View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1763_high_49 (Length: 342)

Name: NF1763_high_49
Description: NF1763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1763_high_49
NF1763_high_49
[»] chr6 (9 HSPs)
chr6 (115-333)||(3949340-3949558)
chr6 (115-338)||(25167844-25168067)
chr6 (210-331)||(4263360-4263481)
chr6 (24-95)||(31110679-31110750)
chr6 (20-95)||(31976355-31976430)
chr6 (210-339)||(10990024-10990153)
chr6 (1-99)||(31952944-31953042)
chr6 (20-91)||(11427725-11427796)
chr6 (20-91)||(32869785-32869856)
[»] chr4 (19 HSPs)
chr4 (115-333)||(37050006-37050225)
chr4 (4-93)||(29977976-29978065)
chr4 (4-91)||(23608326-23608413)
chr4 (4-99)||(29239977-29240072)
chr4 (165-331)||(24239788-24239955)
chr4 (122-289)||(18522202-18522369)
chr4 (4-96)||(50052345-50052437)
chr4 (1-92)||(56300086-56300177)
chr4 (20-97)||(31910299-31910376)
chr4 (20-96)||(50526088-50526164)
chr4 (20-91)||(41236454-41236525)
chr4 (1-97)||(28480184-28480280)
chr4 (1-97)||(28481059-28481155)
chr4 (1-97)||(28481934-28482030)
chr4 (162-328)||(16832082-16832249)
chr4 (20-95)||(41823989-41824064)
chr4 (276-333)||(19852490-19852547)
chr4 (20-93)||(40574886-40574959)
chr4 (1-54)||(47104632-47104685)
[»] chr2 (22 HSPs)
chr2 (115-338)||(37344620-37344843)
chr2 (151-338)||(31092317-31092505)
chr2 (164-338)||(14296202-14296377)
chr2 (218-338)||(18811704-18811824)
chr2 (4-96)||(2533214-2533306)
chr2 (4-95)||(20700906-20700997)
chr2 (4-91)||(28863546-28863633)
chr2 (4-96)||(17823879-17823971)
chr2 (20-96)||(42257300-42257376)
chr2 (4-91)||(7465657-7465744)
chr2 (20-91)||(17473127-17473198)
chr2 (1-91)||(19930742-19930832)
chr2 (38-96)||(40613819-40613877)
chr2 (246-330)||(8413844-8413928)
chr2 (20-95)||(36168943-36169018)
chr2 (210-316)||(18693124-18693230)
chr2 (4-94)||(44152018-44152108)
chr2 (1-73)||(3154231-3154303)
chr2 (20-91)||(13438450-13438521)
chr2 (1-55)||(17819962-17820016)
chr2 (1-98)||(21301415-21301512)
chr2 (4-84)||(33436029-33436109)
[»] chr5 (16 HSPs)
chr5 (115-307)||(32278607-32278794)
chr5 (4-100)||(6259914-6260010)
chr5 (172-338)||(788228-788394)
chr5 (164-338)||(35811131-35811305)
chr5 (206-338)||(36868293-36868425)
chr5 (20-95)||(15409528-15409603)
chr5 (210-332)||(19215389-19215511)
chr5 (4-91)||(18520806-18520893)
chr5 (20-83)||(36732872-36732935)
chr5 (20-94)||(6679805-6679879)
chr5 (24-97)||(26720627-26720700)
chr5 (24-97)||(26990376-26990449)
chr5 (20-91)||(14831921-14831992)
chr5 (153-269)||(37307134-37307251)
chr5 (5-97)||(3921181-3921273)
chr5 (24-96)||(31009099-31009171)
[»] chr7 (16 HSPs)
chr7 (115-280)||(34547939-34548104)
chr7 (242-333)||(19407866-19407957)
chr7 (20-98)||(35522983-35523061)
chr7 (20-96)||(31735984-31736060)
chr7 (20-91)||(19329949-19330020)
chr7 (20-95)||(46033719-46033794)
chr7 (37-96)||(46374741-46374800)
chr7 (1-91)||(4999436-4999526)
chr7 (115-230)||(16099673-16099785)
chr7 (214-330)||(26449531-26449647)
chr7 (20-91)||(8080305-8080376)
chr7 (20-95)||(26296751-26296826)
chr7 (4-94)||(16374743-16374833)
chr7 (13-95)||(41423782-41423864)
chr7 (20-96)||(21234508-21234584)
chr7 (18-94)||(32045942-32046018)
[»] chr1 (18 HSPs)
chr1 (125-326)||(14344068-14344267)
chr1 (151-333)||(13061893-13062076)
chr1 (210-333)||(3374309-3374432)
chr1 (118-203)||(44163661-44163744)
chr1 (20-95)||(32813354-32813429)
chr1 (211-338)||(17114707-17114833)
chr1 (24-98)||(45044475-45044549)
chr1 (204-330)||(50903467-50903593)
chr1 (20-93)||(49811447-49811520)
chr1 (50-97)||(26440861-26440908)
chr1 (20-91)||(27564657-27564728)
chr1 (20-91)||(37649305-37649376)
chr1 (20-95)||(51898601-51898676)
chr1 (1-91)||(41758893-41758983)
chr1 (4-81)||(38632253-38632330)
chr1 (22-91)||(48716204-48716273)
chr1 (274-333)||(41035080-41035139)
chr1 (212-330)||(49491873-49491990)
[»] chr3 (23 HSPs)
chr3 (151-333)||(29346804-29346987)
chr3 (162-333)||(35526503-35526675)
chr3 (1-95)||(25407065-25407159)
chr3 (215-328)||(16893088-16893201)
chr3 (1-104)||(33118759-33118863)
chr3 (218-338)||(51524868-51524988)
chr3 (20-95)||(11347840-11347915)
chr3 (20-99)||(20764829-20764908)
chr3 (37-100)||(26141443-26141506)
chr3 (20-98)||(41189679-41189757)
chr3 (20-98)||(47531972-47532050)
chr3 (1-98)||(24699870-24699966)
chr3 (20-97)||(51419276-51419353)
chr3 (4-96)||(8076484-8076576)
chr3 (4-95)||(14623757-14623848)
chr3 (4-95)||(21746106-21746197)
chr3 (20-91)||(33644307-33644378)
chr3 (20-91)||(36707350-36707421)
chr3 (20-91)||(53982118-53982189)
chr3 (4-98)||(13897970-13898064)
chr3 (4-98)||(35536717-35536811)
chr3 (115-177)||(49106934-49106995)
chr3 (1-98)||(43746427-43746524)
[»] chr8 (19 HSPs)
chr8 (151-333)||(29369109-29369292)
chr8 (215-338)||(27786783-27786906)
chr8 (20-96)||(43414498-43414574)
chr8 (19-96)||(15048098-15048175)
chr8 (4-94)||(5957921-5958011)
chr8 (20-95)||(4854781-4854856)
chr8 (20-91)||(9122292-9122363)
chr8 (20-95)||(37038586-37038661)
chr8 (20-91)||(42710216-42710287)
chr8 (261-335)||(8831264-8831338)
chr8 (4-94)||(25838280-25838370)
chr8 (4-98)||(42354503-42354597)
chr8 (20-92)||(40423864-40423936)
chr8 (4-95)||(8841350-8841441)
chr8 (20-91)||(14548029-14548100)
chr8 (277-338)||(399778-399839)
chr8 (274-338)||(28225768-28225832)
chr8 (274-338)||(36206475-36206539)
chr8 (4-96)||(42221606-42221698)
[»] scaffold1268 (1 HSPs)
scaffold1268 (4-94)||(848-938)
[»] scaffold1267 (1 HSPs)
scaffold1267 (4-94)||(848-938)
[»] scaffold0110 (1 HSPs)
scaffold0110 (25-97)||(8779-8851)
[»] scaffold0531 (1 HSPs)
scaffold0531 (274-333)||(10265-10324)
[»] scaffold0316 (1 HSPs)
scaffold0316 (20-98)||(17210-17288)


