View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1763_low_119 (Length: 211)

Name: NF1763_low_119
Description: NF1763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1763_low_119
NF1763_low_119
[»] chr4 (49 HSPs)
chr4 (98-193)||(52880139-52880234)
chr4 (123-193)||(37109335-37109405)
chr4 (123-193)||(7292782-7292852)
chr4 (50-100)||(52880056-52880106)
chr4 (137-193)||(23377992-23378048)
chr4 (134-193)||(2185016-2185075)
chr4 (123-193)||(7949438-7949508)
chr4 (123-193)||(16581715-16581785)
chr4 (139-193)||(38869806-38869860)
chr4 (140-198)||(51969056-51969114)
chr4 (137-193)||(2622379-2622435)
chr4 (137-193)||(37274443-37274499)
chr4 (137-193)||(51622521-51622577)
chr4 (142-193)||(4249218-4249269)
chr4 (142-193)||(19531986-19532037)
chr4 (123-193)||(53496899-53496969)
chr4 (125-178)||(5450117-5450170)
chr4 (140-193)||(19680772-19680825)
chr4 (137-178)||(46329200-46329241)
chr4 (140-181)||(49576890-49576931)
chr4 (139-182)||(12798722-12798765)
chr4 (142-193)||(46295138-46295189)
chr4 (139-193)||(28635734-28635788)
chr4 (123-193)||(30938203-30938273)
chr4 (123-193)||(31759642-31759712)
chr4 (124-193)||(27372641-27372710)
chr4 (137-198)||(46545747-46545808)
chr4 (139-179)||(39509108-39509148)
chr4 (139-182)||(7539628-7539671)
chr4 (140-179)||(9936959-9936998)
chr4 (123-182)||(13265103-13265162)
chr4 (137-192)||(21404806-21404861)
chr4 (142-193)||(38838838-38838889)
chr4 (140-182)||(8030199-8030241)
chr4 (143-193)||(10048022-10048072)
chr4 (137-195)||(29195131-29195188)
chr4 (137-179)||(32992648-32992690)
chr4 (123-193)||(33632120-33632190)
chr4 (137-179)||(37720212-37720254)
chr4 (123-193)||(41683771-41683841)
chr4 (142-195)||(7093410-7093462)
chr4 (160-193)||(32942421-32942454)
chr4 (157-198)||(39343522-39343563)
chr4 (134-163)||(47202437-47202466)
chr4 (137-190)||(56409987-56410039)
chr4 (153-193)||(15180790-15180830)
chr4 (123-179)||(19238575-19238631)
chr4 (144-180)||(34661708-34661744)
chr4 (123-179)||(55427198-55427254)
[»] chr1 (55 HSPs)
chr1 (123-193)||(36371492-36371562)
chr1 (139-193)||(8177166-8177220)
chr1 (123-193)||(33700757-33700827)
chr1 (125-193)||(4566572-4566640)
chr1 (139-193)||(2799900-2799954)
chr1 (123-193)||(21547464-21547534)
chr1 (123-183)||(51703801-51703861)
chr1 (134-193)||(3265957-3266016)
chr1 (123-193)||(9165179-9165249)
chr1 (127-193)||(29056404-29056470)
chr1 (136-193)||(1247148-1247205)
chr1 (140-198)||(1600271-1600329)
chr1 (143-193)||(8904456-8904506)
chr1 (139-193)||(15786304-15786358)
chr1 (137-179)||(16169976-16170018)
chr1 (139-193)||(40810505-40810559)
chr1 (143-193)||(51814536-51814586)
chr1 (136-193)||(50919989-50920046)
chr1 (123-183)||(10526845-10526905)
chr1 (140-183)||(23566333-23566376)
chr1 (144-195)||(30203209-30203260)
chr1 (140-182)||(6122833-6122875)
chr1 (140-178)||(38947471-38947509)
chr1 (152-193)||(29753700-29753741)
chr1 (141-193)||(6650635-6650687)
chr1 (143-179)||(19528325-19528361)
chr1 (142-198)||(45266875-45266931)
chr1 (146-193)||(3799951-3799998)
chr1 (142-193)||(19940856-19940907)
chr1 (140-179)||(24047100-24047139)
chr1 (134-193)||(27567106-27567165)
chr1 (142-193)||(43446004-43446055)
chr1 (143-182)||(44961807-44961846)
chr1 (139-198)||(52336753-52336812)
chr1 (123-181)||(2219994-2220052)
chr1 (143-193)||(7219902-7219952)
chr1 (123-193)||(11063578-11063648)
chr1 (143-181)||(12587312-12587350)
chr1 (123-193)||(17745240-17745310)
chr1 (143-193)||(22049812-22049862)
chr1 (123-193)||(31383782-31383852)
chr1 (137-179)||(52029935-52029977)
chr1 (144-193)||(12662325-12662374)
chr1 (137-182)||(14787331-14787376)
chr1 (137-198)||(15904647-15904708)
chr1 (144-193)||(31605832-31605881)
chr1 (150-187)||(33981153-33981190)
chr1 (144-181)||(51281394-51281431)
chr1 (123-192)||(52116766-52116835)
chr1 (137-193)||(952547-952603)
chr1 (137-181)||(12370199-12370243)
