View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1763_low_107 (Length: 228)

Name: NF1763_low_107
Description: NF1763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1763_low_107
NF1763_low_107
[»] chr8 (27 HSPs)
chr8 (101-228)||(13129611-13129738)
chr8 (157-228)||(44780120-44780191)
chr8 (1-52)||(13129511-13129562)
chr8 (154-228)||(16852336-16852410)
chr8 (156-228)||(19703493-19703565)
chr8 (160-226)||(2203494-2203560)
chr8 (160-228)||(3624582-3624650)
chr8 (157-228)||(12988427-12988498)
chr8 (158-228)||(11819776-11819846)
chr8 (158-228)||(18540298-18540368)
chr8 (156-220)||(18897164-18897228)
chr8 (158-220)||(11518891-11518953)
chr8 (158-228)||(26688865-26688935)
chr8 (158-228)||(27750730-27750800)
chr8 (158-228)||(33727879-33727949)
chr8 (155-228)||(3058055-3058128)
chr8 (156-225)||(5264542-5264611)
chr8 (158-214)||(29431011-29431067)
chr8 (158-225)||(6436564-6436631)
chr8 (158-213)||(20994479-20994534)
chr8 (157-220)||(28783059-28783122)
chr8 (158-228)||(23361655-23361725)
chr8 (158-228)||(23874388-23874458)
chr8 (157-219)||(28566104-28566166)
chr8 (157-219)||(28573727-28573789)
chr8 (158-216)||(30483902-30483960)
chr8 (176-228)||(6536538-6536590)
[»] chr2 (21 HSPs)
chr2 (156-228)||(29503269-29503341)
chr2 (158-228)||(42327401-42327471)
chr2 (153-220)||(1729811-1729878)
chr2 (159-220)||(16918592-16918653)
chr2 (156-220)||(42602552-42602616)
chr2 (157-228)||(11251086-11251157)
chr2 (157-228)||(37480074-37480145)
chr2 (158-228)||(11062360-11062430)
chr2 (158-228)||(23052529-23052599)
chr2 (156-220)||(19322766-19322830)
chr2 (157-228)||(21195682-21195753)
chr2 (158-217)||(42922414-42922473)
chr2 (157-215)||(7799054-7799112)
chr2 (155-228)||(34041594-34041667)
chr2 (156-228)||(4060220-4060292)
chr2 (176-220)||(17737638-17737682)
chr2 (157-228)||(39714991-39715062)
chr2 (158-228)||(40416396-40416466)
chr2 (157-214)||(29197396-29197453)
chr2 (158-222)||(16381666-16381730)
chr2 (188-228)||(33839266-33839306)
[»] chr6 (9 HSPs)
chr6 (157-224)||(12188313-12188380)
chr6 (153-228)||(10338180-10338255)
chr6 (157-228)||(33549103-33549174)
chr6 (158-215)||(21418470-21418527)
chr6 (155-228)||(31622997-31623070)
chr6 (161-222)||(34293828-34293889)
chr6 (158-222)||(1056697-1056761)
chr6 (158-225)||(3779339-3779406)
chr6 (156-225)||(13330085-13330154)
[»] chr3 (21 HSPs)
chr3 (157-228)||(27093367-27093438)
chr3 (157-228)||(46518627-46518698)
chr3 (152-228)||(36720375-36720451)
chr3 (165-228)||(8075133-8075196)
chr3 (158-228)||(10445145-10445216)
chr3 (154-228)||(30311302-30311376)
chr3 (157-220)||(31520619-31520682)
chr3 (158-228)||(8170672-8170742)
chr3 (158-228)||(14186648-14186717)
chr3 (158-228)||(16354898-16354968)
chr3 (158-228)||(31788976-31789046)
chr3 (158-217)||(4222141-4222200)
chr3 (189-228)||(30715773-30715812)
chr3 (161-228)||(53412948-53413015)
chr3 (158-228)||(14339610-14339680)
chr3 (158-228)||(26481927-26481997)
chr3 (156-218)||(32651454-32651515)
chr3 (158-220)||(35111180-35111242)
chr3 (158-228)||(37788471-37788541)
chr3 (183-228)||(27259186-27259231)
chr3 (156-204)||(24481579-24481627)
[»] chr7 (27 HSPs)
chr7 (158-228)||(26459416-26459486)
chr7 (158-228)||(39631844-39631914)
chr7 (156-228)||(17041018-17041090)
chr7 (158-217)||(25021352-25021411)
chr7 (157-228)||(43215183-43215254)
chr7 (158-228)||(18363696-18363766)
chr7 (158-228)||(20335837-20335907)
chr7 (158-228)||(43590907-43590977)
chr7 (158-219)||(42836016-42836077)
chr7 (157-220)||(23552117-23552180)
chr7 (153-220)||(30442483-30442550)
chr7 (158-228)||(22760863-22760933)
chr7 (157-228)||(41487361-41487429)
chr7 (163-228)||(41519270-41519335)
chr7 (161-222)||(45976935-45976996)
chr7 (158-214)||(23301622-23301678)
chr7 (173-228)||(11700180-11700235)
chr7 (157-228)||(18056781-18056852)
chr7 (157-228)||(30579334-30579405)
chr7 (157-215)||(2446307-2446365)
chr7 (158-228)||(5579240-5579310)
chr7 (158-228)||(7801180-7801250)
chr7 (158-228)||(15137553-15137623)
chr7 (155-220)||(24046530-24046595)
chr7 (176-225)||(24438256-24438305)
chr7 (161-217)||(20952166-20952222)
chr7 (184-228)||(29385749-29385793)
[»] chr5 (22 HSPs)
chr5 (158-228)||(25627057-25627127)
chr5 (157-228)||(26078057-26078128)
chr5 (158-228)||(17028270-17028340)
chr5 (152-220)||(16436612-16436679)
chr5 (156-220)||(30883212-30883276)
chr5 (157-228)||(14285160-14285231)
chr5 (158-220)||(7918483-7918545)
chr5 (158-214)||(21549157-21549213)
chr5 (157-228)||(22737081-22737152)
chr5 (157-220)||(34984805-34984868)
chr5 (158-215)||(29075781-29075838)
chr5 (167-228)||(35796625-35796686)
chr5 (156-228)||(87429-87501)
chr5 (158-228)||(5390858-5390926)
chr5 (161-228)||(12877696-12877763)
chr5 (158-228)||(892480-892550)
chr5 (158-216)||(3252307-3252365)
chr5 (158-220)||(16457810-16457872)
chr5 (183-228)||(4793094-4793139)
chr5 (158-215)||(8278294-8278351)
chr5 (156-228)||(30109314-30109386)
chr5 (176-228)||(43442214-43442266)
[»] chr4 (23 HSPs)
chr4 (158-228)||(37109357-37109427)
chr4 (153-220)||(19680802-19680869)
chr4 (158-225)||(31759667-31759734)
chr4 (158-220)||(19238591-19238653)
chr4 (157-228)||(7949460-7949531)
chr4 (165-228)||(49576900-49576963)
chr4 (158-220)||(8030218-8030280)
chr4 (158-218)||(46545711-46545771)
chr4 (161-228)||(7292804-7292871)
chr4 (158-225)||(8714680-8714746)
chr4 (157-228)||(12798683-12798754)
chr4 (158-220)||(37274473-37274536)
chr4 (157-220)||(37720228-37720291)
chr4 (173-228)||(38869783-38869838)
chr4 (185-228)||(51969044-51969087)
chr4 (158-228)||(4249177-4249247)
chr4 (158-228)||(9936967-9937037)
chr4 (158-220)||(31826609-31826671)
chr4 (158-228)||(55427206-55427276)
chr4 (183-228)||(23377981-23378026)
chr4 (157-218)||(51250538-51250599)
chr4 (175-215)||(13015444-13015484)
chr4 (156-228)||(24827823-24827895)
[»] chr1 (21 HSPs)
chr1 (158-220)||(31794278-31794340)
chr1 (158-228)||(9165201-9165271)
chr1 (158-228)||(16169984-16170054)
chr1 (155-228)||(21547486-21547559)
chr1 (157-228)||(6122793-6122864)
chr1 (157-228)||(8177188-8177259)
chr1 (157-220)||(36371469-36371532)
chr1 (158-228)||(52116787-52116857)
chr1 (155-228)||(33700779-33700852)
chr1 (156-228)||(4566546-4566618)
chr1 (157-225)||(41508830-41508898)
chr1 (153-220)||(21268007-21268074)
chr1 (157-215)||(45235398-45235456)
chr1 (156-220)||(40257397-40257461)
chr1 (161-228)||(15786326-15786393)
chr1 (158-228)||(19528333-19528403)
chr1 (158-228)||(51703779-51703849)
chr1 (156-228)||(29056375-29056448)
chr1 (156-220)||(8904412-8904476)
chr1 (159-214)||(18459251-18459307)
chr1 (188-228)||(23566345-23566385)
[»] scaffold0002 (1 HSPs)
scaffold0002 (161-228)||(94977-95044)
[»] scaffold0122 (1 HSPs)
scaffold0122 (165-228)||(6925-6988)
[»] scaffold0258 (1 HSPs)
scaffold0258 (158-228)||(15329-15399)
[»] scaffold0238 (1 HSPs)
scaffold0238 (157-228)||(5192-5263)
[»] scaffold0172 (1 HSPs)
scaffold0172 (157-222)||(32781-32846)
[»] scaffold0126 (1 HSPs)
scaffold0126 (175-228)||(25353-25406)
[»] scaffold0006 (1 HSPs)
scaffold0006 (176-228)||(18317-18369)


Alignment Details
Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 101 - 228
Target Start/End: Original strand, 13129611 - 13129738
Alignment:
Q  101 accgtaaaaagattcaatgtttcaattgaaaaatannnnnnnagaatgtggattttaaacccacttgggttagcctagtggcattggtttgggacttggg 200  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13129611 accgtaaaaagattcaatgtttcaattgaaaaatatttttttagaatgtggattttaaacccacttgggttagcccagtggcattggtttgggacttggg 13129710  T
Q  201 agtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||||||||||||||||    
