View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17639_high_16 (Length: 334)

Name: NF17639_high_16
Description: NF17639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17639_high_16
NF17639_high_16
[»] chr7 (46 HSPs)
chr7 (63-321)||(32432695-32432953)
chr7 (164-321)||(29173765-29173922)
chr7 (164-321)||(15612520-15612677)
chr7 (164-321)||(17842345-17842502)
chr7 (164-309)||(4583174-4583319)
chr7 (164-321)||(6546762-6546919)
chr7 (164-321)||(37110117-37110274)
chr7 (166-321)||(24211984-24212140)
chr7 (203-321)||(18797570-18797688)
chr7 (164-321)||(7335036-7335193)
chr7 (164-321)||(30055770-30055927)
chr7 (164-321)||(37703259-37703416)
chr7 (202-302)||(43925357-43925457)
chr7 (202-321)||(22687474-22687593)
chr7 (203-309)||(25691344-25691450)
chr7 (164-309)||(26587853-26587998)
chr7 (164-321)||(26980549-26980706)
chr7 (164-321)||(35353351-35353508)
chr7 (167-321)||(9355590-9355744)
chr7 (164-319)||(15672518-15672675)
chr7 (164-321)||(8861528-8861685)
chr7 (164-321)||(31520502-31520659)
chr7 (203-321)||(32820853-32820971)
chr7 (179-321)||(46480905-46481047)
chr7 (164-321)||(12390410-12390567)
chr7 (164-276)||(38258867-38258979)
chr7 (170-309)||(31578831-31578970)
chr7 (221-321)||(11071446-11071546)
chr7 (167-297)||(23111459-23111589)
chr7 (165-321)||(27283987-27284145)
chr7 (164-309)||(10358975-10359120)
chr7 (176-321)||(10481848-10481993)
chr7 (202-321)||(37347264-37347383)
chr7 (164-320)||(41764839-41764995)
chr7 (164-320)||(48928058-48928214)
chr7 (164-321)||(5657241-5657399)
chr7 (202-321)||(34361975-34362096)
chr7 (208-309)||(44411345-44411446)
chr7 (164-321)||(21991879-21992027)
chr7 (221-321)||(37704425-37704525)
chr7 (233-321)||(12165986-12166074)
chr7 (202-321)||(32593006-32593124)
chr7 (164-253)||(44598978-44599066)
chr7 (164-238)||(12166215-12166289)
chr7 (1-73)||(32435485-32435558)
chr7 (274-321)||(38053704-38053751)
[»] chr6 (15 HSPs)
chr6 (164-321)||(3879698-3879855)
chr6 (164-321)||(6090941-6091098)
chr6 (164-321)||(20768350-20768507)
chr6 (165-321)||(1946102-1946260)
chr6 (202-321)||(33892809-33892928)
chr6 (203-297)||(21016916-21017010)
chr6 (164-321)||(5627659-5627817)
chr6 (166-321)||(7054533-7054689)
chr6 (164-321)||(7234791-7234951)
chr6 (209-320)||(4318626-4318737)
chr6 (203-321)||(33619098-33619219)
chr6 (172-321)||(8513496-8513638)
chr6 (202-321)||(6089171-6089283)
chr6 (202-321)||(29182432-29182548)
chr6 (208-259)||(33724062-33724113)
[»] chr3 (52 HSPs)
chr3 (164-321)||(4015718-4015875)
chr3 (164-321)||(21193866-21194023)
chr3 (164-321)||(33378545-33378702)
chr3 (165-297)||(39282935-39283067)
chr3 (164-321)||(22622478-22622635)
chr3 (164-321)||(40552019-40552176)
chr3 (164-309)||(53228912-53229057)
chr3 (164-321)||(26941020-26941177)
chr3 (164-321)||(48355200-48355357)
chr3 (202-321)||(24707913-24708032)
chr3 (166-321)||(47481781-47481937)
chr3 (166-321)||(42505837-42505992)
chr3 (204-321)||(11357181-11357298)
chr3 (164-321)||(29099605-29099763)
chr3 (204-321)||(52040722-52040839)
chr3 (164-321)||(37157967-37158124)
chr3 (164-321)||(37203327-37203484)
chr3 (164-309)||(46297522-46297667)
chr3 (203-321)||(7327281-7327399)
chr3 (203-309)||(24488761-24488867)
chr3 (164-321)||(21009561-21009719)
chr3 (167-321)||(33698412-33698566)
chr3 (164-321)||(36012398-36012556)
chr3 (202-321)||(22451227-22451346)
chr3 (202-321)||(44186315-44186434)
chr3 (166-281)||(20373025-20373140)
chr3 (164-297)||(3362538-3362671)
chr3 (164-321)||(43975652-43975809)
chr3 (171-295)||(1089978-1090102)
chr3 (170-297)||(54506090-54506218)
chr3 (203-321)||(4761447-4761565)
chr3 (203-321)||(44891756-44891874)
chr3 (164-321)||(2008191-2008355)
chr3 (164-309)||(14586440-14586585)
chr3 (165-321)||(22445826-22445982)
chr3 (227-321)||(34133194-34133288)
chr3 (164-321)||(51212537-51212688)
chr3 (164-321)||(32373729-32373885)
chr3 (164-276)||(11356918-11357030)
chr3 (202-297)||(40936256-40936351)
chr3 (164-258)||(11467132-11467226)
chr3 (203-295)||(25580024-25580116)
chr3 (203-321)||(29164068-29164179)
chr3 (233-321)||(46994490-46994578)
chr3 (202-309)||(50475082-50475196)
chr3 (227-302)||(38591976-38592051)
chr3 (202-308)||(3654997-3655106)
chr3 (210-292)||(27480164-27480246)
chr3 (164-250)||(35844577-35844663)
chr3 (165-226)||(34133312-34133373)
chr3 (202-238)||(43348556-43348592)
chr3 (249-321)||(54828546-54828618)
[»] chr1 (52 HSPs)
chr1 (164-321)||(48353806-48353963)
chr1 (164-321)||(46931673-46931831)
chr1 (164-321)||(47279453-47279611)
chr1 (164-321)||(2960012-2960169)
chr1 (164-321)||(27532737-27532893)
chr1 (164-309)||(32216331-32216476)
chr1 (166-321)||(15168360-15168515)
chr1 (164-321)||(10922991-10923148)
chr1 (164-321)||(11742123-11742280)
chr1 (164-309)||(34012137-34012282)
chr1 (164-321)||(14758296-14758453)
chr1 (164-321)||(32267298-32267455)
chr1 (164-321)||(37451549-37451706)
chr1 (202-309)||(238306-238413)
chr1 (203-321)||(39393648-39393766)
chr1 (204-321)||(16415910-16416027)
chr1 (164-321)||(23999611-23999769)
chr1 (202-321)||(3309417-3309537)
chr1 (164-321)||(3535187-3535344)
chr1 (204-308)||(21289877-21289981)
chr1 (202-321)||(1547535-1547654)
chr1 (202-321)||(28769917-28770036)
chr1 (164-321)||(8222392-8222549)
chr1 (164-321)||(19899523-19899681)
chr1 (164-309)||(31962892-31963038)
chr1 (164-321)||(47682249-47682406)
chr1 (170-321)||(27763071-27763223)
chr1 (202-309)||(28564576-28564683)
chr1 (165-309)||(30254699-30254843)
chr1 (164-295)||(7078818-7078949)
chr1 (170-297)||(38823502-38823629)
chr1 (167-321)||(9902812-9902966)
chr1 (164-321)||(15383197-15383355)
chr1 (164-297)||(22170999-22171132)
chr1 (170-309)||(27563666-27563805)
chr1 (167-321)||(4330545-4330699)
chr1 (204-321)||(27227280-27227397)
chr1 (218-321)||(1359744-1359847)
chr1 (164-282)||(15752332-15752450)
chr1 (164-258)||(48620916-48621010)
chr1 (164-297)||(10181762-10181895)
chr1 (202-321)||(51129123-51129240)
chr1 (203-321)||(25160896-25161015)
chr1 (204-321)||(27266995-27267112)
chr1 (202-321)||(31621341-31621461)
chr1 (209-308)||(30326751-30326851)
chr1 (203-309)||(42721312-42721418)
chr1 (213-321)||(40885077-40885185)
chr1 (164-275)||(33725366-33725478)
chr1 (237-309)||(37618729-37618801)
chr1 (204-321)||(41926421-41926537)
chr1 (223-309)||(18422927-18423006)
[»] chr4 (49 HSPs)
chr4 (167-321)||(7703777-7703931)
chr4 (164-321)||(34361277-34361435)
chr4 (164-321)||(879334-879491)
chr4 (164-309)||(6864315-6864460)
chr4 (164-321)||(19440434-19440591)
chr4 (164-321)||(25184381-25184538)
chr4 (164-309)||(33816302-33816447)
chr4 (164-321)||(55240891-55241048)
chr4 (164-318)||(23431826-23431980)
chr4 (164-321)||(4205252-4205409)
chr4 (164-321)||(17272232-17272389)
chr4 (164-321)||(19089239-19089396)
chr4 (164-321)||(23761339-23761496)
chr4 (164-309)||(29583986-29584131)
chr4 (165-321)||(37775926-37776082)
chr4 (203-321)||(1815569-1815687)
chr4 (170-321)||(39400276-39400427)
chr4 (203-321)||(50764988-50765106)
chr4 (164-302)||(4598269-4598407)
chr4 (164-321)||(32912365-32912523)
chr4 (164-321)||(37287996-37288154)
chr4 (164-321)||(28002772-28002929)
chr4 (164-297)||(30002427-30002560)
chr4 (164-321)||(32579714-32579871)
chr4 (164-297)||(47254032-47254165)
chr4 (164-321)||(49376235-49376392)
chr4 (165-321)||(3042887-3043043)
chr4 (202-321)||(7152028-7152147)
chr4 (202-321)||(32592352-32592471)
chr4 (203-321)||(33341666-33341784)
chr4 (166-321)||(46887946-46888101)
chr4 (164-321)||(37663527-37663684)
chr4 (203-321)||(55477716-55477834)
chr4 (164-321)||(17173558-17173715)
chr4 (206-309)||(34947923-34948026)
chr4 (164-321)||(35020817-35020978)
chr4 (202-321)||(35025391-35025509)
chr4 (164-297)||(26896379-26896513)
chr4 (164-321)||(25700842-25700999)
chr4 (164-321)||(36493475-36493632)
chr4 (203-297)||(27396908-27397000)
chr4 (202-321)||(50697510-50697629)
chr4 (164-321)||(17167981-17168138)
chr4 (202-297)||(46883938-46884033)
chr4 (164-282)||(38012569-38012687)
chr4 (164-321)||(5047752-5047909)
chr4 (204-309)||(9139509-9139612)
chr4 (164-309)||(42200010-42200155)
chr4 (206-297)||(4934040-4934132)
[»] chr8 (42 HSPs)
chr8 (164-321)||(5299712-5299869)
chr8 (164-321)||(16446641-16446798)
chr8 (164-321)||(35859201-35859358)
chr8 (167-321)||(466099-466253)
chr8 (164-321)||(1149398-1149555)
chr8 (164-321)||(37970285-37970442)
chr8 (164-321)||(38644245-38644402)
chr8 (164-321)||(43643361-43643518)
chr8 (164-321)||(34895229-34895386)
chr8 (202-321)||(23854235-23854354)
chr8 (170-321)||(1953760-1953911)
chr8 (164-297)||(7890723-7890856)
chr8 (202-321)||(35459515-35459634)
chr8 (203-321)||(24823199-24823317)
chr8 (167-321)||(34951826-34951980)
chr8 (164-321)||(4132452-4132609)
chr8 (202-321)||(44869764-44869883)
chr8 (164-321)||(30654349-30654506)
chr8 (165-294)||(41362716-41362845)
chr8 (203-291)||(43025971-43026059)
chr8 (202-321)||(12587849-12587968)
chr8 (202-321)||(27082642-27082761)
chr8 (165-321)||(31933653-31933809)
chr8 (203-297)||(11727315-11727409)
chr8 (203-321)||(16223130-16223248)
chr8 (164-321)||(8803582-8803740)
chr8 (164-321)||(1205194-1205351)
chr8 (164-297)||(33198093-33198226)
chr8 (164-321)||(36694732-36694889)
chr8 (202-321)||(40862686-40862806)
chr8 (205-319)||(6098320-6098434)
chr8 (227-321)||(9864415-9864509)
chr8 (164-321)||(33906479-33906634)
chr8 (202-321)||(18259346-18259465)
chr8 (203-321)||(12876377-12876495)
chr8 (203-297)||(39098924-39099018)
chr8 (234-321)||(1149756-1149843)
chr8 (203-321)||(10555010-10555127)
chr8 (164-236)||(13307931-13308003)
chr8 (165-226)||(9864533-9864594)
chr8 (274-321)||(13307889-13307936)
chr8 (203-235)||(41910863-41910895)
[»] chr5 (52 HSPs)
chr5 (164-321)||(38527987-38528144)
chr5 (165-321)||(39573079-39573235)
chr5 (164-309)||(22981073-22981218)
chr5 (164-321)||(35511232-35511389)
chr5 (164-309)||(36867042-36867187)
chr5 (164-309)||(40133665-40133810)
chr5 (175-321)||(15992301-15992447)
chr5 (168-321)||(2888199-2888352)
chr5 (164-321)||(22255450-22255607)
chr5 (164-321)||(35934164-35934321)
chr5 (164-297)||(42343013-42343146)
chr5 (203-321)||(22973871-22973989)
chr5 (164-321)||(8437233-8437390)
chr5 (164-321)||(14409091-14409248)
chr5 (164-321)||(24886355-24886512)
chr5 (168-297)||(25669868-25669997)
chr5 (164-321)||(25889638-25889795)
chr5 (164-309)||(27330584-27330729)
chr5 (203-321)||(7208653-7208771)
chr5 (164-321)||(19120127-19120284)
chr5 (164-297)||(22019915-22020048)
chr5 (164-321)||(25500676-25500833)
chr5 (164-321)||(31705362-31705519)
chr5 (168-309)||(36860704-36860845)
chr5 (165-321)||(31786397-31786553)
chr5 (203-321)||(35826275-35826393)
chr5 (176-321)||(699418-699563)
chr5 (164-321)||(17157781-17157938)
chr5 (164-321)||(26269077-26269234)
chr5 (164-321)||(28416301-28416458)
chr5 (164-321)||(33908501-33908657)
chr5 (202-321)||(8741673-8741792)
chr5 (165-297)||(9200516-9200648)
chr5 (165-309)||(12910635-12910779)
chr5 (164-288)||(43254156-43254280)
chr5 (166-321)||(32563408-32563563)
chr5 (204-321)||(5830160-5830278)
chr5 (203-297)||(7693513-7693607)
chr5 (203-321)||(30969113-30969231)
chr5 (164-308)||(27318238-27318383)
chr5 (164-321)||(43308410-43308567)
chr5 (202-321)||(5837823-5837942)
chr5 (202-321)||(15724756-15724875)
chr5 (202-321)||(35504633-35504752)
chr5 (203-297)||(8467018-8467112)
chr5 (164-270)||(23115980-23116086)
chr5 (164-258)||(23954552-23954646)
chr5 (166-321)||(13956116-13956269)
chr5 (203-302)||(21088558-21088654)
chr5 (238-321)||(1428983-1429069)
chr5 (202-265)||(14919327-14919390)
chr5 (164-194)||(11898210-11898240)
[»] chr2 (41 HSPs)
chr2 (166-321)||(44913932-44914090)
chr2 (164-309)||(4167202-4167347)
chr2 (164-321)||(41961108-41961265)
chr2 (164-297)||(33660155-33660288)
chr2 (165-309)||(43648024-43648168)
chr2 (164-321)||(11366158-11366316)
chr2 (164-318)||(19424420-19424574)
chr2 (164-321)||(18494059-18494216)
chr2 (167-321)||(39167150-39167304)
chr2 (164-321)||(2325156-2325313)
chr2 (202-321)||(5881797-5881916)
chr2 (202-321)||(7006754-7006873)
chr2 (169-321)||(33709015-33709167)
chr2 (166-321)||(3177207-3177362)
chr2 (164-321)||(19289101-19289258)
chr2 (164-321)||(31862120-31862277)
chr2 (202-321)||(43770664-43770783)
chr2 (164-321)||(4763899-4764057)
chr2 (203-308)||(26357858-26357963)
chr2 (164-302)||(35959179-35959317)
chr2 (166-321)||(41051083-41051235)
chr2 (210-321)||(19500739-19500850)
chr2 (202-321)||(41465769-41465888)
chr2 (164-321)||(27349731-27349883)
chr2 (202-321)||(13711727-13711846)
chr2 (164-287)||(29241923-29242046)
chr2 (203-321)||(31570551-31570669)
chr2 (202-297)||(18257354-18257449)
chr2 (203-282)||(33902321-33902400)
chr2 (203-297)||(41463407-41463501)
chr2 (164-251)||(45328028-45328114)
chr2 (203-256)||(33550800-33550853)
chr2 (202-309)||(37905990-37906098)
chr2 (237-321)||(4478633-4478717)
chr2 (236-321)||(4263926-4264011)
chr2 (218-259)||(17053963-17054004)
chr2 (218-259)||(17071604-17071645)
chr2 (203-233)||(4263726-4263756)
chr2 (91-127)||(9200179-9200215)
chr2 (281-321)||(36642256-36642296)
chr2 (253-321)||(44286217-44286285)
[»] scaffold0002 (3 HSPs)
scaffold0002 (202-302)||(415-515)
scaffold0002 (202-321)||(408227-408346)
scaffold0002 (203-321)||(93900-94017)
[»] scaffold0291 (1 HSPs)
scaffold0291 (164-321)||(8155-8312)
[»] scaffold0318 (1 HSPs)
scaffold0318 (165-321)||(12177-12332)
[»] scaffold0061 (1 HSPs)
scaffold0061 (164-321)||(44224-44381)
[»] scaffold0017 (1 HSPs)
scaffold0017 (164-321)||(154406-154563)
[»] scaffold0022 (1 HSPs)
scaffold0022 (164-309)||(145775-145921)
[»] scaffold0008 (1 HSPs)
scaffold0008 (164-259)||(267606-267701)


Alignment Details
Target: chr7 (Bit Score: 159; Significance: 1e-84; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 63 - 321
Target Start/End: Complemental strand, 32432953 - 32432695
Alignment:
Q  63 attacgccgttaatc-tgtccgaatagcaaaatcaatcatcttaaatataatgtccatatacctagatgacattgtgtttcctaatgccacattnnnnnn 161  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||          
T  32432953 attacaccgttaatcctgtccgaatagcaaaatcaatcatcttaaatacaatgtccatatacctagatgacattgtgtttcctaatgccacattaaaaaa 32432854  T
Q  162 nngggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattca 261  Q
      || ||||||||||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32432853 aagg-agcttctacggtgcagtcaggaaactgacttttttaaaaaagttacttttaatcttaatgtttgattcatttttaaattgttgattattgattca 32432755  T
Q  262 tgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||||  ||||||||||    
T  32432754 tgattaataataattcatctagtaatgcttgcaacaccttggacttacatgtactatttt 32432695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 29173922 - 29173765
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||| ||||||||| |||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29173922 gggagcttctacgatgcagtcagaaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 29173823  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| |||||| | |||||||||    
T  29173822 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacagatactatttt 29173765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 15612520 - 15612677
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| ||||||||        |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  15612520 gggagcttctacggtgcagtcatgaaactgactttttttaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattactgattaatg 15612619  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || || ||||||||||||| ||||| |||||||| |||  |||||| |||||||||||    
T  15612620 atcaacaataattcatctagtaatgcttgcaacatcttagacttacaggtactatttt 15612677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 17842345 - 17842502
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| |||| |||       | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  17842345 gggagcttctacggtgcagtcaagaaattgacttttttggaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatg 17842444  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||||||||| |||||||| |||| ||||||  ||||||||||    
T  17842445 atcaatagtaattcatctaataatgcttgcaacatcttggacttacatgtactatttt 17842502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 309
Target Start/End: Complemental strand, 4583319 - 4583174
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||| ||| ||| |||       |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  4583319 gggagcttctacggtgcagccagaaaattgacttttttgaaaaagttaattttaatcttaatgtttaattcatttttaaattgttgatgactgattcatg 4583220  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    ||||||| ||||||||| | ||||| |||||||| |||||||||||    
T  4583219 attaatagtaattcatccagtaatgcttgcaacatcttgaacttac 4583174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 6546919 - 6546762
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  6546919 gggagcttctacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattactgattaatg 6546820  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| ||||  || |||  |||||| |||||||||||    
T  6546819 atcaatagtaattcatctagtaatgcttgcctcatcttagacttacaggtactatttt 6546762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 37110274 - 37110117
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| |||| |||       | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  37110274 gggagcttctacggtgcagtcaagaaattgatttttttggaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatg 37110175  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  37110174 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 37110117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 166 - 321
Target Start/End: Complemental strand, 24212140 - 24211984
Alignment:
Q  166 gagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgat 265  Q
    |||||||||||||||||||||||||||||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||    
T  24212140 gagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgat 24212041  T
Q  266 taataata-attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
     |||| || ||||||||| ||||| |||||||| |||| |||||  |||||||||||    
T  24212040 caatagtatattcatctagtaatgcttgcaacatcttggacttataggtactatttt 24211984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 18797688 - 18797570
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||||| ||||    
T  18797688 aaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaacatcttg 18797589  T
Q  303 aacttacgggtactatttt 321  Q
     |||||| |||||||||||    
T  18797588 gacttacaggtactatttt 18797570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 7335193 - 7335036
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| ||||||||||||||| |||       |||||| |||||||| |||||||||||||||||||||||||||| |||||| |||||| |||    
T  7335193 gggagcttctatggtgcagtcaggaaattgacttttttgaaaaaattaattttgatcttaatgtttgattcatttttaaattattgatttctgattaatg 7335094  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||||||| ||||||||||| ||||| |||||||| |||| | |||| |||||||||||    
T  7335093 attaatagtaattcatctagtaatgcttgcaacatcttggatttacaggtactatttt 7335036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 30055927 - 30055770
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||||||| |||       || |||||||||||| || |||| | |||||||||||||||||||||||||||||||| |||    
T  30055927 gggagcttctacggtgcagtcaggaaattgacttttttgataaagttaattttgattttaacgattgattcatttttaaattgttgattactgattaatg 30055828  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  30055827 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 30055770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 37703259 - 37703416
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| ||||||||||| ||| |||       ||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||| |||    
T  37703259 gggagcttctatggtgcagtcagtaaattgacttttttgaaaaagttaattttgatcttaatgtttaattcatttttaaattgttgattattgattaatg 37703358  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| |||||||||||||| |||| |||||| | |||||||||    
T  37703359 atcaatagtaattcatctagtaatgtttgcaacatcttggacttacagatactatttt 37703416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 43925457 - 43925357
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| |||||||| |||    
T  43925457 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattagtgattcatgattaatagtaattcatctagtaatgcttgcaacatctt 43925358  T
Q  302 g 302  Q
    |    
T  43925357 g 43925357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 22687593 - 22687474
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||||| |||    
T  22687593 gaaaaagttaattttaatcttaatgtatgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctattaatgcttgcaacatctt 22687494  T
Q  302 gaacttacgggtactatttt 321  Q
    | ||||||  ||||||||||    
T  22687493 ggacttacatgtactatttt 22687474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 203 - 309
Target Start/End: Original strand, 25691344 - 25691450
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||||||||||||  |||    
T  25691344 aaaaatttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgtttgcaacattttg 25691443  T
Q  303 aacttac 309  Q
    |||||||    
T  25691444 aacttac 25691450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 309
Target Start/End: Original strand, 26587853 - 26587998
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||| ||| ||| ||||||||       |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  26587853 gggagcttctacggcgcaatcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgatttatttttaaattgttgattactgattaatg 26587952  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    || |||| ||||||||||| |||||  ||||||| |||| ||||||    
T  26587953 atcaatagtaattcatctagtaatgcctgcaacatcttggacttac 26587998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 26980706 - 26980549
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| |||||||||| ||||||||       ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||    
T  26980706 gggagcttctaaggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattaccgattaatg 26980607  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || || ||||||||||||| ||||  |||||||| |||  |||||| | |||||||||    
T  26980606 atcaacaataattcatctagtaatacttgcaacatcttagacttacagatactatttt 26980549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 35353508 - 35353351
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| |||||||||||||||||||       ||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| |||    
T  35353508 gggagcttctaaggtgcagtcaggaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgttgattgctgattaatg 35353409  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| | ||||||||| ||||| |||||||| |||| |||||   ||||||||||    
T  35353408 atcaatagtgattcatctagtaatgcttgcaacatcttggacttaaatgtactatttt 35353351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 167 - 321
Target Start/End: Original strand, 9355590 - 9355744
Alignment:
Q  167 agcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgatt 266  Q
    |||||||| ||||||| |||||||||||       ||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| |||||     
T  9355590 agcttctatggtgcaggcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattattgattaatgatc 9355689  T
Q  267 aataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||||  |||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  9355690 aatagcaattcatctagtaatgcttgcaacatcttggacttacaagtactatttt 9355744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 164 - 319
Target Start/End: Original strand, 15672518 - 15672675
Alignment:
Q  164 gggagcttctac--ggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattca 261  Q
    ||||||||||||  |||||||||||||||||||       |||||| |||||||||| |||||||||| ||||||||||||||||||||||| |||| ||    
T  15672518 gggagcttctacagggtgcagtcaggaaactgacttttttgaaaaaattaattttaaccttaatgtttaattcatttttaaattgttgattattgatgca 15672617  T