Alignment Details
Target: chr6 (Bit Score: 136; Significance: 7e-71; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 115 - 333
Target Start/End: Complemental strand, 3949558 - 3949340
Alignment:
Q  115 tcaaaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgca 213  Q
    ||||||||||||||||||||||| |||||| |||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  3949558 tcaaaagtatgaccattcttggccaaataacgactgaaa-gactactccctctaagaaaatttgaacaaaagtattggtattctcagatattctgttgca 3949460  T
Q  214 attgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcacttt 313  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||| || ||| ||| | ||||||||| |||| ||||||||||| |||||||||||||    
T  3949459 attgaatcaactattctgcatctgtcaaggcggctttggaggtacccttctgaacacgagtcctcattctggctcagttaaaactaaaaagcttcacttt 3949360  T
Q  314 gttcacctgtttcttcttct 333  Q
     |||||||||||||||||||    
T  3949359 attcacctgtttcttcttct 3949340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 115 - 338
Target Start/End: Complemental strand, 25168067 - 25167844
Alignment:
Q  115 tcaaaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgca 213  Q
    |||||||||||||||| |||||| ||| || |||||||| ||||||||| |||| |||||||| ||||||||||||||||||| || || ||||||||||    
T  25168067 tcaaaagtatgaccatacttggccaaacaacgactaaaa-gactactctttctatgaaaatttgaacaaaagtattggtattcccatatattctgttgca 25167969  T
Q  214 attgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcacttt 313  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||| ||||| |||  | ||||| ||||||||||||||||||||||| ||||||||||    
T  25167968 attgaaccaactattctgtatctgtcaaggcggctttggaggtacccttttgggcatgagtcctctttccggctgagttaaaactagaaggcttcacttt 25167869  T
Q  314 gttcacctgtttcttcttctctctc 338  Q
    |||||| ||||||||||||| ||||    
T  25167868 gttcacatgtttcttcttctttctc 25167844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 210 - 331
Target Start/End: Original strand, 4263360 - 4263481
Alignment:
Q  210 tgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttca 309  Q
    |||||||||||||||||||| | ||||  |||| |   |||||| | ||| ||||||||||   ||||||||||||||||||||||||||| | ||||||    
T  4263360 tgcaattgaaccaactattccgtatctgccaagacaattttggaggaacccttttgagcacgggtcctcattccggctgagttaaaactagcaggcttca 4263459  T
Q  310 ctttgttcacctgtttcttctt 331  Q
     |||||| || || ||||||||    
T  4263460 ttttgtttacatgcttcttctt 4263481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 31110750 - 31110679
Alignment:
Q  24 ctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    |||||||||||  |||||||||| ||||||||   |||||| | ||||||||||||||||||||||||||||    
T  31110750 ctcttctctcttcctaatgtatggggtgtacaaaggtgtatggaaataaaggatgtctatgtaacattttcc 31110679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 31976355 - 31976430
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    |||||||||||||||  |||||||||| |||||||| | ||||||  ||||||| | |||||||||||||||||||    
T  31976355 tctcctcttctctcttcctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacattttcc 31976430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 339
Target Start/End: Complemental strand, 10990153 - 10990024
Alignment:
Q  210 tgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttca 309  Q
    ||||| ||||||||||||| || |||| | | ||| |||||||| | ||| ||||| |||| | |||||||| ||||| ||||||| |||||| | ||||    
T  10990153 tgcaaatgaaccaactattttgtatctgttagggcagctttggaggaacccttttgtgcacgagtcctcatttcggctaagttaaagctagaaggattca 10990054  T
Q  310 ctttgttcacctgtttcttcttctctctcg 339  Q
    |||||||| | || | |||||||| |||||    
T  10990053 ctttgttctcttgctgcttcttctttctcg 10990024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 31953042 - 31952944
Alignment:
Q  1 aaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttta 99  Q
    ||||||||||| |||| ||||| |||||||||||  ||| || ||| |||||| | |  |||||  ||||||| | |||||||||||||||||||||||    
T  31953042 aaacacactttctctttcatcttctcttctctcttcctagtgcatggggtgtagaaggatgtatgagaataaatggtgtctatgtaacattttccttta 31952944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 11427725 - 11427796
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||||  |||||| ||| |||||||| | ||||||  ||||||||| |||||||||| ||||    
T  11427725 tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 11427796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 32869785 - 32869856
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||||  |||||| ||| |||||||| |  ||||| |||||||||| |||||||||| ||||    
T  32869785 tctcctcttctctcttcctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 32869856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 115 - 333
Target Start/End: Complemental strand, 37050225 - 37050006
Alignment:
Q  115 tcaaaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgca 213  Q
    |||||||||||||||| |||||| ||| || |||||||| |||||||||||||| |||||||| ||||||||||||||||||| || || ||||||||||    
T  37050225 tcaaaagtatgaccatacttggccaaacaacgactaaaa-gactactctctctatgaaaatttgaacaaaagtattggtattcccatatattctgttgca 37050127  T
Q  214 attgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaa-gcttcactt 312  Q
    ||||||||||||||| || |||| |||| ||||||||||| ||||| ||||| |||| | |||||||||||||||||||||||||||||| |||||||||    
T  37050126 attgaaccaactattttgtatctctcaaagcggctttggaggtacccttttgggcacgagtcctcattccggctgagttaaaactagaaaggcttcactt 37050027  T
Q  313 tgttcacctgtttcttcttct 333  Q
    ||||||| |||||||||||||    
T  37050026 tgttcacatgtttcttcttct 37050006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 29977976 - 29978065
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatttt 93  Q
    |||||||| |||| ||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||| |||||||||||||||    
T  29977976 cacactttctctttcatcttctcttttctctcactaatgtatggggtgtacaagtgtgtataggaataaaagatatctatgtaacatttt 29978065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 23608326 - 23608413
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||| ||||  ||||||||||||||||  |||||| ||||||||||||||  ||||| ||||||||||||||||||||| ||||    
T  23608326 cacactttctcttttatctcctcttctctcttcctaatgcatgaggtgtacagggatgtatgggaataaaggatgtctatgtatcatt 23608413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 29239977 - 29240072
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttta 99  Q
    |||||||| |||| | |||||||||||||||  ||| || ||| |||||||| | |||||| |||||||||| |||||||||||||||||||||||    
T  29239977 cacactttctctttcctctcctcttctctcttcctagtgcatggggtgtacaagagtgtatgggaataaagggtgtctatgtaacattttccttta 29240072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 331
Target Start/End: Original strand, 24239788 - 24239955
Alignment:
Q  165 tctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattt 263  Q
    |||| |||||||| ||||||||||||| ||||| | | | |||| ||| |||||| ||||||||| || ||||  ||||   ||||| || ||||| |||    
T  24239788 tctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgccaagatagcttttgaggtacccttt 24239887  T
Q  264 tgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttctt 331  Q
    || ||||   |||||||||||||||||||||| |||| | |||||||||| |||||||  ||||||||    
T  24239888 tgggcacgggtcctcattccggctgagttaaagctagtaggcttcactttattcacctacttcttctt 24239955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 289
Target Start/End: Original strand, 18522202 - 18522369
Alignment:
Q  122 tatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaac 220  Q
    |||||||||||||||| ||| |||  |||| | |||||  ||||||| |||||||| ||||||||||||  ||||| |  || ||||| ||||| |||||    
T  18522202 tatgaccattcttggccaaacaaaagctaata-gactatactctctatgaaaatttgaacaaaagtattcatattcccgaatattctgctgcaactgaac 18522300  T
Q  221 caactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctga 289  Q
    ||||||||||  ||||  |||| || ||||||| | | | ||||||||||  |||||||||||||||||    
T  18522301 caactattctatatctgccaagtcgactttggaggcatccttttgagcacggatcctcattccggctga 18522369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 50052437 - 50052345
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 96  Q
    |||||||| |||| | |||||||||||||||  ||| || || |||||||||   |||||| |||||||||| ||||||||||||||||||||    
T  50052437 cacactttctctttcctctcctcttctctcttcctagtgcataaggtgtacaaaggtgtatgggaataaagggtgtctatgtaacattttcct 50052345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 56300177 - 56300086
Alignment:
Q  1 aaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattt 92  Q
    ||||||||||| |||| | |||||||||||||||  |||||||||||| |||||| |  |||||  |||||||| ||||||| |||||||||    
T  56300177 aaacacactttctctttcctctcctcttctctctttctaatgtatgagatgtacaagattgtatgagaataaagaatgtctacgtaacattt 56300086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 31910299 - 31910376
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 97  Q
    |||| ||||||||||  |||||||||| | |||||| | |||||| |||||||| | |||||||||||||||||||||    
T  31910299 tctcatcttctctcttcctaatgtatgggatgtacaagagtgtatgggaataaatggtgtctatgtaacattttcctt 31910376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 50526164 - 50526088
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 96  Q
    |||||||||||||||  ||| || ||| |||||||| | |||||||| |||||||| ||| ||||||||||||||||    
T  50526164 tctcctcttctctcttcctagtgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcct 50526088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 41236454 - 41236525
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||| ||||    
T  41236454 tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 41236525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 28480280 - 28480184
Alignment:
Q  1 aaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 97  Q
    ||||||||||| || | |||||||||||||||||  ||| || ||||| |||||| |  |||||    ||||||| |||||||||||||||||||||    
T  28480280 aaacacactttctccttcatctcctcttctctcttcctagtgcatgagttgtacaaggatgtattcttataaagggtgtctatgtaacattttcctt 28480184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 28481155 - 28481059
Alignment:
Q  1 aaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 97  Q
    ||||||||||| || | |||||||||||||||||  ||| || ||||| |||||| |  |||||    ||||||| |||||||||||||||||||||    
T  28481155 aaacacactttctccttcatctcctcttctctcttcctagtgcatgagttgtacaaggatgtattcttataaagggtgtctatgtaacattttcctt 28481059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 28482030 - 28481934
Alignment:
Q  1 aaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 97  Q
    ||||||||||| || | |||||||||||||||||  ||| || ||||| |||||| |  |||||    ||||||| |||||||||||||||||||||    
T  28482030 aaacacactttctccttcatctcctcttctctcttcctagtgcatgagttgtacaaggatgtattcttataaagggtgtctatgtaacattttcctt 28481934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 328
Target Start/End: Original strand, 16832082 - 16832249
Alignment:
Q  162 ctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctttggaagtacca 260  Q
    ||||||| |||||||| |  |||||||||| |||||  || | ||||| ||||| |||||| |||||| || ||||  |||| | |||||||| | |||     
T  16832082 ctctctatgaaaatttgagtaaaagtattgatattcctagctattctgatgcaaatgaaccgactattatgtatctgccaagacagctttggaggcaccc 16832181  T
Q  261 ttttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttctt 328  Q
