Q  410 aagtaaattgttttttata 428  Q
    |||| || |||||||||||    
T  37515126 aagttaaatgttttttata 37515108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 51590561 - 51590431
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaa-atacattaactattcaatgaatcaaaaaagta 414  Q
    |||||||||||| || || |||||||||||||   ||| ||||||| |||| ||| |  || | ||| ||||||||| ||||| ||||| |||||||||     
T  51590561 ttataagaaaaagttgaccttttagattcattgtgtaagtgatgtatctagtctatatttataacaagatacattaattattctatgaaccaaaaaagtc 51590462  T
Q  415 aattgttttttatatataggaccggagggag 445  Q
    ||||||||||||||   ||||||||||||||    
T  51590461 aattgttttttataataaggaccggagggag 51590431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 10256794 - 10256839
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||    
T  10256794 ttataagaaaaaattcactttttagattcattcaataaatgatgta 10256839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 5431466 - 5431422
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||| |||||||||||||||||||||||||||||| |||||||    
T  5431466 tataagcaaaaattaactttttagattcattcaataaatgatgta 5431422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 440
Target Start/End: Original strand, 6793608 - 6793736
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctaga-aatagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||||||| |||| |||||| ||||||| ||||||| |||||| |||  || |  |||| |||||||||| |  ||| |||||||||| ||||    
T  6793608 tatttataagaaaaagttaattttttaaattcattgaataattaatgtacttagtatatattataggtcaaatacatcatttatgcaatgaatcataaaa 6793707  T
Q  412 gtaaattgttttttatatataggaccgga 440  Q
    || || ||||| || || |||||||||||    
T  6793708 gttaaatgtttcttttaaataggaccgga 6793736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 9301931 - 9302063
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| | | |||||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  9301931 cctatttacaagagacagttaactttttagatacattaaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 9302030  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| | ||||| |||||||||||||    
T  9302031 aagtaaattgtctcttataaataggaccggagg 9302063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 10065267 - 10065399
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| |||||| | ||||||||| |||| ||||||  ||||| || | | ||||  || ||||||||||| || |||| |||| ||| |||    
T  10065267 cctatttacaagagaaaattgattttttagatacattgaataatgtatgtatctcgtcaagaacctaaatcaaatacataaattatttaatgtatctaaa 10065366  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    |||||||||||||||| || |||||| ||||||    
T  10065367 aagtaaattgttttttgtaaataggatcggagg 10065399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 23923562 - 23923690
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| || | |||||||||||||| | ||||| |||||  | | |||||| ||||| ||||| ||| |  ||| |||||||||| ||    
T  23923562 cctatttataagaaaaatttgaatttttagattcattgagtaattaatgtatattgtctagaatatagaccaaatgcatcatttatgcaatgaatcagaa 23923661  T
Q  410 aagtaaattgttttttatatataggaccg 438  Q
    ||||||||| ||| ||||| ||| |||||    
T  23923662 aagtaaattttttcttataaataagaccg 23923690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 435
Target Start/End: Original strand, 34146881 - 34146941
Alignment:
Q  375 tagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatatagga 435  Q
    ||||||||||||||||| ||||||||||||||||||| | |||| ||| ||||| ||||||    
T  34146881 tagatcaaatacattaattattcaatgaatcaaaaaaatcaattttttcttataaatagga 34146941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 45848953 - 45849001
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  45848953 tatttataagaaacaattaactttttatattcatttaataattgatgta 45849001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 439
Target Start/End: Complemental strand, 47912950 - 47912824
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| || |||||||| ||| |||  |||||| ||||| || | |||| | ||||||||||||||||  ||| |||| |||||||||    
T  47912950 cctatttataagaaaaa-ttgactttttaaatttattgtataattaatgtatcttgtctagta-tagatcaaatacattatttatacaataaatcaaaaa 47912853  T
Q  411 agtaaattgttttttatatataggaccgg 439  Q
    ||| || | ||| ||||| ||||||||||    
T  47912852 agtcaaatatttcttataaataggaccgg 47912824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 358
Target Start/End: Complemental strand, 29892266 - 29892219
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgat 358  Q
    |||||||||| |||| |||| |||||||||||||||||||||||||||    
T  29892266 cctatttataggaaacaattgactttttagattcattcaataattgat 29892219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 375 - 442
Target Start/End: Complemental strand, 49184310 - 49184243
Alignment:
Q  375 tagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||||||||| |||| |||||||  ||||| |||||| ||||||||| ||||||| |||||    
T  49184310 tagatcaaatacattaattattaaatgaatttaaaaaataaattattttttataaataggactggagg 49184243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 50155434 - 50155384
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||||| || |||||||||||||||| | |||||||||||    
T  50155434 cctatttataagaaaaagttgactttttagattcattgagtaattgatgta 50155384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 1409176 - 1409131
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| |||||||| ||||||||||||||||||||| |||||||    
T  1409176 ttataagcaaaaattatctttttagattcattcaataaatgatgta 1409131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 315 - 438
Target Start/End: Original strand, 11386170 - 11386294
Alignment:
Q  315 tttataagaaaaaattaactttt-tagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaag 412  Q
    |||||||||||||||| | |||| |||||||||| ||||||||||||  || | |||||| |||||  |||||||| |  ||| ||||||||| ||||||    
T  11386170 tttataagaaaaaattgatttttttagattcattgaataattgatgtttctggtctagaatatagacgaaatacatcatttatgcaatgaatc-aaaaag 11386268  T
Q  413 taaattgttttttatatataggaccg 438  Q
    | || ||||| ||||| |||||||||    
T  11386269 tcaaatgtttcttataaataggaccg 11386294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 433
Target Start/End: Complemental strand, 26545131 - 26545010
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaat-agatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||| |||| ||| || ||||||||||| |||| ||||||  ||||| |||| | |||| | | | ||||||||| || |||| |||||||| |||||    
T  26545131 tatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacttaaaccaaatacataaattatttaatgaatctaaaaa 26545032  T
Q  412 gtaaattgttttttatatatag 433  Q
    ||||||||| ||||||| ||||    
T  26545031 gtaaattgtattttataaatag 26545010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 5368904 - 5368856
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||| ||||||||||||||||||| |||| ||||||| |||||    
T  5368904 tatttataagcaaaaattaactttttagatgcattgaataattaatgta 5368856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 347
Target Start/End: Complemental strand, 7375605 - 7375569
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcatt 347  Q
    |||||||||||||||||||| ||||||||||||||||    
T  7375605 cctatttataagaaaaaattgactttttagattcatt 7375569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 9548740 - 9548676
Alignment:
Q  378 atcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| || |||| |||| ||| |||||||||||||||| || || |||||||||||||    
T  9548740 atcaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagg 9548676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 442
Target Start/End: Complemental strand, 14281726 - 14281594
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| | | || ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || ||||||||| ||| |||    
T  14281726 cctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaa 14281627  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| | || || |||||||||||||    
T  14281626 aagtaaattgtctcttgtaaataggaccggagg 14281594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 25021245 - 25021293
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||| || | |||||||||||||||| |||||||||||||    
T  25021245 tatttataagaaacaaatgactttttagattcattgaataattgatgta 25021293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 358
Target Start/End: Original strand, 26823149 - 26823196
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgat 358  Q
    ||||||||||| ||||||||||||||||| ||| ||| ||||||||||    
T  26823149 cctatttataataaaaaattaactttttaaatttattgaataattgat 26823196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 441
Target Start/End: Complemental strand, 29256734 - 29256606
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| || |||||||||||||||| | ||||| ||||   | |  || ||  ||| ||||||||| |  ||| ||||||||||||||    
T  29256734 cctatttataagaaaaagttgactttttagattcattgagtaattaatgtttttggtataaaataagaccaaatacatcatttatgcaatgaatcaaaaa 29256635  T
Q  411 agtaaattgttttttatatataggaccggag 441  Q
    |  ||| ||||| ||||| ||||||||||||    
T  29256634 a--aaaatgtttcttataaataggaccggag 29256606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 358
Target Start/End: Complemental strand, 6340697 - 6340655
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgat 358  Q
    ||||||| ||||||||||||||||| |||||||||||| ||||    
T  6340697 ttataagcaaaaattaactttttaggttcattcaataaatgat 6340655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 23923406 - 23923456
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||||| || | ||||||||||| || |||||||||||||    
T  23923406 cctatttataagaaaaatttgaatttttagattcgttgaataattgatgta 23923456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 440
Target Start/End: Original strand, 28359083 - 28359213
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatc-aaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||| ||| || | ||||||||| |||| ||||||  ||||| |||| | ||||  | | | |||||||| || |||| |||| ||| |||    