chr1 (143-175)||(21392879-21392911)
chr1 (139-179)||(27223128-27223168)
chr1 (142-182)||(40814403-40814443)
chr1 (137-193)||(44126431-44126487)
[»] chr5 (38 HSPs)
chr5 (134-193)||(14285194-14285253)
chr5 (123-193)||(34984828-34984898)
chr5 (137-193)||(16773843-16773899)
chr5 (123-193)||(25627079-25627149)
chr5 (142-193)||(37258350-37258401)
chr5 (139-198)||(43442234-43442293)
chr5 (123-193)||(7918453-7918523)
chr5 (140-193)||(25979209-25979262)
chr5 (137-193)||(18595985-18596041)
chr5 (139-198)||(14495784-14495843)
chr5 (143-198)||(18437127-18437182)
chr5 (146-193)||(18974005-18974052)
chr5 (139-198)||(29075819-29075878)
chr5 (142-193)||(29173531-29173582)
chr5 (142-193)||(31074273-31074324)
chr5 (123-193)||(26078035-26078105)
chr5 (139-193)||(29692370-29692424)
chr5 (139-179)||(84862-84902)
chr5 (137-193)||(3315251-3315307)
chr5 (141-193)||(30000156-30000208)
chr5 (123-179)||(30883196-30883252)
chr5 (134-177)||(87423-87466)
chr5 (124-171)||(4793094-4793141)
chr5 (142-181)||(8779306-8779345)
chr5 (123-193)||(17155846-17155914)
chr5 (123-193)||(16457832-16457902)
chr5 (140-182)||(17028259-17028301)
chr5 (123-193)||(21549121-21549191)
chr5 (123-193)||(21589310-21589380)
chr5 (142-183)||(29210399-29210440)
chr5 (140-181)||(39327086-39327127)
chr5 (140-192)||(3252274-3252326)
chr5 (143-199)||(11375173-11375229)
chr5 (137-193)||(19373275-19373330)
chr5 (139-199)||(21086752-21086812)
chr5 (137-177)||(30109308-30109348)
chr5 (142-182)||(35796614-35796654)
chr5 (142-182)||(41730583-41730623)
[»] chr8 (43 HSPs)
chr8 (123-193)||(12988450-12988520)
chr8 (126-198)||(13129693-13129765)
chr8 (125-193)||(33017238-33017306)
chr8 (123-193)||(968384-968454)
chr8 (123-193)||(6536542-6536612)
chr8 (123-193)||(8794329-8794399)
chr8 (123-193)||(18540320-18540390)
chr8 (143-193)||(31408106-31408156)
chr8 (123-181)||(3624602-3624660)
chr8 (140-193)||(23361633-23361686)
chr8 (123-179)||(16852362-16852418)
chr8 (123-179)||(19703485-19703541)
chr8 (138-181)||(22193360-22193403)
chr8 (142-193)||(35287757-35287808)
chr8 (123-193)||(2203514-2203584)
chr8 (140-182)||(11819815-11819857)
chr8 (140-182)||(27750769-27750811)
chr8 (137-179)||(28783096-28783138)
chr8 (139-193)||(35690048-35690102)
chr8 (124-193)||(3305172-3305241)
chr8 (139-179)||(36205233-36205273)
chr8 (143-198)||(1372509-1372563)
chr8 (140-199)||(35583638-35583697)
chr8 (139-193)||(6569755-6569809)
chr8 (143-193)||(8059674-8059724)
chr8 (136-178)||(11928730-11928772)
chr8 (140-198)||(16843773-16843831)
chr8 (143-193)||(18897208-18897258)
chr8 (123-177)||(29858049-29858103)
chr8 (123-193)||(30774720-30774790)
chr8 (144-182)||(33727868-33727906)
chr8 (143-193)||(40872918-40872968)
chr8 (140-182)||(44780109-44780151)
chr8 (123-180)||(3058046-3058103)
chr8 (148-193)||(3174789-3174834)
chr8 (140-181)||(3721153-3721194)
chr8 (142-199)||(6436533-6436590)
chr8 (144-193)||(16585472-16585521)
chr8 (140-193)||(30483868-30483921)
chr8 (140-181)||(35641897-35641938)
chr8 (142-178)||(21566781-21566817)
chr8 (143-199)||(24675490-24675546)
chr8 (146-182)||(43594313-43594349)
[»] chr7 (60 HSPs)
chr7 (123-193)||(26459394-26459464)
chr7 (129-193)||(27313718-27313782)
chr7 (123-193)||(43215206-43215276)
chr7 (123-183)||(2962481-2962541)
chr7 (137-193)||(22760899-22760955)
chr7 (137-193)||(23552154-23552210)
chr7 (123-198)||(7721391-7721466)
chr7 (135-193)||(17113829-17113887)
chr7 (143-193)||(25655212-25655262)
chr7 (142-193)||(13106766-13106817)
chr7 (146-193)||(21558173-21558220)
chr7 (123-193)||(39631866-39631936)
chr7 (125-182)||(5830598-5830655)
chr7 (142-195)||(31835233-31835286)
chr7 (137-193)||(2882986-2883042)
chr7 (137-193)||(30579371-30579427)
chr7 (123-183)||(38851278-38851338)
chr7 (134-181)||(14058286-14058333)
chr7 (134-181)||(14368314-14368361)
chr7 (142-193)||(15137594-15137645)