Q  262 tgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatt 319  Q
    |||| |||| ||||||||||| ||||| ||||||||  ||| |||||| |||||||||    
T  15672618 tgatcaatagtaattcatctagtaatgcttgcaacattttggacttacaggtactatt 15672675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 8861685 - 8861528
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||| |||||||||| | ||||||||       |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  8861685 gggagcttcaacggtgcagtgatgaaactgacttttttgaaaaagttaattttaatcttagtgtttgattcatttttaaattgttgattactgattaatg 8861586  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| || |||||||| |||||  ||||||| |||  ||||||  ||||||||||    
T  8861585 atcaatagtatttcatctagtaatgcatgcaacatcttagacttacatgtactatttt 8861528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 31520502 - 31520659
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| |||||||| ||||||||||       ||||||||||||| | ||||||||||||||||||||||||||||||| ||||| |||| |||    
T  31520502 gggagcttctatggtgcagttaggaaactgacttttttgaaaaagttaattatgatcttaatgtttgattcatttttaaattgttaattacggattaatg 31520601  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||| | ||||| |||||||| |||| |||||| | |||||||||    
T  31520602 atcaatagtaattcatcgagtaatgcttgcaacatcttggacttacagatactatttt 31520659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 32820853 - 32820971
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||| ||||| |||||||| |||     
T  32820853 aaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattattgatgaatgattaatagtaattcatctagtaatgcttgcaacatctta 32820952  T
Q  303 aacttacgggtactatttt 321  Q
     ||||||  ||||||||||    
T  32820953 gacttacatgtactatttt 32820971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 179 - 321
Target Start/End: Original strand, 46480905 - 46481047
Alignment:
Q  179 gcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattca 278  Q
    ||||||||||||||||       ||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||||| ||||| |||| |||||||    
T  46480905 gcagtcaggaaactgacttttttgaaaaagttaattatgatcttaatgttttatttatttttaaattgttgattactgattaatgatcaatagtaattca 46481004  T
Q  279 tctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    |||| |||||||||||||| |||  ||||||  ||||||||||    
T  46481005 tctagtaatgtttgcaacatcttagacttacatgtactatttt 46481047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 12390410 - 12390567
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||| |||||||||| |||       | ||||||||||||| ||||||||||||  ||||||||||||||||  |||||||||| |||    
T  12390410 gggagcttctacggtgaagtcaggaaattgacttttttggaaaagttaattttgatcttaatgtttatttcatttttaaattgtcaattactgattaatg 12390509  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  12390510 ataaatagtaattcatctagtaatggttgcaacatcttggacttacatgtactatttt 12390567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 276
Target Start/End: Complemental strand, 38258979 - 38258867
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||| |||||||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  38258979 gggagcttctacggtgcagtcagaaaactgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 38258880  T
Q  264 attaataataatt 276  Q
    || |||| |||||    
T  38258879 atcaatagtaatt 38258867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 170 - 309
Target Start/End: Original strand, 31578831 - 31578970
Alignment:
Q  170 ttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaat 269  Q
    ||||| |||||||||||||||||||       ||||||||||||||| || ||| ||||||||||||||||||||| ||||||| ||||| ||||| |||    
T  31578831 ttctatggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttattgtttgattcatttttaaattattgattattgattaatgatcaat 31578930  T
Q  270 aataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    | ||||||||||| ||||| |||||||| |||| ||||||    
T  31578931 agtaattcatctagtaatgcttgcaacatcttggacttac 31578970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 11071546 - 11071446
Alignment:
Q  221 ttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactattt 320  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||| |||||||||||||| |||| |||||| |||| |||||    
T  11071546 ttaatgtttgattcatttttaaattgttgattaatgattaatgatcaatagtaattcatctagtaatgtttgcaacatcttggacttacaggtattattt 11071447  T
Q  321 t 321  Q
    |    
T  11071446 t 11071446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 167 - 297
Target Start/End: Complemental strand, 23111589 - 23111459
Alignment:
Q  167 agcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgatt 266  Q
    |||||||||||| ||||||| |||||||        |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||     
T  23111589 agcttctacggtacagtcagaaaactgacttttttaaaaaagttaactttgatcttaatgtttgattcatttttaaattgttgattactgatttatgatc 23111490  T
Q  267 aataataattcatctaataatgtttgcaaca 297  Q
    |||| |||||| |||| ||||| || |||||    
T  23111489 aatagtaattcttctagtaatgctttcaaca 23111459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 165 - 321
Target Start/End: Complemental strand, 27284145 - 27283987
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnngaaaaag-ttaattttaatcttaatgtttgattc-atttttaaattgttgattactgattcat 262  Q
    |||||||||||||||||||||||||| |||         ||||| |||||||| || |||||||||||||  ||||||||||| ||||||||||||| ||    
T  27284145 ggagcttctacggtgcagtcaggaaattgactttttttgaaaagattaattttgattttaatgtttgattttatttttaaattattgattactgattaat 27284046  T
Q  263 gattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||| |||| ||||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  27284045 gatcaatagtaattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 27283987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 164 - 309
Target Start/End: Original strand, 10358975 - 10359120
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||| | |||||| |       ||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| |||    
T  10358975 gggagcttctacggtgcagttaagaaactaacttttttgaaaaagttaattttgatcataatgtttgattcatttttaaattgttgattattgattaatg 10359074  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    || |||| ||| |||| || ||||| |||||| | |||| ||||||    
T  10359075 atcaatagtaaatcatttagtaatgcttgcaaaatcttggacttac 10359120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 176 - 321
Target Start/End: Complemental strand, 10481993 - 10481848
Alignment:
Q  176 ggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataat 275  Q
    ||||||||||| |||||||       ||||||||||||||| |||||||| ||| ||| |||||||||||||| |||||||||| | ||| |||| ||||    
T  10481993 ggtgcagtcagaaaactgacttttttgaaaaagttaattttgatcttaatatttaatttatttttaaattgttaattactgattaacgatcaatagtaat 10481894  T
Q  276 tcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||||||| ||||  |||||||| |||| |||||||| |||||||||    
T  10481893 tcatctagtaatacttgcaacatcttggacttacggatactatttt 10481848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 37347383 - 37347264
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||| ||||| |||| ||||| |||| ||||||||| | ||||| |||||| | |||    
T  37347383 gaaaaagttaattatgatcttaatgtttgattcatttttaaattgttaattacggattaatgatcaatagtaattcatcgagtaatgcttgcaatatctt 37347284  T
Q  302 gaacttacgggtactatttt 321  Q
    | |||||| | |||||||||    
T  37347283 ggacttacagatactatttt 37347264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 164 - 320
Target Start/End: Original strand, 41764839 - 41764995
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| |||||||||| |||| ||||| |||       ||||| ||||||||| ||||||||||| | ||||||||||||||||||||| |||||| |||    
T  41764839 gggagtttctacggtggagtcgggaaattgacttttttgaaaaggttaattttgatcttaatgttcggttcatttttaaattgttgattgctgattaatg 41764938  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactattt 320  Q
    || |||||||||||||| | ||||| |||||| | |||| ||||||  |||||||||    
T  41764939 atcaataataattcatccagtaatgcttgcaaaatcttggacttacatgtactattt 41764995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 164 - 320
Target Start/End: Original strand, 48928058 - 48928214
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||| || ||| |||        ||||| |||||||| |||| |||||| |||| ||||||||||||||||||  ||||| |||    
T  48928058 gggagcttctacggtgcagttagaaaattgacttttttaaaaaaattaattttgatctaaatgttcgatttatttttaaattgttgattgttgattaatg 48928157  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactattt 320  Q
    || |||| ||||||||||| |||||||||||||| |||| ||||||  |||||||||    
T  48928158 atcaatagtaattcatctagtaatgtttgcaacatcttggacttacatgtactattt 48928214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 5657241 - 5657399
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatctt-aatgtttgattcatttttaaattgttgattactgattcat 262  Q
    ||||||||||||  |||||| | ||||||||       ||||||||||||||||||||| |||| || ||||||||||||||| ||||||||| ||| ||    
T  5657241 gggagcttctacaatgcagttatgaaactgacatttttgaaaaagttaattttaatctttaatgatttattcatttttaaatttttgattactcattaat 5657340  T
Q  263 gattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||| |||| ||||||||||| ||||| |||||||| |||  ||||||  ||||||||||    
T  5657341 gatcaatagtaattcatctagtaatgcttgcaacatcttagacttacatgtactatttt 5657399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 34361975 - 34362096
Alignment:
Q  202 gaaaaagttaattttaa-tctt-aatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacc 299  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||| || ||||||| ||||| || | ||||||||||| |||||||||||| | |    
T  34361975 gaaaaagttaattttaaatctttaatgtttgattcatttttaaattgttaatgactgattaatgatcaaaagtaattcatctagtaatgtttgcaatatc 34362074  T
Q  300 ttgaacttacgggtactatttt 321  Q
    ||| |||||| | |||||||||    
T  34362075 ttggacttacagatactatttt 34362096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 44411345 - 44411446
Alignment:
Q  208 gttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaactt 307  Q
    ||||||| | |||||||||||| ||||||||||||||||||||||||||||| ||| | |||| ||||||||||| ||||| |||||||| |||| ||||    
T  44411345 gttaattatgatcttaatgtttcattcatttttaaattgttgattactgattaatggtcaatattaattcatctagtaatgcttgcaacatcttggactt 44411444  T
Q  308 ac 309  Q
    ||    
T  44411445 ac 44411446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 21992027 - 21991879
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||| | ||| ||||||||       ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    |||    
T  21992027 gggagcttctacggtgtaatcatgaaactgacttttttgaaaaggttaattttaatcttaatgtttgattcatttttaaattgttgattaatg----atg 21991932  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||     || |||||||| |||| |||||| |||||||||||    
T  21991931 atcaatagtaattcatct-----tgcttgcaacatcttggacttacaggtactatttt 21991879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 37704525 - 37704425
Alignment:
Q  221 ttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactattt 320  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||| |||| ||||||||||  ||||| |||||||| |||| |||||| | ||||||||    
T  37704525 ttaatgtttgattcatttgtaaattgttgattactaattaatgatcaatagtaattcatctggtaatgcttgcaacatcttggacttacagatactattt 37704426  T
Q  321 t 321  Q
    |    
T  37704425 t 37704425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 233 - 321
Target Start/End: Complemental strand, 12166074 - 12165986
Alignment:
Q  233 tcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||||| |||  |||||| | |||||||||    
T  12166074 tcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaacatcttagacttacagatactatttt 12165986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 32593006 - 32593124
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||||||||||||| |||||||||||  ||||||||| |||||||||||| |||||| |||||  ||| ||||| ||||| |||| |||| |||| |||    
T  32593006 gaaaaagttaattttgatcttaatgttcaattcatttt-aaattgttgattgctgattaatgatccatagtaatttatctagtaatatttgtaacatctt 32593104  T
Q  302 gaacttacgggtactatttt 321  Q
    | ||||||  ||||||||||    
T  32593105 ggacttacatgtactatttt 32593124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 44599066 - 44598978
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgatta 253  Q
    ||||| |||||||||||||||| ||||||||       |||||| |||||||||||||||| | |||||||| |||||||||||||||||    
T  44599066 gggagtttctacggtgcagtcatgaaactgatttttttgaaaaaattaattttaatcttaacgattgattca-ttttaaattgttgatta 44598978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 12166289 - 12166215
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcattt 238  Q
    ||||||||||||  |||||||| ||||||||        ||||||||||||||||||||||||||||||||||||    
T  12166289 gggagcttctacactgcagtcatgaaactgacttttctaaaaaagttaattttaatcttaatgtttgattcattt 12166215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 32435558 - 32435485
Alignment:
Q  1 caaaatacccttaaatttgaataaaatttcaac-nnnnnnnnnntccaaatgattgacaataaattacgccgtt 73  Q
    |||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||    
T  32435558 caaaatacccttaaatttgaataaaatttcaacaacaaaaaaaatccaaatgattgacaataaattacgccgtt 32435485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 38053751 - 38053704
Alignment:
Q  274 attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||||||| |||||||||||||||| |||| |||||| |||||||||||    
T  38053751 attcatcaaataatgtttgcaacatcttggacttacaggtactatttt 38053704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 5e-50; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 3879698 - 3879855
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||| ||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3879698 gggaccttctacggtgcagtcaggaaactgatttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 3879797  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  3879798 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacaagtactatttt 3879855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 6090941 - 6091098
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||| ||||| |        |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  6090941 gggagcttctacggtgcagtcagaaaacttacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatg 6091040  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  6091041 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 6091098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 20768507 - 20768350
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||||||| |||       ||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| |||    
T  20768507 gggagcttctacggtgcagtcaggaaattgatttttttgaaaaagttaattttgatcttaatgttcaattcatttttaaattgttgattactgattaatg 20768408  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| ||||||||||||| ||||||  ||||||||||    
T  20768407 atcaatagtaattcatctagtaatgcttgcaacaccttggacttacatgtactatttt 20768350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 165 - 321
Target Start/End: Complemental strand, 1946260 - 1946102
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnng-aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||||||||||       | |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  1946260 ggagcttctacggtgcagtcaggaaactgacttttttgaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 1946161  T
Q  264 attaataata-attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| || ||||||||||||||| ||| |||| |||| ||||||  ||||||||||    
T  1946160 atcaatagtatattcatctaataatgcttgtaacatcttggacttacatgtactatttt 1946102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 33892809 - 33892928
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| |||| |||||||| || |||||||||||||| |||    
T  33892809 gaaaaagttaattttaaccttaatgtttgattcatttttaaattgttgattattgattaatgatcaatagtaattcatttagtaatgtttgcaacatctt 33892908  T
Q  302 gaacttacgggtactatttt 321  Q
    | ||||||  ||||||||||    
T  33892909 ggacttacatgtactatttt 33892928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 203 - 297
Target Start/End: Original strand, 21016916 - 21017010
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaaca 297  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||    
T  21016916 aaaaagttaattttaatcttaatatttgattcatttataaattgttgattactgattcatgattaatagtaattcatctagtaatgcttgcaaca 21017010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 5627817 - 5627659
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||||||||||||        ||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||| |||    
T  5627817 gggagcttctacggtgcagtcaggaaactgatttttttaaaaaaattaattttgattttaatatttgattcatttttaaattgttgattactgattaatg 5627718  T
Q  264 attaataata-attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| || ||||| ||| ||||| |||||||| |||| |||||| |||||||||||    
T  5627717 atcaatagtatattcacctagtaatgcttgcaacatcttggacttacaggtactatttt 5627659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 166 - 321
Target Start/End: Original strand, 7054533 - 7054689
Alignment:
Q  166 gagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgat 265  Q
    |||||| ||||||||||||| ||||||||       ||||||||||||||| || |||||||||||||||| |||||||||||||||| ||||| |||||    
T  7054533 gagcttttacggtgcagtcaagaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatctttaaattgttgattaatgattaatgat 7054632  T
Q  266 taataata-attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
     |||| || |||||| || |||||||||||||| |||| |||||| | |||||||||    
T  7054633 caatagtatattcatttagtaatgtttgcaacatcttggacttacagttactatttt 7054689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 7234791 - 7234951
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttga---ttactgattc 260  Q
    |||||||| ||||||| |||||||||| |||       ||||||||||||||| ||||||||||| |||| ||||||||||||||||   ||  |||||     
T  7234791 gggagcttttacggtgtagtcaggaaaatgatttttttgaaaaagttaattttgatcttaatgttcgatttatttttaaattgttgattgttgttgatta 7234890  T
Q  261 atgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||||| |||| ||||||||||| |||||||||||||| |||| ||||||  ||||||||||    
T  7234891 atgatcaatagtaattcatctagtaatgtttgcaacatcttggacttacatgtactatttt 7234951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 209 - 320
Target Start/End: Original strand, 4318626 - 4318737
Alignment:
Q  209 ttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaactta 308  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||||| |||| ||||||||||| ||||| |||||||| |||| ||||     
T  4318626 ttaattttaattttaatgtttgatttatttttaaattgttgattaatgattaatgatcaatagtaattcatctagtaatgcttgcaacatcttggacttt 4318725  T
Q  309 cgggtactattt 320  Q
    |  |||||||||    
T  4318726 cccgtactattt 4318737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 33619219 - 33619098
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactg---attcatgattaataataattcatctaataatgtttgcaacacc 299  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||   ||| ||||| |||| ||||||||||| ||||| ||||||||      
T  33619219 aaaaagttaattttaatcttaatgttcgattcatttttaaattgttgattgctgatcattaatgatcaatagtaattcatctagtaatgcttgcaacata 33619120  T
Q  300 ttgaacttacgggtactatttt 321  Q
    ||| ||||||  ||||||||||    
T  33619119 ttggacttacatgtactatttt 33619098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 172 - 321
Target Start/End: Complemental strand, 8513638 - 8513496
Alignment:
Q  172 ctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataa 271  Q
    |||||||||||||| ||||||||       |||||||||||||||||| |||||||||||||||||||||||||||||||||       ||||| ||||     
T  8513638 ctacggtgcagtcatgaaactgacttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgatta-------atgatcaatag 8513546  T
Q  272 taattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||||||||||| ||||| |||||| |  ||| |||||| |||||||||||    
T  8513545 taattcatctagtaatgcttgcaagattttggacttaccggtactatttt 8513496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 6089283 - 6089171
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||       ||||| |||| |||||||| || ||||| ||||||||  ||    
T  6089283 gaaaaaattaattttaattttaatgtttgattcatttttaaattgttgatta-------atgatcaatagtaattcatatagtaatgcttgcaacatttt 6089191  T
Q  302 gaacttacgggtactatttt 321  Q
    | |||||| |||||||||||    
T  6089190 ggacttactggtactatttt 6089171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 29182548 - 29182432
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||  ||||| |||||    | ||||||||||| ||||  |||||||| |||    
T  29182548 gaaaaagttaattttagtcttaatgattgattcatttttaaattgttgattgttgattaatgat---cagtaattcatctagtaatacttgcaacatctt 29182452  T
Q  302 gaacttacgggtactatttt 321  Q
      ||||||  ||||||||||    
T  29182451 agacttacaagtactatttt 29182432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 33724062 - 33724113
Alignment:
Q  208 gttaattttaatcttaatgtttgattcatttttaaattgttgattactgatt 259  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  33724062 gttaattttgatcttaatgtttgattcatttttaaattgttgcttaatgatt 33724113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 4015875 - 4015718
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4015875 gggagcttctacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatg 4015776  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  4015775 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 4015718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 21194023 - 21193866
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  21194023 gggagcttctacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaata 21193924  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| |||||||| || ||||| |||||||| ||||||||||||| |||||||||    
T  21193923 atcaatagtaattcatttagtaatggttgcaacatcttgaacttacggctactatttt 21193866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 33378545 - 33378702
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||||||||||||       |||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| |||    
T  33378545 gggagcttctacggtgcagtcaggaaactgacttttttgaaaaaattaattttaatcttaatgtttgattcatttttaaatcgttgattattgattaatg 33378644  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| |||||||||||||| |||||||||||  ||||||||||    
T  33378645 atcaatagtaattcatctagtaatgtttgcaacatcttgaacttacatgtactatttt 33378702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 165 - 297
Target Start/End: Complemental strand, 39283067 - 39282935
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatga 264  Q
    ||||||||||||||||||||||||||||||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||    
T  39283067 ggagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatga 39282968  T
Q  265 ttaataataattcatctaataatgtttgcaaca 297  Q
    |||||| ||||||||||| ||||| ||||||||    
T  39282967 ttaatagtaattcatctagtaatgcttgcaaca 39282935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 22622478 - 22622635
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||| ||||||||||||||||||||||       ||||||||||||||| || |||||||||||||||||||||||| |||||||||||||| |||    
T  22622478 gggagcttttacggtgcagtcaggaaactgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaatagttgattactgattaatg 22622577  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  22622578 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 22622635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 40552019 - 40552176
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||| |||||||||       ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||     
T  40552019 gggagcttctacggtgcagtctggaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaata 40552118  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| | || ||||||  ||||||||||    
T  40552119 atcaatagtaattcatctagtaatgcttgcaacatcatggacttacatgtactatttt 40552176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 309
Target Start/End: Original strand, 53228912 - 53229057
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||||| ||||||       | ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||    
