View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17639_high_26 (Length: 317)
Name: NF17639_high_26
Description: NF17639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17639_high_26 |
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Alignment Details
Target: chr2 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 2 - 306
Target Start/End: Original strand, 32828791 - 32829095
Alignment:
| Q |
2 |
aacaacttccttttcctaccactcaattccctctcctccttcacttcaaattccacgttcttacccctcgatcttgacctcaaactccaattcccaccac |
101 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32828791 |
aacaacttccttttcctaccactcaattccctctcctccttcacttcaaattccacgttcttacccctcgatcttgacctcaaactccaattcccaccac |
32828890 |
T |
|
| Q |
102 |
cagaacccccactttctctccctacacctttatcaccctccacactcttcggcactacatcctttcctaacttcaaccgtttcttcttcggtgtgggaga |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32828891 |
cagaacccccactttctctccctacacctttatcaccctccacactcttcggaactacatcctttcctaacttcaaccgtttcttcttcggtgtgggaga |
32828990 |
T |
|
| Q |
202 |
gacatcaagcaaaaccggggcacgcctagcccgcgagcttctcctcacccctgaatcagggttcaaatcatgacccacattacactcaccgtgatttcta |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32828991 |
gacatcaagcaaaaccggggcacgcctagcccgcgagcttctcctcacccctgaatcagggttcaaatcatgacccacattacactcaccgtgatttcta |
32829090 |
T |
|
| Q |
302 |
gtata |
306 |
Q |
| |
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||||| |
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| T |
32829091 |
gtata |
32829095 |
T |
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