    |||||| |||   ||||||||||  ||||||||||  ||| | |||||||||||||||| || |||||    
T  16832182 ttttgaacacgtgtcctcattccaactgagttaaagttagtaggcttcactttgttcacatgcttctt 16832249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 41823989 - 41824064
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    |||| ||||||||||  |||||| ||||||||||||   ||||||  ||||||| | |||||||||||||||||||    
T  41823989 tctcttcttctctcttcctaatgcatgaggtgtacaaaggtgtatgagaataaatggtgtctatgtaacattttcc 41824064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 19852547 - 19852490
Alignment:
Q  276 ctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttct 333  Q
    |||||||||| |||||||||||||| | || ||||||||| ||| || ||||||||||    
T  19852547 ctcattccgggtgagttaaaactagcaggcctcactttgtgcacgtgcttcttcttct 19852490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 40574886 - 40574959
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatttt 93  Q
    |||||||||||||||  ||||| |||| |||||||| | ||||||  ||||||| | ||||||| |||||||||    
T  40574886 tctcctcttctctcttcctaatatatggggtgtacaagggtgtatgagaataaaaggtgtctatctaacatttt 40574959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47104632 - 47104685
Alignment:
Q  1 aaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtac 54  Q
    ||||||||||| |||| |||||||||||||||||   ||||| |||||||||||    
T  47104632 aaacacactttctctttcatctcctcttctctcttcttaatgcatgaggtgtac 47104685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 9e-55; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 115 - 338
Target Start/End: Complemental strand, 37344843 - 37344620
Alignment:
Q  115 tcaaaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgca 213  Q
    |||| |||||||||||||||||| ||| || ||||| || ||||||||||| ||||||||||| ||||||| ||||||||||| ||||| || || ||||    
T  37344843 tcaagagtatgaccattcttggccaaacaacgactagaa-gactactctctataagaaaatttgaacaaaaatattggtattcccagatattatgctgca 37344745  T
Q  214 attgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcacttt 313  Q
    | |||| |||||||| || || | ||||||||||||||||  |||| ||||| |||| ||||||||||||||||||||||||||||||| | ||||||||    
T  37344744 aatgaatcaactattatgtatatgtcaaggcggctttggagatacccttttgggcacgaatcctcattccggctgagttaaaactagaatgattcacttt 37344645  T
Q  314 gttcacctgtttcttcttctctctc 338  Q
    |||||||||||||||||||| ||||    
T  37344644 gttcacctgtttcttcttctttctc 37344620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 151 - 338
Target Start/End: Complemental strand, 31092505 - 31092317
Alignment:
Q  151 aaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctt 249  Q
    |||||||||| ||||||| |||||||| |||||||| ||||   ||| | ||| ||||  ||||| || ||||||||||||| ||||  |||| || |||    
T  31092505 aaaagactaccctctctatgaaaatttgaacaaaagcattgacgttcccggatattctaatgcaaatggaccaactattctgtatctggcaagacgactt 31092406  T
Q  250 tggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctctctc 338  Q
    |||| ||||| ||||| |||| | |||||||||||||||||||||| |||||| || ||||||| ||||| || |||||||||| ||||    
T  31092405 tggaggtacccttttgggcacgagtcctcattccggctgagttaaatctagaaggcatcactttattcacgtgattcttcttctttctc 31092317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 164 - 338
Target Start/End: Original strand, 14296202 - 14296377
Alignment:
Q  164 ctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccatt 262  Q
    ||||| |||||||| ||||||||||||  ||||| ||  | |||| |||||||||||||||||||| || ||||  ||||||  ||||||| ||||| ||    
T  14296202 ctctacgaaaatttgaacaaaagtatttatattcccacttattctattgcaattgaaccaactattatgtatctgccaaggcatctttggaggtaccctt 14296301  T
Q  263 ttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctctctc 338  Q
    |||  ||| | | |||||||||||||||||||| |||| | |||||| |||||||| ||| |||||||||| ||||    
T  14296302 ttggacacgagtgctcattccggctgagttaaagctagtaggcttcattttgttcatctgcttcttcttctttctc 14296377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 338
Target Start/End: Original strand, 18811704 - 18811824
Alignment:
Q  218 aaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttc 317  Q
    |||||||||||||| |||| ||||||  |||||||| |  || ||||| ||||   |||||||||||||||||||||| ||| ||||||||||||| | |    
T  18811704 aaccaactattctgtatctgtcaaggtagctttggaggagcccttttgggcacgggtcctcattccggctgagttaaagctataaagcttcactttatgc 18811803  T
Q  318 acctgtttcttcttctctctc 338  Q
    ||||| |||||||||| ||||    
T  18811804 acctgcttcttcttctttctc 18811824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 2533214 - 2533306
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 96  Q
    |||||||||||||  ||||||||||||||||  | |||||||| |||||||| | |||||| |||||||||| ||| ||| ||||||||||||    
T  2533214 cacactttttcttttatctcctcttctctcttcccaatgtatggggtgtacaagggtgtatgggaataaagggtgtatatataacattttcct 2533306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 20700906 - 20700997
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    |||||||| |||| | |||||||||||||||  ||| || ||| |||||||| | |||||| |||||||||| |||||||||||||||||||    
T  20700906 cacactttctctttcctctcctcttctctcttcctagtgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacattttcc 20700997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 28863546 - 28863633
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||| ||||  ||||||||||||||||  |||||| |||||||||||| | |||||| |||||||||| |||||||||| ||||    
T  28863546 cacactttctcttttatctcctcttctctcttcctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 28863633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 17823879 - 17823971
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 96  Q
    |||||||| |||| |||||| ||||||||||  | ||| |||| |||||||| | ||||||   |||||||||||||||||||||||||||||    
T  17823879 cacactttctctttcatctcatcttctctcttccaaatatatggggtgtacaagggtgtatgtaaataaaggatgtctatgtaacattttcct 17823971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 42257300 - 42257376
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 96  Q
    ||||||||||| |||  |||||||||| |||||||| | |||||||| |||||||| ||||||||||| ||||||||    
T  42257300 tctcctcttctttcttcctaatgtatggggtgtacaagagtgtatagaaataaagggtgtctatgtaatattttcct 42257376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 7465744 - 7465657
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||| ||||  ||||| ||||||||||  |||||| |||||||||||| | |||||| |||||||||| |||||||||| ||||    
T  7465744 cacactttctcttttatctcttcttctctcttcctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 7465657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 17473127 - 17473198
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||||  |||||| |||||||||||| | |||||| |||||||||| |||||||||| ||||    
T  17473127 tctcctcttctctcttcctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 17473198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 19930832 - 19930742
Alignment:
Q  1 aaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    ||||||||||| ||||   |||||||||||||||  |||||| |||||||||||| | |||||| |||||||| | |||||||||| ||||    
T  19930832 aaacacactttctcttttctctcctcttctctcttcctaatgcatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcatt 19930742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 40613877 - 40613819
Alignment:
Q  38 taatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 96  Q
    ||||||||| |||||||| | |||||| |||||||||| ||||||||||||||||||||    
T  40613877 taatgtatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacattttcct 40613819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 330
Target Start/End: Original strand, 8413844 - 8413928
Alignment:
Q  246 gctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttct 330  Q
    |||||||| ||||| ||||||||||   |||||||||||| |||||| || |||| | |||||||||||||| |||| |||||||    
T  8413844 gctttggaggtacccttttgagcacgggtcctcattccggttgagttgaagctagtaggcttcactttgttcgcctgcttcttct 8413928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 36168943 - 36169018
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    |||||| ||||||||  |||||||||| |||||||| | ||||||  ||||||||| ||| |||||||||||||||    
T  36168943 tctcctattctctcttcctaatgtatggggtgtacaagagtgtatgagaataaagggtgtttatgtaacattttcc 36169018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 316
Target Start/End: Complemental strand, 18693230 - 18693124
Alignment:
Q  210 tgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttca 309  Q
    ||||||||||||||||||| || |||| ||||| |  ||||||| | ||| ||||  |||||  |||||||||||||| ||||||| |||| |  |||||    
T  18693230 tgcaattgaaccaactattttgtatctgtcaagacaactttggaggaacccttttaggcacaggtcctcattccggcttagttaaagctagcagacttca 18693131  T
Q  310 ctttgtt 316  Q
    |||||||    
T  18693130 ctttgtt 18693124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 44152018 - 44152108
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 94  Q
    |||||||| |||| |||||||||||||||||  |||||| ||||| | |||| | ||||||  ||||||| | ||| ||||||||||||||    
T  44152018 cacactttctctttcatctcctcttctctcttcctaatgcatgagatatacaagggtgtatgcgaataaaaggtgtttatgtaacattttc 44152108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3154231 - 3154303
Alignment:
Q  1 aaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaa 73  Q
    ||||||| ||| |||| ||||||||||| ||||||||||||| | | ||| |||| |||| ||||||||||||    
T  3154231 aaacacagtttctctttcatctcctcttttctctcactaatgcacggggtatacaagtgtctataggaataaa 3154303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 13438450 - 13438521
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||||  |||||| ||| |||||||| |  ||||| |||||||||| |||||||||| ||||    
T  13438450 tctcctcttctctcttcctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 13438521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17820016 - 17819962
Alignment:
Q  1 aaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtaca 55  Q
    ||||||| ||| |||| |||||||||||||||||  |||||| ||||||||||||    
T  17820016 aaacacattttctctttcatctcctcttctctcttcctaatgcatgaggtgtaca 17819962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 21301512 - 21301415
Alignment:
Q  1 aaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 98  Q
    ||||||||||| ||||  |||| ||||||| |||  ||| || |||||||||||| | |||||| | |||||||| ||| ||| ||||||||| ||||    
T  21301512 aaacacactttctcttttatcttctcttctttcttcctagtgcatgaggtgtacatgagtgtatggaaataaagggtgtgtatctaacatttttcttt 21301415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 33436109 - 33436029
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatg 84  Q
    |||||||| |||| | |||| ||||||||||  |||||| |||||||||||| | ||||||  ||||||| | ||||||||    
T  33436109 cacactttctctttcctctcatcttctctcttcctaatgcatgaggtgtacaagggtgtatgagaataaaaggtgtctatg 33436029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 5e-41; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 115 - 307
Target Start/End: Original strand, 32278607 - 32278794
Alignment:
Q  115 tcaaaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgca 213  Q
    ||||||||||||||||||||||| ||| || |||||||| ||||||||||||||||||||||  | |||     |||||||||||| || || |||||||    
T  32278607 tcaaaagtatgaccattcttggccaaacaacgactaaaa-gactactctctctaagaaaattagagcaa-----ttggtattctcatatattttgttgca 32278700  T