T  53228912 gggagcttctacggtgcagtcaggcaactgatttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattattgattaatg 53229011  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    || |||| ||||||||||| ||||| |||||||| |||||||||||    
T  53229012 atcaatactaattcatctagtaatgcttgcaacatcttgaacttac 53229057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 26941020 - 26941177
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||| |||||||       ||||||||||||||| || |||| | |||||||||||||||||||||||||||||||| |||    
T  26941020 gggagcttctacggtgcagtcagaaaactgacttttttgaaaaagttaattttgattttaacgcttgattcatttttaaattgttgattactgattaatg 26941119  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  26941120 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 26941177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 48355357 - 48355200
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| |||||||| |||||| |||       ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||    
T  48355357 gggagcttctatggtgcagttaggaaattgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgcttactgattaatg 48355258  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||||||||||||||| ||||  |||||||| |||| |||||| | |||||||||    
T  48355257 atcaataataattcatctagtaatacttgcaacatcttggacttacagatactatttt 48355200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 24707913 - 24708032
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| |||||||  |||    
T  24707913 gaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatgattaatagtaatttatctaataatgcttgcaacttctt 24708012  T
Q  302 gaacttacgggtactatttt 321  Q
    | ||||||  ||||||||||    
T  24708013 ggacttacatgtactatttt 24708032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 166 - 321
Target Start/End: Complemental strand, 47481937 - 47481781
Alignment:
Q  166 gagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgat 265  Q
    ||||||||||||| ||||||||||| |||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||    
T  47481937 gagcttctacggtacagtcaggaaattgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgat 47481838  T
Q  266 taataata-attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
     |||| || ||||||||| ||||| |||||||| |||||||||||  ||||||||||    
T  47481837 caatagtatattcatctagtaatgcttgcaacatcttgaacttacaagtactatttt 47481781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 166 - 321
Target Start/End: Original strand, 42505837 - 42505992
Alignment:
Q  166 gagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgat 265  Q
    ||||||||||||||||||||||||| |||       || |||||||||||| || |||| | |||||||||||||||||||||||||||||||| |||||    
T  42505837 gagcttctacggtgcagtcaggaaattgacttttttgataaagttaattttgattttaacgattgattcatttttaaattgttgattactgattaatgat 42505936  T
Q  266 taataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
     |||| ||||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  42505937 caatagtaattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 42505992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 204 - 321
Target Start/End: Original strand, 11357181 - 11357298
Alignment:
Q  204 aaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttga 303  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||||| ||||     
T  11357181 aaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaacatcttgg 11357280  T
Q  304 acttacgggtactatttt 321  Q
    ||||||  ||||||||||    
T  11357281 acttacaagtactatttt 11357298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 29099763 - 29099605
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnn-gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcat 262  Q
    |||||||||||||||||||||| ||||||||        |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||    
T  29099763 gggagcttctacggtgcagtcatgaaactgactttttttgaaaaagttaattttaatattaatgtttgattcatttttaaattgttgattgctgattaat 29099664  T
Q  263 gattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||| |||  ||||||||||| ||||| |||||||| |||| |||||  |||||||||||    
T  29099663 gatcaatggtaattcatctagtaatgcttgcaacatcttggacttaaaggtactatttt 29099605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 204 - 321
Target Start/End: Original strand, 52040722 - 52040839
Alignment:
Q  204 aaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttga 303  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| ||||||||| |||||||||||||| ||||     
T  52040722 aaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactcattaatgatcaataatcattcatctagtaatgtttgcaacatcttgg 52040821  T
Q  304 acttacgggtactatttt 321  Q
    ||||||  ||||||||||    
T  52040822 acttacatgtactatttt 52040839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 37158124 - 37157967
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||| |||    
T  37158124 gggagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactcattaatg 37158025  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||  ||||||||||| ||||| |||| |||  ||| ||||||  ||||||||||    
T  37158024 atcaatggtaattcatctagtaatgcttgcgacatattggacttacatgtactatttt 37157967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 37203484 - 37203327
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||| |||    
T  37203484 gggagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactcattaatg 37203385  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||  ||||||||||| ||||| |||| | |  ||| |||||| |||||||||||    
T  37203384 atcaatggtaattcatctagtaatgcttgcgatatattggacttacaggtactatttt 37203327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 309
Target Start/End: Original strand, 46297522 - 46297667
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||  |||||||        |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||    
T  46297522 gggagcttctacggtgcagtcaaaaaactgacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactaattaatg 46297621  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||    
T  46297622 atcaatagtaattcatctagtaatgcttgcaacatcttggacttac 46297667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 7327281 - 7327399
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||| |||||||| |||     
T  7327281 aaaaagttaattttaatcttaataattgattcatttttaaattgttgattactgattaatgattaatagtaattcatctagtaatgcttgcaacatctta 7327380  T
Q  303 aacttacgggtactatttt 321  Q
     ||||||  ||||||||||    
T  7327381 gacttacaagtactatttt 7327399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 203 - 309
Target Start/End: Original strand, 24488761 - 24488867
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||| |||| |||||| ||||| |||||||| ||||    
T  24488761 aaaaagttaattttaatattaatgtttgattcatttttaaattattgattattgattcatgattaatagtaatgcatctagtaatgcttgcaacatcttg 24488860  T
Q  303 aacttac 309  Q
    |||||||    
T  24488861 aacttac 24488867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 21009561 - 21009719
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| |||||||||||||||||||||||||        ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  21009561 gggagtttctacggtgcagtcaggaaactgacttttttaaaaaaattaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 21009660  T
Q  264 attaataata-attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| || ||||||||| ||||| |||||||| |||  |||||| |||||||||||    
T  21009661 atcaatagtatattcatctagtaatgcttgcaacatcttagacttacaggtactatttt 21009719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 167 - 321
Target Start/End: Complemental strand, 33698566 - 33698412
Alignment:
Q  167 agcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgatt 266  Q
    ||||||||||||||| | | ||||||||       |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||     
T  33698566 agcttctacggtgcatttatgaaactgacttttttgaaaaagttaattttaatcttaatgactgattcatttttaaattgttgattactgattaatgatc 33698467  T
Q  267 aataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    |||| ||||||||||| ||||| |||||| | |||  |||||| |||||||||||    
T  33698466 aatattaattcatctagtaatgcttgcaatatcttagacttacaggtactatttt 33698412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 36012556 - 36012398
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaa-ttttaatcttaatgtttgattcatttttaaattgttgattactgattcat 262  Q
    |||||||||||||||||||||| ||||||||       ||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||| ||    
T  36012556 gggagcttctacggtgcagtcatgaaactgacttttttgaaaaagttaaattttaattttaatgtttgatttatttttaaattgttgattactgattaat 36012457  T
Q  263 gattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||| |||| ||||||||||| ||||| ||||| ||  ||| |||||  |||||||||||    
T  36012456 gatcaatagtaattcatctagtaatgcttgcagcattttggacttatcggtactatttt 36012398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 22451346 - 22451227
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| |||||| |||||| ||||| |||||||||||||||| ||||| |||||||| |||    
T  22451346 gaaaaagttaattttgatcttaatgttcgattcatttttaaatttttgattgctgattaatgatcaataataattcatctagtaatgcttgcaacatctt 22451247  T
Q  302 gaacttacgggtactatttt 321  Q
    | ||||||  ||||||||||    
T  22451246 ggacttacatgtactatttt 22451227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 44186315 - 44186434
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| ||||| ||||| |||||||| |||    
T  44186315 gaaaatgttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaatttatctagtaatgcttgcaacatctt 44186414  T
Q  302 gaacttacgggtactatttt 321  Q
      |||||  |||||||||||    
T  44186415 agacttagaggtactatttt 44186434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 166 - 281
Target Start/End: Original strand, 20373025 - 20373140
Alignment:
Q  166 gagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgat 265  Q
    ||||||||| |||||||||||||||||||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||    
T  20373025 gagcttctatggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgat 20373124  T
Q  266 taataataattcatct 281  Q
     |||| ||||||||||    
T  20373125 caatagtaattcatct 20373140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 164 - 297
Target Start/End: Complemental strand, 3362671 - 3362538
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| ||||||||||||||| |||       | ||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||    
T  3362671 gggagcttctatggtgcagtcaggaaattgacttttttggaaaagttaattatgatcttaatgtttgattcatttttaaattgttgattactgattaatg 3362572  T
Q  264 attaataataattcatctaataatgtttgcaaca 297  Q
    || |||| ||||||||| | ||||| ||||||||    
T  3362571 atcaatagtaattcatccagtaatgcttgcaaca 3362538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 43975652 - 43975809
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| ||||||||||||||||| |||||||       |||||| ||||| || ||||||||||| ||||||||||||||||||||||| |||||| |||    
T  43975652 gggagtttctacggtgcagtcagaaaactgactcttttgaaaaaattaatcttgatcttaatgttcgattcatttttaaattgttgattgctgattaatg 43975751  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||| | |||| ||||||  ||||||||||    
T  43975752 atcaatattaattcatctagtaatgcttgcaaaatcttggacttacaagtactatttt 43975809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 1090102 - 1089978
Alignment:
Q  171 tctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaata 270  Q
    ||||||||| ||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||    
T  1090102 tctacggtgtagtcaggaaactgacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattattgattaatgatcaata 1090003  T
Q  271 ataattcatctaataatgtttgcaa 295  Q
     ||||||||||| ||||| ||||||    
T  1090002 gtaattcatctagtaatgcttgcaa 1089978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 297
Target Start/End: Complemental strand, 54506218 - 54506090
Alignment:
Q  170 ttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaat 269  Q
    ||||||||||||||||||||| |||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  54506218 ttctacggtgcagtcaggaaattgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaat 54506119  T
Q  270 aata-attcatctaataatgtttgcaaca 297  Q
    | || ||||||||| ||||| ||||||||    
T  54506118 agtatattcatctagtaatgcttgcaaca 54506090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 4761447 - 4761565
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||||| |||||| |||||||||| ||||||||||  ||||||||||||||  |||    
T  4761447 aaaaagttaattttgattttaatgtttgattcattttcaaattgttgatttctgattaatgattaatagtaattcatctggtaatgtttgcaacattttg 4761546  T
Q  303 aacttacgggtactatttt 321  Q
     |||||  |||||||||||    
T  4761547 gacttataggtactatttt 4761565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 44891874 - 44891756
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| || | ||||||||||| ||||| |||||||| |||     
T  44891874 aaaaagttaattttaatcttaatgattgattcatttttaaattgttgattactgattaatgatcaacagtaattcatctagtaatgcttgcaacatctta 44891775  T
Q  303 aacttacgggtactatttt 321  Q
     ||||   |||||||||||    
T  44891774 gacttgtaggtactatttt 44891756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 2008355 - 2008191
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttg-------attactg 256  Q
    |||||||| ||||||||| ||| ||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||       |||||||    
T  2008355 gggagcttttacggtgcaatcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattaatgattactg 2008256  T
Q  257 attcatgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||| ||||| |||| || |||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  2008255 attaatgatcaatattatttcatctagtaatgcttgcaacatcttggacttacaagtactatttt 2008191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 309
Target Start/End: Original strand, 14586440 - 14586585
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| |||||| ||  ||||||||       |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  14586440 gggagcttctatggtgcactcgtgaaactgacttttttgaaaaaattaattttaatcttaatgtttgatttatttttaaattgttgattactgattaatg 14586539  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    || | || ||||| ||||| ||||| |||||||| |||| ||||||    
T  14586540 atcagtagtaatttatctagtaatgcttgcaacatcttggacttac 14586585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 165 - 321
Target Start/End: Original strand, 22445826 - 22445982
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatga 264  Q
    ||||||||||  ||||||||||||||||||       | ||||||||||| | ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  22445826 ggagcttctatagtgcagtcaggaaactgacttttttggaaaagttaattatgatcttaatgtttgattcatatttaaattgttgattactgattaatga 22445925  T
Q  265 ttaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    | |||| ||||||||| | ||||  ||||||||  ||| |||||  |||||||||||    
T  22445926 tcaatagtaattcatccagtaatacttgcaacattttggacttaaaggtactatttt 22445982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 227 - 321
Target Start/End: Complemental strand, 34133288 - 34133194
Alignment:
Q  227 tttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    |||||||||||||||||||||||||||| |||||||||||| || ||||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  34133288 tttgattcatttttaaattgttgattaccgattcatgattactagtaattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 34133194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 51212537 - 51212688
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| ||||||||||| |||||||       ||||||||||||||| ||||||||      |||||||||||||||||||||  | ||| |||    
T  51212537 gggagcttctatggtgcagtcagaaaactgacatttttgaaaaagttaattttgatcttaat------ttcatttttaaattgttgatttttaattaatg 51212630  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  51212631 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 51212688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 32373885 - 32373729
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||| |||||  ||||||||       |||||||||||||||||||||| || |  ||||||||| ||||||||||||||||||| |||    
T  32373885 gggagcttctacggtacagtcgtgaaactgaattttttgaaaaagttaattttaatcttattgatgaattcatttt-aaattgttgattactgattaatg 32373787  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || ||||  |||||||||| ||||| |||||||| |||  ||||||  ||||||||||    
T  32373786 atcaatagaaattcatctagtaatgcttgcaacatcttagacttacaagtactatttt 32373729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 164 - 276
Target Start/End: Original strand, 11356918 - 11357030
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||| ||||||||||||||||  ||||||       ||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| |||    
T  11356918 gggagcatctacggtgcagtcagacaactgacttttttgaaaaagttaattttgatcttaatgttggattcatttttaaattgttgattactaattaatg 11357017  T
Q  264 attaataataatt 276  Q
    || |||| |||||    
T  11357018 atgaatagtaatt 11357030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 297
Target Start/End: Complemental strand, 40936351 - 40936256
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaaca 297  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||||||| |||| ||||| |||| ||||| ||||| ||||| ||||||||    
T  40936351 gaaaaagttaatttcaatcttaatgattgatttatttttaaattgttgattaccgattaatgatcaatagtaatttatctagtaatgcttgcaaca 40936256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 258
Target Start/End: Complemental strand, 11467226 - 11467132
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgat 258  Q
    ||||||||||||||||||||||  |||||||       |||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||    
T  11467226 gggagcttctacggtgcagtcatcaaactgacttttttgaaaaagttaattttattcttaatgattgattcatttttaaattgttgattaatgat 11467132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 203 - 295
Target Start/End: Complemental strand, 25580116 - 25580024
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaa 295  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||||||| | |||| ||||| |||| ||||||||||| ||||| ||||||    
T  25580116 aaaaagttaatcttaatcttaatgattggttcatttttaaattgttgattgcggattaatgatcaatagtaattcatctagtaatgcttgcaa 25580024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 29164179 - 29164068
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||       ||||| |||| ||||||||||| ||||| ||| |||| |||     
T  29164179 aaaaagttaattttaatcttaatgtttgatttatttttaaattgttgatta-------atgatcaatagtaattcatctagtaatgcttgtaacatctta 29164087  T
Q  303 aacttacgggtactatttt 321  Q
     ||||||  ||||||||||    
T  29164086 gacttacaagtactatttt 29164068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 233 - 321
Target Start/End: Original strand, 46994490 - 46994578
Alignment:
Q  233 tcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    |||||||||||||||||||| |||||| ||||| |||| ||||||||||| ||||| |||||| | |||| |||||| |||||||||||    
T  46994490 tcatttttaaattgttgatttctgattaatgatcaatagtaattcatctagtaatgcttgcaatatcttggacttacaggtactatttt 46994578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 50475196 - 50475082
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgatt-------aataataattcatctaataatgtttgca 294  Q
    |||||| |||||||| || ||||||||||||||||||||||||| ||||||||||||| ||||||       |||| ||||||||||| ||||| |||||    
T  50475196 gaaaaatttaattttgattttaatgtttgattcatttttaaattattgattactgattaatgattaatgatcaatactaattcatctagtaatgcttgca 50475097  T
Q  295 acaccttgaacttac 309  Q
    ||| |||| ||||||    
T  50475096 acatcttggacttac 50475082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 38592051 - 38591976
Alignment:
Q  227 tttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    ||||||||||||||||||||||||||||||||| ||||| |||| |||||  | |||||||| |||||||| ||||    
T  38592051 tttgattcatttttaaattgttgattactgattaatgatcaatagtaatttgtttaataatgcttgcaacatcttg 38591976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 3654997 - 3655106
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattc-atttttaaattgttgattactgattcatgattaataataattc--atctaataatgtttgcaacac 298  Q
    ||||| ||||||||| || |||||||||||||  ||||||||||||||||||||||||| || || |||| ||||||  ||||| ||||| ||||||||     
T  3654997 gaaaatgttaattttgattttaatgtttgattttatttttaaattgttgattactgattaataatcaatagtaattcatatctagtaatgcttgcaacat 3655096  T
Q  299 cttgaactta 308  Q
    |||| |||||    
T  3655097 cttggactta 3655106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 292
Target Start/End: Original strand, 27480164 - 27480246
Alignment:
Q  210 taattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttg 292  Q
    |||||||  |||||||||| ||||||||||||||||||||||  |||||| || || |||| ||||||||||| |||||||||    
T  27480164 taattttgttcttaatgttcgattcatttttaaattgttgatcgctgattaataatcaatagtaattcatctagtaatgtttg 27480246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 35844663 - 35844577
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttga 250  Q
    |||||||| ||||||||||| | |||| |||       |||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  35844663 gggagcttttacggtgcagttatgaaattgacttttttgaaaaagttaattttaattttaatgtttgatttatttttaaattgttga 35844577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 34133373 - 34133312
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatg 226  Q
    |||||||||| |||||||| ||||||||||       |||||||||||||||||||||||||    
T  34133373 ggagcttctaaggtgcagttaggaaactgacttttttgaaaaagttaattttaatcttaatg 34133312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 43348592 - 43348556
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcattt 238  Q
    ||||||||||||||||||||||||| |||||||||||    
T  43348592 gaaaaagttaattttaatcttaatgattgattcattt 43348556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 54828546 - 54828618
Alignment:
Q  249 gattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||||||||||| ||||| |||| ||||| ||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  54828546 gattactgattaatgatcaatagtaatttatctagtaatgcttgcaacatcttggacttacatgtactatttt 54828618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 48353963 - 48353806
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  48353963 gggagcttctacggtgcagtcatgaaactgatttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatg 48353864  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||||||||||||||| ||||| |||||| | |||| |||||| | |||||||||    
T  48353863 atcaataataattcatctagtaatgcttgcaatatcttggacttacagatactatttt 48353806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 46931831 - 46931673
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||| ||||||||||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  46931831 gggagcttctacggtgcagtaaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 46931732  T
Q  264 attaataata-attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || ||||||| ||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  46931731 atcaataatatattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 46931673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 47279611 - 47279453
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnn-gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcat 262  Q
    ||||||||||||||||||||||  |||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  47279611 gggagcttctacggtgcagtcataaaactgattttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactaattaat 47279512  T
Q  263 gattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||| |||| |||||||||||||||||||||||||| |||| |||||| | |||||||||    
T  47279511 gatcaatagtaattcatctaataatgtttgcaacatcttggacttacagatactatttt 47279453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 2960169 - 2960012
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||| ||||||||||||||||||||||||||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  2960169 gggatcttctacggtgcagtcaggaaactgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 2960070  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| |||||| | |||||||||    
