View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1763_low_104 (Length: 232)
Name: NF1763_low_104
Description: NF1763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1763_low_104 |
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Alignment Details
Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 73 - 220
Target Start/End: Original strand, 43529050 - 43529197
Alignment:
| Q |
73 |
tccccgacgcccacatccaaccacctgtcatccgcatgaccgacgactccaaccaatactcttacggccgtgccttccaccccactaaactccccatgct |
172 |
Q |
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| T |
43529050 |
tccccgacgcccacatccaaccacctgtcatccgcatgaccaacgactccaaccaatactcttacggccgtgccttccaccccactaaactccccatgct |
43529149 |
T |
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| Q |
173 |
caaaccttcaccttcctcaacaaacatcacttccttcgccacttcctt |
220 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
43529150 |
caaaccttcaccttcctcaacaaacatcacttccttctccacttcctt |
43529197 |
T |
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