Q  214 attgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagctt 307  Q
    |||||||| ||||||||| |||| |||||||||||||||| ||||| ||||| | || |||| |||||||||||||||||||||||||| ||||    
T  32278701 attgaacccactattctgtatctgtcaaggcggctttggaggtacccttttgggaacgaatcttcattccggctgagttaaaactagaaggctt 32278794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 6260010 - 6259914
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctttaa 100  Q
    |||||||| |||| ||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  6260010 cacactttctctttcatctcctcttctctctcactaatgtatgggatgtacaagtgtgtataggaataaaggatatctatgtaacattttcctttaa 6259914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 172 - 338
Target Start/End: Original strand, 788228 - 788394
Alignment:
Q  172 aaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcac 270  Q
    |||||| ||||||||| ||||||||||| ||| |||||||||||||||||||| ||||||  || | |||||||||||||||| | ||| ||||| ||||    
T  788228 aaatttgaacaaaagt-ttggtattctccgatattctgttgcaattgaaccaattattctatatatgtcaaggcggctttggaggaacccttttgggcac 788326  T
Q  271 aaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctctctc 338  Q
     | |||||||  || ||||||||||  ||||| |||||| |||||||| ||| |||||||||| ||||    
T  788327 gagtcctcatagcgtctgagttaaagttagaaggcttcattttgttcatctgcttcttcttctttctc 788394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 164 - 338
Target Start/End: Complemental strand, 35811305 - 35811131
Alignment:
Q  164 ctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccatt 262  Q
    ||||| |||||||| ||||||||||||||||||| || || || |||||||||||||||||||||| |  || | ||||||| ||||||| | |||||||    
T  35811305 ctctatgaaaatttgaacaaaagtattggtattcccaaatattatgttgcaattgaaccaactattttatatttgtcaaggc-gctttggtaataccatt 35811207  T
Q  263 ttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctctctc 338  Q
    |||  ||| | ||||||||||  |||| |||||  |||||  ||| ||||| |||||||| |||||||||| ||||    
T  35811206 ttggacacgagtcctcattccaactgaattaaagttagaacactttactttattcacctgcttcttcttctatctc 35811131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 338
Target Start/End: Complemental strand, 36868425 - 36868293
Alignment:
Q  206 ctgttgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagc 305  Q
    |||||||  |||||||||||||| || |||| ||||||  |||||||| | ||| |||||  |||    ||||||||||||||||||||| |||||| ||    
T  36868425 ctgttgcctttgaaccaactattatgtatctgtcaaggtagctttggaggaacccttttggacacgggccctcattccggctgagttaaagctagaaggc 36868326  T
Q  306 ttcactttgttcacctgtttcttcttctctctc 338  Q
    |||||||| ||||| || |||||||||| ||||    
T  36868325 ttcactttattcacttgcttcttcttctttctc 36868293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 15409603 - 15409528
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    |||||||||||||||  |||||||||| |||||||| | ||||||  ||||||||| ||| |||||||||||||||    
T  15409603 tctcctcttctctcttcctaatgtatggggtgtacaagggtgtatgcgaataaagggtgtttatgtaacattttcc 15409528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 210 - 332
Target Start/End: Complemental strand, 19215511 - 19215389
Alignment:
Q  210 tgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttca 309  Q
    |||||||  ||||||||||||| ||||  |||||| | |||| | ||||| ||||| || |   ||||||||| |||||||||||| |||||  || |||    
T  19215511 tgcaattcgaccaactattctgtatctgccaaggcagttttgaaggtacccttttgggctcgggtcctcattcgggctgagttaaagctagacggcatca 19215412  T
Q  310 ctttgttcacctgtttcttcttc 332  Q
    ||||||||||||| |||||||||    
T  19215411 ctttgttcacctgcttcttcttc 19215389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 18520893 - 18520806
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||| ||||  ||||||||||||||||  |||||| |||||||||||| | ||||||   |||||||| |||||||||| ||||    
T  18520893 cacactttctcttttatctcctcttctctcttcctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtctatgtatcatt 18520806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 36732935 - 36732872
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctat 83  Q
    |||||||||||||||  |||||| |||||||||||| | |||||| |||||||||| |||||||    
T  36732935 tctcctcttctctcttcctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctat 36732872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 6679805 - 6679879
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 94  Q
    |||||||||||||||  |||||||||  |||||||| | ||||||   |||||| ||||||||||||||||||||    
T  6679805 tctcctcttctctcttcctaatgtatagggtgtacaagggtgtatgacaataaatgatgtctatgtaacattttc 6679879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 26720627 - 26720700
Alignment:
Q  24 ctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 97  Q
    |||||||||||  |||||||||| |||||||  | ||||||  ||||||| ||||||||| |||||||||||||    
T  26720627 ctcttctctcttcctaatgtatggggtgtactagggtgtatgagaataaatgatgtctatataacattttcctt 26720700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 26990376 - 26990449
Alignment:
Q  24 ctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 97  Q
    |||||||||||  |||||||||| |||||||  | ||||||  ||||||| ||||||||| |||||||||||||    
T  26990376 ctcttctctcttcctaatgtatggggtgtactagggtgtatgagaataaatgatgtctatataacattttcctt 26990449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 14831921 - 14831992
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||||  |||||| ||| |||||||| |  ||||| |||||||||| |||||||||| ||||    
T  14831921 tctcctcttctctcttcctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 14831992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 269
Target Start/End: Original strand, 37307134 - 37307251
Alignment:
Q  153 aagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctttg 251  Q
    |||||||| ||||||  |||||||| ||||||||||||| ||||  ||| | |||| ||| |||||||||||||||| || ||||  |||| | |||||     
T  37307134 aagactacactctctgtgaaaatttgaacaaaagtattgatatttccagttattcttttgtaattgaaccaactattatgtatctgccaagacagcttta 37307233  T
Q  252 gaagtaccattttgagca 269  Q
     | ||||| |||||||||    
T  37307234 aaggtacccttttgagca 37307251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 3921273 - 3921181
Alignment:
Q  5 acactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 97  Q
    ||||||| |||| | ||| |||||||||||  ||||| |||| |||||||| | ||||||   | |||| | |||||||||||||||||||||    
T  3921273 acactttctctttcttcttctcttctctcttcctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcctt 3921181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 31009099 - 31009171
Alignment:
Q  24 ctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 96  Q
    |||||||||||  ||| || ||| ||||||||   ||||||  ||||||||| ||||||||||||||||||||    
T  31009099 ctcttctctcttcctagtgcatggggtgtacaaaggtgtatgagaataaagggtgtctatgtaacattttcct 31009171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 7e-37; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 115 - 280
Target Start/End: Complemental strand, 34548104 - 34547939
Alignment:
Q  115 tcaaaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgca 213  Q
    |||||||||||||||||||||||  || || |||||||| |||||||||||||| ||||||||  |||||||||||||||||||||||| ||||||||||    
T  34548104 tcaaaagtatgaccattcttggcctaacaacgactaaaa-gactactctctctatgaaaatttgcacaaaagtattggtattctcagatattctgttgca 34548006  T
Q  214 attgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcat 280  Q
     ||||||||||||||||| |||   ||| | || |||||| ||||| |||||||||||| |||||||    
T  34548005 cttgaaccaactattctgtatcggccaaagaggttttggaggtacccttttgagcacaagtcctcat 34547939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 333
Target Start/End: Original strand, 19407866 - 19407957
Alignment:
Q  242 ggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttct 333  Q
    |||||||||||| ||||| ||||| ||||   |||||||||||||||||||||| |||||| |  |||||||||||||||| ||||||||||    
T  19407866 ggcggctttggaggtacccttttgggcacgggtcctcattccggctgagttaaagctagaaggaatcactttgttcacctgcttcttcttct 19407957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 35522983 - 35523061
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 98  Q
    |||| ||||||||||  |||||||||| |||||||| | |||||| |||||||| | ||| ||||||||||||||||||    
T  35522983 tctcttcttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaatggtgtttatgtaacattttccttt 35523061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 31735984 - 31736060
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 96  Q
    |||||||||||||||  |||||||||| |||||||| | |||||| |||||||| | | ||||| ||||||||||||    
T  31735984 tctcctcttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaaaggtatctatctaacattttcct 31736060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 19329949 - 19330020
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||| ||||    
T  19329949 tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 19330020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 46033794 - 46033719
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    ||||||||||||| |  |||||||||| |||||||| | ||||||  ||||||| | |||||||||||||||||||    
T  46033794 tctcctcttctctattcctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacattttcc 46033719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 46374800 - 46374741
Alignment:
Q  37 ctaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 96  Q
    |||||||||| |||||||| | |||||| |||||||| | ||||||||||||||||||||    
T  46374800 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacattttcct 46374741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4999526 - 4999436
Alignment:
Q  1 aaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    ||||||||||| ||||  ||||||||||||||||  |||||| ||| |||||||| | ||||||  ||||||| | |||||||||| ||||    
T  4999526 aaacacactttctcttttatctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcatt 4999436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 16099785 - 16099673
Alignment:
Q  115 tcaaaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctc-agatttctgttgca 213  Q
    |||||||||||||| ||||| || ||| || |||||||| ||| |||||||  ||||| |||| ||||||| |||| |||||| | | |||| |||||||    
T  16099785 tcaaaagtatgacctttcttagcaaaacaacgactaaaa-gaccactctct--aagaatatttgaacaaaaatatttgtattccctatattt-tgttgca 16099690  T
Q  214 attgaaccaactattct 230  Q
    |||||||||||||||||    
T  16099689 attgaaccaactattct 16099673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 330
Target Start/End: Original strand, 26449531 - 26449647
Alignment:
Q  214 attgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcacttt 313  Q
    |||||||||||||||  | || | || |||| | |||||| ||||| |||||  ||| | ||||||||||||||||| | || |||| | |||||||| |    
T  26449531 attgaaccaactatttggtatatgtcgaggcagttttggaggtacccttttggacacgagtcctcattccggctgagctgaagctagtaggcttcactct 26449630  T
Q  314 gttcacctgtttcttct 330  Q
    ||||||||| |||||||    
T  26449631 gttcacctgcttcttct 26449647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 8080376 - 8080305
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||||  ||| || ||| |||||||| | |||||| |||||||||| |||||||||| ||||    
T  8080376 tctcctcttctctcttcctattgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 8080305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 26296751 - 26296826
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    |||||||||||||||   |||||||||||||||||| | |||||| | |||| | | |||||| ||||||||||||    
T  26296751 tctcctcttctctcttcttaatgtatgaggtgtacaagggtgtatggaaatatatggtgtctacgtaacattttcc 26296826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 16374833 - 16374743
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 94  Q
    ||||| || |||| |||||| | ||||||||  ||||||||||  |||||||   ||||||  ||||||||| ||||||||||||||||||    
T  16374833 cacacattctctttcatctctttttctctcttcctaatgtatggagtgtacaaaggtgtatgagaataaagggtgtctatgtaacattttc 16374743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 41423782 - 41423864
Alignment:
Q  13 tcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    |||| |||||||||||||||||  ||| || ||| ||||||||   ||||||  ||||||||| ||| |||||||||||||||    
T  41423782 tctttcatctcctcttctctcttcctagtgcatggggtgtacaaaggtgtatgagaataaagggtgtttatgtaacattttcc 41423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 21234508 - 21234584
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 96  Q
    |||||| | ||||||  |||||||||| ||||||||   ||||||  ||||||| | ||||||||||||||||||||    
T  21234508 tctcctttcctctcttcctaatgtatggggtgtacaatggtgtatgagaataaaaggtgtctatgtaacattttcct 21234584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 32045942 - 32046018
Alignment:
Q  18 catctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 94  Q
    |||||| ||||||||||  | ||| |||||| |||||| | ||||||   ||||||| |||||||||||||||||||    
T  32045942 catctcatcttctctctttcaaatatatgagatgtacaagggtgtatgtaaataaagaatgtctatgtaacattttc 32046018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 125 - 326
Target Start/End: Complemental strand, 14344267 - 14344068
Alignment:
Q  125 gaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaa 223  Q
    ||||||||||||| ||| || |||||||| ||| ||||||||||| |||| || ||||||||||||| ||||| ||||| || | |||||||||| ||||    
T  14344267 gaccattcttggccaaacaacgactaaaa-gaccactctctctaaaaaaaattgaacaaaagtattgatattcccagatattttattgcaattga-ccaa 14344170  T
Q  224 ctattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgt 323  Q
    ||||  || |||| ||||| || ||||||| ||||| |||||  ||| | || ||||||||  |||||||||||||||| ||||||||||||||||||||    
T  14344169 ctata-tgtatctgtcaagtcgactttggaggtacccttttggacacgagtcatcattccgattgagttaaaactagaaggcttcactttgttcacctgt 14344071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 333
Target Start/End: Original strand, 13061893 - 13062076
Alignment:
Q  151 aaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagattt-ctgttgcaattgaaccaactattctgcatctatcaaggcggctt 249  Q
    |||||||||| ||||||| |||||||| ||||||||||||   |||| ||  | | || ||||||||| ||||| ||||||| || | ||||||||||||    
T  13061893 aaaagactaccctctctatgaaaatttgaacaaaagtattaacattcccatctatacttttgcaattggaccaattattctgtatttgtcaaggcggctt 13061992  T
Q  250 tggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttct 333  Q
    |||| ||||  |||| |||||   |||||||| ||||||||||||| ||| || || |||||||||||||||| ||||||||||    
T  13061993 tggaggtactcttttcagcacgggtcctcatttcggctgagttaaagctaaaaggcatcactttgttcacctgcttcttcttct 13062076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 210 - 333
Target Start/End: Complemental strand, 3374432 - 3374309
Alignment:
Q  210 tgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttca 309  Q
    ||||||| |||||||||||||| | ||  |||||| ||||||||  |||| ||||| |||||  |||||||||||||||||||||| ||||   ||||||    
T  3374432 tgcaattaaaccaactattctgtagcttccaaggcagctttggagctacccttttgggcacatgtcctcattccggctgagttaaatctagccggcttca 3374333  T
Q  310 ctttgttcacctgtttcttcttct 333  Q
    |||||||||| || ||||||||||    
T  3374332 ctttgttcacttgcttcttcttct 3374309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 44163661 - 44163744
Alignment:
Q  118 aaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat 203  Q
    |||||||||||||||||||| ||| || |||||||||  ||||||||||||||||||| | | ||||||||||||||||| |||||    
T  44163661 aaagtatgaccattcttggccaaacaacgactaaaaa--ctactctctctaagaaaatatgatcaaaagtattggtattcccagat 44163744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 32813354 - 32813429
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    |||||||||||||||  |||||||||| |||||||| | |||||| |||||||| | |||||||||||||||||||    
T  32813354 tctcctcttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacattttcc 32813429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 338
Target Start/End: Original strand, 17114707 - 17114833
Alignment:
Q  211 gcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcac 310  Q
    ||||||||||||||||||||  | ||  |||||| |||||||| ||||| |||||  ||    ||||||||| ||| |||||||| |||| | |||||||    
T  17114707 gcaattgaaccaactattctatagctg-caaggccgctttggaggtacccttttggacatgggtcctcattctggcagagttaaagctagcaggcttcac 17114805  T
Q  311 tttgttcacctgtttcttcttctctctc 338  Q
    ||||||||| ||||||||||||| ||||    
T  17114806 tttgttcacatgtttcttcttctttctc 17114833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 45044549 - 45044475
Alignment:
Q  24 ctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 98  Q
    |||||||||||  |||||||||| |||||||| | ||||||  ||||||| |||||||| |||||||||||||||    
T  45044549 ctcttctctcttcctaatgtatggggtgtacaagggtgtatgagaataaatgatgtctacgtaacattttccttt 45044475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 330
Target Start/End: Original strand, 50903467 - 50903593
Alignment:
Q  204 ttctgttgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaa 303  Q
    |||| ||||||| |||||||||| || | || |  |||| |||||||||| |||||  |||| ||||   |||||||| |||||||||| || |||| |     
T  50903467 ttctcttgcaatggaaccaactaatcggtatatgccaagtcggctttggaggtaccgctttgggcacgggtcctcatttcggctgagttgaagctagtag 50903566  T
Q  304 gcttcactttgttcacctgtttcttct 330  Q
    ||||||||||||||||||| |||||||    
T  50903567 gcttcactttgttcacctgcttcttct 50903593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 49811520 - 49811447
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatttt 93  Q
    |||||||||||||||  |||||||||| |||| ||| | ||||||  ||||||||| |||||||||||||||||    
T  49811520 tctcctcttctctcttcctaatgtatgtggtgcacaagggtgtatgagaataaagggtgtctatgtaacatttt 49811447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 26440861 - 26440908
Alignment:
Q  50 tgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 97  Q
    |||||| | ||||||||||||||||||||| |||||||||||||||||    
T  26440861 tgtacaagggtgtataggaataaaggatgtttatgtaacattttcctt 26440908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 27564728 - 27564657
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||| ||||    
T  27564728 tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 27564657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 37649305 - 37649376
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||| ||||    
T  37649305 tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 37649376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 51898676 - 51898601
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    |||||||||||||||  ||| || ||| |||||||| | |||||||| |||||||| ||| |||||||||||||||    
T  51898676 tctcctcttctctcttcctagtgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcc 51898601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 41758893 - 41758983
Alignment:
Q  1 aaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    ||||||||||| ||||   |||||||||||||||  |||||| ||| |||||||| | ||||||  ||||||||| |||||||||| ||||    
T  41758893 aaacacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 41758983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 38632330 - 38632253
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtct 81  Q
    |||||||||||||   |||||||||||||||  |||||| ||| |||||||| | |||||| |||||||||| |||||    
T  38632330 cacactttttcttttctctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtct 38632253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 48716273 - 48716204
Alignment:
Q  22 tcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||  |||||| ||| |||||||| | |||||| |||||||||| |||||||||| ||||    
T  48716273 tcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 48716204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 333
Target Start/End: Original strand, 41035080 - 41035139
Alignment:
Q  274 tcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttct 333  Q
    |||||||||||||||||||||| |||||| ||||||   | |||||||| ||||||||||    
T  41035080 tcctcattccggctgagttaaagctagaaggcttcaaaatattcacctgcttcttcttct 41035139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 330
Target Start/End: Original strand, 49491873 - 49491990
Alignment:
Q  212 caattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcact 311  Q
    |||||||||||||||||| | ||    ||||||  ||||||| ||||| ||||| ||||   ||||||||||||||||||| || |||| | || |||||    
T  49491873 caattgaaccaactattcggtatacgccaaggcaactttggaggtacccttttgggcacgggtcctcattccggctgagttgaagctagtaggc-tcact 49491971  T
Q  312 ttgttcacctgtttcttct 330  Q
    |||||||| || |||||||    
T  49491972 ttgttcacatgcttcttct 49491990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 6e-28; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 151 - 333
Target Start/End: Complemental strand, 29346987 - 29346804
Alignment:
Q  151 aaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagattt-ctgttgcaattgaaccaactattctgcatctatcaaggcggctt 249  Q
    |||||||| | ||||||| |||||||| |||||||||||||  |||||||  | | || ||||||||| |||||||||| || |||| ||||||||||||    
T  29346987 aaaagactgccctctctatgaaaattttaacaaaagtattgacattctcatctatactcttgcaattggaccaactattatgtatctgtcaaggcggctt 29346888  T
Q  250 tggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttct 333  Q
    |||| ||||  ||||| ||||   |||||||||||||| ||||||| ||| || || |||| ||||||||||| ||||||||||    
T  29346887 tggaggtactcttttgtgcacgggtcctcattccggctaagttaaagctataaggcatcacgttgttcacctgcttcttcttct 29346804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 333
Target Start/End: Original strand, 35526503 - 35526675
Alignment:
Q  162 ctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctttggaagtacca 260  Q
    ||||||| |||||||| ||||||||||||   |||| ||||| |||| ||||||||| ||||| |||| || ||||  |||| || |||||   |||||     
T  35526503 ctctctatgaaaatttgaacaaaagtattaacattcccagatattctattgcaattgcaccaattattttgaatctgccaagacgtctttgttggtaccc 35526602  T
Q  261 ttttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttct 333  Q
    ||||| ||||   ||||||||||||| |||||||| |||||| || |||||||||||||||| ||||||||||    
T  35526603 ttttgggcacgggtcctcattccggccgagttaaagctagaaggcatcactttgttcacctgcttcttcttct 35526675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25407159 - 25407065
Alignment:
Q  1 aaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    ||||||||||| |||| |||||||||||||||||||||||||||| ||||||| |  | | |||| ||||||||| || |||| |||||||||||    
T  25407159 aaacacactttctctttcatctcctcttctctctcactaatgtataaggtgtataaatatatataagaataaagggtgactatataacattttcc 25407065  T