T  2960069 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacagatactatttt 2960012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 27532737 - 27532893
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  27532737 gggagcttctacggtgcagtcatgaaactgatttttttgaaaaagttaattttaatcttaatgtttgattcatttttaa-ttgttgattactgattaatg 27532835  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  27532836 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 27532893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 309
Target Start/End: Complemental strand, 32216476 - 32216331
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||| |||||||        |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  32216476 gggagcttctacggtgcagtcagaaaactgacttttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatg 32216377  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    || |||| ||||||||||||||||| |||||||| |||| ||||||    
T  32216376 atcaatagtaattcatctaataatgcttgcaacatcttggacttac 32216331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 166 - 321
Target Start/End: Complemental strand, 15168515 - 15168360
Alignment:
Q  166 gagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgat 265  Q
    |||||||||||||||||| ||||||||||       ||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| |||||    
T  15168515 gagcttctacggtgcagttaggaaactgatttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgttgattgctgattaatgat 15168416  T
Q  266 taataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
     |||| ||||||||||||||||| |||||||| |||| ||||||  ||||||||||    
T  15168415 caatagtaattcatctaataatgcttgcaacatcttgtacttacatgtactatttt 15168360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 10923148 - 10922991
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| ||||||||||| |||||||       ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  10923148 gggagcttctatggtgcagtcagaaaactgactcttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatg 10923049  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| ||||||||  ||| |||||| | |||||||||    
T  10923048 atcaatagtaattcatctagtaatgcttgcaacattttggacttacagatactatttt 10922991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 11742123 - 11742280
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| ||||| || ||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  11742123 gggagtttctatggcgcagtcatgaaactgatttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatg 11742222  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  11742223 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 11742280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 309
Target Start/End: Original strand, 34012137 - 34012282
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||||||||||||        |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  34012137 gggagcttctacggtgcagtcaggaaactgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 34012236  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    || |||| |||||||| || ||||| |||||||| |||||||||||    
T  34012237 atcaatagtaattcatatagtaatgcttgcaacatcttgaacttac 34012282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 14758453 - 14758296
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| ||||||||       ||||||||||||||| ||||||||||| |||||||||||||||||||||||  ||||| |||    
T  14758453 gggagcttctacggtgcagtcacgaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgttgattgttgattaatg 14758354  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  14758353 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 14758296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 32267455 - 32267298
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||||||| |||       |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  32267455 gggagcttctacggtgcagtcaggaaattgacttttttgaaaaaattaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 32267356  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
     | |||| ||||||||||| ||||| |||||||| |||| || ||| |||||||||||    
T  32267355 ttcaatagtaattcatctagtaatgcttgcaacatcttggacctacaggtactatttt 32267298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 37451706 - 37451549
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| |||||||||||||| | |||| |||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  37451706 gggagattctacggtgcagtgaagaaattgacttttttgaaaaagttaatttttattttaatgtttgattcatttttaaattgttgattactgattaatg 37451607  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| |||||||||||||| |||| |||||| | |||||||||    
T  37451606 atcaatagtaattcatctagtaatgtttgcaacatcttggacttacagatactatttt 37451549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 238306 - 238413
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||| |||||||| |||    
T  238306 gaaaaagttgattttaatcttaatgtttgattcatttttaaattgtggattactgattcatgattaatagtaattcatctagtaatgcttgcaacatctt 238405  T
Q  302 gaacttac 309  Q
    | ||||||    
T  238406 ggacttac 238413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 39393766 - 39393648
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| |||| ||||||||||| |||||||||||||| ||||    
T  39393766 aaaaagttaattttaattttaatgttttattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgtttgcaacatcttg 39393667  T
Q  303 aacttacgggtactatttt 321  Q
     | |||| |||||||||||    
T  39393666 gatttaccggtactatttt 39393648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 204 - 321
Target Start/End: Complemental strand, 16416027 - 16415910
Alignment:
Q  204 aaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttga 303  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| |||||||| ||||     
T  16416027 aaaaattaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctaataatgcttgcaacatcttgg 16415928  T
Q  304 acttacgggtactatttt 321  Q
    ||||||  ||||||||||    
T  16415927 acttacatgtactatttt 16415910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 23999769 - 23999611
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| ||||||||||||||| |||        |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  23999769 gggagcttctatggtgcagtcaggaaattgacctttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 23999670  T
Q  264 attaataata-attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| || ||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  23999669 atcaatagtatattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 23999611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 3309537 - 3309417
Alignment:
Q  202 gaaaaagttaattttaa-tcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacct 300  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||| | ||    
T  3309537 gaaaaagttaattttaaatctaaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaatatct 3309438  T
Q  301 tgaacttacgggtactatttt 321  Q
    || ||||||||||||||||||    
T  3309437 tggacttacgggtactatttt 3309417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 3535344 - 3535187
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||| ||||| ||||||||        ||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| |||    
T  3535344 gggagcttctacggtgtagtcatgaaactgattttttttaaaaagttagttttaatcttaatgtttgattcatttttaaattgttgattgttgattaatg 3535245  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| |||||  |||||||||||    
T  3535244 atcaatagtaattcatctagtaatgcttgcaacatcttggacttaaaggtactatttt 3535187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 204 - 308
Target Start/End: Complemental strand, 21289981 - 21289877
Alignment:
Q  204 aaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttga 303  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||| ||||     
T  21289981 aaaaattaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaataataattcatctagtaatgtttgcaacatcttgg 21289882  T
Q  304 actta 308  Q
    |||||    
T  21289881 actta 21289877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 1547654 - 1547535
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  ||||||||||| ||||| |||||||| |||    
T  1547654 gaaaaaattaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatggtaattcatctagtaatgcttgcaacatctt 1547555  T
Q  302 gaacttacgggtactatttt 321  Q
    | ||||||  ||||||||||    
T  1547554 ggacttacatgtactatttt 1547535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 28770036 - 28769917
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||| ||||| |||| |||||||||||  ||||||||||||| |||    
T  28770036 gaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattattaattaatgatcaatagtaattcatctagcaatgtttgcaacatctt 28769937  T
Q  302 gaacttacgggtactatttt 321  Q
    | |||||| |||||||||||    
T  28769936 ggacttacaggtactatttt 28769917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 8222549 - 8222392
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgatt-catttttaaattgttgattactgattcat 262  Q
    ||||||||||||||| ||||||| |||||||       ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| ||    
T  8222549 gggagcttctacggtacagtcagaaaactgacttttttgaaaaagttaattttgattttaatgtttgatttcatttttaaattgttgattactgattaat 8222450  T
Q  263 gattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||| ||| |||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  8222449 gatcaat-ataattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 8222392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 19899523 - 19899681
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||| ||||||| ||||||||||       | ||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  19899523 gggagcttctacagtgcagttaggaaactgacttttttggaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 19899622  T
Q  264 attaataata-attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| || ||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  19899623 atcaatagtatattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 19899681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 164 - 309
Target Start/End: Complemental strand, 31963038 - 31962892
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaa-ttgttgattactgattcat 262  Q
    |||||||||||||||||||| | ||||||||       |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||| ||    
T  31963038 gggagcttctacggtgcagttatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgatttatttttaaaattgttgattaccgattaat 31962939  T
Q  263 gattaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    ||| |||| || |||||||||||||| |||||||| ||| |||||||    
T  31962938 gatcaatagtagttcatctaataatgcttgcaacatcttaaacttac 31962892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 47682249 - 47682406
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| ||||||||||| |||||||       ||| |||||||||||||||||||||||| |||| ||||||||||||| |||||||||| |||    
T  47682249 gggagcttctatggtgcagtcagtaaactgacttttttgaacaagttaattttaatcttaatgtttaattcttttttaaattgttaattactgattaatg 47682348  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| |||||||| || ||||| |||||||| |||| | |||| |||||||||||    
T  47682349 atcaatagtaattcatttagtaatgcttgcaacatcttggatttacaggtactatttt 47682406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 170 - 321
Target Start/End: Original strand, 27763071 - 27763223
Alignment:
Q  170 ttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaat 269  Q
    ||||||||| ||||||||||| |||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  27763071 ttctacggtacagtcaggaaattgacatttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaat 27763170  T
Q  270 aata-attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    | || ||| ||||| ||||| |||||||| ||||||||||| | |||||||||    
T  27763171 agtatatttatctagtaatgcttgcaacatcttgaacttacagatactatttt 27763223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 28564576 - 28564683
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||| |||||||||||||| |||    
T  28564576 gaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattattgattaatgatcaatagtaattcatctagtaatgtttgcaacatctt 28564675  T
Q  302 gaacttac 309  Q
    | ||||||    
T  28564676 ggacttac 28564683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 309
Target Start/End: Complemental strand, 30254843 - 30254699
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatga 264  Q
    |||| |||||||||||||||||||||||||        |||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| || |    
T  30254843 ggagtttctacggtgcagtcaggaaactgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattattgattaataa 30254744  T
Q  265 ttaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    | |||| ||||||||||| ||||| |||||||| |||| ||||||    
T  30254743 tcaatagtaattcatctagtaatgcttgcaacatcttggacttac 30254699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 164 - 295
Target Start/End: Original strand, 7078818 - 7078949
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| || |||||| |||||| ||||||||       ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||    
T  7078818 gggagtttttacggtacagtcatgaaactgatttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattattgattaatg 7078917  T
Q  264 attaataataattcatctaataatgtttgcaa 295  Q
    || |||| ||||||||||| ||||||||||||    
T  7078918 atcaatagtaattcatctagtaatgtttgcaa 7078949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 170 - 297
Target Start/End: Complemental strand, 38823629 - 38823502
Alignment:
Q  170 ttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaat 269  Q
    |||||||||||||||| ||||||||        ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| |||    
T  38823629 ttctacggtgcagtcatgaaactgacttttttaaaaaagttaattttaatcttaatatttgtttcatttttaaattgttgattactgattaatgatcaat 38823530  T
Q  270 aataattcatctaataatgtttgcaaca 297  Q
    | ||||||||||| ||||| ||||||||    
T  38823529 agtaattcatctagtaatgcttgcaaca 38823502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 167 - 321
Target Start/End: Original strand, 9902812 - 9902966
Alignment:
Q  167 agcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgatt 266  Q
    ||||||||||||||||||| |||  |||       ||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| |||||     
T  9902812 agcttctacggtgcagtcaagaatttgacttttttgaaaaagttaattttgattttaatatttgattcatttttaaattgttgattactgattaatgatc 9902911  T
Q  267 aataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    |||| ||||||||||| || || ||||| || |||| |||||| |||||||||||    
T  9902912 aatagtaattcatctagtagtgcttgcagcatcttggacttactggtactatttt 9902966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 15383355 - 15383197
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgatt-catttttaaattgttgattactgattcat 262  Q
    ||||||||||||||| ||||||||||| |||       ||||||||||||||| || ||||||||||||| ||||||||||||||||||| |||||| ||    
T  15383355 gggagcttctacggttcagtcaggaaattgatttttttgaaaaagttaattttgattttaatgtttgatttcatttttaaattgttgattgctgattaat 15383256  T
Q  263 gattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
     || |||| ||||||||||| ||||| |||||||| |||| | |||| |||||||||||    
T  15383255 aatcaatagtaattcatctagtaatgcttgcaacatcttggatttacaggtactatttt 15383197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 164 - 297
Target Start/End: Complemental strand, 22171132 - 22170999
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||| | || |||||||       ||||||||||||||| || ||||||||||||| ||||||||||||||||||||| ||| |||    
T  22171132 gggagcttctacggtgcaattagaaaactgatttttttgaaaaagttaattttgattttaatgtttgatttatttttaaattgttgattactaattaatg 22171033  T
Q  264 attaataataattcatctaataatgtttgcaaca 297  Q
    || |||| ||||| ||||||||||||||||||||    
T  22171032 atcaatagtaatttatctaataatgtttgcaaca 22170999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 170 - 309
Target Start/End: Original strand, 27563666 - 27563805
Alignment:
Q  170 ttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaat 269  Q
    ||||| |||||||||||||||||||       | ||||||||||| | ||||||||||||||||| |||||||||||||||||||||||| ||||| |||    
T  27563666 ttctatggtgcagtcaggaaactgatttttttggaaaagttaattatgatcttaatgtttgattcttttttaaattgttgattactgattaatgatcaat 27563765  T
Q  270 aataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    | ||||||||||| ||||  |||||||| |||| ||||||    
T  27563766 attaattcatctagtaatacttgcaacatcttggacttac 27563805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 167 - 321
Target Start/End: Complemental strand, 4330699 - 4330545
Alignment:
Q  167 agcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgatt 266  Q
    ||||||||||||||||||||  ||||||       | |||| |||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||     
T  4330699 agcttctacggtgcagtcagacaactgatttttttggaaaaattaattttgatcttaatgtttgattcatttttatattgttgattactgattaatgatc 4330600  T
Q  267 aataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    |||  ||||||||||| ||||| ||||||||  ||| ||||||  ||||||||||    
T  4330599 aattgtaattcatctagtaatgcttgcaacatattggacttacaagtactatttt 4330545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 204 - 321
Target Start/End: Original strand, 27227280 - 27227397
Alignment:
Q  204 aaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttga 303  Q
    ||||||||||||| || ||||||||| |||||||||||||| |||||||||||||| ||||| |||| ||||||||||| ||||| |||||||| ||||     
T  27227280 aaaagttaattttgatattaatgtttaattcatttttaaatggttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaacatcttgg 27227379  T
Q  304 acttacgggtactatttt 321  Q
    |||||| | |||||||||    
T  27227380 acttacagatactatttt 27227397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 218 - 321
Target Start/End: Original strand, 1359744 - 1359847
Alignment:
Q  218 atcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtacta 317  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||  ||| ||||||||| | ||||| ||||||||  |||||||||| |||||||    
T  1359744 atcttaatgtttgattcatttttaaattgttgattactgattaatgatcgatagtaattcatccagtaatgcttgcaacattttgaacttacaggtacta 1359843  T
Q  318 tttt 321  Q
    ||||    
T  1359844 tttt 1359847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 164 - 282
Target Start/End: Complemental strand, 15752450 - 15752332
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||| ||| |||        ||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||| |||    
T  15752450 gggagcttctacggtgcagtcagaaaattgattttttaaaaaaaattaattttgatcttaatgtttaattcatttttaaattgttgattactgattaatg 15752351  T
Q  264 attaataataattcatcta 282  Q
    || |||| |||||||||||    
T  15752350 atcaatagtaattcatcta 15752332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 164 - 258
Target Start/End: Complemental strand, 48621010 - 48620916
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgat 258  Q
    |||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  48621010 gggagcttctacggtgcagtcatgaaactgacttttctgaaaaagttaattttaatcttaatgtttgattcattttaaaattgttgattaatgat 48620916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 164 - 297
Target Start/End: Original strand, 10181762 - 10181895
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| ||||||||||||||||| |       | ||||||||||| | |||||||||||||||||||||||||||||||||||  ||||| |||    
T  10181762 gggagcttctatggtgcagtcaggaaactaacttttttggaaaagttaattatgatcttaatgtttgattcatttttaaattgttgattgttgattaatg 10181861  T
Q  264 attaataataattcatctaataatgtttgcaaca 297  Q
     | |||| ||||||||||| ||||| ||||||||    
T  10181862 ttcaatagtaattcatctagtaatgcttgcaaca 10181895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 51129240 - 51129123
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||||||||||||  || |||||  |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||||| |||    
T  51129240 gaaaaagttaattt--attttaatacttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaacatctt 51129143  T
Q  302 gaacttacgggtactatttt 321  Q
    | ||||||  ||||||||||    
T  51129142 ggacttacatgtactatttt 51129123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 25161015 - 25160896
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgatt-catttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||| ||||||||| || ||||||||||||| |||||||||||||||||||||||||| ||||| |||| |||||||| || ||||| |||||||| |||    
T  25161015 aaaaggttaattttgattttaatgtttgatttcatttttaaattgttgattactgattaatgatcaatagtaattcatatagtaatgcttgcaacatctt 25160916  T
Q  302 gaacttacgggtactatttt 321  Q
    | ||||||  ||||||||||    
T  25160915 ggacttacatgtactatttt 25160896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 204 - 321
Target Start/End: Original strand, 27266995 - 27267112
Alignment:
Q  204 aaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttga 303  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||||||| ||||| || || |||| ||||||||||| ||||| |||||||| |||      
T  27266995 aaaagttaattttgatcttaatgtttaattcatttttaaattattgattattgattaattatcaatagtaattcatctagtaatgcttgcaacatcttag 27267094  T
Q  304 acttacgggtactatttt 321  Q
    |||||| | |||||||||    
T  27267095 acttacagatactatttt 27267112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 31621341 - 31621461
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttt-taaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacct 300  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||||||||||  ||||| ||||| |||| || |||||||| ||||| ||||||||  |    
T  31621341 gaaaaagttaattttgatcttaatgttcgattcattttttaaattgttgattgatgattaatgatcaatagtagttcatctactaatgcttgcaacatat 31621440  T
Q  301 tgaacttacgggtactatttt 321  Q
    |||||||||  ||||||||||    
T  31621441 tgaacttacatgtactatttt 31621461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 308
Target Start/End: Original strand, 30326751 - 30326851
Alignment:
Q  209 ttaattttaatcttaatgtttgatt-catttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaactt 307  Q
    |||||||| || ||||| ||||||| |||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||||| |||| ||||    
T  30326751 ttaattttgattttaatatttgatttcatttttaaattgttgattactgattgatgatcaatagtaattcatctagtaatgcttgcaacatcttggactt 30326850  T
Q  308 a 308  Q
    |    
T  30326851 a 30326851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 309
Target Start/End: Complemental strand, 42721418 - 42721312
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    |||||||||||| | || ||||||||||||||||||||||||| ||||||||| ||| ||||| |||| ||||| ||||| ||||  |||||||| ||||    
T  42721418 aaaaagttaattatgattttaatgtttgattcatttttaaattattgattactcattaatgatcaatagtaattaatctagtaataattgcaacatcttg 42721319  T
Q  303 aacttac 309  Q
     ||||||    
T  42721318 gacttac 42721312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 40885185 - 40885077
Alignment:
Q  213 ttttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttacggg 312  Q
    |||||| |||||| || ||||||||||| |||| |||||| || ||| ||||| |||| ||||||||||| |||||||||||||| |||| ||||||  |    
T  40885185 ttttaaccttaatattcgattcatttttgaattattgattgctaattaatgatcaatagtaattcatctagtaatgtttgcaacatcttggacttacatg 40885086  T
Q  313 tactatttt 321  Q
    |||||||||    
T  40885085 tactatttt 40885077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 164 - 275
Target Start/End: Original strand, 33725366 - 33725478
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattca-tttttaaattgttgattactgattcat 262  Q
    |||||||| |||| |||||||||||||||||       ||||||||| ||||| ||||||||||| |||||| ||||| ||||||||||| |||||| ||    
T  33725366 gggagcttatacgttgcagtcaggaaactgatttttttgaaaaagtttattttgatcttaatgttcgattcatttttttaattgttgattgctgattaat 33725465  T
Q  263 gattaataataat 275  Q
    ||| |||| ||||    
T  33725466 gatcaatagtaat 33725478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 37618729 - 37618801
Alignment:
Q  237 ttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    ||||||||||||||||| ||||| ||| | |||| ||||||||||| ||||| |||||||| |||| ||||||    
T  37618729 ttttaaattgttgattattgattaatggtcaatactaattcatctagtaatgcttgcaacatcttggacttac 37618801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 321