T  28359083 cctatttataagagaaagttgattttttagatacattgaataatatatgtatctagtcaagaaccaaaaccaaatacataaattatttaatgtatctaaa 28359182  T
Q  410 aagtaaattgttttttatatataggaccgga 440  Q
    ||||||||||||| || || |||||||||||    
T  28359183 aagtaaattgtttcttgtaaataggaccgga 28359213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 34146940 - 34146890
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||||||||||||| | ||||| |||||||| ||||||| |||||    
T  34146940 cctatttataagaaaaaattgatttttttgattcattgaataattaatgta 34146890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 38830549 - 38830487
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  38830549 caaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 38830487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 346
Target Start/End: Original strand, 640536 - 640569
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcat 346  Q
    |||||||||||||||||| |||||||||||||||    
T  640536 tatttataagaaaaaattgactttttagattcat 640569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 353
Target Start/End: Original strand, 5431354 - 5431391
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataa 353  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  5431354 ttataagcaaaaattcactttttagattcattcaataa 5431391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 6079190 - 6079145
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||  || ||||||||||||||||||| |||||||    
T  6079190 ttataagaaaaaatccaccttttagattcattcaataaatgatgta 6079145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 361
Target Start/End: Original strand, 6156655 - 6156692
Alignment:
Q  324 aaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  6156655 aaaaatcaactttttagattcattcaataaatgatgta 6156692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 19175715 - 19175670
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| ||||||  |||||||||||||||||||||| |||||||    
T  19175715 ttataagcaaaaatctactttttagattcattcaataaatgatgta 19175670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 25021366 - 25021317
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| |||||| |||| |||||||||||| ||| |||||||||||||    
T  25021366 ctatttacaagaaacaattgactttttagatttattgaataattgatgta 25021317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 25554556 - 25554601
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| ||||| |||||||||||||||||| ||||| |||||||    
T  25554556 ttataagcaaaaaataactttttagattcattgaataaatgatgta 25554601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 349
Target Start/End: Original strand, 28038840 - 28038873
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattca 349  Q
    ||||||| ||||||||||||||||||||||||||    
T  28038840 ttataagcaaaaattaactttttagattcattca 28038873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 445
Target Start/End: Complemental strand, 28989338 - 28989273
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| || |||| |||| ||| |||||||||||||||| || || ||||||||| ||||||    
T  28989338 caaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccgaagggag 28989273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 34597533 - 34597578
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| ||||||| ||||||||||||||||||| || |||||||    
T  34597533 ttataagcaaaaattcactttttagattcattcaacaaatgatgta 34597578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 353
Target Start/End: Complemental strand, 39940613 - 39940576
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataa 353  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  39940613 ttataagtaaaaatttactttttagattcattcaataa 39940576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 445
Target Start/End: Original strand, 47911927 - 47911992
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| |||| |||||||||||||||| | || ||  ||||| ||| ||||||||||||    
T  47911927 caaatacattaaatattgaatgaatcaaaaaagtgattttttgcttataaatatgaccggagggag 47911992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 1811321 - 1811277
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||| ||||||| | |||||||||||||| |||||||||||||    
T  1811321 tataagcaaaaattcattttttagattcattaaataattgatgta 1811277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 445
Target Start/End: Complemental strand, 2351182 - 2351134
Alignment:
Q  397 caatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||||||||| || ||||| ||||| |||||| |||||||||    
T  2351182 caatgaatcaaaaaagttaaatgtttcttataaataggatcggagggag 2351134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 7230031 - 7230067
Alignment:
Q  325 aaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||||||||||||||| | |||||||    
T  7230031 aaaattaactttttagattcattcaattaatgatgta 7230067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 356
Target Start/End: Original strand, 18744576 - 18744616
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattg 356  Q
    |||||||||||| || |||||||||||||||| ||||||||    
T  18744576 ttataagaaaaagttgactttttagattcattgaataattg 18744616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 442
Target Start/End: Complemental strand, 23398200 - 23398084
Alignment:
Q  327 aattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaaaagtaaattgtttttt 425  Q
    |||| ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || ||||||||| ||| ||||||||| |||| | ||    
T  23398200 aattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaaaagtaagttgtctctt 23398101  T
Q  426 atatataggaccggagg 442  Q
     || |||||||||||||    
T  23398100 gtaaataggaccggagg 23398084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 27819446 - 27819398
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||| |||||||| ||||||||||||||||||| |||| ||| ||||    
T  27819446 tatttacaagaaaaatttaactttttagattcattgaatatttggtgta 27819398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 29312507 - 29312443
Alignment:
Q  378 atcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| | || || |||||||||||||    
T  29312507 atcaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 29312443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 29892225 - 29892277
Alignment:
Q  393 tattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    |||| |||||||| ||||||| ||||||||  |||| ||||||||||||||||    
T  29892225 tattgaatgaatctaaaaagtcaattgtttcctataaataggaccggagggag 29892277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 34597639 - 34597595
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||| ||||||| ||||||||||||||||||| || |||||||    
T  34597639 tataagcaaaaattcactttttagattcattcaacaaatgatgta 34597595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 47883977 - 47884025
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||||||||||| |||||||| ||| ||| | |||||||||||    
T  47883977 tatttataagaaaaaattgactttttaaattaatttagtaattgatgta 47884025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 47946013 - 47946057
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataatt 355  Q
    ||||||||||||||||  || |||||||||||||||| |||||||    
T  47946013 cctatttataagaaaagcttgactttttagattcattaaataatt 47946057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 442
Target Start/End: Original strand, 50155374 - 50155442
Alignment:
Q  374 atagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 442  Q
    ||||| ||||||||| || || |||||||||| ||||||| || | ||| ||||| |||||||||||||    
T  50155374 atagaccaaatacatcaattactcaatgaatctaaaaagtcaactttttcttataaataggaccggagg 50155442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 7e-56; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 29031172 - 29031038
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  29031172 cctatttataagaaaaagttaactttttagattcattcaacaattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 29031073  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||| ||||||||||||    
T  29031072 agtaaattgtttcttatatataagaccggagggag 29031038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 22731394 - 22731260
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||| |||||||||||||| ||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  22731394 cctatttataagaaaaagttaattttttagattcattaaataattaatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 22731295  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| ||||||||||||||||||||||    
T  22731294 agtaaattgtttcttatatataggaccggagggag 22731260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 312 - 445
Target Start/End: Complemental strand, 1015290 - 1015157
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||| | |||||||||| ||||||||| ||||||||||||||||||||||    
T  1015290 ctatttataagaaaaagttaactttttagattcattcaataatcgatgtacctaacttagaaatagaccaaatacatcaactattcaatgaatcaaaaaa 1015191  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| ||||||||||||||||||||||    
T  1015190 gtaaattgtttcttatatataggaccggagggag 1015157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 15968323 - 15968457
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  15968323 cctatttataagaaaaagttaattttttagattcattcaataattaatgtatctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 15968422  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||| |||||||||||||| |||||||    
T  15968423 agtaaattgtttcttatatataggacctgagggag 15968457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 311 - 441
Target Start/End: Original strand, 27488359 - 27488489
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||| || ||||||| |||||||||||||    
T  27488359 cctatttataagaaaaaattaattttttagattcattcaataattgatgtatctagcctagaaatagaccaaatatatcaactattgaatgaatcaaaaa 27488458  T