chr7 (123-198)||(20335810-20335885)
chr7 (138-193)||(27376741-27376796)
chr7 (142-193)||(29385727-29385778)
chr7 (139-193)||(9183175-9183229)
chr7 (143-193)||(11700207-11700256)
chr7 (139-181)||(17041008-17041050)
chr7 (140-182)||(18363735-18363777)
chr7 (123-193)||(24438231-24438301)
chr7 (139-193)||(29785285-29785339)
chr7 (123-193)||(33222392-33222462)
chr7 (123-180)||(30442510-30442567)
chr7 (140-193)||(37162334-37162387)
chr7 (142-183)||(41519258-41519299)
chr7 (123-192)||(43590929-43590998)
chr7 (143-179)||(29916806-29916842)
chr7 (137-193)||(33869429-33869485)
chr7 (137-193)||(45976907-45976963)
chr7 (139-182)||(9608624-9608667)
chr7 (139-182)||(9836196-9836239)
chr7 (140-179)||(37085547-37085586)
chr7 (140-179)||(42711997-42712036)
chr7 (139-193)||(5934159-5934213)
chr7 (139-193)||(7744096-7744150)
chr7 (123-193)||(15905658-15905727)
chr7 (137-179)||(19553489-19553531)
chr7 (123-181)||(20952145-20952203)
chr7 (139-193)||(35119421-35119475)
chr7 (143-193)||(38374583-38374633)
chr7 (143-193)||(45709692-45709742)
chr7 (137-198)||(4566407-4566468)
chr7 (137-174)||(7801216-7801253)
chr7 (142-179)||(18056773-18056810)
chr7 (139-180)||(30217917-30217958)
chr7 (157-198)||(35828282-35828323)
chr7 (140-193)||(37117138-37117191)
chr7 (137-193)||(5579218-5579274)
chr7 (141-181)||(7309396-7309436)
chr7 (123-179)||(11720958-11721014)
chr7 (146-178)||(30301925-30301957)
chr7 (137-173)||(41703333-41703369)
[»] chr3 (56 HSPs)
chr3 (139-193)||(46518666-46518720)
chr3 (123-193)||(27093345-27093415)
chr3 (123-193)||(53412967-53413037)
chr3 (137-193)||(27259197-27259253)
chr3 (139-191)||(39253735-39253787)
chr3 (123-190)||(16354879-16354946)
chr3 (134-193)||(37788449-37788508)
chr3 (139-193)||(28703388-28703442)
chr3 (139-193)||(30311344-30311398)
chr3 (137-193)||(10445123-10445179)
chr3 (139-193)||(3427537-3427591)
chr3 (140-182)||(8075122-8075164)
chr3 (139-193)||(15048045-15048099)
chr3 (140-198)||(30715781-30715838)
chr3 (140-182)||(36720420-36720462)
chr3 (140-193)||(8796077-8796130)
chr3 (142-181)||(14186688-14186727)
chr3 (138-193)||(19154668-19154723)
chr3 (123-182)||(32651433-32651492)
chr3 (139-193)||(2709415-2709469)
chr3 (139-193)||(4222179-4222233)
chr3 (139-193)||(4844495-4844549)
chr3 (139-193)||(4870191-4870245)
chr3 (140-186)||(17108889-17108935)
chr3 (135-189)||(36010776-36010830)
chr3 (123-193)||(47236955-47237025)
chr3 (139-181)||(51766933-51766975)
chr3 (140-193)||(33899653-33899706)
chr3 (139-179)||(8501571-8501611)
chr3 (137-193)||(10828717-10828773)
chr3 (140-192)||(14339649-14339701)
chr3 (137-181)||(20501732-20501776)
chr3 (137-181)||(26481963-26482007)
chr3 (140-193)||(34062532-34062587)
chr3 (139-198)||(13808864-13808923)
chr3 (138-177)||(17765164-17765203)
chr3 (138-177)||(19066484-19066523)
chr3 (142-193)||(44069799-44069850)
chr3 (142-193)||(47454601-47454652)
chr3 (140-191)||(49494132-49494183)
chr3 (123-193)||(8170694-8170764)
chr3 (139-193)||(11612337-11612391)
chr3 (123-181)||(21960573-21960631)
chr3 (139-181)||(44743851-44743893)
chr3 (139-181)||(51903874-51903916)
chr3 (137-179)||(54990738-54990780)
chr3 (160-198)||(55287854-55287892)
chr3 (144-193)||(7973599-7973648)
chr3 (142-179)||(19716238-19716275)
chr3 (140-193)||(47810728-47810781)
chr3 (139-180)||(52769980-52770021)
chr3 (123-163)||(18319182-18319222)
chr3 (139-183)||(31608518-31608562)
chr3 (139-183)||(31788964-31789008)
chr3 (137-193)||(34928925-34928981)
chr3 (140-172)||(49452912-49452944)
[»] chr2 (48 HSPs)
chr2 (123-193)||(42922436-42922507)
chr2 (123-179)||(29503293-29503349)
chr2 (142-193)||(13803536-13803587)
chr2 (134-193)||(40416374-40416433)
chr2 (123-193)||(42327379-42327449)
chr2 (137-193)||(19244145-19244201)
chr2 (123-198)||(16918557-16918632)
chr2 (123-193)||(4060198-4060268)
chr2 (139-193)||(14500315-14500369)
chr2 (123-193)||(19322790-19322860)