Target Start/End: Complemental strand, 41926537 - 41926421
Alignment:
Q  204 aaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttga 303  Q
    |||| |||||| | || ||||||||||||||| ||||||||  ||||||| | ||| ||||| |||| ||||||||||| ||||| ||| || | ||||     
T  41926537 aaaaattaattatgattttaatgtttgattcaattttaaatcattgattattaattaatgatcaatagtaattcatctagtaatgcttg-aatatcttgg 41926439  T
Q  304 acttacgggtactatttt 321  Q
    ||||||  ||||||||||    
T  41926438 acttacaagtactatttt 41926421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 18423006 - 18422927
Alignment:
Q  223 aatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    |||||||||||||||||||||||||||||||       ||||| |||| |||||||||||  |||| |||||||| |||| ||||||    
T  18423006 aatgtttgattcatttttaaattgttgatta-------atgatcaatagtaattcatctagcaatgcttgcaacatcttggacttac 18422927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 7e-46; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 167 - 321
Target Start/End: Complemental strand, 7703931 - 7703777
Alignment:
Q  167 agcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgatt 266  Q
    ||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  7703931 agcttctacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgata 7703832  T
Q  267 aataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    |||| ||||||||||| ||||| |||||||| |||  |||||| |||||||||||    
T  7703831 aatagtaattcatctagtaatgcttgcaacatcttcgacttacaggtactatttt 7703777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 34361277 - 34361435
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  34361277 gggagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 34361376  T
Q  264 attaataata-attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| || ||||||||| ||||| |||||||| |||| |||||  |||||||||||    
T  34361377 atcaatagtatattcatctagtaatgcttgcaacatcttggacttataggtactatttt 34361435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 879334 - 879491
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| |||| |||||| |||||||        |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||    
T  879334 gggagcttctatggtgtagtcagaaaactgactttttaaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattacttattaatg 879433  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||||||||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  879434 atcaataataattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 879491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 309
Target Start/End: Complemental strand, 6864460 - 6864315
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||| |||||||       ||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| |||    
T  6864460 gggagcttctacggtgcagtcagaaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattattgattaatg 6864361  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    || |||| ||||||||||| ||||| |||||||| |||||||||||    
T  6864360 atcaatagtaattcatctagtaatgcttgcaacatcttgaacttac 6864315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 19440434 - 19440591
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||| |||    
T  19440434 gggagcttctacggtgcagtcaggaaactgacttttttaaaaaagttaattttgatcttaatgtttgattaatttttaaattattgattactgattaatg 19440533  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  19440534 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 19440591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 25184538 - 25184381
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| ||||||||||| |||||||       ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||    
T  25184538 gggagcttctatggtgcagtcagaaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtcgattactgattaatg 25184439  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  25184438 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 25184381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 309
Target Start/End: Original strand, 33816302 - 33816447
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||| |||||||||||||||||       ||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| |||    
T  33816302 gggagcttctacgatgcagtcaggaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgttgattgctgattaatg 33816401  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    || |||| ||||||||||| |||||||||||||| |||| ||||||    
T  33816402 atcaatagtaattcatctagtaatgtttgcaacatcttggacttac 33816447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 55240891 - 55241048
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||| ||||||||||||||| | ||||||||       |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  55240891 gggaacttctacggtgcagttatgaaactgacttttttgaaaaatttaattttaatcttaatgtttgattcatttttaaattgttgattattgattaatg 55240990  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||||||| ||||| ||||| |||||||||||||| |||| ||||||  ||||||||||    
T  55240991 attaatagtaatttatctagtaatgtttgcaacatcttggacttacatgtactatttt 55241048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 164 - 318
Target Start/End: Complemental strand, 23431980 - 23431826
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||| ||||||||| ||||||||       |||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||| |||    
T  23431980 gggagcttctacagtgcagtcatgaaactgacttttttgaaaaagttaattttaattttaatgtttgatgcatttttaaattgttgattactaattaatg 23431881  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactat 318  Q
    || |||| ||||||||||| ||||| |||||||| |||| |||||| ||||||||    
T  23431880 atcaatagtaattcatctactaatgcttgcaacatcttggacttacaggtactat 23431826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 4205409 - 4205252
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| ||||||||       |||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  4205409 gggagcttctacggtgcagtcaagaaactgacttttttgaaaaagttacttttaattttaatgtttgattcatttttaaattattgattacttattcatg 4205310  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| | ||| |||||||| |||| ||||||  ||||||||||    
T  4205309 ataaatagtaattcatctagtgatgcttgcaacatcttggacttacatgtactatttt 4205252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 17272389 - 17272232
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| |||| |||       ||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||| |||    
T  17272389 gggagcttctacggtgcagtcatgaaattgacttatttgaaaaagttaattttaatcttaatgtttgattcatttttaaatcgttcattaccgattaatg 17272290  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  17272289 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 17272232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 19089239 - 19089396
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||||||| |||       || |||||||||||| || |||| | |||||||||||||||||||||||||||||||| |||    
T  19089239 gggagcttctacggtgcagtcaggaaattgacttttttgataaagttaattttgattttaacgattgattcatttttaaattgttgattactgattaatg 19089338  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  19089339 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 19089396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 23761496 - 23761339
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||| | ||||| ||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  23761496 gggagcttattcggtgtagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattattgattactgattaatg 23761397  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||||||||||||||| ||||| |||||||| |||| |||||  ||||| |||||    
T  23761396 atcaataataattcatctagtaatgcttgcaacatcttggacttataggtacaatttt 23761339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 309
Target Start/End: Original strand, 29583986 - 29584131
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| |||| |||       ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||    
T  29583986 gggagcttctacggtgcagtcatgaaattgacttgtttgaaaaagttaattttaatcttaatgtttgattcatttttaaatcgttcattactgattaatg 29584085  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||    
T  29584086 atcaatagtaattcatctagtaatgcttgcaacatcttggacttac 29584131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 165 - 321
Target Start/End: Complemental strand, 37776082 - 37775926
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatga 264  Q
    ||||||||||||||||||||| |||| |||        ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37776082 ggagcttctacggtgcagtcatgaaattgacttttttaaaaaagttaatttcaatcttaatgtttgattcatttttaaattgttgattactgattaatga 37775983  T
Q  265 ttaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    | |||| ||||||||||| ||||| |||||||| |||  ||||||  ||||||||||    
T  37775982 tcaatagtaattcatctagtaatgcttgcaacatcttagacttacatgtactatttt 37775926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 1815687 - 1815569
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||  ||||||||||| |||||||||||||| ||||    
T  1815687 aaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaattgtaattcatctagtaatgtttgcaacatcttg 1815588  T
Q  303 aacttacgggtactatttt 321  Q
     | |||| |||||||||||    
T  1815587 gatttacaggtactatttt 1815569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 170 - 321
Target Start/End: Complemental strand, 39400427 - 39400276
Alignment:
Q  170 ttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaat 269  Q
    ||||||||| |||||| ||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||    
T  39400427 ttctacggtccagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattgctgattaatgatcaat 39400328  T
Q  270 aataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    | | ||||||||| ||||| |||||||| ||||||||||  ||||| |||||    
T  39400327 agtcattcatctagtaatgcttgcaacatcttgaacttaaaggtaccatttt 39400276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 50765106 - 50764988
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||||| |||     
T  50765106 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaacatctta 50765007  T
Q  303 aacttacgggtactatttt 321  Q
     ||||||  ||||||||||    
T  50765006 gacttacatgtactatttt 50764988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 164 - 302
Target Start/End: Complemental strand, 4598407 - 4598269
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| ||||||||        |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  4598407 gggagcttctacggtgcagtcatgaaactgactttttgtaaaatgttaattttaatcttaatgtttgattcatttttaaattgttgattgctgattaatg 4598308  T
Q  264 attaataataattcatctaataatgtttgcaacaccttg 302  Q
    || |||| ||||| ||||||||||| |||||||| ||||    
T  4598307 atcaatagtaattaatctaataatgcttgcaacatcttg 4598269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 32912365 - 32912523
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||| ||||||||||||||||||||||       |||||| || ||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  32912365 gggagcttttacggtgcagtcaggaaactgacttttttgaaaaaattcattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 32912464  T
Q  264 attaataata-attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| || ||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  32912465 atcaatagtatattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 32912523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 37288154 - 37287996
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaa-tcttaatgtttgattcatttttaaattgttgattactgattcat 262  Q
    ||||||||| |||||||||||| |||| |||       ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||    
T  37288154 gggagcttccacggtgcagtcatgaaagtgacttttttgaaaaagttaattttaaatcttaatgtttgattcatttttaaattattgattactgattaat 37288055  T
Q  263 gattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    | | |||| ||||||||||||||||| |||||||| |||| ||||||  ||||||||||    
T  37288054 gctcaatagtaattcatctaataatgcttgcaacatcttggacttacatgtactatttt 37287996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 28002772 - 28002929
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||  |||||||||||||||||       ||||||||||||||| ||||||||||| |||||||||||||||||||||||  ||||| |||    
T  28002772 gggagcttctacactgcagtcaggaaactgacttttttgaaaaagttaattttgatcttaatgttcgattcatttttaaattgttgattgttgattaatg 28002871  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||||| |||||| |||| ||||||  ||||||||||    
T  28002872 atcaatagtaattcatctagtaatgttagcaacatcttggacttacatgtactatttt 28002929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 297
Target Start/End: Original strand, 30002427 - 30002560
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||| | |||| |||       ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  30002427 gggagcttctacggtgcagttatgaaattgacttttctgaaaaagttaattttaatcttaatgtttgattcatttttaaattgtttattactgattaatg 30002526  T
Q  264 attaataataattcatctaataatgtttgcaaca 297  Q
    || |||| ||||||||||| ||||| ||||||||    
T  30002527 atcaatagtaattcatctagtaatgcttgcaaca 30002560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 32579871 - 32579714
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| |||||||||||||| || |||||||       |||||| |||||||| |||||||||||||||| |||||||||||||||||| |||||| |||    
T  32579871 gggagtttctacggtgcagttagaaaactgacttttttgaaaaaattaattttgatcttaatgtttgatttatttttaaattgttgattgctgattaatg 32579772  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| |||||||||||||| |||| ||||||  ||||||||||    
T  32579771 atcaatagtaattcatctagtaatgtttgcaacatcttggacttacatgtactatttt 32579714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 297
Target Start/End: Complemental strand, 47254165 - 47254032
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||| |||||  |||||||       ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  47254165 gggagcttctacggtggagtcatcaaactgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattactgattaatg 47254066  T
Q  264 attaataataattcatctaataatgtttgcaaca 297  Q
    || |||| ||||||||||| ||||| ||||||||    
T  47254065 atcaatagtaattcatctagtaatgcttgcaaca 47254032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 49376392 - 49376235
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| |||    
T  49376392 gggagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgatcttaatgtttaattcatttttaaattcttgattactgattaatg 49376293  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| |||||||| || ||||| || ||||  |||| ||||||  ||||||||||    
T  49376292 atcaatagtaattcatttagtaatgctttcaacttcttggacttacatgtactatttt 49376235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 165 - 321
Target Start/End: Complemental strand, 3043043 - 3042887
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatga 264  Q
    ||||||||||||||||||||| |||| |||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| || |    
T  3043043 ggagcttctacggtgcagtcaagaaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaataa 3042944  T
Q  265 ttaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    | |||| ||||||||||| ||||| ||||||||  ||| ||||||  ||||||||||    
T  3042943 tcaatactaattcatctagtaatgcttgcaacatgttggacttacatgtactatttt 3042887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 7152028 - 7152147
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||||||| |||||| | |||    
T  7152028 gaaaaagttatttttcatcttaatgtttgattcatttttaaattgttgattattgattaatgatcaatagtaattcatctaataatgcttgcaaaatctt 7152127  T
Q  302 gaacttacgggtactatttt 321  Q
    | |||||| |||||||||||    
T  7152128 ggacttacaggtactatttt 7152147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 32592471 - 32592352
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| |||| |||||||| || ||||| || ||||| |||    
T  32592471 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattattgattaacgatcaatagtaattcatttagtaatgctttcaacatctt 32592372  T
Q  302 gaacttacgggtactatttt 321  Q
    |||||||| |||||||||||    
T  32592371 gaacttacaggtactatttt 32592352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 33341784 - 33341666
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| || ||||| ||||    
T  33341784 aaaaaattaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttacaacatcttg 33341685  T
Q  303 aacttacgggtactatttt 321  Q
     ||||||  ||||||||||    
T  33341684 gacttacatgtactatttt 33341666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 166 - 321
Target Start/End: Original strand, 46887946 - 46888101
Alignment:
Q  166 gagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgat 265  Q
    |||||||||||||||| ||||||||||||       ||||||||||||||| || ||||| ||||||||||||||||||||||||||| ||||| |||||    
T  46887946 gagcttctacggtgcaatcaggaaactgacttttttgaaaaagttaattttgattttaatatttgattcatttttaaattgttgattagtgattaatgat 46888045  T
Q  266 taataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
     |||| ||||||||||| ||||| ||| |||| |||| | |||| |||||||||||    
T  46888046 caatagtaattcatctagtaatgcttgtaacatcttggatttacaggtactatttt 46888101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 37663527 - 37663684
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||| ||||||||||| |||        | |||||||||||| || |||| | |||||||||||||||||||||||||||||||| |||    
T  37663527 gggagcttctacggtacagtcaggaaattgacttttttaataaagttaattttgattttaacgattgattcatttttaaattgttgattactgattaatg 37663626  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  37663627 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 37663684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 55477716 - 55477834
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||| ||||| |||||||| ||||    
T  55477716 aaaaaattaattttgatcttaatgtttgattcatttttaaattgttaattactgattaatgattaatagtaattcatctagtaatgcttgcaacatcttg 55477815  T
Q  303 aacttacgggtactatttt 321  Q
     |||||   ||||||||||    
T  55477816 gacttaaatgtactatttt 55477834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 17173715 - 17173558
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| |||||||||||||||| ||||||||       |||||| ||| ||||||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  17173715 gggagtttctacggtgcagtcaagaaactgacttttttgaaaaaattacttttaattttaatgtttgattcatttttaaattattgattacttattcatg 17173616  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| | ||| |||||||| |||  ||||||  ||||||||||    
T  17173615 ataaatagtaattcatctagtgatgcttgcaacatcttagacttacatgtactatttt 17173558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 309
Target Start/End: Original strand, 34947923 - 34948026
Alignment:
Q  206 aagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaac 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||| || |||||||| ||||| |||||||| |||| ||    
T  34947923 aagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaacgatcaatagtatttcatctagtaatgcttgcaacatcttggac 34948022  T
Q  306 ttac 309  Q
    ||||    
T  34948023 ttac 34948026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 35020817 - 35020978
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||| |||||| |||||||        |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||    
T  35020817 gggagcttctacggtgtagtcagaaaactgactcttttaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattaccgattaatg 35020916  T
Q  264 atta----ataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |    ||| ||||||||||| |||||||||||| | |||| |||||| | |||||||||    
T  35020917 atcaatatatagtaattcatctagtaatgtttgcaatatcttggacttacagatactatttt 35020978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 35025391 - 35025509
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||| |||||| ||||| |||| ||||||||||| ||||| |||||||| |||    
T  35025391 gaaaaagttaattttgat-ttaatgtttgattcatttttaaattgttgattgctgattaatgatcaatagtaattcatctagtaatgcttgcaacatctt 35025489  T
Q  302 gaacttacgggtactatttt 321  Q
    | ||||||  ||||||||||    
T  35025490 ggacttacatgtactatttt 35025509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 164 - 297
Target Start/End: Complemental strand, 26896513 - 26896379
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||| |||||||||||||||||||||| |||        |||||||||||||| || |||||||| |||||||||||||||||||||||||||||| |||    
T  26896513 gggaacttctacggtgcagtcaggaaattgacttttttaaaaaagttaattttgattttaatgttcgattcatttttaaattgttgattactgattaatg 26896414  T
Q  264 attaataata-attcatctaataatgtttgcaaca 297  Q
    || |||| || ||||||||| ||||||||||||||    
T  26896413 atcaatagtatattcatctagtaatgtttgcaaca 26896379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 25700842 - 25700999
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| |||||||||||||| |||||| |||       ||||||||||||||| ||||||||||||||||||||||||||||||  |||| ||||| |||    
T  25700842 gggagtttctacggtgcagttaggaaattgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtacattattgattaatg 25700941  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| |||||||||||| |||| |||||| | |||  | |||||| |||||||||    
T  25700942 atcaatagtaattcatctaacaatgcttgcaaaatcttagatttacggatactatttt 25700999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 36493475 - 36493632
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| ||||||||||||||| |||       ||||||||||||| | ||||||||||||||||||||||||||||||| ||||| |||| |||    
T  36493475 gggagcttctatggtgcagtcaggaaattgacttttttgaaaaagttaattatgatcttaatgtttgattcatttttaaattgttaattacggattaatg 36493574  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||| | ||||| |||||| | |||  |||||| | |||||||||    
T  36493575 atcaatagtaattcatcgagtaatgcttgcaatatcttagacttacagatactatttt 36493632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 203 - 297
Target Start/End: Complemental strand, 27397000 - 27396908
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaaca 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| |||| ||||||||||| ||||| ||||||||    
T  27397000 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattac--attaatgatcaatagtaattcatctagtaatgcttgcaaca 27396908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 50697629 - 50697510
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||||||||| ||| ||||| |||| ||||||||||| ||||| || ||||| |||    
T  50697629 gaaaaaattaatttttattttaatgtttgattcatttttaaattgttgattactaattaatgatcaatagtaattcatctagtaatgcttacaacatctt 50697530  T
Q  302 gaacttacgggtactatttt 321  Q
    | | |||| |||||||||||    
T  50697529 ggaattacaggtactatttt 50697510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 17168138 - 17167981
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| |||||||||||||| | ||||||||       |||||| ||| ||||||| ||||||||||||||||||||||||| ||||||||| ||| |||    
T  17168138 gggagtttctacggtgcagtaaagaaactgacttttttgaaaaaattacttttaattttaatgtttgattcatttttaaattattgattactaattaatg 17168039  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| | ||| |||||||| |||  ||||||  ||||||||||    
T  17168038 ataaatagtaattcatctagtgatgcttgcaacatcttagacttacatgtactatttt 17167981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 297
Target Start/End: Original strand, 46883938 - 46884033
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaaca 297  Q
    |||||| |||||||| || ||||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| ||||||||    
T  46883938 gaaaaaattaatttttattttaatgtttgatttatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaaca 46884033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 164 - 282
Target Start/End: Complemental strand, 38012687 - 38012569
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||| ||| |||||||||||||||| |       ||||||||||||||| ||||||||||| |||| |||||||||||||||||| |||||| |||    
T  38012687 gggagcttttacagtgcagtcaggaaactaatttttttgaaaaagttaattttgatcttaatgttcgatttatttttaaattgttgattgctgattaatg 38012588  T
Q  264 attaataataattcatcta 282  Q
    || |||| |||||||||||    
T  38012587 atcaatagtaattcatcta 38012569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 5047752 - 5047909