Q  411 agtaaattgttttttatatataggaccggag 441  Q
    |||||||||||| ||||||||||||||||||    
T  27488459 agtaaattgtttcttatatataggaccggag 27488489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 313 - 445
Target Start/End: Original strand, 26327549 - 26327682
Alignment:
Q  313 tatttataagaaaa-aattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||| ||||||| ||||||||| ||||||||||| ||||||||||    
T  26327549 tatttataagaaaaaaattaactttttagattcattcaataattgatgtacctaatctaaaaatagaccaaatacatcaactattcaataaatcaaaaaa 26327648  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    ||||||| ||| |||||||||| |||||||||||    
T  26327649 gtaaattctttcttatatatagaaccggagggag 26327682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 313 - 441
Target Start/End: Complemental strand, 1138351 - 1138223
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaag 412  Q
    |||||||||||||||||| | |||||| ||||||| ||||||| ||||| |||| ||||||||||| |||||||||||| |||||||| |||||||||||    
T  1138351 tatttataagaaaaaattgattttttaaattcattaaataattaatgtatctagactagaaatagaccaaatacattaattattcaataaatcaaaaaag 1138252  T
Q  413 taaattgttttttatatataggaccggag 441  Q
    |||||||||| ||||| ||||||||||||    
T  1138251 taaattgtttcttataaataggaccggag 1138223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 38394440 - 38394575
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||||||||||||||| |||||||||||||||| ||||||| |||||| | |  |||||  |||| ||||||||| |  ||| |||||||||||||    
T  38394440 cctatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatgcaatgaatcaaaa 38394539  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||| ||||| ||||| |||||| || ||||||    
T  38394540 aagtaaaatgtttcttataaataggatcgaagggag 38394575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 312 - 445
Target Start/End: Complemental strand, 13789867 - 13789733
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||| || |||||| ||||||||| ||||||| |||||| | |  |||||  |||| ||||||||| |  ||| ||||||||||||||    
T  13789867 ctatttataagaaaaagttgacttttcagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatgcaatgaatcaaaaa 13789768  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||| ||||| ||||| ||||||||||||||||    
T  13789767 agtaaaatgtttcttataaataggaccggagggag 13789733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 311 - 444
Target Start/End: Complemental strand, 5002276 - 5002142
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||  || |||||||||||| ||| | ||||||||||| || | ||| || ||||||||||||||| |  ||| |||| ||||||||    
T  5002276 cctatttataagaaaatttttactttttagatttattgagtaattgatgtatcttgtctaaaatatagatcaaatacatcatttatgcaattaatcaaaa 5002177  T
Q  410 aagtaaattgttttttatatataggaccggaggga 444  Q
    |||| || ||||| ||||| |||||||||||||||    
T  5002176 aagtcaaatgtttcttataaataggaccggaggga 5002142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 437
Target Start/End: Original strand, 18473487 - 18473614
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||| ||| ||| || |||||||||||||||| | ||||||||||| || | |||||| ||||||||||| ||| |  ||| |||||||||||||    
T  18473487 cctatttatgagagaaatttgactttttagattcattgagtaattgatgtatcttgtctagaatatagatcaaatgcatcatttatacaatgaatcaaaa 18473586  T
Q  410 aagtaaattgttttttatatataggacc 437  Q
    |||| || ||||| ||||| ||||||||    
T  18473587 aagtcaaatgtttcttataaataggacc 18473614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 315 - 445
Target Start/End: Original strand, 33478121 - 33478254
Alignment:
Q  315 tttataagaaaaaa--ttaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||||||  || | |||||||||||||| | ||||||||||| || | |||||| ||||  ||||||||| |  ||| ||||||||||||||     
T  33478121 tttataagaaaaaaatttgaatttttagattcattgagtaattgatgtatctcgtctagaatataggccaaatacatcatttatgcaatgaatcaaaaat 33478220  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    || || ||||| ||||| ||||||||||||||||    
T  33478221 gtcaaatgtttcttataaataggaccggagggag 33478254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 442
Target Start/End: Complemental strand, 1643480 - 1643348
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||| | | || ||||||||||| |||||||||||  ||||| |||| | ||||  || ||||||||||| || | ||||||| ||| |||    
T  1643480 cctatttataagagacagttgactttttagatacattcaataatgtatgtatctagtcaagaatctaaatcaaatacataaatttttcaatgtatctaaa 1643381  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| | || || |||||||||||||    
T  1643380 aagtaaattgtctattgtaaataggaccggagg 1643348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 445
Target Start/End: Original strand, 22101922 - 22102055
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||||||| || | ||||||||||||||   ||||| ||||| || | ||| || |||||||||||||||||  ||| |||| ||||||||||    
T  22101922 tatttataagaaaaatttgattttttagattcattgtgtaattaatgtatcttgtctaaaatatagatcaaatacattatttatacaataaatcaaaaaa 22102021  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    || || | ||| ||||| ||| || |||||||||    
T  22102022 gtcaaatatttcttataaatatgatcggagggag 22102055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 36434812 - 36434764
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||| ||||||||||||||||||| | |||||||||||    
T  36434812 tatttataagaaaaatttaactttttagattcattaagtaattgatgta 36434764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 445
Target Start/End: Complemental strand, 919754 - 919643
Alignment:
Q  335 ttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatatag 433  Q
    ||||||||||||| | ||||||||||| ||||  ||||| ||||| ||||||||| |  |||| |||||||||||||||| || | |||  ||||||||     
T  919754 ttttagattcattgagtaattgatgtatctagtatagaatatagaccaaatacatcatttattgaatgaatcaaaaaagtcaaatatttcctatatatat 919655  T
Q  434 gaccggagggag 445  Q
    ||||||| ||||    
T  919654 gaccggatggag 919643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 413
Target Start/End: Original strand, 22398066 - 22398156
Alignment:
Q  324 aaaaattaactttttagattcattcaataattgatgtacctagcctagaaata-gatcaaatacattaactattcaatgaatcaaaaaagt 413  Q
    ||||| |||||||||||||| ||| |||||||  ||||  ||| ||| ||||| || |||||||||||| ||||||||||||| |||||||    
T  22398066 aaaaaataactttttagatttattgaataattattgtatatagtctataaatatgaccaaatacattaattattcaatgaatctaaaaagt 22398156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 3100418 - 3100463
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||    
T  3100418 ttataagcaaaaattaacattttagattcattcaataaatgatgta 3100463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 445
Target Start/End: Original strand, 31803040 - 31803105
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| || |||| |||| ||| |||||||||||||||| || || ||||||||||||||||    
T  31803040 caaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggag 31803105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 445
Target Start/End: Original strand, 36417129 - 36417194
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| || |||| |||| ||| |||||||||||||||| ||||| |||||||| |||||||    
T  36417129 caaatacataaattatttaatgtatctaaaaagtaaattgtttcttataaataggaccagagggag 36417194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 445
Target Start/End: Complemental strand, 38394490 - 38394429
Alignment:
Q  384 tacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    |||||||| ||||||||||||| ||||||| |||| ||| ||||| |||||| |||||||||    
T  38394490 tacattaattattcaatgaatctaaaaagtcaattttttcttataaataggatcggagggag 38394429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 12676179 - 12676123
Alignment:
Q  376 agatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatata 432  Q
    |||||||||||||||  ||||||||||||| ||||| ||| || |||||||||||||    
T  12676179 agatcaaatacattagttattcaatgaatctaaaaattaattttttttttatatata 12676123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 442
Target Start/End: Complemental strand, 41989700 - 41989568
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| || ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  41989700 cctatttaaaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 41989601  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| | || || |||||||||||||    
T  41989600 aagtaaattgtctcttgtaaataggaccggagg 41989568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 418
Target Start/End: Complemental strand, 892678 - 892575
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaagta 414  Q
    ||||||| ||||||| |||||| | ||||||| |||||  |||||| ||||  || |  ||||| |||||||||||| ||||||||||||| |||||||     
T  892678 ttataagcaaaaatttacttttaaaattcattgaataacggatgtatctagtatatagtatagaacaaatacattaattattcaatgaatctaaaaagtg 892579  T
Q  415 aatt 418  Q
    ||||    
T  892578 aatt 892575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 3814103 - 3814056
Alignment:
Q  315 tttataagaaaaaattaactttttagattcattcaataattgatgtac 362  Q
    |||||||||||||||| ||||||||||||| || ||||||| ||||||    
T  3814103 tttataagaaaaaattgactttttagattcgttgaataattaatgtac 3814056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 6338327 - 6338462
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||||||||  || || ||||||||||| |||| ||||||  ||||| |||  | ||||  || | ||||||||| || |||| |||| ||| |||    
T  6338327 cctatttataagaggaagttgactttttagatacattgaataatgtatgtatctaatcaagaacctaaaccaaatacataaattatttaatgtatctaaa 6338426  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| |||| || ||||||| ||||||||    
T  6338427 aagtaaattgtcttttgtaaataggactggagggag 6338462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 445
Target Start/End: Complemental strand, 7053716 - 7053649
Alignment:
Q  378 atcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| | || || ||||||||||||||||    