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Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 16893201 - 16893088
Alignment:
Q  215 ttgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttg 314  Q
    ||||||||||||||| | || |  |||||| |||||||| | ||| ||||||||||   ||||||||||||||||||| || |||| | |||||||||||    
T  16893201 ttgaaccaactattcggtatatggcaaggcagctttggaggcacccttttgagcacgggtcctcattccggctgagttgaacctagtaggcttcactttg 16893102  T
Q  315 ttcacctgtttctt 328  Q
    |||||||| |||||    
T  16893101 ttcacctgcttctt 16893088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 33118863 - 33118759
Alignment:
Q  1 aaacacactttttcttgcatctcctc-ttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttta 99  Q
    ||||||||||| |||| | ||||||| ||||||||| ||| || ||| |||||||| | |||||| | |||||||| |||||| ||||||||||||| ||    
T  33118863 aaacacactttctctttcctctcctccttctctctccctagtgcatggggtgtacaagggtgtatggaaataaagggtgtctacgtaacattttcctata 33118764  T
Q  100 attaa 104  Q
    |||||    
T  33118763 attaa 33118759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 338
Target Start/End: Complemental strand, 51524988 - 51524868
Alignment:
Q  218 aaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttc 317  Q
    ||||||||||| ||||||| ||||||  |||||||| |  || ||||| ||||   |||||||||||||||||||||| ||| || || ||||||| | |    
T  51524988 aaccaactattttgcatctgtcaaggtagctttggaggagcccttttgggcacgggtcctcattccggctgagttaaagctataaggcctcactttatgc 51524889  T
Q  318 acctgtttcttcttctctctc 338  Q
    ||||| |||||||||| ||||    
T  51524888 acctgcttcttcttctttctc 51524868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 11347915 - 11347840
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    |||||||||||||||  |||||||||| |||||| | | |||||| |||||||||| |||||||||| ||||||||    
T  11347915 tctcctcttctctcttcctaatgtatggggtgtataagggtgtatgggaataaagggtgtctatgtaccattttcc 11347840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 20764908 - 20764829
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttta 99  Q
    |||| ||||||||||  |||||||||| |||||||| | ||||||  ||||||| | |||||||||||||||||||||||    
T  20764908 tctcatcttctctcttcctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacattttccttta 20764829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 26141506 - 26141443
Alignment:
Q  37 ctaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctttaa 100  Q
    |||||||||| |||||||| | |||||| | |||||||| ||||||||||||||||||||||||    
T  26141506 ctaatgtatggggtgtacaagagtgtatggaaataaagggtgtctatgtaacattttcctttaa 26141443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 41189757 - 41189679
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 98  Q
    ||||||||||| |||  ||||||||||  ||||||| | |||||| | |||||||| ||||||||||||||||||||||    
T  41189757 tctcctcttctttcttcctaatgtatggagtgtacaagagtgtatggaaataaagggtgtctatgtaacattttccttt 41189679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 47531972 - 47532050
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 98  Q
    |||||| ||||||||  ||||||||||   |||||| |||||||| |||||||||| ||| ||||||||||||||||||    
T  47531972 tctcctattctctcttcctaatgtatggaatgtacaagtgtgtatgggaataaagggtgtttatgtaacattttccttt 47532050  T