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||| ||||||||||||||||||| ||       |||||| |||||||| || |||||||| ||||||||||||||||||| |||  |||||  ||    
T  5047752 gggagcttttacggtgcagtcaggaaacagacttttttgaaaaaattaattttgattttaatgttcgattcatttttaaattgtttattgttgattactg 5047851  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||||||||| ||||| |||   |||||||| |||| ||||||  ||||||||||    
T  5047852 atcaataataatttatctagtaaaacttgcaacatcttggacttacatgtactatttt 5047909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 204 - 309
Target Start/End: Complemental strand, 9139612 - 9139509
Alignment:
Q  204 aaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttga 303  Q
    ||||||||||| | |||||||||||||||||||||||||||  | ||||| ||||| ||||| |||| |||||| |||| ||||| |||||||| ||||     
T  9139612 aaaagttaattatgatcttaatgtttgattcatttttaaat--tagattattgattaatgatcaatagtaattcgtctagtaatgcttgcaacatcttgg 9139515  T
Q  304 acttac 309  Q
    ||||||    
T  9139514 acttac 9139509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 309
Target Start/End: Complemental strand, 42200155 - 42200010
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||| |||||||| |||       |||||||||||||| | | || |||||||||| ||||||||||| ||||||||||||| |||    
T  42200155 gggagcttctacggtgcaatcaggaaattgacctttttgaaaaagttaatttgatt-ttgatgtttgattaatttttaaattattgattactgattaatg 42200057  T
Q  264 attaataata-attcatctaataatgtttgcaacaccttgaacttac 309  Q
    |  | || || ||||||||| ||||| |||||||| |||| ||||||    
T  42200056 aacagtagtatattcatctagtaatgcttgcaacatcttggacttac 42200010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 297
Target Start/End: Original strand, 4934040 - 4934132
Alignment:
Q  206 aagttaattttaatcttaatgtttgattcatttttaaa-ttgttgattactgattcatgattaataataattcatctaataatgtttgcaaca 297  Q
    ||||||||||| |||||||||||| ||| ||||||||| || ||||||||||||| ||||||||||  |||||||||| |||||  |||||||    
T  4934040 aagttaattttgatcttaatgtttaatttatttttaaaatttttgattactgattaatgattaatagaaattcatctattaatgcgtgcaaca 4934132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 5299712 - 5299869
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| |||||||||| ||||||||       |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  5299712 gggagcttctatggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttaattcatttttaaattgttgattactgattaatg 5299811  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||||||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  5299812 attaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 5299869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 16446641 - 16446798
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| |||    
T  16446641 gggagcttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgttagattcatttttaaattgttgattactgattaatg 16446740  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  16446741 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 16446798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 35859358 - 35859201
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| |||||||||||||||||||||||||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  35859358 gggagtttctacggtgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 35859259  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| || ||||||||  ||||||||||    
T  35859258 atcaatattaattcatctagtaatgcttgcaacatctcgaacttacaagtactatttt 35859201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 167 - 321
Target Start/End: Complemental strand, 466253 - 466099
Alignment:
Q  167 agcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgatt 266  Q
    ||||||||||||||||||| ||||||||       ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  466253 agcttctacggtgcagtcatgaaactgatttttttgaataagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatc 466154  T
Q  267 aataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    |||| ||||||||||| ||||| |||||||| |||  |||||| |||| ||||||    
T  466153 aatagtaattcatctagtaatgcttgcaacatcttagacttacaggtattatttt 466099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 1149398 - 1149555
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||||||| |||       |||||| |||||||| || |||||||||||||||||||||||||||||||||| |||| |||    
T  1149398 gggagcttctacggtgcagtcaggaaattgacttttttgaaaaaattaattttgattttaatgtttgattcatttttaaattgttgattaccgattaatg 1149497  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  1149498 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 1149555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 37970285 - 37970442
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| ||||||||||||||| |||       ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||    
T  37970285 gggagcttctatggtgcagtcaggaaagtgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgatttctgattaatg 37970384  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || || | ||||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  37970385 atcaacagtaattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 37970442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 38644402 - 38644245
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||| ||||||||||||| ||||||||       |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||    
T  38644402 gggagcttttacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgatttatttttaaatttttgattactgattaatg 38644303  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  38644302 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 38644245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 43643361 - 43643518
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| ||||||||||| |||||||       ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||    
T  43643361 gggagcttctatggtgcagtcagaaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgtcgattactgattaatg 43643460  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  43643461 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 43643518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 34895386 - 34895229
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||| |||||| |||        |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  34895386 gggagcttctacggtgcagttaggaaattgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 34895287  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| |||||||| || ||||| |||||||| |||||||||||  ||||||||||    
T  34895286 atcaatagtaattcatatagtaatgcttgcaacatcttgaacttacatgtactatttt 34895229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 23854235 - 23854354
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||| ||||||||||| ||||| |||||||| |||    
T  23854235 gaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgatttctgattaatgatcaatagtaattcatctagtaatgcttgcaacatctt 23854334  T
Q  302 gaacttacgggtactatttt 321  Q
    | |||||| |||||||||||    
T  23854335 ggacttacaggtactatttt 23854354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 170 - 321
Target Start/End: Original strand, 1953760 - 1953911
Alignment:
Q  170 ttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaat 269  Q
    |||||||||||||||||||||||||       |||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||| ||||| |||    
T  1953760 ttctacggtgcagtcaggaaactgatttttttgaaaaaattaattttgatcttaatgtttgattcattttaaaattgttgattattgattaatgatcaat 1953859  T
Q  270 aataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    | ||||||||||||||||| |||||| | |||| | |||| |||||||||||    
T  1953860 agtaattcatctaataatgcttgcaaaatcttggatttacaggtactatttt 1953911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 297
Target Start/End: Original strand, 7890723 - 7890856
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||| |||| ||||||||       ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||    
T  7890723 gggagcttctacggtgcggtcatgaaactgacttttttgaaaaagttaattttgatcttaatatttgattcatttttaaattgttgattactgattaatg 7890822  T
Q  264 attaataataattcatctaataatgtttgcaaca 297  Q
    || |||| ||||||||||| ||||| ||||||||    
T  7890823 atcaatagtaattcatctagtaatgcttgcaaca 7890856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 35459515 - 35459634
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||| ||||||||||| ||||||||||||||  ||    
T  35459515 gaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgatttctgattaatgatcaatagtaattcatctagtaatgtttgcaacatttt 35459614  T
Q  302 gaacttacgggtactatttt 321  Q
    | |||||| | |||||||||    
T  35459615 ggacttacagatactatttt 35459634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 24823199 - 24823317
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||  |||| ||||||||||| ||||| |||||||| ||||    
T  24823199 aaaaagttaattttaatcttaatgtttgatttatttttaaattgttgattactgattaatgaacaatagtaattcatctagtaatgcttgcaacatcttg 24823298  T
Q  303 aacttacgggtactatttt 321  Q
     ||||||  ||||||||||    
T  24823299 gacttacatgtactatttt 24823317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 167 - 321
Target Start/End: Original strand, 34951826 - 34951980
Alignment:
Q  167 agcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgatt 266  Q
    ||||||||||||||| ||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  34951826 agcttctacggtgcaatcatgaaactgacttttctgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatc 34951925  T
Q  267 aataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    |||| |||||||| || |||   |||||||| |||  ||||||  ||||||||||    
T  34951926 aatagtaattcatgtagtaagacttgcaacatcttagacttacatgtactatttt 34951980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 4132452 - 4132609
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| ||||||||||| |||||||       | ||||||||||||| |||||||||| | ||||||||||||||||||||||||  ||| |||    
T  4132452 gggagcttctatggtgcagtcagcaaactgacttttttggaaaagttaattttgatcttaatgtgtaattcatttttaaattgttgattacaaattaatg 4132551  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  4132552 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 4132609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 44869883 - 44869764
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||| |||| ||||||||||| ||||| |||||| | |||    
T  44869883 gaaaaagttaattttaattttaatgtttgattcatttttaaattgttggttactgattaatgatcaatagtaattcatctagtaatgcttgcaatatctt 44869784  T
Q  302 gaacttacgggtactatttt 321  Q
    | |||||  |||||||||||    
T  44869783 ggacttatcggtactatttt 44869764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 30654349 - 30654506
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| |||||||||||||||||||||||||       ||||||||||||||| || ||||| ||||||||| |||||||||||| |||||||||| |||    
T  30654349 gggagtttctacggtgcagtcaggaaactgatttttttgaaaaagttaattttgattttaatatttgattca-ttttaaattgttaattactgattaatg 30654447  T
Q  264 attaataata-attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || ||||||| |||||| || ||||| |||||||| |||| |||||| |||||||||||    
T  30654448 atcaataatatattcatttagtaatgcttgcaacatcttggacttacaggtactatttt 30654506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 165 - 294
Target Start/End: Complemental strand, 41362845 - 41362716
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatga 264  Q
    |||||||||| |||||||||||||||||||       |||||| |||||||| |||||||||||| |||||||||||||||||||||||||| || ||||    
T  41362845 ggagcttctatggtgcagtcaggaaactgacttttttgaaaaaattaattttgatcttaatgtttaattcatttttaaattgttgattactggttaatga 41362746  T
Q  265 ttaataataattcatctaataatgtttgca 294  Q
    | |||| ||||||||||| |||| ||||||    
T  41362745 tcaatagtaattcatctagtaatttttgca 41362716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 203 - 291
Target Start/End: Complemental strand, 43026059 - 43025971
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgttt 291  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||    
T  43026059 aaaaagttaattttaattttaatgtttgattcatttttaaattgttgatcactgattcatgatcaatagtaatttatctaataatgttt 43025971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 12587968 - 12587849
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||| ||||| |||||| | |||    
T  12587968 gaaaaaattaattttgatcttaatgtttgattcatttttaaattgttaattactgattaatgatcaatagtaattcatctagtaatgcttgcaaaatctt 12587869  T
Q  302 gaacttacgggtactatttt 321  Q
      |||||| |||||||||||    
T  12587868 tgacttacaggtactatttt 12587849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 27082642 - 27082761
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||| ||||| | || ||||||||||| ||||| |||||||| |||    
T  27082642 gaaaaagttaattttgatcttaatgtttaattcatttttaaattgttgattattgattaatgataagtagtaattcatctagtaatgcttgcaacatctt 27082741  T
Q  302 gaacttacgggtactatttt 321  Q
    | ||||||  ||||||||||    
T  27082742 ggacttacatgtactatttt 27082761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 165 - 321
Target Start/End: Original strand, 31933653 - 31933809
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatga 264  Q
    |||||||||| ||||||||  |||||||||       |||||| |||||||| |||||||| |||||||||||||||||| |||||||||||||| ||||    
T  31933653 ggagcttctatggtgcagttgggaaactgacttttttgaaaaaattaattttgatcttaatatttgattcatttttaaatcgttgattactgattaatga 31933752  T
Q  265 ttaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    | |||||||||||||||| |||||| ||||| | |||  ||||||  ||||||||||    
T  31933753 tcaataataattcatctagtaatgtctgcaatatcttagacttacaagtactatttt 31933809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 203 - 297
Target Start/End: Complemental strand, 11727409 - 11727315
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaaca 297  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| ||||||||    
T  11727409 aaaaagttaattttaatcttaataattgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaaca 11727315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 16223248 - 16223130
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||||| |||     
T  16223248 aaaaaattaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaacatctta 16223149  T
Q  303 aacttacgggtactatttt 321  Q
     ||||||  ||||||||||    
T  16223148 gacttacatgtactatttt 16223130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 8803582 - 8803740
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| || |||||||||||||||||| |||       ||||||||||||||| || |||||||||||||||||||||||||||| |||||||||| |||    
T  8803582 gggagtttttacggtgcagtcaggaaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttcattactgattaatg 8803681  T
Q  264 attaataata-attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| || ||||||||  ||||| |||||||| |||| ||||||  ||||||||||    
T  8803682 atcaatagtatattcatctggtaatgcttgcaacatcttggacttacatgtactatttt 8803740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 1205351 - 1205194
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||| |||||| ||| |||        |||||||||||||| |||||  |||||||||||||||||||||| |||||| ||||| |||    
T  1205351 gggagcttctacggtgtagtcagaaaattgacttttttaaaaaagttaattttgatcttgttgtttgattcatttttaaattgctgattagtgattaatg 1205252  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||  |||||||| |||| |||||| |||||||||||    
T  1205251 atcaatagtaattcatctagtaatacttgcaacatcttggacttacaggtactatttt 1205194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 297
Target Start/End: Complemental strand, 33198226 - 33198093
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||| ||| |||| |||       |||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||| |||    
T  33198226 gggagcttctacggtgcaatcatgaaattgacttttttgaaaaagttaatcttaatcttaatgattgattcatttttaaattgttgattattgattaatg 33198127  T
Q  264 attaataataattcatctaataatgtttgcaaca 297  Q
    || |||| ||||||||||| | ||| ||||||||    
T  33198126 atcaatagtaattcatctagtgatgcttgcaaca 33198093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 36694732 - 36694889
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||| |||||| | ||||||||       |||||||||| ||||||| ||||||||||||| ||||||||||| ||||||||| |||||||    
T  36694732 gggagcttctacgatgcagtgaagaaactgatttttttgaaaaagttacttttaattttaatgtttgatttatttttaaattattgattacttattcatg 36694831  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| | ||| |||||||| |||| | ||||  ||||||||||    
T  36694832 ataaatagtaattcatctagtgatgcttgcaacatcttggatttacatgtactatttt 36694889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 40862806 - 40862686
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcattttt-aaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacct 300  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||  |||| ||||||||||| ||||| |||||||| ||    
T  40862806 gaaaaagttacttttaatcttaatgtttgattcattttttaaattgtcgattactgatttatgacaaatagtaattcatctagtaatgcttgcaacatct 40862707  T
Q  301 tgaacttacgggtactatttt 321  Q
    || ||||||  ||||||||||    
T  40862706 tggacttacatgtactatttt 40862686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 6098320 - 6098434
Alignment:
Q  205 aaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaa 304  Q
    |||||||||  | |||||||||||||||||||||||||||||||||||||| ||| ||||| |||| ||||||||||| ||||| |||||||| |||| |    
T  6098320 aaagttaatcatgatcttaatgtttgattcatttttaaattgttgattactaattaatgatcaatagtaattcatctagtaatgcttgcaacatcttgga 6098419  T
Q  305 cttacgggtactatt 319  Q
    |||||  ||||||||    
T  6098420 cttacaagtactatt 6098434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 227 - 321
Target Start/End: Complemental strand, 9864509 - 9864415
Alignment:
Q  227 tttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    |||||||||||||||||||||||||||| |||||||||||| || | ||||||||| ||||| |||||||| ||||||||||| |||||||||||    
T  9864509 tttgattcatttttaaattgttgattaccgattcatgattactagttattcatctagtaatgcttgcaacatcttgaacttacaggtactatttt 9864415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 33906634 - 33906479
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||| |||||||||| |||||||       ||||||||||||||| |||||| | || ||||||||||||||||  ||||| |||||| |||    
T  33906634 gggagcttctacagtgcagtcagaaaactgacttttttgaaaaagttaattttgatcttactattcgattcatttttaaatt--tgattgctgattaatg 33906537  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  33906536 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 33906479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 18259465 - 18259346
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||| |||||||||||| |||||| |||||||||||||||||||||||||||| |||  |||| || ||||||||||||| ||||| |||||||| |||    
T  18259465 gaaaaggttaattttaattttaatgattgattcatttttaaattgttgattactcattactgatcaacaataattcatctagtaatgcttgcaacatctt 18259366  T
Q  302 gaacttacgggtactatttt 321  Q
      ||||||  ||||||||||    
T  18259365 agacttacatgtactatttt 18259346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 12876495 - 12876377
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    ||||||||| ||||||| ||||||||||||| ||||| ||| ||||||||||| ||||||||| |||| ||||||||||| |||||  || |||| ||||    
T  12876495 aaaaagttacttttaattttaatgtttgatttattttcaaactgttgattacttattcatgataaatagtaattcatctagtaatgcctgtaacatcttg 12876396  T
Q  303 aacttacgggtactatttt 321  Q
     ||||||  ||||||||||    
T  12876395 gacttacatgtactatttt 12876377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 297
Target Start/End: Original strand, 39098924 - 39099018
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaaca 297  Q
    ||||| ||||||||||| |||||||||||| |||||||||||| ||||||| | ||| ||||| |||| ||||||||||| ||||| ||||||||    
T  39098924 aaaaaattaattttaattttaatgtttgatgcatttttaaattattgattattaattaatgatcaatagtaattcatctagtaatgcttgcaaca 39099018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 1149756 - 1149843
Alignment:
Q  234 catttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    |||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||||| |||  ||||||  ||||||||||    
T  1149756 catttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaacatcttagacttacaagtactatttt 1149843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 10555010 - 10555127
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaata--ataattcatctaataatgtttgcaacacct 300  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||||   || ||||| ||||   ||||||||||| ||||| |||||| | ||    
T  10555010 aaaaaattaattttgatcttaatgtttgattcatttttaaattgtttattac---ttaatgatcaatagtgtaattcatctagtaatgcttgcaatatct 10555106  T
Q  301 tgaacttacgggtactatttt 321  Q
    || |||||| |||||||||||    
T  10555107 tggacttacaggtactatttt 10555127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 13308003 - 13307931
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcat 236  Q
    ||||||||||| |||||| ||| |||| |||       |||||||||||||||||||||||||||||||||||    
T  13308003 gggagcttctatggtgcaatcatgaaattgactattttgaaaaagttaattttaatcttaatgtttgattcat 13307931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 9864594 - 9864533
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatg 226  Q
    |||||||||| |||||||| ||||||||||       |||||||||||||||||||||||||    
T  9864594 ggagcttctaaggtgcagttaggaaactgacttttttgaaaaagttaattttaatcttaatg 9864533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 13307936 - 13307889
Alignment:
Q  274 attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||||||||  ||||| |||||||| |||||||||||||||||||||||    
T  13307936 attcatcttgtaatgcttgcaacatcttgaacttacgggtactatttt 13307889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 235
Target Start/End: Original strand, 41910863 - 41910895
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattca 235  Q
    ||||||||||||||||||| |||||||||||||    
T  41910863 aaaaagttaattttaatctgaatgtttgattca 41910895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 3e-45; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 38527987 - 38528144
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  38527987 gggagcttctacggtgcagtcaggaaactgatttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 38528086  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  38528087 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacaagtactatttt 38528144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 165 - 321
Target Start/End: Complemental strand, 39573235 - 39573079
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatga 264  Q
    ||||||||||||||||||| | ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39573235 ggagcttctacggtgcagttatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatga 39573136  T
Q  265 ttaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    | |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  39573135 tcaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 39573079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 309
Target Start/End: Complemental strand, 22981218 - 22981073
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| |||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  22981218 gggagcttctatggtgcagtcaggaaactgactttttaaaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatg 22981119  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    || |||||||||||||||| ||||| |||||||| |||| ||||||    
T  22981118 atcaataataattcatctagtaatgattgcaacatcttggacttac 22981073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 35511232 - 35511389
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||||||||||||        |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  35511232 gggagcttctacggtgcagtcaggaaactgacttttttaaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 35511331  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| |||||||| || ||||| |||||||| |||||||||||  ||||||||||    
T  35511332 atcaatagtaattcatatagtaatgcttgcaacatcttgaacttacatgtactatttt 35511389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 309
Target Start/End: Complemental strand, 36867187 - 36867042