T  13129711 agtgcgctcctcctcaaggtttcaggtt 13129738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 44780191 - 44780120
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||    
T  44780191 aaacccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggtctcaggtt 44780120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13129511 - 13129562
Alignment:
Q  1 ttgtccgagtttgaatttggatatccgactccttatctcttaactcaaacta 52  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13129511 ttgtccgagtttgaatttggatatccgactccttatctcttaactcaaacta 13129562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 16852336 - 16852410
Alignment:
Q  154 tttaaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||||||| ||||||||| ||||| ||||||| |||||||| |||||||||| |||| |||||||    
T  16852336 tttaaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtt 16852410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 19703565 - 19703493
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||||| ||||||||| ||||| ||||||| || ||||| ||||||||||||||| |||||||    
T  19703565 taaacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggtt 19703493  T

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Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 2203494 - 2203560
Alignment:
Q  160 cccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcagg 226  Q
    |||||||||||| ||||||||| ||||| ||||||| |||||||| ||||||||||||||| |||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagg 2203560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 3624582 - 3624650
Alignment:
Q  160 cccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||| ||||||||| ||||| ||||||| |||||||| ||||||| ||||||| |||||||    
T  3624582 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggtt 3624650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 12988427 - 12988498
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||| || ||||||||| ||||| |||| || ||| |||| |||||||||||||||||||||||    
T  12988427 aaacccacttggattggcctagtggtattggcttggaacctggaagtgtgctcctcctcaaggtttcaggtt 12988498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 11819776 - 11819846
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||| |||||||  |||||||| || || |||||||||||||||| ||||||||||||||| |||||||    
T  11819776 aacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggtt 11819846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 18540298 - 18540368
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| ||||||||| ||||| ||||||| ||||||||  || ||||||||||| |||||||    
T  18540298 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggtt 18540368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 18897164 - 18897228
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    |||||||||||||||| |||||||||  |||||||||||| |  ||||| |||||||||||||||    
T  18897164 taaacccacttgggttggcctagtggtgttggtttgggaccttagagtgtgctcctcctcaaggt 18897228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 11518953 - 11518891
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    |||||||||||||||||||||||| || || |||| |||||||||||  | ||||||||||||    
T  11518953 aacccacttgggttagcctagtggtataggcttggaacttgggagtgtacccctcctcaaggt 11518891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 26688865 - 26688935
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| |||| ||||  |||| ||||||| | |||||| ||||||||||||||| |||||||    
T  26688865 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggtt 26688935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 27750730 - 27750800
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||| |||||||  ||| |||| || || |||||||||||||||| ||||||||||||||| |||||||    
T  27750730 aacccatttgggttgccctcgtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggtt 27750800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 33727949 - 33727879
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||| |||||||  |||||||| || |||||| ||||||| |||| ||||||||||||||| |||||||    
T  33727949 aacccatttgggttgccctagtggtataggtttgagacttggaagtgtgctcctcctcaaggtctcaggtt 33727879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 3058128 - 3058055
Alignment:
Q  155 ttaaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||| ||||||| | || |||| ||||||||||| |||||||||| |||||||  |||||| |||||||    
T  3058128 ttaaacccatttgggttggtctggtggtattggtttgggtcttgggagtgtgctcctctgcaaggtctcaggtt 3058055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 5264542 - 5264611
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcag 225  Q
    |||||||||||||||| ||||||||| ||||| |||| || ||||| || |||||||||| |||| ||||    
T  5264542 taaacccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctcgaggtctcag 5264611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 29431011 - 29431067
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcct 214  Q
    |||||||||||||| |||| | || ||||| |||||||||||||||| |||||||||    
T  29431011 aacccacttgggttggcctggcggtattggcttgggacttgggagtgtgctcctcct 29431067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 6436631 - 6436564
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcag 225  Q
    ||||||||||||||  ||| |||| ||||| ||||||||| |||||| |||||||| |||||| ||||    
T  6436631 aacccacttgggttgccctggtggtattggcttgggacttaggagtgtgctcctccgcaaggtctcag 6436564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 20994534 - 20994479
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcc 213  Q
    |||||||||||||| ||||||||| ||||  ||||||| |||||||| ||||||||    
T  20994534 aacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctcc 20994479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 28783059 - 28783122
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    ||||||||||||||| || | |||| ||||| ||| ||| |||||||| |||||||||||||||    
T  28783059 aaacccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggt 28783122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 23361725 - 23361655
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||  ||| |||| ||||  ||||||  |||||||| ||||||||||||||| |||||||    
T  23361725 aacccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggtt 23361655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 23874458 - 23874388
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| ||||||||| ||||| ||||||| ||||| |  || ||||||| |||| |||||||    
T  23874458 aacccacttgggttggcctagtggtattggcttgggacctgggaatctgcgcctcctcgaggtctcaggtt 23874388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 28566104 - 28566166
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaagg 219  Q
    |||||||||||||||  |||||||| ||||||||||||| |  ||||| |||||| |||||||    
T  28566104 aaacccacttgggttgacctagtggtattggtttgggaccttagagtgtgctccttctcaagg 28566166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 28573727 - 28573789
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaagg 219  Q
    |||||||||||||||  |||||||| ||||||||||||| |  ||||| |||||| |||||||    
T  28573727 aaacccacttgggttgacctagtggtattggtttgggaccttagagtgtgctccttctcaagg 28573789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 30483960 - 30483902
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctca 216  Q
    |||||||||||||| ||| ||||| ||||| ||||||  |||||||| |||||||||||    
T  30483960 aacccacttgggttggcccagtggtattggcttgggatatgggagtgtgctcctcctca 30483902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 6536538 - 6536590
Alignment:
Q  176 tagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||| ||||| ||||||| | |||||| ||||||||||||||| |||||||    
T  6536538 tagtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggtt 6536590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 1e-21; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 29503269 - 29503341
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||||||| ||||||||||||||| |||||||    
T  29503269 taaacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggtt 29503341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 42327471 - 42327401
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| ||||||||| ||||| ||||||| |||||||| ||||||||||||||| |||||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggtt 42327401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 1729811 - 1729878
Alignment:
Q  153 ttttaaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    ||||||||||||||||||| | ||||||| ||||| |||||||||||||||| |||||||||| ||||    
T  1729811 ttttaaacccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcctctaggt 1729878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 16918653 - 16918592
Alignment:
Q  159 acccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    ||||||||||||| ||||||||| ||||||||||||  |||||||| |||||||||||||||    
T  16918653 acccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggt 16918592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 42602552 - 42602616
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    |||||||||||||||| ||||||||| ||||| ||||||| |||||||| |||||| ||||||||    
T  42602552 taaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggt 42602616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 11251086 - 11251157
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||| |||| || |||||| ||||| ||||||||||| |||| ||||||||||||||| |||||||    
T  11251086 aaacccacttaggttggcttagtggtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtt 11251157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 37480074 - 37480145
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||| |||| |||| ||||| ||||||| || ||||| ||||||||||||||| |||||||    
T  37480074 aaacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggtt 37480145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 11062360 - 11062430
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| ||||||||  ||||| |||| ||||||||||| ||| ||||||||||| |||||||    
T  11062360 aacccacttgggttggcctagtgatattggcttggaacttgggagtgtgcttctcctcaaggtctcaggtt 11062430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 23052599 - 23052529
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||| |||| |||| |||| ||||| |||||||||||||||| ||| ||||||||||| |||||||    
T  23052599 aacccacttaggttggcctggtggtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggtt 23052529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 19322766 - 19322830
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    ||||||||||||||||   ||||||| ||||||||||||| |||||||| ||||||| |||||||    
T  19322766 taaacccacttgggttgatctagtggtattggtttgggacctgggagtgtgctcctcttcaaggt 19322830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 21195753 - 21195682
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||| |||||||  |||||||| || || |||| ||||||||||| ||||||||||||||| |||||||    
T  21195753 aaacccatttgggttgccctagtggtataggcttggaacttgggagtgtgctcctcctcaaggtctcaggtt 21195682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 42922414 - 42922473
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaa 217  Q
    |||||||||||||| ||||||||| ||||| |||| || |||||||| ||||||||||||    
T  42922414 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaa 42922473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 7799112 - 7799054
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctc 215  Q
    |||||||||||||||  ||| |||| ||||| |||||||||||||||| ||||||||||    
T  7799112 aaacccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcctc 7799054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 34041667 - 34041594
Alignment:
Q  155 ttaaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||||| ||||||||| ||||  || |||  || ||||| ||||||||||||||| |||||||    
T  34041667 ttaaacccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtctcaggtt 34041594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 4060292 - 4060220
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||||| ||||||||| |||||||||  || || ||||| ||| ||||||||| | |||||||    
T  4060292 taaacccacttgggttggcctagtggtattggtttgaaacctgagagtgtgcttctcctcaagatctcaggtt 4060220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 17737682 - 17737638
Alignment:
Q  176 tagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    |||||| ||||||||| |||||||||||| |||||||||||||||    
T  17737682 tagtggtattggtttgtgacttgggagtgtgctcctcctcaaggt 17737638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 39714991 - 39715062
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||| || | |||| ||||  ||||||| |||||||| |||||||||| |||| |||||||    
T  39714991 aaacccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggtt 39715062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 40416466 - 40416396
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| ||||||||| ||||  |||| || |||||||  ||||||||| ||||| |||||||    
T  40416466 aacccacttgggttggcctagtggtattgacttggaacctgggagtatgctcctccttaaggtctcaggtt 40416396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 29197453 - 29197396
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcct 214  Q
    ||||||||||||||| || | |||| ||||  |||||||||||||||| |||||||||    
T  29197453 aaacccacttgggttggcttggtggtattgacttgggacttgggagtgtgctcctcct 29197396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 16381730 - 16381666
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggttt 222  Q
    |||||||||||||| ||||||||| || || ||||||  || |||||  ||||||||||||||||    
T  16381730 aacccacttgggttggcctagtggtataggcttgggatctgagagtgttctcctcctcaaggttt 16381666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 33839306 - 33839266
Alignment:
Q  188 tttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||| |||||||| ||||||||||||||| |||||||    
T  33839306 tttgggacatgggagtgtgctcctcctcaaggtctcaggtt 33839266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 12188380 - 12188313
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttca 224  Q
    ||||||||||||||| ||||||||| ||||| ||||||| |||||||| |||||||||||||||||||    
T  12188380 aaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttca 12188313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 10338255 - 10338180
Alignment:
Q  153 ttttaaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||| |||||||||| || | |||| ||||| ||||||| | |||||| ||||||||||||||| |||||||    
T  10338255 ttttaaactcacttgggttggcatggtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggtt 10338180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 33549103 - 33549174
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||| | || |||| ||||| ||||||| |||||||| |||||||||| |||| |||||||    
T  33549103 aaacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtt 33549174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 21418470 - 21418527
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctc 215  Q
    |||||| ||||||| |||| |||| ||||| |||||||||||||||| ||||||||||    
T  21418470 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctc 21418527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 31623070 - 31622997