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Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 24699966 - 24699870
Alignment:
Q  1 aaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 98  Q
    ||||||||||| |||| | |||||||||||||||  ||| | ||||||||||| | |  |||||  ||||||| ||||||||||||||||||||||||    
T  24699966 aaacacactttctctttcctctcctcttctctcttcctagtttatgaggtgtataaga-tgtatgagaataaaagatgtctatgtaacattttccttt 24699870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 51419353 - 51419276
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 97  Q
    |||||| ||||||||  |||||||||| |||||||| | |||||| | |||||| | ||| |||||||||||||||||    
T  51419353 tctcctattctctcttcctaatgtatggggtgtacaagggtgtatggaaataaaaggtgtttatgtaacattttcctt 51419276  T

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Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 8076484 - 8076576
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 96  Q
    |||||||| |||| | |||||||||||||||  ||| || ||| ||||||||   ||||||  ||||||| | ||||||||||||||||||||    
T  8076484 cacactttctctttcctctcctcttctctcttcctagtgcatggggtgtacaaaagtgtatgagaataaatggtgtctatgtaacattttcct 8076576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 14623848 - 14623757
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    |||||||| |||| ||||| |||||||||||  ||| || |||||||||| | |  |||||  ||||||| | |||||||||||||||||||    
T  14623848 cacactttctctttcatcttctcttctctctttctagtgcatgaggtgtagaaggatgtatgagaataaatggtgtctatgtaacattttcc 14623757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 21746197 - 21746106
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    |||||||| |||| |||||| ||||||||||  | ||| ||||||||||||| | ||||||   |||||| |||||| |||||| |||||||    
T  21746197 cacactttctctttcatctcatcttctctcttccaaatatatgaggtgtacaagggtgtatgtaaataaatgatgtccatgtaatattttcc 21746106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 33644307 - 33644378
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||||  |||||| ||| |||||| | | |||||| |||||||||| |||||||||| ||||    
T  33644307 tctcctcttctctcttcctaatgcatggggtgtataagggtgtatgggaataaagggtgtctatgtatcatt 33644378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 36707421 - 36707350
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||||  |||||| |||||||||||| |  ||||| |||||||| | |||||||||| ||||    
T  36707421 tctcctcttctctcttcctaatgcatgaggtgtacaagaatgtatgggaataaaaggtgtctatgtatcatt 36707350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 53982118 - 53982189
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||||  |||||| ||| |||||||| |  ||||| |||||||||| |||||||||| ||||    
T  53982118 tctcctcttctctcttcctaatgcatggggtgtacaaggttgtatgggaataaagggtgtctatgtatcatt 53982189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 13898064 - 13897970
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 98  Q
    |||||||| |||| ||||| |||||||||||| ||| |||||| |||||| |   ||||||  ||||||| | ||||||| ||||||||| ||||    
T  13898064 cacactttctctttcatcttctcttctctctccctagtgtatggggtgtagaaaagtgtatgagaataaatggtgtctatctaacatttttcttt 13897970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 35536717 - 35536811
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 98  Q
    |||||||  |||| ||||| |||||||||||  ||| || ||| |||||| | | ||||||  ||||||| | ||||||||||||||||||||||    
T  35536717 cacacttcctctttcatcttctcttctctcttcctagtgcatggggtgtagaagggtgtatgagaataaatggtgtctatgtaacattttccttt 35536811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 49106934 - 49106995
Alignment:
Q  115 tcaaaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaattt 177  Q
    ||||||||||||||||||||||   || || |||||||| |||||||||||||| ||||||||    
T  49106934 tcaaaagtatgaccattcttggtctaacaacgactaaaa-gactactctctctatgaaaattt 49106995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 43746427 - 43746524
Alignment:
Q  1 aaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 98  Q
    ||||||| ||| |||| ||||||||||||| |||  ||| || |||||||||||| | ||||||   || ||||| ||| ||||||||||||| ||||    
T  43746427 aaacacaatttctctttcatctcctcttctttcttcctagtgcatgaggtgtacaagggtgtatgacaacaaagggtgtttatgtaacatttttcttt 43746524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 333
Target Start/End: Complemental strand, 29369292 - 29369109
Alignment:
Q  151 aaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctt 249  Q
    |||||||||| ||||||| |||||||| |||||||| ||||  |||||| ||| ||||  |||||||| ||||||||||||| ||||  |||||||| ||    
T  29369292 aaaagactaccctctctatgaaaatttgaacaaaagcattgacattctcggatattctaatgcaattggaccaactattctgtatctgccaaggcggatt 29369193  T
Q  250 tggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttct 333  Q
    |||| ||| | ||||| ||||   ||||||||| |||| ||||||| || ||| || ||||||| ||||| || ||||||||||    
T  29369192 tggatgtatccttttgggcacgggtcctcattctggctcagttaaagcttgaaggcatcactttattcacgtgcttcttcttct 29369109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 215 - 338
Target Start/End: Original strand, 27786783 - 27786906
Alignment:
Q  215 ttgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttg 314  Q
    |||||||||||||| || |||| ||||||  |||||||| | ||||||||| ||||   |||||||||||||||||||||| |||||| ||||||||||     
T  27786783 ttgaaccaactattttgtatctgtcaaggtagctttggaggaaccattttgggcacggctcctcattccggctgagttaaagctagaaggcttcacttta 27786882  T
Q  315 ttcacctgtttcttcttctctctc 338  Q
    |||| ||| || ||||||| ||||    
T  27786883 ttcatctgcttattcttctttctc 27786906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 43414574 - 43414498
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 96  Q
    |||||||||||||||  |||||||||| |||||||| | |||||| | |||||||| ||||||||||||||||||||    
T  43414574 tctcctcttctctcttcctaatgtatggggtgtacaagggtgtatggcaataaagggtgtctatgtaacattttcct 43414498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 15048175 - 15048098
Alignment:
Q  19 atctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 96  Q
    ||||||||||||||||  |||||||||| | |||||| | |||||| |||||||||| ||||||| ||||||||||||    
T  15048175 atctcctcttctctcttcctaatgtatgggatgtacaagggtgtatcggaataaagggtgtctatataacattttcct 15048098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 5957921 - 5958011
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 94  Q
    |||||||| |||| | |||||||||||||||  ||| || |||||||||||| | ||||||  ||||||||| ||| ||||||||||||||    
T  5957921 cacactttctctttcctctcctcttctctcttcctagtgcatgaggtgtacaagggtgtatgagaataaagggtgtttatgtaacattttc 5958011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 4854856 - 4854781
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    ||||||||||||||| ||||||||||| | |||||| | || |||  ||||||||  |||||||||||||||||||    
T  4854856 tctcctcttctctcttactaatgtatgggatgtacaagggtatatgagaataaagagtgtctatgtaacattttcc 4854781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 9122292 - 9122363
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||||  |||||| ||| |||||||| | |||||| ||||||||| ||||||||||| ||||    
T  9122292 tctcctcttctctcttcctaatgcatggggtgtacaagagtgtatgggaataaagaatgtctatgtatcatt 9122363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 37038586 - 37038661
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    |||||||||||||||  ||| || ||| |||||||| | |||||||| |||||||| ||| |||||||||||||||    
T  37038586 tctcctcttctctcttcctagtgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcc 37038661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 42710287 - 42710216
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||||  |||||||||| |||||||| | |||||| |||||||||| ||||| |||| ||||    
T  42710287 tctcctcttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtctgtgtatcatt 42710216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 335
Target Start/End: Original strand, 8831264 - 8831338
Alignment:
Q  261 ttttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctct 335  Q
    ||||||||||   |||||||||||||||||||||| |||| | || ||||||||||||  || ||||||||||||    
T  8831264 ttttgagcacgggtcctcattccggctgagttaaagctagcaggcctcactttgttcatgtgcttcttcttctct 8831338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 25838280 - 25838370
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 94  Q
    |||||||||||||   ||||||||||||| |  |||||||||  |||||||| |  ||||| | |||||||||| ||||||||||||||||    
T  25838280 cacactttttcttttctctcctcttctcttttgctaatgtatagggtgtacaaggttgtatggcaataaaggatatctatgtaacattttc 25838370  T