chr2 (140-193)||(21303978-21304031)
chr2 (137-181)||(4262298-4262342)
chr2 (134-182)||(21195671-21195719)
chr2 (123-179)||(37480097-37480153)
chr2 (142-193)||(45026784-45026835)
chr2 (142-192)||(10449063-10449113)
chr2 (123-193)||(11251109-11251179)
chr2 (139-193)||(25637189-25637243)
chr2 (123-193)||(30410533-30410603)
chr2 (143-193)||(34041572-34041622)
chr2 (137-179)||(39715028-39715070)
chr2 (123-193)||(42602576-42602646)
chr2 (125-182)||(11062384-11062441)
chr2 (140-193)||(33839244-33839297)
chr2 (150-186)||(4226111-4226147)
chr2 (123-195)||(17737606-17737678)
chr2 (123-179)||(23052521-23052577)
chr2 (137-193)||(33582009-33582065)
chr2 (123-194)||(1729838-1729909)
chr2 (137-180)||(27244344-27244387)
chr2 (140-182)||(6859307-6859349)
chr2 (123-177)||(12086129-12086183)
chr2 (123-193)||(21213791-21213861)
chr2 (139-181)||(23230601-23230643)
chr2 (123-193)||(37755955-37756025)
chr2 (144-193)||(2750610-2750659)
chr2 (125-182)||(6658406-6658463)
chr2 (143-180)||(7599978-7600015)
chr2 (142-191)||(8192466-8192514)
chr2 (143-184)||(11738037-11738078)
chr2 (144-193)||(33569842-33569891)
chr2 (142-198)||(727619-727675)
chr2 (160-192)||(9318060-9318092)
chr2 (146-182)||(12497777-12497813)
chr2 (137-177)||(12994376-12994416)
chr2 (137-193)||(28846727-28846783)
chr2 (137-193)||(41908622-41908678)
chr2 (137-177)||(42860384-42860424)
[»] scaffold0258 (1 HSPs)
scaffold0258 (123-193)||(15307-15377)
[»] scaffold0002 (1 HSPs)
scaffold0002 (123-193)||(94955-95025)
[»] chr6 (34 HSPs)
chr6 (123-193)||(12188287-12188357)
chr6 (123-193)||(33549126-33549196)
chr6 (137-186)||(17328255-17328304)
chr6 (138-193)||(11306158-11306213)
chr6 (142-193)||(20863416-20863467)
chr6 (137-180)||(23910108-23910151)
chr6 (134-193)||(27989641-27989700)
chr6 (123-198)||(28363959-28364034)
chr6 (123-177)||(10338174-10338228)
chr6 (140-197)||(3779378-3779435)
chr6 (140-193)||(15951286-15951339)
chr6 (137-182)||(20213077-20213122)
chr6 (137-182)||(22107100-22107145)
chr6 (137-181)||(6385898-6385942)
chr6 (137-193)||(6691535-6691590)
chr6 (137-193)||(14278095-14278151)
chr6 (139-179)||(24641188-24641228)
chr6 (142-181)||(28841455-28841494)
chr6 (140-190)||(1056672-1056722)
chr6 (145-195)||(3907578-3907627)
chr6 (135-193)||(13330121-13330179)
chr6 (125-179)||(16405109-16405163)
chr6 (143-193)||(16535226-16535276)
chr6 (134-180)||(19638001-19638047)
chr6 (154-188)||(26857259-26857293)
chr6 (139-193)||(30127438-30127492)
chr6 (136-193)||(4105086-4105143)
chr6 (144-193)||(11103419-11103468)
chr6 (123-180)||(12216766-12216823)
chr6 (140-177)||(14199947-14199984)
chr6 (137-181)||(12234503-12234547)
chr6 (141-181)||(19162823-19162863)
chr6 (123-171)||(31622997-31623045)
chr6 (143-179)||(34444845-34444881)
[»] scaffold0180 (1 HSPs)
scaffold0180 (123-183)||(19956-20016)
[»] scaffold0004 (1 HSPs)
scaffold0004 (125-193)||(81548-81616)
[»] scaffold0006 (1 HSPs)
scaffold0006 (134-193)||(18332-18391)
[»] scaffold0194 (1 HSPs)
scaffold0194 (139-193)||(13030-13084)
[»] scaffold0238 (2 HSPs)
scaffold0238 (142-193)||(2695-2746)
scaffold0238 (140-183)||(5232-5275)
[»] scaffold0299 (1 HSPs)
scaffold0299 (139-183)||(11566-11610)
[»] scaffold0291 (1 HSPs)
scaffold0291 (139-179)||(2468-2508)
[»] scaffold0063 (1 HSPs)
scaffold0063 (123-193)||(35373-35443)
[»] scaffold0126 (1 HSPs)
scaffold0126 (140-193)||(25331-25384)
[»] scaffold0211 (1 HSPs)
scaffold0211 (142-193)||(24094-24145)
[»] scaffold0070 (1 HSPs)
scaffold0070 (134-193)||(42504-42563)
[»] scaffold0118 (1 HSPs)
scaffold0118 (143-193)||(41617-41667)
[»] scaffold0102 (1 HSPs)
scaffold0102 (143-193)||(17104-17154)


Alignment Details
Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 52880139 - 52880234
Alignment:
Q  98 taagtaaatagtaataattaaagggggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||| |||||||||||||||||||||||||| |||||||| ||| ||||||| ||||||||||||| || || |||||||||||||||||||||    