T  7053716 atcaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggag 7053649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 7750054 - 7749919
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| || ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  7750054 cctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattatttaatgtatctaaa 7749955  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    || |||||||| | || || ||||||||||||||||    
T  7749954 aattaaattgtctcttgtaaataggaccggagggag 7749919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 18353220 - 18353355
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| || | |||||| || |||| ||||||  ||||| |||| | |||| ||| | ||||||||| || |||| |||| ||| |||    
T  18353220 cctatttacaagagaaagttgattttttacatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaattatttaatgtatctaaa 18353319  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||||| || || |||||| |||||||||    
T  18353320 aagtaaattgtttcttgtaaataggatcggagggag 18353355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 411
Target Start/End: Original strand, 20269453 - 20269551
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaata-gatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||||||||  ||||||||||||  ||| ||||||||||||| ||  |||| ||||| ||  ||||||||||| ||||||||| ||| |||||    
T  20269453 tatttataagaaaaaac-aactttttagatatattgaataattgatgtatctgacctacaaatatgacgaaatacattaattattcaatgtatctaaaaa 20269551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 21488419 - 21488284
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| |||| |||||| | |||||   ||||| |||||  | | |||||| ||||| |||||||||||  ||| |||||||| ||||    
T  21488419 cctatttataagaaaaagttaattttttaaactcattatgtaattaatgtattttgtctagaatatagaccaaatacattatttatgcaatgaattaaaa 21488320  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || | ||| ||||| |||||||  |||||||    
T  21488319 aagtcaaatatttcttataaataggacatgagggag 21488284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 451
Target Start/End: Complemental strand, 23411299 - 23411160
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||| |||| |||||| | ||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||||    
T  23411299 tatttacaagagaaaattgattttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 23411200  T
Q  412 gtaaattgttttttatatataggaccggagggagaatagt 451  Q
    |||| |||| | ||||| ||| |||||||||||| |||||    
T  23411199 gtaatttgtatcttataaatatgaccggagggagtatagt 23411160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 445
Target Start/End: Complemental strand, 7945952 - 7945838
Alignment:
Q  332 actttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatata 430  Q
    ||||||||||| |||| ||||||  ||||| |||| | ||||  || | |||||| || || |||| |||| ||| |||||||||||||||| || || |    
T  7945952 actttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatatataaattatttaatgtatctaaaaagtaaattgtttcttgtaaa 7945853  T
Q  431 taggaccggagggag 445  Q
    |||||||||||||||    
T  7945852 taggaccggagggag 7945838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 11142428 - 11142510
Alignment:
Q  363 ctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    |||| |||||||||||   ||||||| || ||||||||||||||||||| | |||||||| ||||| |||  | |||||||||    
T  11142428 ctagtctagaaatagacttaatacatcaattattcaatgaatcaaaaaaatgaattgtttcttataaatataatcggagggag 11142510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 25027760 - 25027698
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  25027760 caaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 25027698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 36417183 - 36417133
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||||| |||| ||||||||||| |||| ||||||| |||||    
T  36417183 cctatttataagaaacaatttactttttagatacattaaataatttatgta 36417133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 440
Target Start/End: Original strand, 37699792 - 37699922
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| | | || ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || ||||||||| ||| |||    
T  37699792 cctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaa 37699891  T
Q  410 aagtaaattgttttttatatataggaccgga 440  Q
    ||||||||||| | || || |||||||||||    
T  37699892 aagtaaattgtctcttgtaaataggaccgga 37699922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 892564 - 892609
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| ||||||| |||||||||||||||| ||||||| |||||    
T  892564 ttataagcaaaaattcactttttagattcattgaataattaatgta 892609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 445
Target Start/End: Original strand, 904048 - 904113
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| || |||| |||| ||| |||||||||||||||| || || |||| |||||||||||    
T  904048 caaatacataaattatttaatgtatctaaaaagtaaattgtttattgtaaatagaaccggagggag 904113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 1098641 - 1098686
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| |||| || |||||||||||||||||||||| |||||||    
T  1098641 ttataagtaaaagttgactttttagattcattcaataaatgatgta 1098686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 5110663 - 5110618
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||| ||||| |||||||||| |||||||||||| |||||||    
T  5110663 ttataagagaaaatgaactttttaggttcattcaataaatgatgta 5110618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 11931981 - 11932114
Alignment:
Q  311 cctatttataagaaaaaa-ttaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaa 408  Q
    |||||||||||||||||| || ||||||||||||||||   ||||| ||||| || | ||| || ||||| ||||||||| |  |||  ||| |||||||    
T  11931981 cctatttataagaaaaaaattgactttttagattcattgtgtaattaatgtatcttgtctaaaatatagaccaaatacatcatttatataataaatcaaa 11932080  T
Q  409 aaagtaaattgttttttatatataggaccggagg 442  Q
    ||| | || ||||| || || |||||||||||||    
T  11932081 aaaattaaatgtttcttttaaataggaccggagg 11932114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 12094251 - 12094300
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||||||| ||| ||||||||||||| ||| |||| ||||||||    
T  12094251 ctatttataagaaacaatcaactttttagatttattaaatagttgatgta 12094300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 13391544 - 13391589
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| |||| | ||||||||||||||||||||||| |||||||    
T  13391544 ttataagtaaaagtcaactttttagattcattcaataaatgatgta 13391589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 13654635 - 13654590
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| ||||||| |||||||| ||||||||||||| |||||||    
T  13654635 ttataagcaaaaattcactttttaaattcattcaataaatgatgta 13654590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 445
Target Start/End: Complemental strand, 73833 - 73785
Alignment:
Q  397 caatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| ||||||| ||||||||||||||   ||||||||||||||    
T  73833 caatgaatctaaaaagtcaattgttttttataataaggaccggagggag 73785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 6499995 - 6500043
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||| |||| || ||||||||| ||| |||||||||||||    
T  6499995 tatttataagaaacaattgacattttagatttattaaataattgatgta 6500043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 11142497 - 11142449
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||||| |||| | ||||| |||||||| |||||||||||||    
T  11142497 tatttataagaaacaattcatttttttgattcattgaataattgatgta 11142449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 12646630 - 12646586
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||| ||||||| |||||||||||||||| ||||| |||||||    
T  12646630 tataagcaaaaatttactttttagattcatttaataaatgatgta 12646586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 14723410 - 14723478
Alignment:
Q  323 aaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacatta 390  Q
    ||||||||||||||||| ||||||| | |||||||| || |||  |||||| ||||| |||||||||||    
T  14723410 aaaaaattaactttttaaattcattgagtaattgatatatctaatctagaatatagaccaaatacatta 14723478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 21090388 - 21090520
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| |||||||||||||||||| |||| ||||||  ||||| |||| | ||||  || | |||||||||  | |||| |||| ||  |||    
T  21090388 cctatttacaagagaaaattaactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacatacattatttaatgtatttaaa 21090487  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| |||| || |||| | ||||||    
T  21090488 aagtaaattgtcttttttaaatagaatcggagg 21090520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 445
Target Start/End: Original strand, 30132887 - 30132935
Alignment:
Q  397 caatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||||||||| |||||||| |||||   ||||||||||||||    
T  30132887 caatgaatcaaaaaagttaattgtttcttataataaggaccggagggag 30132935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 445
Target Start/End: Complemental strand, 34297295 - 34297175
Alignment:
Q  326 aaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttt 424  Q
    ||||| |||||||||||||||| | ||||||||||  || | ||| || ||||||||| ||||| |  ||| |||||||| |||||||| || | ||| |    
T  34297295 aaattgactttttagattcattaagtaattgatgtgtcttgtctaaaatatagatcaattacatcatttatgcaatgaattaaaaaagtcaaatatttct 34297196  T
Q  425 tatatataggaccggagggag 445  Q
    |||| ||| ||||||| ||||    
T  34297195 tataaataagaccggatggag 34297175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 444
Target Start/End: Complemental strand, 41046962 - 41046830
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaat-agatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||| ||| || | ||||||||| |||| ||||||  ||||| |||| | |||| | | | ||||||||| || |||| |||| ||| |||||    
