View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1763_high_57 (Length: 313)
Name: NF1763_high_57
Description: NF1763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1763_high_57 |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 48857597 - 48857325
Alignment:
| Q |
1 |
atagaatacattcaccgtaagagtgtattgctgcctaggctaagcttaattcaggtgttgttgagggcgagggatcccagattgggtgtaaagnnnnnnn |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48857597 |
atagaatacattcaccgtaagagtgtattgctgcctaggctaggcttaattcaggtgttgttgagggcgagggatcccagattgggtgtaaagaaaaaaa |
48857498 |
T |
|
| Q |
101 |
taggttattcatagttcttttagaatcaaggttggaaaacttatcatttgattttaaaatctttgtggtgattatatcaaaccttcatnnnnnnnnnnnn |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48857497 |
taggttattcatagttcttttagaatcaaggttggaaaacttatcatttgattttaaaatctttgtggtgattatatcaaaccttcataaaaaataaaaa |
48857398 |
T |
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| Q |
201 |
nnnnnnctttttgtagtgatcattagatcaaaccttcatagaagctgtccatgcttatttttagaaaaggaaa |
273 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48857397 |
taaaaactttttgcagtgatcattagatcaaaccttcatagaagctgtccatgcttatttttagaaaaggaaa |
48857325 |
T |
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