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||| ||| |||        ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36867187 gggagcttctacggtgcagtcagaaaattgacttttttaaaaaagttaattttaatcttaatgtttaattcatttttaaattgttgattactgattcatg 36867088  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    ||||||| ||||||||| | |||||||||||||| |||| ||||||    
T  36867087 attaatagtaattcatccagtaatgtttgcaacatcttggacttac 36867042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 309
Target Start/End: Complemental strand, 40133810 - 40133665
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||| ||| |||       |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40133810 gggagcttctacggtgcagtcagaaaattgacttttttgaaaaagttaattttaatcttaatgtttaattcatttttaaattgttgattactgattcatg 40133711  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    ||||||| ||||||||| | ||||| |||||||| |||| ||||||    
T  40133710 attaatagtaattcatccagtaatgcttgcaacatcttggacttac 40133665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 175 - 321
Target Start/End: Original strand, 15992301 - 15992447
Alignment:
Q  175 cggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataa 274  Q
    ||||||||||| ||||||||       ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||| |||    
T  15992301 cggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttaattactgattaatgatcaatagtaa 15992400  T
Q  275 ttcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    |||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  15992401 ttcatctagtaatgcttgcaacatcttggacttaccggtactatttt 15992447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 321
Target Start/End: Original strand, 2888199 - 2888352
Alignment:
Q  168 gcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgatta 267  Q
    ||||||||||||||||||| ||| |||       |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |    
T  2888199 gcttctacggtgcagtcagaaaattgacttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatgatca 2888298  T
Q  268 ataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||| ||||||||||| ||||| ||| |||| |||| |||||| |||||||||||    
T  2888299 atagtaattcatctagtaatgcttgtaacatcttggacttacaggtactatttt 2888352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 22255607 - 22255450
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||| |||||||||||||||        |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  22255607 gggagcttctacggtacagtcaggaaactgactttttttaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 22255508  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||| | |||||||| |||| |||||| |||||||||||    
T  22255507 atcaatagtaattcatctagtaaggcttgcaacatcttggacttacaggtactatttt 22255450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 35934321 - 35934164
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| |||||||||||||| | ||||||||       |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||    
T  35934321 gggagtttctacggtgcagttatgaaactgatttttttgaaaaagttaattttaattttaatgtttgaatcatttttaaattgttgattactgattaatg 35934222  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||||||||||| ||| ||||| |||||||| |||| |||||| |||||||||||    
T  35934221 atcaataataattcaactagtaatgcttgcaacatcttggacttaccggtactatttt 35934164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 297
Target Start/End: Complemental strand, 42343146 - 42343013
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  42343146 gggagcttctacggtgcagtcatgaaactgacttttctgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatg 42343047  T
Q  264 attaataataattcatctaataatgtttgcaaca 297  Q
    || |||  ||||||||||| ||||| ||||||||    
T  42343046 atcaatggtaattcatctagtaatgcttgcaaca 42343013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 22973871 - 22973989
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||||| ||||    
T  22973871 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaacatcttg 22973970  T
Q  303 aacttacgggtactatttt 321  Q
     ||||||  ||||||||||    
T  22973971 gacttacatgtactatttt 22973989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 8437390 - 8437233
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||| |||||| |||||||||||||||||       ||||||||||||||| || ||||| ||| ||||||||||||||||||||||||||||| |||    
T  8437390 gggagcatctacgatgcagtcaggaaactgacttttttgaaaaagttaattttgattttaatatttaattcatttttaaattgttgattactgattaatg 8437291  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| |||||||| ||||| |||| |||||| |||||||||||    
T  8437290 atcaatagtaattcatctagtaatgttttcaacatcttggacttacaggtactatttt 8437233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 14409091 - 14409248
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||||||||||||       |||||| ||||||||||| |||||||| ||||||||||||||||||||||| |||| | |||    
T  14409091 gggagcttctacggtgcagtcaggaaactgatttttttgaaaaatttaattttaattttaatgttcgattcatttttaaattgttgattgctgaataatg 14409190  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| |||||||| || |||||||||||||| |||| ||||||  ||||||||||    
T  14409191 atcaatagtaattcatttagtaatgtttgcaacatcttggacttacaagtactatttt 14409248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 24886512 - 24886355
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||| || |||||||||| ||||||||       ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||    
T  24886512 gggagcttttatggtgcagtcaagaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgatttctgattaatg 24886413  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  24886412 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 24886355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 168 - 297
Target Start/End: Complemental strand, 25669997 - 25669868
Alignment:
Q  168 gcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgatta 267  Q
    |||||||||||||||||| ||||||||       |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |    
T  25669997 gcttctacggtgcagtcatgaaactgatttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatgatca 25669898  T
Q  268 ataataattcatctaataatgtttgcaaca 297  Q
    ||| ||||||||||| ||||| ||||||||    
T  25669897 atagtaattcatctagtaatgcttgcaaca 25669868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 25889795 - 25889638
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||| |||||||||||||||||       | ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||    
T  25889795 gggagcttctacgatgcagtcaggaaactgacttttctggaaaagttaattttgatcttaatgtttaattcatttttaaattgttgattactgattaatg 25889696  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| || ||||| |||| | |||| |||||||||||    
T  25889695 atcaatagtaattcatctagtaatgctttcaacatcttggatttacaggtactatttt 25889638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 309
Target Start/End: Complemental strand, 27330729 - 27330584
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| |||| |||       ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||    
T  27330729 gggagcttctacggtgcagtcatgaaattgacttgtttgaaaaagttaattttaatcttaatgtttgattcatttttaaatcgttcattactgattaatg 27330630  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||    
T  27330629 atcaatagtaattcatctagtaatgcttgcaacatcttggacttac 27330584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 7208653 - 7208771
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||  |||||||| ||||    
T  7208653 aaaaagttaatttttattttaatgtttgattcatttttaaattgttgattactgattaatgatcaataataattcatctagtaatacttgcaacatcttg 7208752  T
Q  303 aacttacgggtactatttt 321  Q
    |||||||  ||||||||||    
T  7208753 aacttacatgtactatttt 7208771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 19120284 - 19120127
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| |||||||||| ||||||||       ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||    
T  19120284 gggagcttctaaggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgatcactgattaatg 19120185  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||  ||||   |||||||||||    
T  19120184 atcaatagtaattcatctagtaatgcttgcaacatcttagactttgaggtactatttt 19120127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 297
Target Start/End: Complemental strand, 22020048 - 22019915
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||| ||||||||||||||||| ||||||||       |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  22020048 gggaacttctacggtgcagtcatgaaactgacttttttgaaaaagttaattttaatcttaatatttgattcatttttaaattgttgattactgattaatg 22019949  T
Q  264 attaataataattcatctaataatgtttgcaaca 297  Q
    || |||| ||||||||||| ||||| || |||||    
T  22019948 atcaatagtaattcatctagtaatgcttacaaca 22019915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 25500676 - 25500833
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| ||||||||       |||||||||||||||||||||| | |||||||||||||||||||||| |||||||||| |||    
T  25500676 gggagcttctacggtgcagtcatgaaactgatttttttgaaaaagttaattttaatcttagtatttgattcatttttaaattgttaattactgattaatg 25500775  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || || | || |||||||| ||||| |||||||| |||  |||||| |||||||||||    
T  25500776 atcaacagtatttcatctagtaatgcttgcaacatcttagacttacaggtactatttt 25500833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 31705362 - 31705519
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| |||||||||||||||| |||| |||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  31705362 gggagattctacggtgcagtcaagaaattgacttttttgaaaaagttaatttttattttaatgtttgattcatttttaaattgttgattactgattaatg 31705461  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| |||||   ||||||||||    
T  31705462 atcaatagtaattcatctagtaatgcttgcaacatcttggacttatatgtactatttt 31705519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 309
Target Start/End: Complemental strand, 36860845 - 36860704
Alignment:
Q  168 gcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgatta 267  Q
    ||||||||||||||||||| ||| |||        |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  36860845 gcttctacggtgcagtcagaaaattgacttttttaaaaaagttaattttaatcttaatgcttgattcatttttaaattgttgattactaattcatgatta 36860746  T
Q  268 ataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    ||| |||||||| || ||||| |||||||| |||| ||||||    
T  36860745 atagtaattcatttagtaatgcttgcaacatcttggacttac 36860704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 165 - 321
Target Start/End: Original strand, 31786397 - 31786553
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatga 264  Q
    |||| ||||| |||||| ||||||||||||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||    
T  31786397 ggagattctatggtgcaatcaggaaactgacttttttgaaaaagttaattttgatattaatgtttgattcatttttaaattgttgattactgattaatga 31786496  T
Q  265 ttaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
      |||| ||||||||||| ||||| |||||||| |||| | |||| |||||||||||    
T  31786497 acaatagtaattcatctagtaatgcttgcaacatcttggatttacaggtactatttt 31786553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 35826275 - 35826393
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||| ||||| |||||||| ||||    
T  35826275 aaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattattgattaatgatcaatagtaattcatctagtaatgcttgcaacatcttg 35826374  T
Q  303 aacttacgggtactatttt 321  Q
     ||||||  ||||||||||    
T  35826375 gacttacatgtactatttt 35826393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 176 - 321
Target Start/End: Complemental strand, 699563 - 699418
Alignment:
Q  176 ggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataat 275  Q
    |||||||||||||||||||       | ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| || || |||| ||||    
T  699563 ggtgcagtcaggaaactgacttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgttaattactgattaataatcaatagtaat 699464  T
Q  276 tcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||||||| ||||| |||||||| |||| |||||| | |||||||||    
T  699463 tcatctagtaatgcttgcaacatcttggacttacagatactatttt 699418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 17157781 - 17157938
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||| |||||| |||| |||       |||||||| || ||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  17157781 gggagcttctacggtacagtcaagaaattgacttttttgaaaaagtcaagtttgattttaatgtttgattcatttttaaattgttgattactgattaatg 17157880  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||||||||||||||| ||||| |||||||| |||| |||||   ||||||||||    
T  17157881 atcaataataattcatctagtaatgcttgcaacatcttggacttaaaagtactatttt 17157938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 26269234 - 26269077
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| |||||||||||||||| ||||||||       ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||    
T  26269234 gggagtttctacggtgcagtcatgaaactgacttttatgaaaaagttaattttaatcttaatgattggttcatttttaaattgttgattactgattaatg 26269135  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || | || ||||| ||||| || || || ||||| ||| ||||||| |||||||||||    
T  26269134 atcagtagtaatttatctagtattgcttacaacatcttaaacttacaggtactatttt 26269077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 28416301 - 28416458
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| ||| ||||       ||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||| |||    
T  28416301 gggagcttctacggtgcagtcatgaagctgacttttttgaaaaagttaattttaatcttaatgtttgattcttttttaaattgttgattgttgattaatg 28416400  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||| | ||||| |||||||| |||| |||||   ||||||||||    
T  28416401 atcaatagtaattcatcaagtaatgcttgcaacatcttggacttaaaagtactatttt 28416458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 33908657 - 33908501
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||| ||||||||||||| || |||||||       ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||    
T  33908657 gggagcatctacggtgcagttagaaaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattgctgattaatg 33908558  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||| ||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  33908557 atcaatagtaatt-atctagtaatgcttgcaacatcttggacttacatgtactatttt 33908501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 8741673 - 8741792
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || |||||||| | ||| ||||||||  ||    
T  8741673 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtatttcatctagtgatgcttgcaacatttt 8741772  T
Q  302 gaacttacgggtactatttt 321  Q
    | ||||||  ||||||||||    
T  8741773 ggacttacatgtactatttt 8741792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 297
Target Start/End: Complemental strand, 9200648 - 9200516
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatga 264  Q
    ||||||||||||||||||||| ||||||||       |||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||||    
T  9200648 ggagcttctacggtgcagtcatgaaactgatttttttgaaaaaattaattttaattttaaattttgattcatttttaaattgttgattactgattaatga 9200549  T
Q  265 ttaataataattcatctaataatgtttgcaaca 297  Q
    | |||| ||||||||||| ||||| ||||||||    
T  9200548 tcaatagtaattcatctagtaatgcttgcaaca 9200516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 309
Target Start/End: Complemental strand, 12910779 - 12910635
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatga 264  Q
    |||||||||| |||||||||||||||||||       | ||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||     
T  12910779 ggagcttctatggtgcagtcaggaaactgacttttttggaaaagttaattatgatcttaatgtttgattcatttttaaattgttgattgctgattaatgt 12910680  T
Q  265 ttaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    | |||| ||||||||||| ||||| |||||||| |||| ||||||    
T  12910679 tcaatagtaattcatctagtaatgcttgcaacatcttggacttac 12910635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 43254280 - 43254156
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| ||||||||||||||| |||       | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  43254280 gggagcttctatggtgcagtcaggaaattgacttttttggaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactgattaatg 43254181  T
Q  264 attaataataattcatctaataatg 288  Q
    || |||| ||||||||||| |||||    
T  43254180 atcaatagtaattcatctagtaatg 43254156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 166 - 321
Target Start/End: Complemental strand, 32563563 - 32563408
Alignment:
Q  166 gagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgat 265  Q
    |||||||||||||||||| | ||||||||       |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| |||||    
T  32563563 gagcttctacggtgcagttatgaaactgacttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttaattgctgattaatgat 32563464  T
Q  266 taataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
     |||||||||| ||||| ||||  |||||||| |||  ||||||  ||||||||||    
T  32563463 caataataatttatctagtaattcttgcaacatcttagacttacatgtactatttt 32563408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 204 - 321
Target Start/End: Complemental strand, 5830278 - 5830160
Alignment:
Q  204 aaaagttaattttaatcttaatgtttgatt-catttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||||| ||||    
T  5830278 aaaagttaattttgattttaatgtttgatttcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaacatcttg 5830179  T
Q  303 aacttacgggtactatttt 321  Q
     ||||||  ||||||||||    
T  5830178 gacttacatgtactatttt 5830160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 203 - 297
Target Start/End: Complemental strand, 7693607 - 7693513
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaaca 297  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||  |||| ||||||||||| ||||| ||||||||    
T  7693607 aaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatgaacaatagtaattcatctagtaatgcttgcaaca 7693513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 30969113 - 30969231
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| ||||||| ||||  ||||| || ||||    
T  30969113 aaaaagttaattttaattttaatgtttgattcatttttaaattgtggattactgattaatgattaatagtaactcatctagtaatacttgcagcatcttg 30969212  T
Q  303 aacttacgggtactatttt 321  Q
    ||||||  | |||||||||    
T  30969213 aacttatagatactatttt 30969231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 308
Target Start/End: Original strand, 27318238 - 27318383
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcattttt-aaattgttgattactgattcat 262  Q
    ||||| ||||| ||||||||||| |||||||        |||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| ||    
T  27318238 gggagtttctatggtgcagtcagaaaactgacttttttaaaaaagttaattttaatcttaatgtttgattcatttttaaaattgttgatttttgattaat 27318337  T
Q  263 gattaataataattcatctaataatgtttgcaacaccttgaactta 308  Q
    ||| |||| |||||||| || |||||||||||||| ||| ||||||    
T  27318338 gatcaatagtaattcatatagtaatgtttgcaacatcttaaactta 27318383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 43308410 - 43308567
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||| | |||||||| ||||||||||       ||||||||||||||| || ||| | |||||||| ||||||||||||||||| |||||| |||    
T  43308410 gggagcttcaatggtgcagttaggaaactgacttttttgaaaaagttaattttgattttagtatttgattcgtttttaaattgttgatttctgattaatg 43308509  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||  |||||| |||||||||||    
T  43308510 atcaatagtaattcatctagtaatgcttgcaacatcttcgacttacaggtactatttt 43308567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 5837942 - 5837823
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||| |||||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||| || | ||||||||||| ||||| |||||||| |||    
T  5837942 gaaaaggttaattttaattttaatgattgattcatttttaaattgttgattattgattaatgatcaacagtaattcatctagtaatgcttgcaacatctt 5837843  T
Q  302 gaacttacgggtactatttt 321  Q
    | |||| | |||||||||||    
T  5837842 ggacttgcaggtactatttt 5837823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 15724875 - 15724756
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||| ||||| || ||| |  ||    
T  15724875 gaaaaagttaattttaactttaatgtttgattcatttttaaattgttgattattgattaatgattaatagtaattcatctagtaatgcttacaatatttt 15724776  T
Q  302 gaacttacgggtactatttt 321  Q
    | ||||||  ||||||||||    
T  15724775 ggacttacaagtactatttt 15724756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 35504752 - 35504633
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||||| |||||| || ||||||||||||||||||||||||||||||||||||||| || || |||| ||||||||||| ||||  |||||||| |||    
T  35504752 gaaaaagtcaattttgattttaatgtttgattcatttttaaattgttgattactgattaataatcaatagtaattcatctagtaatacttgcaacatctt 35504653  T
Q  302 gaacttacgggtactatttt 321  Q
    | ||||||  ||||||||||    
T  35504652 ggacttacatgtactatttt 35504633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 203 - 297
Target Start/End: Complemental strand, 8467112 - 8467018
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaaca 297  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||||||||| ||| ||||| |||| ||||||||||| ||||| ||||||||    
T  8467112 aaaaagttaattttatttttaatgtttgattcatttttaaactgttgattactaattaatgatcaatagtaattcatctagtaatgcttgcaaca 8467018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 23115980 - 23116086
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||| |||||||||| |||||||||| |||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  23115980 gggagtttctacggtgaagtcaggaaaatgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 23116079  T
Q  264 attaata 270  Q
    || ||||    
T  23116080 atcaata 23116086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 258
Target Start/End: Original strand, 23954552 - 23954646
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgat 258  Q
    ||||||||||| |||||||||||||||||||       ||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||    
T  23954552 gggagcttctatggtgcagtcaggaaactgacttttttgaaaaagttaattatgatcttaatgtttaattcatttttaaattgttgattaatgat 23954646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 166 - 321
Target Start/End: Original strand, 13956116 - 13956269
Alignment:
Q  166 gagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgat 265  Q
    ||||||||||||||||||||| || ||||       ||||| ||||||||| || |||||||||||   | ||  ||||||||||||||||||| |||||    
T  13956116 gagcttctacggtgcagtcagaaagctgatttttttgaaaatgttaattttgattttaatgtttgaaaaagtt--aaattgttgattactgattaatgat 13956213  T
Q  266 taataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
     |||| ||||||||||| ||||| |||||||| |||| ||| || |||||||||||    
T  13956214 caatagtaattcatctagtaatgcttgcaacatcttggactaacaggtactatttt 13956269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 302
Target Start/End: Original strand, 21088558 - 21088654
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    ||||| |||| ||||||||||||||||||||||||||||||   ||||||| | |||||||||||||| ||||||||||| ||||| || ||||| ||||    
T  21088558 aaaaaattaactttaatcttaatgtttgattcatttttaaa---ttgattatttattcatgattaatagtaattcatctagtaatgcttacaacatcttg 21088654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 1428983 - 1429069
Alignment:
Q  238 tttaaattgttga---ttactgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    |||||||||||||   ||||||||| ||||| |||| ||||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  1428983 tttaaattgttgaatattactgattaatgatcaatagtaattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 1429069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 14919327 - 14919390
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgat 265  Q
    |||||| |||||||| |||||||||||||||||||||||||||| | |||| |||||| |||||    
T  14919327 gaaaaaattaattttgatcttaatgtttgattcatttttaaattttagatttctgattaatgat 14919390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 11898240 - 11898210
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactga 194  Q
    |||||||||||||||||||||||||||||||    
T  11898240 gggagcttctacggtgcagtcaggaaactga 11898210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 1e-44; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 166 - 321