T  41046962 tatttataagagaaagttgattttttagatacattgaataatatatgtatctagtcaagaacttaaaccaaatacataaattatttaatgtatctaaaaa 41046863  T
Q  412 gtaaattgttttttatatataggaccggaggga 444  Q
    ||| ||||| | || || |||||||||||||||    
T  41046862 gtagattgtctcttgtaaataggaccggaggga 41046830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 4e-51; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 312 - 442
Target Start/End: Complemental strand, 29457974 - 29457844
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||    
T  29457974 ctatttataagaaaaagttaactttttagattcattcaatgattgatgtacctagtctagaaatagaccaaatacatcaactattcaatgaatcaaaaaa 29457875  T
Q  412 gtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| ||||||||||||| |||||    
T  29457874 gtaaattgtttcttatatataggactggagg 29457844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 313 - 441
Target Start/End: Original strand, 33371875 - 33372003
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaag 412  Q
    ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||     
T  33371875 tatttataagaaaaagttaattttttaaatttattcaataattgatgtacctagcctaaaaatagaccaaatacatcaactattcaatgaatcaaaaaaa 33371974  T
Q  413 taaattgttttttatatataggaccggag 441  Q
    |||||| ||| ||||||||||||||||||    
T  33371975 taaattatttcttatatataggaccggag 33372003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 49885392 - 49885525
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| || ||| || | ||||||||||    
T  49885392 ctatttataagaaaaaattaattttttagattcattcaataattgatgtatctagtctagaaatagaccaaatacatcaattatccacttaatcaaaaaa 49885491  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| |||||||||| | |||||||||    
T  49885492 gtaaattgtttcttatatatagtatcggagggag 49885525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 323 - 437
Target Start/End: Complemental strand, 54087521 - 54087407
Alignment:
Q  323 aaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttt 422  Q
    ||||| ||||| ||||| ||||||||||||||| ||||||||| | ||||||||||  |||||||| |||||||||||||||||||||||||||||||||    
T  54087521 aaaaagttaacattttaaattcattcaataattaatgtacctaacgtagaaatagacaaaatacatcaactattcaatgaatcaaaaaagtaaattgttt 54087422  T
Q  423 tttatatataggacc 437  Q
     ||||||||| ||||    
T  54087421 cttatatataagacc 54087407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 311 - 395
Target Start/End: Complemental strand, 5177901 - 5177817
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactat 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| ||||||    
T  5177901 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctaacttagaaatagaccaaatacatcaactat 5177817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 28406603 - 28406468
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||||| |||| ||||||||| |||||| ||||||| |||||||  | |||||| ||||| |||||||||||| ||||||| ||||| |||    
T  28406603 cctatttacaagaaacaattgactttttaggttcattgaataatttatgtacccggtctagaatatagaccaaatacattaattattcaacgaatctaaa 28406504  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| |||||||| || || ||||||||||||||||    
T  28406503 aagtcaattgtttcttgtaaataggaccggagggag 28406468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 54537455 - 54537590
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| || |||||| ||||||||| | ||||||||||| |||| |||||| ||||||||||||||  |  ||| |||||||||||||    
T  54537455 cctatttataagaaaaatttgacttttaagattcattgagtaattgatgtatctagtctagaatatagatcaaatacacaatttatgcaatgaatcaaaa 54537554  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| |||  ||| ||||| ||||||||| ||||||    
T  54537555 aagtcaataatttcttataaataggaccgaagggag 54537590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 53442043 - 53441908
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| || |||||||| ||||||| ||||||| |||||| | |  |||||  || | ||||||||| |  ||| |||||||||||||    
T  53442043 cctatttataagaaaaagttgactttttaaattcattgaataattaatgtacttggtatagaatgtataccaaatacatcatttatgcaatgaatcaaaa 53441944  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||| ||||| ||||| ||||||||||||||||    
T  53441943 aagtaaaatgtttcttataaataggaccggagggag 53441908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 318 - 445
Target Start/End: Original strand, 48593161 - 48593289
Alignment:
Q  318 ataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaagtaaa 416  Q
    |||||||| || | ||||||||||| |||| ||||||||||||| |  | |||||| ||||| ||||||||| || ||||||||||||| ||||| | |     
T  48593161 ataagaaacaagtgactttttagatacattgaataattgatgtatcgggtctagaatatagaccaaatacataaattattcaatgaatctaaaaaattac 48593260  T
Q  417 ttgttttttatatataggaccggagggag 445  Q
    |||||| || |||||||||||||||||||    
T  48593261 ttgtttcttgtatataggaccggagggag 48593289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 21662898 - 21663033
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctaga-aatagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| || |||||||||||||||| | ||||| |||||| | |  ||||  ||||| ||||||||| |  ||| |||||||||||||    
T  21662898 cctatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtatagattatagaccaaatacatcatttatgcaatgaatcaaaa 21662997  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || ||||| ||||| ||| ||||||||||||    
T  21662998 aagttaaatgtttcttataaataagaccggagggag 21663033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 315 - 445
Target Start/End: Complemental strand, 12065041 - 12064910
Alignment:
Q  315 tttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaagt 413  Q
    |||||||||||||||| |||||||| ||||||| | ||||| || ||  |||  ||||| ||||| ||||||||| |   || |||||||||||||||||    
T  12065041 tttataagaaaaaattgactttttaaattcattaagtaattaatatatttagtatagaatatagaccaaatacatcattaatgcaatgaatcaaaaaagt 12064942  T
Q  414 aaattgttttttatatataggaccggagggag 445  Q
    ||| ||||| |||||  |||||||||||||||    
T  12064941 aaaatgtttcttataagtaggaccggagggag 12064910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 51516970 - 51517104
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| || |||||||||||| ||  | ||||| |||||| | || ||||| ||||| ||||||||| |  ||| ||||||| |||||    
T  51516970 cctatttataagaaaaagttgactttttagatt-atggagtaattaatgtacttggcatagaatatagaccaaatacatcatttatgcaatgaaccaaaa 51517068  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || ||||| ||||| ||||||||||||||||    
T  51517069 aagtcaaatgtttcttataaataggaccggagggag 51517104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 445
Target Start/End: Original strand, 52864965 - 52865098
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||| ||||||| ||||||||||||||||||| | ||||||||||| ||   ||| || |||||  ||||| || |  ||| |||||||||||||||    
T  52864965 tatttatgagaaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagactaaatatatcatttatgcaatgaatcaaaaaa 52865064  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    || |||| ||||||||| ||||  ||||||||||    
T  52865065 gtcaattattttttataaatagcgccggagggag 52865098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 329 - 445
Target Start/End: Original strand, 8266263 - 8266378
Alignment:
Q  329 ttaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttata 428  Q
    ||||||||||||||||||| | |||||||||||  |   ||| ||||| | |||| ||||||  ||| ||||||||||||||||| || ||||| |||||    
T  8266263 ttaactttttagattcattgagtaattgatgtattttatcta-aaatataccaaacacattatttatacaatgaatcaaaaaagtcaaatgtttcttata 8266361  T
Q  429 tataggaccggagggag 445  Q
     ||||||||||||||||    
T  8266362 aataggaccggagggag 8266378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 445
Target Start/End: Original strand, 42225577 - 42225709
Alignment:
Q  314 atttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaaaag 412  Q
    ||||| ||||||||||||| ||||||||| |||| ||||||  ||||| |||| | | ||  || |  |||||||| || |||| |||| ||||||||||    
T  42225577 atttacaagaaaaaattaattttttagatacattgaataatgtatgtatctagtcaataacctaaactaaatacataaattatttaatgtatcaaaaaag 42225676  T
Q  413 taaattgttttttatatataggaccggagggag 445  Q
    ||||||||||||| || ||| ||||||||||||    
T  42225677 taaattgttttttgtaaataagaccggagggag 42225709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 441
Target Start/End: Original strand, 335387 - 335518
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| || ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  335387 cctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 335486  T
Q  410 aagtaaattgttttttatatataggaccggag 441  Q
    |||||||||||||||| || ||||||||||||    
T  335487 aagtaaattgttttttgtaaataggaccggag 335518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 19202262 - 19202397
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| || ||||||||||| |||| |||||   ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  19202262 cctatttacaagagaaagttgactttttagatacattgaataaggtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 19202361  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||||||||||||||| || ||||||||||||||||    
T  19202362 aagtaaattgttttttgtaaataggaccggagggag 19202397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 45010886 - 45010751
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||| |||||||| |||||||||| ||| ||||||||||||| ||||  ||||| ||||| || | |||| |  ||| |||| ||||||||    
T  45010886 cctatttataagagaaaattaattttttagatttattgaataattgatgtatctagtttagaatatagaccacaaacatcatttatacaataaatcaaaa 45010787  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || | ||| ||||| |||||||  |||||||    
T  45010786 aagtcaaatatttcttataaataggactagagggag 45010751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 442
Target Start/End: Complemental strand, 10049804 - 10049672
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| | |||| ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || ||||||||| ||| |||    