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Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 42354597 - 42354503
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 98  Q
    |||||||| |||| ||||| |||||||||||  ||| || ||| |||||| | | ||||||  ||||||| | ||||||||||||||||||||||    
T  42354597 cacactttctctttcatcttctcttctctcttcctagtgcatggggtgtagaagggtgtatgagaataaatggtgtctatgtaacattttccttt 42354503  T

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Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 40423936 - 40423864
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattt 92  Q
    |||||||||||||||  |||||  |||||||||||| | |||||| |||||||| | |||||||||| |||||    
T  40423936 tctcctcttctctcttcctaatacatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcattt 40423864  T

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Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 8841441 - 8841350
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 95  Q
    |||||||| |||| | ||||||||||||| |  ||| || ||| |||||||| | ||||||  ||||||| | |||||||||||||||||||    
T  8841441 cacactttctctttcctctcctcttctcttttcctagtgcatggggtgtacaagagtgtatgagaataaatggtgtctatgtaacattttcc 8841350  T

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Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 14548029 - 14548100
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 91  Q
    |||||||||||||||  |||||| ||| |||||||| |  ||||| |||||||||| |||||||||| ||||    
T  14548029 tctcctcttctctcttcctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 14548100  T

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Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 399778 - 399839
Alignment:
Q  277 tcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctctctc 338  Q
    |||||||| |||| ||||| |||| || | ||||||||||||| ||||||||||||| ||||    
T  399778 tcattccgactgaattaaagctagcaaacctcactttgttcacatgtttcttcttctttctc 399839  T

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Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 338
Target Start/End: Original strand, 28225768 - 28225832
Alignment:
Q  274 tcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctctctc 338  Q
    ||||||||||||||||||||||  ||  || |||||||||| |||| || |||||||| ||||||    
T  28225768 tcctcattccggctgagttaaagttaacaaacttcactttgatcacatgcttcttcttttctctc 28225832  T

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Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 338
Target Start/End: Original strand, 36206475 - 36206539
Alignment:
Q  274 tcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctctctc 338  Q
    ||||||||||| || ||||||| |||||| |||||||||| ||||  || |||||||||| ||||    
T  36206475 tcctcattccgactaagttaaagctagaaggcttcactttattcatttgcttcttcttctttctc 36206539  T

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Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 42221606 - 42221698
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 96  Q
    |||||||| |||| |||||| ||||||||||  | ||| |||  |||||||| | ||||||   |||||||||||| ||| ||||||||||||    
T  42221606 cacactttctctttcatctcatcttctctcttccaaatatatagggtgtacaagggtgtatgtaaataaaggatgtttatataacattttcct 42221698  T

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Target: scaffold1268 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 938 - 848
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 94  Q
    |||||||| |||| | |||||||||||||||  ||| || ||| |||||||| | |||||| |||||||||| ||| ||||||||||||||    
T  938 cacactttctctttcctctcctcttctctcttcctagtgcatggggtgtacaagagtgtatgggaataaagggtgtttatgtaacattttc 848  T

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Target: scaffold1267 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 938 - 848
Alignment:
Q  4 cacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 94  Q
    |||||||| |||| | |||||||||||||||  ||| || ||| |||||||| | |||||| |||||||||| ||| ||||||||||||||    
T  938 cacactttctctttcctctcctcttctctcttcctagtgcatggggtgtacaagagtgtatgggaataaagggtgtttatgtaacattttc 848  T

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Target: scaffold0110 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 8851 - 8779
Alignment:
Q  25 tcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 97  Q
    ||||||||||  ||||| |||| |||||||| | ||||||| ||||||| | |||||||||||||||||||||    
T  8851 tcttctctcttcctaatatatggggtgtacaagggtgtataagaataaaaggtgtctatgtaacattttcctt 8779  T

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Target: scaffold0531 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 333
Target Start/End: Complemental strand, 10324 - 10265
Alignment:
Q  274 tcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttct 333  Q
    ||||||||||||||||||||||||||| | || ||||||||| ||| || ||||||||||    
T  10324 tcctcattccggctgagttaaaactagcaggcctcactttgtgcacgtgcttcttcttct 10265  T

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Target: scaffold0316 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 17210 - 17288
Alignment:
Q  20 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 98  Q
    |||||||||||||||  |||   ||| |||||||||   |||||| | |||||||| ||||||||||||||||||||||    
T  17210 tctcctcttctctcttcctagaatataaggtgtacaaaggtgtatggaaataaagggtgtctatgtaacattttccttt 17288  T

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