Target Start/End: Complemental strand, 44914090 - 44913932
Alignment:
Q  166 gagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgat 265  Q
    ||||||||||||||||||||| ||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44914090 gagcttctacggtgcagtcagcaaactggtttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgat 44913991  T
Q  266 taataataattca---tctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||||| |||||||   |||||||||| |||||||| |||| ||||||  ||||||||||    
T  44913990 taatagtaattcattttctaataatgcttgcaacatcttggacttacatgtactatttt 44913932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 309
Target Start/End: Complemental strand, 4167347 - 4167202
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||| ||| |||       |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4167347 gggagcttctacggtgcagtcagaaaattgacttttttgaaaaagttaattttaatcttaatgtttaattcatttttaaattgttgattactgattcatg 4167248  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    ||||||| ||||||||| | ||||| |||||||| |||| ||||||    
T  4167247 attaatagtaattcatccagtaatgcttgcaacatcttggacttac 4167202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 41961265 - 41961108
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||||||||||||       ||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| |||    
T  41961265 gggagcttctacggtgcagtcaggaaactgaattttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattattgattaatg 41961166  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| |||||| |||| ||||||    
T  41961165 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacaggtattatttt 41961108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 164 - 297
Target Start/End: Original strand, 33660155 - 33660288
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||||||| ||||||||       |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  33660155 gggagcttctacggtgcagtcatgaaactgacttttctgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatg 33660254  T
Q  264 attaataataattcatctaataatgtttgcaaca 297  Q
    || |||| ||||||||||| ||||| ||||||||    
T  33660255 atcaatagtaattcatctagtaatgcttgcaaca 33660288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 165 - 309
Target Start/End: Original strand, 43648024 - 43648168
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatga 264  Q
    |||||||||||||||||||||||||| |||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||    
T  43648024 ggagcttctacggtgcagtcaggaaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatga 43648123  T
Q  265 ttaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    | |||| ||||||||||| |||||||||| ||| |||| ||||||    
T  43648124 tcaatagtaattcatctagtaatgtttgcgacatcttggacttac 43648168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 11366158 - 11366316
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||| |||||||||||||||| ||| |||       |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  11366158 gggagcatctacggtgcagtcagaaaattgatttttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattactgattaatg 11366257  T
Q  264 attaataata-attcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| || ||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  11366258 atcaatagtatattcatctagtaatgcttgcaacatcttggacttacaggtactatttt 11366316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 164 - 318
Target Start/End: Original strand, 19424420 - 19424574
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||  |||||||       ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  19424420 gggagcttctacggtgcagtcatcaaactgacttttttgaaaaagttaattttaatcttaatgattgattcatttttaaattgttgattactgattaatg 19424519  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactat 318  Q
    || |||| ||||||||||| ||||| |||||||| |||  |||| | ||||||||    
T  19424520 atcaatagtaattcatctagtaatgcttgcaacatcttagacttgcaggtactat 19424574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 18494059 - 18494216
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||| ||||||| ||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18494059 gggagcttatacggtgtagtcatgaaactgacttttttgaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattaatg 18494158  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || ||||  |||||||||| ||||| || ||||| |||| ||||||  ||||||||||    
T  18494159 atcaatagcaattcatctagtaatgcttacaacatcttggacttacatgtactatttt 18494216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 167 - 321
Target Start/End: Original strand, 39167150 - 39167304
Alignment:
Q  167 agcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgatt 266  Q
    ||||||||| ||||| |||| |||||||       |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  39167150 agcttctactgtgcaatcagaaaactgacttttttgaaaaagttaattttaatcttaatgttttattcatttttaaattgttgattactgattcataatt 39167249  T
Q  267 aataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    |||| ||||||||||| ||||| | ||||||  ||| ||||||  ||||||||||    
T  39167250 aatagtaattcatctagtaatgctagcaacaatttggacttacatgtactatttt 39167304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 2325156 - 2325313
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||| ||| |||        |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||     
T  2325156 gggagcttctacggtgcagtcagaaaattgattttttttaaaaagttaattttgatcttaatgtttgatttatttttaaattgttgattactgattaata 2325255  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| | |||| |||||||||||    
T  2325256 atcaatagtaattcatctagtaatgcttgcaacatcttggatttacaggtactatttt 2325313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 5881916 - 5881797
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||| ||||||||||| ||||| |||||||| |||    
T  5881916 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgaataatgatcaatagtaattcatctagtaatgcttgcaacatctt 5881817  T
Q  302 gaacttacgggtactatttt 321  Q
      ||||||  ||||||||||    
T  5881816 agacttacatgtactatttt 5881797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 7006754 - 7006873
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||||||| ||||| |||||||| |||    
T  7006754 gaaaaagttaattttaatcataatgtttgattcatttttaaattgttgattactgattaatgatcaatagaaattcatctagtaatgcttgcaacatctt 7006853  T
Q  302 gaacttacgggtactatttt 321  Q
    | ||||||  ||||||||||    
T  7006854 ggacttacaagtactatttt 7006873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 169 - 321
Target Start/End: Original strand, 33709015 - 33709167
Alignment:
Q  169 cttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaa 268  Q
    ||||||||||||||||| || |||||       |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| ||    
T  33709015 cttctacggtgcagtcatgatactgaattttttgaaaaagttaattttaattttaatgtttgattcatttttaaattgttgattaatgattaatgatcaa 33709114  T
Q  269 taataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || ||||||||||| ||||| |||||||| |||| | ||||  ||||||||||    
T  33709115 tagtaattcatctagtaatgcttgcaacatcttggatttacaagtactatttt 33709167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 166 - 321
Target Start/End: Complemental strand, 3177362 - 3177207
Alignment:
Q  166 gagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgat 265  Q
    |||||||||||||||||||||||||||||       |||||||||| ||||||| ||||||||||||| ||||| ||||||||||||||| |||||||||    
T  3177362 gagcttctacggtgcagtcaggaaactgacttttttgaaaaagttacttttaattttaatgtttgatttattttcaaattgttgattacttattcatgat 3177263  T
Q  266 taataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
     |||| ||||||||||| ||||| ||| || | |||| ||||||  ||||||||||    
T  3177262 aaatagtaattcatctagtaatgcttgtaatatcttggacttacatgtactatttt 3177207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 19289101 - 19289258
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| |||||||| ||||||||||       ||||||||||||||| |||||||||||| |||||||||||||||||| ||| |||||| |||    
T  19289101 gggagcttctatggtgcagttaggaaactgacttttttgaaaaagttaattttgatcttaatgtttaattcatttttaaattgttaatttctgattaatg 19289200  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||| | |||| |||||| |||| ||||||    
T  19289201 atcaatagtaattcatctagtaatgcttgcaatatcttggacttacaggtattatttt 19289258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 31862277 - 31862120
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| ||||||||| |||||||||       ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||| |||    
T  31862277 gggagcttctatggtgcagtcgggaaactgacttttttgaaaaagttaattttgatcttaatatttgattcatttttaaatcgttgattactgattaatg 31862178  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| |||||| | ||| | |||| ||||||  ||||||||||    
T  31862177 atcaatagtaattcatctagtaatgtctacaatatcttggacttacaagtactatttt 31862120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 43770664 - 43770783
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||  |||||||||| ||||| |||||||| |||    
T  43770664 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgatttctaattaatgatcaatagaaattcatctagtaatgcttgcaacatctt 43770763  T
Q  302 gaacttacgggtactatttt 321  Q
    |||||||  | |||||||||    
T  43770764 gaacttaaagatactatttt 43770783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 4764057 - 4763899
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaa-gttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcat 262  Q
    |||||||||||||||||||| ||||||||||        ||||| ||||||||| || ||||||||||||||||||||||||| ||||||||||||| ||    
T  4764057 gggagcttctacggtgcagtaaggaaactgactttttaaaaaaaagttaattttgattttaatgtttgattcatttttaaattattgattactgattaat 4763958  T
Q  263 gattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||| |||| ||||||| ||| ||||| |||||| | |||| |||||| |||||||||||    
T  4763957 gatcaatagtaattcaactagtaatgcttgcaatatcttggacttacaggtactatttt 4763899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 308
Target Start/End: Complemental strand, 26357963 - 26357858
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||||| ||||    
T  26357963 aaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaacatcttg 26357864  T
Q  303 aactta 308  Q
     |||||    
T  26357863 gactta 26357858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 164 - 302
Target Start/End: Complemental strand, 35959317 - 35959179
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||||||||| |||  ||| |||       ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||    
T  35959317 gggagcttctacggtgcactcaaaaaattgacttttttgaaaaagttaattttgattttaatgtttgattcatttttaaattgttgattactgattaatg 35959218  T
Q  264 attaataataattcatctaataatgtttgcaacaccttg 302  Q
    || |||| ||||||||||| ||||| |||||||| ||||    
T  35959217 atcaatagtaattcatctagtaatgcttgcaacatcttg 35959179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 166 - 321
Target Start/End: Original strand, 41051083 - 41051235
Alignment:
Q  166 gagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgat 265  Q
    |||||||||||||||||||| |||| |||       |||||| ||||||||||| |||||||||||||||||||| |||||||||||| ||||| |||||    
T  41051083 gagcttctacggtgcagtcatgaaaatgatttt---gaaaaaattaattttaattttaatgtttgattcatttttgaattgttgattattgattaatgat 41051179  T
Q  266 taataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
     ||||| ||||||||||  |||| || ||||| ||||||||||| |||||||||||    
T  41051180 caataacaattcatctagcaatgcttacaacatcttgaacttacaggtactatttt 41051235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 19500739 - 19500850
Alignment:
Q  210 taattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttac 309  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||||| |||||| ||||    
T  19500739 taattttgatcttaatatttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaacatcttgaaattac 19500838  T
Q  310 gggtactatttt 321  Q
      ||||||||||    
T  19500839 atgtactatttt 19500850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 41465888 - 41465769
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||||||||| |||||| ||||| |||| |||||||| || |||||||||||||| |||    
T  41465888 gaaaaagttaattttgatcttaatgttcgattcaattttaaattgttgattgctgattaatgatcaatagtaattcatatagtaatgtttgcaacatctt 41465789  T
Q  302 gaacttacgggtactatttt 321  Q
    | ||||||  ||||||||||    
T  41465788 ggacttacatgtactatttt 41465769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 27349731 - 27349883
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    |||||||||||| ||||||||| ||||||||       |||||||||||||||||     || ||||||||||||||||||||||||||||||||| |||    
T  27349731 gggagcttctacagtgcagtcatgaaactgacttttctgaaaaagttaattttaa-----atatttgattcatttttaaattgttgattactgattaatg 27349825  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||  |||||| | |||||||||    
T  27349826 atcaatagtaattcatctagtaatgcttgcaacatcttagacttacagatactatttt 27349883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 13711846 - 13711727
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||| ||||||||||| | |||| ||||||||||||||||| |||||||||||||| ||||| |||| ||||||||||| || ||||||||||| |||    
T  13711846 gaaaaaattaattttaatttaaatgattgattcatttttaaatcgttgattactgattaatgatcaatagtaattcatctagtattgtttgcaacatctt 13711747  T
Q  302 gaacttacgggtactatttt 321  Q
      |||||| |||||||||||    
T  13711746 agacttacaggtactatttt 13711727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 164 - 287
Target Start/End: Original strand, 29241923 - 29242046
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||| |||||||||||||||||||       | ||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||    
T  29241923 gggagcttctatggtgcagtcaggaaactgaactttttggaaaagttaattatgatcttaatgtttgattcatttttaaattgttgattgctgattaatg 29242022  T
Q  264 attaataataattcatctaataat 287  Q
     | |||| ||||||||||| ||||    
T  29242023 ttcaatagtaattcatctagtaat 29242046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 31570551 - 31570669
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    |||||||||||||| || |||||| |||||||||||||||||  ||||||||||||| ||||| |||| |||||||||||  |||| |||||||| |||     
T  31570551 aaaaagttaattttcattttaatgattgattcatttttaaatatttgattactgattaatgatcaatagtaattcatctagcaatgcttgcaacatctta 31570650  T
Q  303 aacttacgggtactatttt 321  Q
    |||||||  ||||||||||    
T  31570651 aacttacaagtactatttt 31570669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 297
Target Start/End: Original strand, 18257354 - 18257449
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaaca 297  Q
    |||||||||||||||||| |||||  || ||||||||| ||||||| ||||||||||| ||||| |||||||||||||||| ||||| ||||||||    
T  18257354 gaaaaagttaattttaatattaataatttattcattttaaaattgtcgattactgattaatgataaataataattcatctagtaatgcttgcaaca 18257449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 203 - 282
Target Start/End: Complemental strand, 33902400 - 33902321
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatcta 282  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||| |||| || || ||||||||||||||||    
T  33902400 aaaaagttaattttgatcttaatgtttgatttatttttaaattgttgattacagattaataatcaataataattcatcta 33902321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 297
Target Start/End: Original strand, 41463407 - 41463501
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaaca 297  Q
    |||||||||||||||||||||||| |||||||||||||||||| || |||| ||||| ||||| |||| ||||| ||||| |||||||| |||||    
T  41463407 aaaaagttaattttaatcttaatgattgattcatttttaaattattaattattgattaatgatcaatagtaatttatctattaatgtttacaaca 41463501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 164 - 251
Target Start/End: Complemental strand, 45328114 - 45328028
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgat 251  Q
    ||||||||||||||||||||||| |||||||       ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45328114 gggagcttctacggtgcagtcag-aaactgacttttttgaaaaagttaattttgatcttaatgtttgattcatttttaaattgttgat 45328028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 33550800 - 33550853
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactg 256  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33550800 aaaaagttaattttgatcttaatgtttgattcatttttaaattgttgattactg 33550853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 37906098 - 37905990
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgatt-catttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacct 300  Q
    |||||| |||||||| || ||||||||||||| ||||||||||||||| |||||||||| ||||| |||| ||||||||| | ||||  |||||||| ||    
T  37906098 gaaaaaattaattttgattttaatgtttgatttcatttttaaattgttaattactgattaatgatcaatagtaattcatccagtaattcttgcaacatct 37905999  T
Q  301 tgaacttac 309  Q
    || ||||||    
T  37905998 tggacttac 37905990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 4478717 - 4478633
Alignment:
Q  237 ttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||||||||||||||||||||||| ||||| ||||  |||||||||| ||||| |||||||| |||| |||||| | |||||||||    
T  4478717 ttttaaattgttgattactgattaatgatcaatagcaattcatctagtaatgcttgcaacatcttggacttaccgatactatttt 4478633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 236 - 321
Target Start/End: Original strand, 4263926 - 4264011
Alignment:
Q  236 tttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    |||||||||||||||||||||||  ||||| |||| || |||||||| ||||| |||||||| ||||||||||   ||||||||||    
T  4263926 tttttaaattgttgattactgatcaatgatcaatattatttcatctagtaatgcttgcaacatcttgaacttatatgtactatttt 4264011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 17053963 - 17054004
Alignment:
Q  218 atcttaatgtttgattcatttttaaattgttgattactgatt 259  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  17053963 atcttaatgtttgattcatttttacattgttgattactgatt 17054004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 17071604 - 17071645
Alignment:
Q  218 atcttaatgtttgattcatttttaaattgttgattactgatt 259  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  17071604 atcttaatgtttgattcatttttacattgttgattactgatt 17071645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 233
Target Start/End: Original strand, 4263726 - 4263756
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgatt 233  Q
    |||||||||||||||||||||||||||||||    
T  4263726 aaaaagttaattttaatcttaatgtttgatt 4263756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 9200179 - 9200215
Alignment:
Q  91 aaatcaatcatcttaaatataatgtccatatacctag 127  Q
    |||| |||| |||||||||||||||||||||||||||    
T  9200179 aaataaatcctcttaaatataatgtccatatacctag 9200215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 36642296 - 36642256
Alignment:
Q  281 taataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    |||||||| |||||||| ||||||||||| |||||||||||    
T  36642296 taataatgcttgcaacatcttgaacttaccggtactatttt 36642256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 44286285 - 44286217
Alignment:
Q  253 actgattcatgattaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    ||||||| ||||| |||| |||||||||||| |||| |||||||| |||  |||||| | |||||||||    
T  44286285 actgattaatgatcaatagtaattcatctaacaatgcttgcaacatcttagacttacagatactatttt 44286217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 85; Significance: 2e-40; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 515 - 415
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||    
T  515 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaatagtaattcatctagtaatgcttgcaacatctt 416  T
Q  302 g 302  Q
    |    
T  415 g 415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 408227 - 408346
Alignment:
Q  202 gaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacacctt 301  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||||| |||||||| |||    
T  408227 gaaaaaattaatttttattttaatgtttgattcatttttaaattgttgattactgattaatgatcaatagtaattcatctagtaatgcttgcaacatctt 408326  T
Q  302 gaacttacgggtactatttt 321  Q
    | ||||||  ||||||||||    
T  408327 ggacttacatgtactatttt 408346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 93900 - 94017
Alignment:
Q  203 aaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatgattaataataattcatctaataatgtttgcaacaccttg 302  Q
    |||||||||||||| || ||||||||||||||||||| ||||||||||||| ||||| ||||| ||||  |||||||||| ||||| |||||||| ||||    
T  93900 aaaaagttaattttgattttaatgtttgattcatttt-aaattgttgattagtgattaatgatcaatagcaattcatctagtaatgcttgcaacatcttg 93998  T
Q  303 aacttacgggtactatttt 321  Q
     ||||||  ||||||||||    
T  93999 gacttacaagtactatttt 94017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 8312 - 8155
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||||||| |||       || |||||||||||| || |||| | |||||||||||||||||||||||||||||||| |||    
T  8312 gggagcttctacggtgcagtcaggaaattgacttttttgataaagttaattttgattttaacgattgattcatttttaaattgttgattactgattaatg 8213  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||||| ||||| |||||||| |||| ||||||  ||||||||||    
T  8212 atcaatagtaattcatctagtaatgcttgcaacatcttggacttacatgtactatttt 8155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 165 - 321
Target Start/End: Complemental strand, 12332 - 12177
Alignment:
Q  165 ggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatga 264  Q
    ||||||||||||||||||||| |||||| |        ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  12332 ggagcttctacggtgcagtcatgaaacttacttttttaaaaaagttaattttaatcttaatgtttgatt-atttttaaattgttgattactgattaatga 12234  T
Q  265 ttaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    | |||| ||||||||||| ||||| |||||||| |||  ||||||  ||||||||||    
T  12233 tcaatagtaattcatctagtaatgcttgcaacatcttagacttacatgtactatttt 12177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 321
Target Start/End: Complemental strand, 44381 - 44224
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||| ||||||||  |||||||       ||||||||| ||||| || ||||||||| ||||||||||||||||||||||||||||| |||    
T  44381 gggagcttctacgatgcagtcaacaaactgacttttttgaaaaagttgattttgattttaatgtttaattcatttttaaattgttgattactgattaatg 44282  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||  | ||||| |||||||| |||| ||||||  ||||||||||    
T  44281 atcaatagtaattcattcagtaatgcttgcaacaacttggacttacatgtactatttt 44224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 321
Target Start/End: Original strand, 154406 - 154563
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||| ||||||||  |||||||       ||||||||| ||||| || ||||||||| ||||||||||||||||||||||||||||| |||    
T  154406 gggagcttctacgatgcagtcaacaaactgacttttttgaaaaagttgattttgattttaatgtttaattcatttttaaattgttgattactgattaatg 154505  T
Q  264 attaataataattcatctaataatgtttgcaacaccttgaacttacgggtactatttt 321  Q
    || |||| ||||||||  | ||||| |||||||| |||| ||||||  ||||||||||    
T  154506 atcaatagtaattcattcagtaatgcttgcaacaacttggacttacatgtactatttt 154563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 164 - 309
Target Start/End: Original strand, 145775 - 145921
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgattcatg 263  Q
    ||||||||||||||||||||||||||| |||       ||||||||||||||| || ||||||||| ||||||||||||||| || |||||||||| |||    
T  145775 gggagcttctacggtgcagtcaggaaattgacttttttgaaaaagttaattttgattttaatgtttaattcatttttaaattttttattactgattaatg 145874  T
Q  264 attaataata-attcatctaataatgtttgcaacaccttgaacttac 309  Q
    || |||  || |||||| || ||||| |||||||| |||| ||||||    
T  145875 atcaattgtatattcatttagtaatgcttgcaacatcttggacttac 145921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 267701 - 267606
Alignment:
Q  164 gggagcttctacggtgcagtcaggaaactgannnnnnngaaaaagttaattttaatcttaatgtttgattcatttttaaattgttgattactgatt 259  Q
    ||||| ||||| |||||||||| ||||||||       |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  267701 gggagattctatggtgcagtcaagaaactgacttttttgaaaaaattaattttgatcttaatatttgattcatttttaaattgttgattactgatt 267606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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