T  10049804 cctatttacaagagacaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaa 10049705  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| | || || |||||||||||||    
T  10049704 aagtaaattgtctcttgtaaataggaccggagg 10049672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 9465083 - 9465218
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| || ||||||||||| |||| ||||||  ||||| |||| | ||||  || ||||||||||| || ||||  ||| ||| |||    
T  9465083 cctatttacaagataaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaattattttatgtatctaaa 9465182  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| | || || ||||||||||||||||    
T  9465183 aagtaaattgtctcttgtaaataggaccggagggag 9465218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 29019871 - 29019736
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| |||||| ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  29019871 cctatttacaagagaaaattgactttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 29019772  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    | ||||||||| | || || ||||||||||||||||    
T  29019771 atgtaaattgtctcttgtaaataggaccggagggag 29019736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 40214912 - 40215047
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| || ||||||||||| ||||  |||||  ||||| |||| | ||||  || ||||||||||| || |||| |||| ||| |||    
T  40214912 cctatttacaagagaaagttgactttttagatacattggataatgtatgtatctagtcaagaatctaaatcaaatacataaattatttaatgtatctaaa 40215011  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||||| |||| | ||||| ||||||||||||||||    
T  40215012 aagtaacttgtctcttataaataggaccggagggag 40215047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 442
Target Start/End: Original strand, 8243696 - 8243826
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||| |||| | |||| ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || ||||||||| ||| |||||    
T  8243696 tatttacaagagacaattgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattattcaatgtatctaaaaa 8243795  T
Q  412 gtaaattgttttttatatataggaccggagg 442  Q
    ||||||||| | || || |||||||||||||    
T  8243796 gtaaattgtctcttgtaaataggaccggagg 8243826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 347
Target Start/End: Original strand, 40460359 - 40460393
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcatt 347  Q
    |||||||||||||||||||||||||||||||||||    
T  40460359 tatttataagaaaaaattaactttttagattcatt 40460393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 1086635 - 1086590
Alignment:
Q  317 tataagaaaaaattaactttttagattcattcaataattgatgtac 362  Q
    |||||| ||||||| |||||||||||||||||||||| ||||||||    
T  1086635 tataagtaaaaattcactttttagattcattcaataaatgatgtac 1086590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 445
Target Start/End: Complemental strand, 21663020 - 21662887
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||||| | |||||||||| ||||||||  |||| |||||||  | | ||| ||  || | ||| |||||||| || |||||||||| |||||    
T  21663020 tatttataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctataatctataccaagtacattaattactcaatgaatctaaaaa 21662921  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    || || | ||| ||||| ||||||||||||||||    
T  21662920 gtcaactttttcttataaataggaccggagggag 21662887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 6086913 - 6087045
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| | | || ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || ||||||||| ||| |||    
T  6086913 cctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatctaaa 6087012  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| | || || |||||||||||||    
T  6087013 aagtaaattgtctcttgtaaataggaccggagg 6087045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 9440140 - 9440272
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaat-agatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| | | || ||||||||||| |||| ||||||  ||||| |||| | |||| | | | ||||||||| || ||||||||| ||| |||    
T  9440140 cctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacttaaaccaaatacataaattattcaatgtatctaaa 9440239  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| | || || |||||||||||||    
T  9440240 aagtaaattgtctcttgtaaataggaccggagg 9440272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 14768234 - 14768099
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| || | ||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  14768234 cctatttacaagagaaagttgattttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 14768135  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| | || || ||||||||||||||||    
T  14768134 aagtaaattgtctcttgtaaataggaccggagggag 14768099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 25113361 - 25113496
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||| ||| || ||||||||||| |||| ||||||  |||||  ||  | ||||  || | ||||||||| || |||| |||| ||| |||    
T  25113361 cctatttataagagaaagttgactttttagatacattgaataatgtatgtatttaatcaagaacctaaaccaaatacataaattatttaatgtatcgaaa 25113460  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| | || || ||||||||||||||||    
T  25113461 aagtaaattgtctcttgtaaataggaccggagggag 25113496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 28945792 - 28945657
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| |||||| |||||||||||  ||||||||||  ||||  ||||   ||||  || | ||||||||| || |||| |||| ||| |||    
T  28945792 cctatttacaagagaaaattgactttttagatatattcaataatgtatgtttctagttaagaacctaaaccaaatacataaattatttaatgtatctaaa 28945693  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| | || || ||||||||||||||||    
T  28945692 aagtaaattgtctcttgtaaataggaccggagggag 28945657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 413
Target Start/End: Original strand, 44518048 - 44518151
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||  || |||||||||||||||| | ||||| ||||| || | ||| || ||||| ||||||||| |  ||  |||||||||||||    
T  44518048 cctatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgtctaaaatatagaccaaatacatcatttagacaatgaatcaaaa 44518147  T
Q  410 aagt 413  Q
    ||||    
T  44518148 aagt 44518151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 49123080 - 49122945
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||||| || ||| || ||||||||||| |||| ||||||  ||||| |||| | |||   || | ||||||||| || |||| |||| ||| |||    
T  49123080 cctatttataggataaatttgactttttagatacattgaataatgtatgtatctagtcaagagcctaaaccaaatacataaattatttaatgtatctaaa 49122981  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| | || || ||||||||||||||||    
T  49122980 aagtaaattgtctcttgtaaataggaccggagggag 49122945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 12747833 - 12747783
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||||||||||||| | |||||||||||||  | |||||||||||    
T  12747833 cctatttataagaaaaaattgattttttagattcatcgagtaattgatgta 12747783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 361
Target Start/End: Original strand, 29290794 - 29290840
Alignment:
Q  315 tttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||||||||| |||||||||||||||| || || |||||||    
T  29290794 tttataagaaaaaattcactttttagattcattgaacaactgatgta 29290840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 413
Target Start/End: Complemental strand, 32711317 - 32711235
Alignment:
Q  332 actttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaagt 413  Q
    |||||||||||||||| ||||||||||||| || | ||| || ||||  ||||||||| || ||||||||||| | |||||||    
T  32711317 actttttagattcattgaataattgatgtatctggtctataatataggccaaatacatcaattattcaatgaacctaaaaagt 32711235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 53703793 - 53703731
Alignment:
Q  383 atacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| ||||| ||||| ||||||||| |||||||| |||||   ||||||||||||||    
T  53703793 atacattaattattctatgaaccaaaaaagtcaattgtttcttataataaggaccggagggag 53703731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 331925 - 331880
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| |||||||||| ||||||||||||||| ||| |||||||    
T  331925 ttataagcaaaaattaacattttagattcattcattaaatgatgta 331880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 445
Target Start/End: Original strand, 18765340 - 18765405
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| || |||| |||| ||| |||||||||||||||| || || ||||||||||| ||||    
T  18765340 caaatacataaattatttaatgcatctaaaaagtaaattgtttcttgtaaataggaccggaaggag 18765405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 445
Target Start/End: Original strand, 28406553 - 28406614
Alignment:
Q  384 tacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||| || ||||||||||| | ||||||| |||||||| || || ||||||||||||||||    
T  28406553 tacataaattattcaatgaacctaaaaagtcaattgtttcttgtaaataggaccggagggag 28406614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 29241607 - 29241562
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||  ||||| ||||||||||||||||||||||| |||||||    
T  29241607 ttataagccaaaatcaactttttagattcattcaataaatgatgta 29241562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 422
Target Start/End: Original strand, 48643687 - 48643728
Alignment:
Q  381 aaatacattaactattcaatgaatcaaaaaagtaaattgttt 422  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||    
T  48643687 aaatacattaattattcaatgaatctaaaaagtcaattgttt 48643728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 52168497 - 52168452
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||| |||||| |||||| ||||||||||||||| |||||||    
T  52168497 ttataagagaaaatttacttttaagattcattcaataaatgatgta 52168452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 445