T  52880139 taagtagatagtaataattaaagggggtattggctaggaacccgggggtgtgcttctcctcaaggttttagatttgattctctctgatgccaattt 52880234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 37109405 - 37109335
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  37109405 ggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 37109335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 7292852 - 7292782
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | ||||||||||||||||||||||||||| || ||||||||||||||||||  |||||||||    
T  7292852 ggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctctagtgccaattt 7292782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 52880056 - 52880106
Alignment:
Q  50 ggagaaatttaaacaaagttgatatctgaacacaaaattttgatattataa 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  52880056 ggagaaattcaaacaaagttgatatctgaacacaaaattttgatattataa 52880106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 23377992 - 23378048
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  23377992 acctgggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaattt 23378048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 2185075 - 2185016
Alignment:
Q  134 ggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||||||    
T  2185075 ggaacctgggagtgtgctccttctcaaagtctcaggttcgattctctccgatgccaattt 2185016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 7949508 - 7949438
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||| |||||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  7949508 ggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 7949438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 16581715 - 16581785
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | ||||||||||||| |||||||||||||||| |||||||| ||| |||||| |||||||||    
T  16581715 ggtattggcttggaacctgggagtctgctcctcctcaaggtctcaggttctattatctctggtgccaattt 16581785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 38869806 - 38869860
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||    
T  38869806 ctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaattt 38869860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 51969056 - 51969114
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    |||||||||||||||||||||||||||||||||  ||||||||| ||||||||| ||||    
T  51969056 tgggagtgtgctcctcctcaaggtttcaggttcatttctctctggtgccaatttggatg 51969114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 2622435 - 2622379
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| | || ||||||||||||||||||| |||||||||    
T  2622435 acctgggagtgtgctcctcctccatgtctcaggttcgattctctctggtgccaattt 2622379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 37274499 - 37274443
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||| ||| |||||    
T  37274499 acctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaattt 37274443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 51622521 - 51622577
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||| |||||||||    
T  51622521 accttggagtgtgctcctcctcaaggtctcaggttcgactctctctggtgccaattt 51622577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 4249218 - 4249269
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  4249218 ggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaattt 4249269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 19532037 - 19531986
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  19532037 ggagcgtgctcctccttaagttttcaggttcgattctctctgatgccaattt 19531986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 53496899 - 53496969
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||| || |||||||||||||||||||||||| || |||| || |||||||||||  ||||||||    