Alignment:
Q  155 ttaaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||||| | |  |||| ||||| ||||||| |||||||| |||||||||| |||| |||||||    
T  31623070 ttaaacccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtt 31622997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 34293889 - 34293828
Alignment:
Q  161 ccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggttt 222  Q
    |||||||||||  |||||||| |||||||||| | ||||||||| |||||||||||| ||||    
T  34293889 ccacttgggttgacctagtggtattggtttggaatttgggagtgtgctcctcctcaaagttt 34293828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 1056761 - 1056697
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggttt 222  Q
    ||||||||||||||  |||||||| |||||  ||||||||||||||  |||| ||||||||||||    
T  1056761 aacccacttgggttgacctagtggtattggcctgggacttgggagtatgctcatcctcaaggttt 1056697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 3779339 - 3779406
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcag 225  Q
    ||||||||| ||||  |||||||| ||||| ||| |||||||||||| |||||| |||||||| ||||    
T  3779339 aacccacttaggttgacctagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcag 3779406  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 13330085 - 13330154
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcag 225  Q
    ||||||||||||||||  |||||||| ||||  || | ||||||||||  ||||||||||||||| ||||    
T  13330085 taaacccacttgggttgacctagtggtattgactttgaacttgggagtaagctcctcctcaaggtctcag 13330154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 27093438 - 27093367
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||| ||||||||| ||||| |||| ||||||||||| ||||||||||||||| |||||||    
T  27093438 aaacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtt 27093367  T

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Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 46518627 - 46518698
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||| || |||||| ||||| ||||||  |||||||| |||||||||||||||||||||||    
T  46518627 aaacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtt 46518698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 36720375 - 36720451
Alignment:
Q  152 attttaaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||||||||| | || |||| ||||| ||||||  |||||||| |||||||||| ||||||||||||    
T  36720375 attttaaacccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggtt 36720451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 8075196 - 8075133
Alignment:
Q  165 ttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||  |||||||| || || |||||||||||||||| |||||||||||||||||||||||    
T  8075196 ttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtttcaggtt 8075133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 10445216 - 10445145
Alignment:
Q  158 aacccacttgggttagcctagtggc-attggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| |||||||||| ||||| ||||||| |||||||| |||||||||| |||| |||||||    
T  10445216 aacccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtt 10445145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 30311302 - 30311376
Alignment:
Q  154 tttaaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||| |||||| ||||||||| || || ||||||  |||||||| ||||||||||||||| |||||||    
T  30311302 tttaaacccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggtt 30311376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 31520682 - 31520619
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    ||||||||||||||| |||| |||||||||| ||||||  |||||||| |||||||||| ||||    
T  31520682 aaacccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggt 31520619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 8170672 - 8170742
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||| ||||||| ||||||||| ||||| |||  ||||||||||| |||||| |||||||| |||||||    
T  8170672 aacccatttgggttggcctagtggtattggcttgaaacttgggagtgtgctcctactcaaggtctcaggtt 8170742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 14186648 - 14186717
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| ||||||||| ||||  ||||||| | |||||| ||||||||||||||| |||||||    
T  14186648 aacccacttgggttggcctagtggtattgtcttgggacct-ggagtgtgctcctcctcaaggtctcaggtt 14186717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 16354968 - 16354898
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| ||||||||| ||||| |||| || || ||||| ||||||||||| ||| |||||||    
T  16354968 aacccacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggtt 16354898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 31789046 - 31788976
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| ||||||||  ||||| ||||||  |||||||| |||||||||| |||||| |||||    
T  31789046 aacccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcctcgaggttttaggtt 31788976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 4222141 - 4222200
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaa 217  Q
    |||||||||||||| || |||||| ||||| ||||||  |||||||| ||||||||||||    
T  4222141 aacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctcaa 4222200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 228
Target Start/End: Original strand, 30715773 - 30715812
Alignment:
Q  189 ttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  30715773 ttgggacttgggagtgtgctcctcctcaatgtttcaggtt 30715812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 53412948 - 53413015
Alignment:
Q  161 ccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||| | ||||||| ||||| |||  || |||||||| ||||||||||||||| |||||||    
T  53412948 ccacttgggttggtctagtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggtt 53413015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 14339610 - 14339680
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||| |||| || |||| |||| ||||| |||||| ||||||||| |||||||||||| || |||||||    
T  14339610 aacccagttggattggcctggtggtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggtt 14339680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 26481927 - 26481997
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||||| | |||| | ||| ||||||| || ||||| |||||||||||| |||| |||||    
T  26481927 aacccacttgggttagcttggtggtaatggcttgggacctgagagtgtgctcctcctcaaagttttaggtt 26481997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 32651515 - 32651454
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaag 218  Q
    ||||||||||| | || ||||||||| ||||| ||||||| |||||||| |||||||||||||    
T  32651515 taaacccacttag-ttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaag 32651454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 35111180 - 35111242
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    ||||||||||| || |||||||||||||| |||| ||| |||||||| |||| ||||| ||||    
T  35111180 aacccacttggattggcctagtggcattgatttgagacctgggagtgtgctcatcctcgaggt 35111242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 37788541 - 37788471
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| ||| ||||| ||||  |||| || | |||||| ||||||||||||||| |||||||    
T  37788541 aacccacttgggttggcccagtggtattgacttggaacctaggagtgtgctcctcctcaaggtctcaggtt 37788471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 27259186 - 27259231
Alignment:
Q  183 attggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||| ||||||| |||||||| |||||||||| ||||||||||||    
T  27259186 attggcttgggacctgggagtgtgctcctcctcgaggtttcaggtt 27259231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 24481579 - 24481627