Target Start/End: Original strand, 53441993 - 53442054
Alignment:
Q  384 tacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    |||||||| ||||||||||||  ||||||| || | ||| ||||| ||||||||||||||||    
T  53441993 tacattaattattcaatgaatttaaaaagtcaactttttcttataaataggaccggagggag 53442054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 442
Target Start/End: Complemental strand, 26999157 - 26999025
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| | | || ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  26999157 cctatttacaagagacatttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 26999058  T
Q  410 aagtaaattgttttttatatataggaccggagg 442  Q
    ||||||||||| | || || |||||||||||||    
T  26999057 aagtaaattgtctcttgtaaataggaccggagg 26999025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 413
Target Start/End: Original strand, 32711221 - 32711317
Alignment:
Q  318 ataagaaaaaattaactttttagattcattcaataattgatgtacctagcctaga-aatagatcaaatacattaactattcaatgaatcaaaaaagt 413  Q
    ||||| ||||| | ||||||||| |||||| |||||||||||||  | ||||| |  ||||| || |||||| || ||||||||||||| |||||||    
T  32711221 ataagcaaaaagtcactttttaggttcattgaataattgatgtatttggcctatattatagaccagatacatcaattattcaatgaatctaaaaagt 32711317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 3e-46; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 2810091 - 2810225
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||| |||||    
T  2810091 cctatttataaaaaaaagttaattttttagattcattcaataattgatgtacctagtctagaaatagtccaaatacatcaactattcaatgaatgaaaaa 2810190  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||||| ||| ||||||||||||||||||||||    
T  2810191 agtaaattatttcttatatataggaccggagggag 2810225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 311 - 428
Target Start/End: Complemental strand, 1837095 - 1836978
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||| || |||||||| |||||||||    
T  1837095 cctatttataagaaaaagttaattttttagatttattcaataattgatgtacctagcctagaaatagaccaaatacatcaattattcaattaatcaaaaa 1836996  T
Q  411 agtaaattgttttttata 428  Q
    |||||||||||| |||||    
T  1836995 agtaaattgtttcttata 1836978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 311 - 441
Target Start/End: Complemental strand, 8646814 - 8646684
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    ||||||||||||||||| ||| ||||||||||| ||| ||||||||||||||||| | |||||||||| ||||| ||| |||||||||||||||||||||    
T  8646814 cctatttataagaaaaagttatctttttagatttatttaataattgatgtacctaacttagaaatagaccaaatgcatcaactattcaatgaatcaaaaa 8646715  T
Q  411 agtaaattgttttttatatataggaccggag 441  Q
    |||||||| ||| |||||||||| |||||||    
T  8646714 agtaaattatttcttatatatagaaccggag 8646684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 371 - 445
Target Start/End: Original strand, 2943315 - 2943389
Alignment:
Q  371 gaaatagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2943315 gaaatagaccaaatacatcaactatttaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggag 2943389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 3064896 - 3065030
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaa 410  Q
    |||||||||||||||||||| |||||||||||||||  |||||| ||||| || |  || || ||||| ||||||||  |  ||| ||||||||||||||    
T  3064896 ctatttataagaaaaaattatctttttagattcattgtataattaatgtatcttgtataaaatatagaccaaatacaccatttatgcaatgaatcaaaaa 3064995  T
Q  411 agtaaattgttttttatatataggaccggagggag 445  Q
    |||||| | ||| ||||| ||||||||||||||||    
T  3064996 agtaaaatatttcttataaataggaccggagggag 3065030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 24949643 - 24949778
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| |||||| ||||||||||| |||| ||||||  ||||| |||| | |||| ||| | ||||||||| || |||| |||| ||| |||    
T  24949643 cctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaattatttaatgtatctaaa 24949742  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| | || || ||||||||||||||||    
T  24949743 aagtaaattgtctcttgtaaataggaccggagggag 24949778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 28630765 - 28630891
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||| || |||||||  ||||||| | ||||||||||| || | ||| || ||||| ||||||||| |  ||| ||||||||| |||    
T  28630765 cctatttataagaaaaatttgactttttttattcattgagtaattgatgtatcttgtctataatatagaccaaatacataatttatgcaatgaatctaaa 28630864  T
Q  410 aagtaaattgttttttatatataggac 436  Q
    |||| |||||||| ||||| |||||||    
T  28630865 aagtcaattgtttcttataaataggac 28630891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 413
Target Start/End: Complemental strand, 1158381 - 1158278
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||||| |||| |||||||| || |||| |||||||||||||  | | |||||| ||||| | |||||||||| ||||||||||||| |||    
T  1158381 cctatttacaagaaataattgactttttaaatacattgaataattgatgtatttggtctagaatatagaccgaatacattaattattcaatgaatctaaa 1158282  T
Q  410 aagt 413  Q
    ||||    
T  1158281 aagt 1158278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 445
Target Start/End: Complemental strand, 33120037 - 33119905
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||||||||||||  || |||||||||||||||| |||||| |||||| || | | | | ||||| ||||||||  |  ||| |||||||||||| ||    
T  33120037 ctatttataagaaaattttgactttttagattcattgaataatcgatgtatcttgtc-aaatatagaccaaatacaacatttatacaatgaatcaaagaa 33119939  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    || || ||||| ||||| ||||||||| ||||||    
T  33119938 gtcaaatgtttcttataaataggaccgaagggag 33119905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 445
Target Start/End: Original strand, 27909002 - 27909122
Alignment:
Q  327 aattaactttttagattca-ttcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttt 424  Q
    |||| |||||||||||||| || | ||||||||||| |  | ||| || ||||||||||||||| || |||||||||||| |||||||| || ||||| |    
T  27909002 aattgactttttagattcaattgagtaattgatgtatccggtctaaaatatagatcaaatacatcaattattcaatgaattaaaaaagtcaaatgtttct 27909101  T
Q  425 tatatataggaccggagggag 445  Q
    | || |||||||| |||||||    
T  27909102 tgtaaataggaccagagggag 27909122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 6045693 - 6045828
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||| ||| || || |||||||| |||| ||||||  ||||| |||| | ||||  || ||||||||||| || |||| |||  ||| |||    
T  6045693 cctatttataagagaaagttgaccttttagatacattgaataatctatgtatctagtcaagaatctaaatcaaatacataaattatttaatctatctaaa 6045792  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| | || || ||||||||||||||||    
T  6045793 aagtaaattgtctcttgtaaataggaccggagggag 6045828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 33859626 - 33859491
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| |||||||||||||| |||  ||||||  ||||| |||| | ||||| || | ||||||||| || |||| |||| ||| |||    
T  33859626 cctatttacaagagaaagttaactttttagatacatcgaataatgtatgtatctagtcaagaaactaaaccaaatacataaattatttaatgtatctaaa 33859527  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| | || || ||||||||| ||||||    
T  33859526 aagtaaattgtctattgtaaataggaccgaagggag 33859491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 445
Target Start/End: Complemental strand, 7405578 - 7405445
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||| |||| |||||| ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||||    
T  7405578 tatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 7405479  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| | || || ||||||||| ||||||    
T  7405478 gtaaattgtctcttgtaaataggaccgaagggag 7405445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 445
Target Start/End: Complemental strand, 17265855 - 17265722
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||||||| || | |||||| ||||||  | ||||||||||| || | |||||| |||||  |||||| | |  ||| |||||||||||||||    
T  17265855 tatttataagaaaaatttgattttttaaattcatcgagtaattgatgtatcttgtctagaatatagactaaatacgtcatttatgcaatgaatcaaaaaa 17265756  T
Q  412 gtaaattgttttttatatataggaccggagggag 445  Q
    || || ||||| ||||| |||||| |||| ||||    
T  17265755 gtcaaatgtttcttataaataggatcggaaggag 17265722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 314 - 445
Target Start/End: Original strand, 390820 - 390952
Alignment:
Q  314 atttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaaaag 412  Q
    |||||||||| ||| || | ||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| ||||||    
T  390820 atttataagataaagttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaag 390919  T
Q  413 taaattgttttttatatataggaccggagggag 445  Q
    |||||||| | || || ||||||||||||||||    
T  390920 taaattgtctcttgtaaataggaccggagggag 390952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 7649813 - 7649861
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||| ||| ||||| ||||||||||||||| |||||||||||||    
T  7649813 tatttataataaataattatctttttagattcattgaataattgatgta 7649861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 413
Target Start/End: Complemental strand, 2230485 - 2230382
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||||||  || |||||||||||||||| | ||||| ||||| || | |||||| ||||| ||| ||||| |  ||||||| ||||||| |    
T  2230485 cctatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgtctagaatatagaccaagtacatcatttattcaacgaatcaata 2230386  T
Q  410 aagt 413  Q
    ||||    
T  2230385 aagt 2230382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 6047808 - 6047943
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| || | ||| |||||||||||||| |||| ||||||  ||||| |||| | ||||  || ||||||||||| || |||| |||| ||| |||    
T  6047808 cctatttacaacagaaagttaactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaattatttaatgtatctaaa 6047907  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| | | || || ||| ||||||||||||    