T  53496899 ggtattggtttgggacctgggagtgtgctcctcctcaaagtctcagatttgattctctctggagccaattt 53496969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 5450117 - 5450170
Alignment:
Q  125 tattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattct 178  Q
    |||||| | |||| |||||||||||||||||||||||||||||| |||||||||    
T  5450117 tattggcttggaatctgggagtgtgctcctcctcaaggtttcagattcgattct 5450170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 19680825 - 19680772
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||| |||||||||| | ||||||||||||||||| |||||||||    
T  19680825 tgggagtgtgctcttcctcaaggtcttaggttcgattctctctggtgccaattt 19680772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 178
Target Start/End: Original strand, 46329200 - 46329241
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattct 178  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  46329200 acctgggagtgtgctcctcctcaaggtatcaggttcgattct 46329241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 49576931 - 49576890
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  49576931 tgggagtgtgctcctcctcaaggtctcaggttcgattctctc 49576890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 12798722 - 12798765
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    ||||||||||||| |||||| |||||||||||||||||||||||    
T  12798722 ctgggagtgtgctgctcctcgaggtttcaggttcgattctctct 12798765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 46295138 - 46295189
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| ||||||||||||||| | | |||||||||    
T  46295138 ggagtgtgctcctcctcaaggtctcaggttcgattctccccggtgccaattt 46295189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 28635734 - 28635788
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||  |||| | ||||||||||||||||| |||||||||    
T  28635734 ctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaattt 28635788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 30938273 - 30938203
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||| || | || ||||||||||||||||| |||| ||||||||||||||| |  ||||||||||    
T  30938273 ggtattggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaattt 30938203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 31759712 - 31759642
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || || |||||||||||||||||||||||| |||| ||||||||| |||| | |||||||    
T  31759712 ggtattggcttgggacttgggagtgtgctcctcctcaaggtctcagattcgattctttctggtaccaattt 31759642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 27372710 - 27372641
Alignment:
Q  124 gtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||| | ||| ||||| |||||||||| | ||||| | |||||||||| ||||||||||||||||    
T  27372710 gtattggtttgaaacttgggaatgtgctcctctttaaggtcttaggttcgattatctctgatgccaattt 27372641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 46545747 - 46545808
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    ||||| ||||||||||||||||||| | |||| ||||||| ||||||||| |||||| ||||    
T  46545747 acctgagagtgtgctcctcctcaagatctcagattcgattttctctgatgtcaatttagatg 46545808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 39509108 - 39509148
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  39509108 ctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39509148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 7539628 - 7539671
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||    
T  7539628 ctgggagtatgctccttctcaaggtctcaggttcgattctctct 7539671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 9936998 - 9936959
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  9936998 tgggagtgtgctcctcctcgaagtttcaggttcgattctc 9936959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 13265162 - 13265103
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||| | || |||||||| |||||||||||| | |||||||| |||||||||||||    
T  13265162 ggtattggcttgggacctgggaatgtgctcctccttatggtttcagattcgattctctct 13265103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 192