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtg 204  Q
    |||||||||||| ||| | ||||||| |||||||||||||||| |||||    
T  24481579 taaacccacttgagttggtctagtggtattggtttgggacttgagagtg 24481627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 26459486 - 26459416
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| ||||||||| ||||| ||||||| |||||||| ||||||||||||||| |||||||    
T  26459486 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggtt 26459416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 39631844 - 39631914
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| ||||||||| ||||| ||||||| |||||||  ||||||||||||||| |||||||    
T  39631844 aacccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggtt 39631914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 17041090 - 17041018
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||||| | ||||||||||||| ||||||  ||| |||| ||||||||||||||| |||||||    
T  17041090 taaacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggtctcaggtt 17041018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 25021411 - 25021352
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaa 217  Q
    |||||||||||||| ||||||||| ||||| ||||||| |||||||| ||||||||||||    
T  25021411 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaa 25021352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 43215183 - 43215254
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||| | ||||||| ||||| ||||||| | |||||| ||||||||||||||| |||||||    
T  43215183 aaacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggtt 43215254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 18363696 - 18363766
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| ||||||||| || || ||| || ||||||||| ||||||||||||||| |||||||    
T  18363696 aacccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtt 18363766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 20335907 - 20335837
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| | |||| || ||||| |||||||||||||||| |||||||||| |||| |||||||    
T  20335907 aacccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggtt 20335837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 43590907 - 43590977
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||| ||||||| |||| |||| ||||| |||||||||||||||| |||||||||||| || |||||||    
T  43590907 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggtt 43590977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 42836077 - 42836016
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaagg 219  Q
    |||||||||||||| ||||||||| ||||| ||||||| |||||||| |||| |||||||||    
T  42836077 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcctcaagg 42836016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 23552117 - 23552180
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    ||||||||||||||| ||||||||  ||||  ||||||| |||||||| |||||||||||||||    
T  23552117 aaacccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggt 23552180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 30442483 - 30442550
Alignment:
Q  153 ttttaaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    |||| |||||||||||||| ||| ||||| ||||| ||||||| |||||||  |||||||||||||||    
T  30442483 tttttaacccacttgggttggcccagtggtattggcttgggacctgggagtttgctcctcctcaaggt 30442550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 22760863 - 22760933
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| | || |||| ||||  ||||||| |||||||| ||||||||||||||| |||||||    
T  22760863 aacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggtt 22760933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 41487361 - 41487429
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||| |||| |||| ||||| ||||||||||||||||   | ||||||||||| |||||||    
T  41487361 aaacccacttgggttggcctggtggtattggcttgggacttgggagtg---ttctcctcaaggtctcaggtt 41487429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 41519335 - 41519270
Alignment:
Q  163 acttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||| ||||||||| ||||  |||||| || |||||| ||||||||||||||| |||||||    
T  41519335 acttgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggtt 41519270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 45976996 - 45976935
Alignment:
Q  161 ccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggttt 222  Q
    ||||||||||| ||||||||| ||||| ||| ||| |||||||| ||||||||| |||||||    
T  45976996 ccacttgggttggcctagtggtattggcttgtgacctgggagtgtgctcctccttaaggttt 45976935  T

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Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 23301678 - 23301622
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcct 214  Q
    |||||||||||||| |||| |||| ||||  |||||||||||||||| |||||||||    
T  23301678 aacccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctcct 23301622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 11700180 - 11700235
Alignment:
Q  173 gcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||| ||| |||||| ||||  ||||||||||||||| |||||||    
T  11700180 gcctagtggcattggcttgagacttgagagtttgctcctcctcaaggtctcaggtt 11700235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 18056852 - 18056781
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||||| || |||| ||||  ||||| ||| |||||| ||||||||| ||||| |||||||    
T  18056852 aaacccacttgggttagtctggtggtattgacttgggtcttcggagtgtgctcctcctgaaggtctcaggtt 18056781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 30579334 - 30579405
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||| |||| |||| ||||| ||| ||| ||||||||  | |||||||||||| |||||||    
T  30579334 aaacccacttgggttggcctggtggtattggcttgagacctgggagtgtccacctcctcaaggtctcaggtt 30579405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 2446307 - 2446365
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctc 215  Q
    ||||||||||||||| | ||  ||| ||||| |||||||||||||||| ||||||||||    
T  2446307 aaacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctc 2446365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 5579310 - 5579240
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||  ||| ||||  |||| ||||||| | |||||| ||||||||||||||| |||||||    
T  5579310 aacccacttgggttgacctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggtt 5579240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 7801180 - 7801250
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||| || |||| |||| ||||  ||||||| |||||||| ||||||| ||||||| |||||||    
T  7801180 aacccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctcttcaaggtctcaggtt 7801250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 15137553 - 15137623
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| |||| |||| | ||  |||||| || |||||| ||||||||||||||| |||||||    
T  15137553 aacccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtctcaggtt 15137623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 24046530 - 24046595
Alignment:
Q  155 ttaaacccacttgggttagcctagtggcattgg-tttgggacttgggagtgcgctcctcctcaaggt 220  Q
    ||||||||||||||||||||||| ||| ||||| |||| ||| |||||||| | |||||||||||||    
T  24046530 ttaaacccacttgggttagcctactggtattggctttgtgacctgggagtgtg-tcctcctcaaggt 24046595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 24438305 - 24438256
Alignment:
Q  176 tagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcag 225  Q
    |||||| |||||||||||||||||||||| |||| | || ||||||||||    