T  6047908 aagtaaattatctcttgtaaatatgaccggagggag 6047943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 438
Target Start/End: Original strand, 30627837 - 30627963
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||||||| || | |||||| ||| ||| | ||||||||||| || | ||| || ||||| ||||||||| |  ||| |||||||||| ||||    
T  30627837 tatttataagaaaaatttgattttttatatttattgagtaattgatgtatcttgtctaaaatatagaccaaatacatcatttatgcaatgaatcagaaaa 30627936  T
Q  412 gtaaattgttttttatatataggaccg 438  Q
    || || ||||| ||||| |||| ||||    
T  30627937 gtcaaatgtttcttataaatagaaccg 30627963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 435
Target Start/End: Original strand, 7257410 - 7257467
Alignment:
Q  378 atcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatatagga 435  Q
    |||||||||||||| ||||||||||||  ||||||| |||| | ||||||| ||||||    
T  7257410 atcaaatacattaattattcaatgaatttaaaaagtcaattttattttataaatagga 7257467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 10258431 - 10258386
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| ||||| |||||||||||||||||||||| | |||||||    
T  10258431 ttataagtaaaaaataactttttagattcattcaattaatgatgta 10258386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 16121092 - 16121047
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| |||||| ||||||||||||||||| ||||| |||||||    
T  16121092 ttataagcaaaaatcaactttttagattcattaaataaatgatgta 16121047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 26527317 - 26527272
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||| |||||||||| ||||||||||||||| ||| |||||||    
T  26527317 ttataagcaaaaattaacattttagattcattcattaaatgatgta 26527272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 353
Target Start/End: Complemental strand, 32124251 - 32124214
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataa 353  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  32124251 ttataagcaaaaattgactttttagattcattcaataa 32124214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 347
Target Start/End: Original strand, 2937092 - 2937128
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcatt 347  Q
    ||||||||||||||| | |||||||||||||||||||    
T  2937092 cctatttataagaaacatttaactttttagattcatt 2937128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 436
Target Start/End: Original strand, 6801581 - 6801689
Alignment:
Q  329 ttaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttat 427  Q
    |||||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||||||||||||||| || |    
T  6801581 ttaactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacatgaattatttaatgtatctaaaaagtaaattgtttcttgt 6801680  T
Q  428 atataggac 436  Q
    | |||||||    
T  6801681 aaataggac 6801689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 440
Target Start/End: Complemental strand, 14931324 - 14931264
Alignment:
Q  380 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccgga 440  Q
    ||||||||| || |||| |||| ||| |||||||||||||| | ||||| |||||||||||    
T  14931324 caaatacataaattatttaatgtatctaaaaagtaaattgtctcttataaataggaccgga 14931264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 418
Target Start/End: Original strand, 20703476 - 20703520
Alignment:
Q  374 atagatcaaatacattaactattcaatgaatcaaaaaagtaaatt 418  Q
    ||||| |||||||||||| ||||||||||| |||||| |||||||    
T  20703476 atagaccaaatacattaaatattcaatgaaccaaaaatgtaaatt 20703520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 347
Target Start/End: Complemental strand, 28630889 - 28630853
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcatt 347  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  28630889 cctatttataagaaacaattgactttttagattcatt 28630853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 34639052 - 34639180
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| | | || ||||||||||| ||| |||||||  ||||| |||| | ||||  || | ||||||||| || | ||||||| ||| |||    
T  34639052 cctatttacaagagacagttgactttttagatacatgcaataatgtatgtatctagtcaagaacctaaaccaaatacataaatttttcaatgtatctaaa 34639151  T
Q  410 aagtaaattgttttttatatataggaccg 438  Q
    ||||||||||| | ||||| |||||||||    
T  34639152 aagtaaattgtctcttataaataggaccg 34639180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 16519 - 16654
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacattaactattcaatgaatc-aaaa 409  Q
    |||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||    
T  16519 cctatttacaagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaa 16618  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    || |||||||||| ||||||| | ||||||||||||    
T  16619 aattaaattgtttattatatacacgaccggagggag 16654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 442
Target Start/End: Complemental strand, 1666 - 1537
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctaga-aatagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||  ||| |||||  ||||||||||| ||| |  ||| ||| |||||||||||    
T  1666 tatttataagaaaaaattaattttttagattcattgaataattgatgta-ttagtctagagtatagatcaaatgcatcatttatgcaacgaatcaaaaaa 1568  T
Q  412 gtaaattgttttttatatataggaccggagg 442  Q
    || || |||||| |||| |||||||||||||    
T  1567 gtcaaatgttttatataaataggaccggagg 1537  T

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Target: scaffold0024 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 7198 - 7271
Alignment:
Q  372 aaatagatcaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||| |||| ||||    
T  7198 aaatagaccaaatacatcaactatttaatgaatcaaaaaagtaaattgtttcttatatataggatcggatggag 7271  T

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Target: scaffold0024; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 36090 - 35955
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| |||||| ||||||||||| |||||||||||  ||||| ||||   ||||  || |  |||||||| || |||| |||| ||| |||    
T  36090 cctatttacaagagaaaattgactttttagatgcattcaataatgcatgtatctagttaagaacctaaacaaaatacataaattatttaatgtatctaaa 35991  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||| | || || ||||||||||||||||    
T  35990 aagtaaattgtctcttgtaaataggaccggagggag 35955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 438
Target Start/End: Original strand, 16543 - 16669
Alignment:
Q  313 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaaaa 411  Q
    ||||||||||||||| ||||||||||  ||||||| | ||||||||| | || | |||||| ||||| |||||||||||  ||| |||||||||||||||    
T  16543 tatttataagaaaaatttaacttttttaattcattgagtaattgatgcatcttgactagaatatagaccaaatacattatttatacaatgaatcaaaaaa 16642  T
Q  412 gtaaattgttttttatatataggaccg 438  Q
    || ||  |||| ||||| ||| |||||    
T  16643 gtcaaacgtttcttataaataagaccg 16669  T

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Target: scaffold0123 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 29380 - 29245
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||| |||| ||| || ||||||||||| |||| ||||||  ||||| |||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  29380 cctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 29281  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||||| || || ||||||||||||||||    
T  29280 aagtaaattgtttcttgtaaataggaccggagggag 29245  T

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Target: scaffold0767 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 445
Target Start/End: Complemental strand, 3869 - 3810
Alignment:
Q  386 cattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    |||||| ||||||||||||||||||||| |||||||| |||||   ||||||||||||||    
T  3869 cattaagtattcaatgaatcaaaaaagtcaattgtttcttataataaggaccggagggag 3810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 445
Target Start/End: Complemental strand, 156904 - 156769
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacattaactattcaatgaatcaaaa 409  Q
    |||||||||||||||||||  | ||||||| |||||| | ||||| |||||| | |  ||||| ||||| |||||| ||    ||| |||||||| ||||    
T  156904 cctatttataagaaaaaatagattttttagtttcattgagtaattaatgtacttggtatagaatatagaccaaatatatcgtttatgcaatgaattaaaa 156805  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    |||| || ||||| ||||| ||||||||||||||||    
T  156804 aagttaaatgtttcttataaataggaccggagggag 156769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 445
Target Start/End: Original strand, 492317 - 492452
Alignment:
Q  311 cctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaa-tagatcaaatacattaactattcaatgaatcaaaa 409  Q
    ||||||||||||| ||| || | ||||||||| |||| ||||||  |||||  ||| | ||||  || | ||||||||| || |||| |||| ||| |||    
T  492317 cctatttataagagaaagttgattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 492416  T
Q  410 aagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||||||| || || ||||||| ||||||||    
T  492417 aagtaaattgtttcttgtaaataggactggagggag 492452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 112908 - 112970
Alignment:
Q  383 atacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagggag 445  Q
    ||||||||| |||||||| |||| ||||||| |||||||| |||| |  ||||||||||||||    
T  112908 atacattaattattcaataaatctaaaaagtcaattgtttcttatgttaaggaccggagggag 112970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 40158 - 40207
Alignment:
Q  312 ctatttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    ||||||||||| ||||||||||| ||||||||||||   |||||||||||    
T  40158 ctatttataaggaaaaattaactctttagattcattatgtaattgatgta 40207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 5545 - 5500
Alignment:
Q  316 ttataagaaaaaattaactttttagattcattcaataattgatgta 361  Q
    |||||||||| |||| |||||||||||||||| ||||||| |||||    
T  5545 ttataagaaataattgactttttagattcattgaataattaatgta 5500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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