T  24438305 tagtggtattggtttgggacttgggagtgtgctctttcttaaggtttcag 24438256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 20952222 - 20952166
Alignment:
Q  161 ccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaa 217  Q
    |||||||||||  |||  ||| ||||||||||||| |||||||| ||||||||||||    
T  20952222 ccacttgggttgacctgatggtattggtttgggacctgggagtgtgctcctcctcaa 20952166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 29385793 - 29385749
Alignment:
Q  184 ttggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||| ||||||||| |||||| ||||||||||||||| |||||||    
T  29385793 ttggcttgggactttggagtgtgctcctcctcaaggtctcaggtt 29385749  T

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Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 25627057 - 25627127
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| ||||||||| ||||| |||| ||||||||||| ||||||||||||||| |||||||    
T  25627057 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtt 25627127  T

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Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 26078128 - 26078057
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||  ||| ||| ||||||| |||||||    
T  26078128 aaacccacttgggttggcctagtggtattggtttgggacttgggagtatgcttctcttcaaggtctcaggtt 26078057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 17028340 - 17028270
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||  |||||| | ||||| |||||||||||||||| ||||||||||||||| |||||||    
T  17028340 aacccacttgggttgacctagttgtattgggttgggacttgggagtgtgctcctcctcaaggtctcaggtt 17028270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 16436612 - 16436679
Alignment:
Q  152 attttaaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    ||||||||| |||||||||| ||||||||| ||||| ||||||||| |||||| |||||||||||||||    
T  16436612 attttaaactcacttgggttggcctagtggtattggcttgggactt-ggagtgtgctcctcctcaaggt 16436679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 30883276 - 30883212
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    |||||||||||||||| | ||||||| ||||| ||||||| |||||||| |||||||||||||||    
T  30883276 taaacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggt 30883212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 14285160 - 14285231
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||| ||| ||||| ||||| |||| || |||||||| ||||||||||||||| |||||||    
T  14285160 aaacccacttgggttggccgagtggaattggcttggaacctgggagtgtgctcctcctcaaggtctcaggtt 14285231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 7918545 - 7918483
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    |||||||||||||| ||||||||| ||||| |||| || ||||||||| ||||||||||||||    
T  7918545 aacccacttgggttggcctagtggtattggcttggaacctgggagtgcactcctcctcaaggt 7918483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 21549213 - 21549157
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcct 214  Q
    |||||||||||||| ||||||||| ||||| ||||||| |||||||| |||||||||    
T  21549213 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 21549157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 22737081 - 22737152
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||| | ||||||| ||||| ||||||||||| |||| |||||||| ||| || |||||||    
T  22737081 aaacccacttgggttggtctagtggtattggcttgggacttggaagtgtgctcctccccaatgtctcaggtt 22737152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 34984805 - 34984868
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    ||||||||||||||| | ||||||| ||||| |||| || |||||||| |||||||||||||||    
T  34984805 aaacccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggt 34984868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 29075781 - 29075838
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctc 215  Q
    |||||||||||||| ||||||||| ||||| ||||||  |||||||| ||||||||||    
T  29075781 aacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctc 29075838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 35796686 - 35796625
Alignment:
Q  167 gggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||| ||||||||| |||||||| |||||| |||||| ||||||||||| | |||||||||    
T  35796686 gggttggcctagtggtattggttttggacttaggagtgtgctcctcctcatgatttcaggtt 35796625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 87501 - 87429
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||| |||| ||||||||| ||||  |||| |  |||||||| ||||||||||||||| |||||||    
T  87501 taaacccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcctcctcaaggtctcaggtt 87429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 5390926 - 5390858
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||| ||||||| ||||||||| ||||| ||||| |||||||||  |||||||||| |||| |||||||    
T  5390926 aacccatttgggttggcctagtggtattggcttggggcttgggagt--gctcctcctcgaggtctcaggtt 5390858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 12877696 - 12877763
Alignment:
Q  161 ccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||| ||| | |||||||||||||||||||| ||||||||| | | |||||||| || |||||||    
T  12877696 ccacttgagttggtctagtggcattggtttgggatttgggagtgtgtttctcctcaatgtctcaggtt 12877763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 892550 - 892480
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||| ||||||| ||||||||| ||||| ||||||| |  |||||  |||||||||||||| |||||||    
T  892550 aacccatttgggttggcctagtggtattggcttgggacctcagagtgtactcctcctcaaggtctcaggtt 892480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 3252365 - 3252307
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctca 216  Q
    |||||||||||||| ||||||||| ||||  ||| ||||||||||||| ||| ||||||    
T  3252365 aacccacttgggttggcctagtggtattgacttgagacttgggagtgcactcttcctca 3252307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 16457810 - 16457872
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    ||||||||| |||| |||| |||| ||||| ||||||| | |||||| |||||||||||||||    
T  16457810 aacccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggt 16457872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 4793139 - 4793094
Alignment:
Q  183 attggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||| |||||||| |||||||||| |||| |||||||    
T  4793139 attggtttgggacctgggagtgtgctcctcctcgaggtctcaggtt 4793094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 8278351 - 8278294
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctc 215  Q
    |||||||||||||| | ||  ||| ||||| |||||||||||||||| ||||||||||    
T  8278351 aacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctc 8278294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 30109386 - 30109314
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||||| || | |||| ||||| ||| ||| |||||||| |||||||||  |||| |||||||    
T  30109386 taaacccacttgggttggcttggtggtattggcttgtgacctgggagtgtgctcctccttgaggtctcaggtt 30109314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 43442214 - 43442266
Alignment:
Q  176 tagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||| ||||||||| ||  |||||||| ||||||||||||||| |||||||    
T  43442214 tagtggtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggtt 43442266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 37109427 - 37109357
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| ||||||||| ||||| ||||||| |||||||| ||||||||||||||| |||||||    
T  37109427 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggtt 37109357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 19680869 - 19680802
Alignment:
Q  153 ttttaaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    |||||||||||||||| || ||||||||| ||| | |||||||||||||||| |||| ||||||||||    
T  19680869 ttttaaacccacttggattggcctagtggtattcgcttgggacttgggagtgtgctcttcctcaaggt 19680802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 31759734 - 31759667
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcag 225  Q
    ||||||||||||||   ||||||| ||||| |||||||||||||||| ||||||||||||||| ||||    
T  31759734 aacccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctcag 31759667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 19238653 - 19238591
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    |||||||||||||| |||| |||| ||||| |||||||||||||||| |||||||||| ||||    
T  19238653 aacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggt 19238591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 7949531 - 7949460
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||| | |||||| || ||||| ||||||| | |||||| ||||||||||||||| |||||||    
T  7949531 aaacccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggtt 7949460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 49576963 - 49576900
Alignment:
Q  165 ttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||| |||| |||| ||||| || ||||||||||||| ||||||||||||||| |||||||    
T  49576963 ttgggttggcctggtggtattggctttggacttgggagtgtgctcctcctcaaggtctcaggtt 49576900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 8030280 - 8030218
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    ||||||||||| ||  |||||||| || || |||||||||||||||| |||||||||||||||    
T  8030280 aacccacttggattgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggt 8030218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 46545711 - 46545771
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaag 218  Q
    |||||||||||||| ||||||||| ||||| ||| ||| || ||||| |||||||||||||    
T  46545711 aacccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcctcaag 46545771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 7292871 - 7292804
Alignment:
Q  161 ccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||| | ||||||| ||||| |||| || |||||||| |||||||||||| || |||||||    
T  7292871 ccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggtt 7292804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 8714680 - 8714746
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcag 225  Q
    ||||||||||||||| |||||||| ||||||||||||  || ||| | | ||||||||||||||||||    
T  8714680 aacccacttgggtta-cctagtggtattggtttgggatctgagagcgtgttcctcctcaaggtttcag 8714746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 12798683 - 12798754
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||||  || ||||| ||||||||| ||  |||||||| ||| |||||| ||||||||||||    
T  12798683 aaacccacttgggttgaccgagtggtattggtttgagatctgggagtgtgctgctcctcgaggtttcaggtt 12798754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 37274536 - 37274473
Alignment:
Q  158 aacccacttgggttagcctagtggca-ttggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    |||||||||||||| ||||||| | | |||| ||||||| |||||||| |||||||||||||||    
T  37274536 aacccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggt 37274473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 37720291 - 37720228
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    ||||||||||||||| |||| |||  ||||| ||||||| |||||||| || ||||||||||||    
T  37720291 aaacccacttgggttggcctggtgttattggcttgggacctgggagtgtgcccctcctcaaggt 37720228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 38869783 - 38869838
Alignment:
Q  173 gcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||| ||||| ||||||  |||||||| ||||||||||||||| |||||||    
T  38869783 gcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggtt 38869838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 51969044 - 51969087
Alignment:
Q  185 tggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||| || ||||||||| |||||||||||||||||||||||    
T  51969044 tggtttgagatttgggagtgtgctcctcctcaaggtttcaggtt 51969087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 4249177 - 4249247
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||| | || ||||||||| || || |||||| || |||||| ||||||||||||||| |||||||    
T  4249177 aacccacttcgcttggcctagtggtataggcttgggattttggagtgtgctcctcctcaaggtctcaggtt 4249247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 9937037 - 9936967
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||| ||||||||| ||||||||| || |  ||| |||||||||||| |||||||||| | ||||||||||    
T  9937037 aacctacttgggttggcctagtggtatcgacttgagacttgggagtgtgctcctcctcgaagtttcaggtt 9936967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 31826609 - 31826671
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    ||||||||||||||  |||||||| || || |||||| ||| ||||| |||||||||||||||    
T  31826609 aacccacttgggttgccctagtggtataggcttgggatttgcgagtgtgctcctcctcaaggt 31826671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 55427276 - 55427206
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| |||| |||| ||||| ||||||| |||||||  |||||| ||| |||| |||||||    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggtt 55427206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 23377981 - 23378026
Alignment:
Q  183 attggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||| ||||||| |||||||| ||||||||||||||| |||||||    
T  23377981 attggcttgggacctgggagtgtgctcctcctcaaggtctcaggtt 23378026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 51250599 - 51250538
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaag 218  Q
    ||||||||||||||| |||| |||| ||||| ||||||  |||||||| ||||| |||||||    
T  51250599 aaacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaag 51250538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 13015444 - 13015484
Alignment:
Q  175 ctagtggcattggtttgggacttgggagtgcgctcctcctc 215  Q
    ||||||| ||||| |||||||||||||||| ||||||||||    
T  13015444 ctagtggtattggcttgggacttgggagtgtgctcctcctc 13015484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 24827823 - 24827895
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||| |||| | |  |||| ||||  ||||||| ||||||||||||||||||| |||| |||||||    
T  24827823 taaacccactttggttggtccggtggtattgacttgggacctgggagtgcgctcctcctcgaggtctcaggtt 24827895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 31794340 - 31794278
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||| |||||||||||||||    
T  31794340 aacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggt 31794278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 9165271 - 9165201
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| ||||||||| ||||| ||||||| |||||||| |||||||||||| || |||||||    
T  9165271 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggtt 9165201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 16170054 - 16169984
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||||||||||| |||| ||||  ||||||| |||||||| | |||||||||||||||||||||    
T  16170054 aacccacttgggttagcctggtggtattgacttgggacctgggagtgtgttcctcctcaaggtttcaggtt 16169984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 21547559 - 21547486
Alignment:
Q  155 ttaaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||| ||||||||| ||||||||| ||||| ||||||| |||||| | |||||||||| ||||||||||||    
T  21547559 ttaaaccgacttgggttggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggtt 21547486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 6122793 - 6122864
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||| |||||||  |||||||| || || |||||||||||||||| ||||||||||||||| |||||||    
T  6122793 aaacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggtt 6122864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 8177259 - 8177188
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||| ||| ||| ||||||||| ||||| ||||||  |||||||| |||||||||||||||||||||||    
T  8177259 aaacccatttgagttggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtt 8177188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 36371469 - 36371532
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    ||||||||||||||| ||||||||| ||||| |||| || |||||||| |||||||||||||||    
T  36371469 aaacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggt 36371532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 52116857 - 52116787
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||| ||||||| |||| |||| ||||| |||||||||||||||| |||||||||||| || |||||||    
T  52116857 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggtt 52116787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 33700852 - 33700779
Alignment:
Q  155 ttaaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||| |||||||||||| ||||||||| ||||| |||| |  |||||||| ||||||||||||||| |||||||    
T  33700852 ttaagcccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggtt 33700779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 4566546 - 4566618
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||||| ||||||||  ||||| |||| || |||||||| ||||||||||| ||| |||||||    
T  4566546 taaacccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctcctcagggtctcaggtt 4566618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 41508830 - 41508898
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcag 225  Q
    ||||||||||||||| |||| |||| | ||||||||||  |||||||| ||||||||||||||| ||||    
T  41508830 aaacccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcctcaaggtctcag 41508898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 21268074 - 21268007
Alignment:
Q  153 ttttaaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    ||||||||||||||| ||| | ||||| | ||||| |||||||||||||||| |||||||||| ||||    
T  21268074 ttttaaacccacttgagttgggctagtagtattggcttgggacttgggagtgtgctcctcctctaggt 21268007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 45235456 - 45235398
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctc 215  Q
    ||||||||||||||| | ||  ||| |||||||||||||||||||||| ||||||||||    
T  45235456 aaacccacttgggttggtctgatggtattggtttgggacttgggagtgtgctcctcctc 45235398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 40257397 - 40257461
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    |||||||||||||||| |||| |||| ||||| ||| ||| |||||||| |||||||||| ||||    
T  40257397 taaacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggt 40257461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 15786393 - 15786326
Alignment:
Q  161 ccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||| | ||||| | ||||| ||||||  |||||||| ||||||||||||||| |||||||    
T  15786393 ccacttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggtt 15786326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 19528403 - 19528333
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| |||| |||| ||||| ||||||  |  ||||| ||||||||||||||| |||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggtt 19528333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 51703779 - 51703849
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||| ||||||| | ||||||| ||||| |||| |  |||||||| |||||||||||| ||||||||||    
T  51703779 aacccatttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggtt 51703849  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 29056375 - 29056448
Alignment:
Q  156 taaacccacttgggttagcctagtggcatt-ggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||||| | | ||||| ||| |||||||||| |||||||| |||| |||| ||| |||||||||    
T  29056375 taaacccacttgggttggtccagtggtatttggtttgggacctgggagtgtgctcatcctgaagttttcaggtt 29056448  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 8904412 - 8904476
Alignment:
Q  156 taaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggt 220  Q
    |||||||||||||||| ||||||| | ||||  ||||||  || ||||| |||||||||||||||    
T  8904412 taaacccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggt 8904476  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 18459307 - 18459251
Alignment:
Q  159 acccacttgggttagcctagtggca-ttggtttgggacttgggagtgcgctcctcct 214  Q
    ||||||||||||| | ||||||| | |||| |||||||||||||||| |||||||||    
T  18459307 acccacttgggttggtctagtggtaattggcttgggacttgggagtgtgctcctcct 18459251  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 23566385 - 23566345
Alignment:
Q  188 tttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||| |||||||||||| ||||||||| |||||||||||||    
T  23566385 tttgagacttgggagtgtgctcctcctaaaggtttcaggtt 23566345  T

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Target: scaffold0002 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 95044 - 94977
Alignment:
Q  161 ccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||| ||||||||| ||||| |||| || |||||||| ||||||||||||||| |||||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggtt 94977  T

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Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 6988 - 6925
Alignment:
Q  165 ttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||| ||||||||| ||||| |||||||| ||||||| |||||||||||| || |||||||    
T  6988 ttgggttggcctagtggtattggcttgggactggggagtgtgctcctcctcaaagtctcaggtt 6925  T

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Target: scaffold0258 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 15399 - 15329
Alignment:
Q  158 aacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||||| | || |||| ||||| ||||||| |||||||| |||||||||| |||| |||||||    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtt 15329  T

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Target: scaffold0238 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 5192 - 5263
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||||||| |||  |||||||  ||||| |||||||||||||||| ||||||||| || |||| |||||    
T  5192 aaacccacttgagttgtcctagtgtaattggcttgggacttgggagtgtgctcctccttaaagttttaggtt 5263  T

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Target: scaffold0172 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 32846 - 32781
Alignment:
Q  157 aaacccacttgggttagcctagtggcattggtttgggacttgggagtgcgctcctcctcaaggttt 222  Q
    ||||||||||||||| |||| |||| ||||| |  |||  |||| |||||||||||||||||||||    
T  32846 aaacccacttgggttggcctggtggtattggctgaggatctgggggtgcgctcctcctcaaggttt 32781  T

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Target: scaffold0126 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 25406 - 25353
Alignment:
Q  175 ctagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    ||||||| ||||| ||| |||||||||||| |||||| |||||||| |||||||    
T  25406 ctagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcaggtt 25353  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 18317 - 18369
Alignment:
Q  176 tagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggtt 228  Q
    |||||||||||| |||| |  ||||| || |||||||||||||||||||||||    
T  18317 tagtggcattggcttggaatctgggattgtgctcctcctcaaggtttcaggtt 18369  T

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