Target Start/End: Complemental strand, 21404861 - 21404806
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaatt 192  Q
    ||||| |||| |||||||||||||||| ||| ||| ||||||||||||| ||||||    
T  21404861 acctgagagtatgctcctcctcaaggtctcatgtttgattctctctgataccaatt 21404806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 38838838 - 38838889
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||| |||||||||||||||| | ||||||||||||||| |||| ||||||    
T  38838838 ggagtatgctcctcctcaaggtcttaggttcgattctctccgatggcaattt 38838889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 8030241 - 8030199
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||    
T  8030241 tgggagtgtgctcctcctcaaggtctcaagttcgattccctct 8030199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 10048022 - 10048072
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| ||||||| |||| ||| ||||||||||||||||||||||| |||||    
T  10048022 gagtatgctccttctcatggtctcaggttcgattctctctgatgctaattt 10048072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 29195131 - 29195188
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttg 195  Q
    |||| |||||||||||||| |||||||  || |||||||||||||| ||||||||||||    
T  29195131 accttggagtgtgctcctc-tcaaggtcgcaagttcgattctctctaatgccaattttg 29195188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 32992648 - 32992690
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||| |||||||||||||||||||||| ||| |||||||||||    
T  32992648 accttggagtgtgctcctcctcaaggtctcaagttcgattctc 32992690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 33632190 - 33632120
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | ||||  ||||||| ||||||||||||||||  |||| ||||||||||||| || ||||||    
T  33632190 ggtattggcttggaatatgggagtatgctcctcctcaaggtcccaggatcgattctctctggtgtcaattt 33632120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 37720254 - 37720212
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||||||||| ||||||||||||  ||||||||||||||    
T  37720254 acctgggagtgtgcccctcctcaaggtcccaggttcgattctc 37720212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 41683771 - 41683841
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | |||||||| |||||||||||| ||||| |||||| |||| ||||| |||  |||||||||    
T  41683771 ggtattggcttggaacctgagagtgtgctccttctcaaagtttcacgttcaattctttctagtgccaattt 41683841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 7093410 - 7093462
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttg 195  Q
    |||||||||||||  ||||||||| ||||||||||||||||| ||| |||||||    
T  7093410 ggagtgtgctcctt-tcaaggttttaggttcgattctctctggtgcaaattttg 7093462  T

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Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 32942421 - 32942454
Alignment:
Q  160 aggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||| |||||||||||||||||||||||||||    
T  32942421 aggtttaaggttcgattctctctgatgccaattt 32942454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 39343522 - 39343563
Alignment:
Q  157 tcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    |||| |||||||||||||||||||||| || |||||||||||    
T  39343522 tcaaagtttcaggttcgattctctctggtgtcaattttgatg 39343563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 163
Target Start/End: Complemental strand, 47202466 - 47202437
Alignment:
Q  134 ggaacctgggagtgtgctcctcctcaaggt 163  Q
    ||||||||||||||||||||||||||||||    
T  47202466 ggaacctgggagtgtgctcctcctcaaggt 47202437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 56409987 - 56410039
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaa 190  Q
    |||| |||||||||||||| ||||||| ||||||||||||||| ||| ||||||    
T  56409987 accttggagtgtgctcctc-tcaaggtctcaggttcgattctccctggtgccaa 56410039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 15180790 - 15180830
Alignment:
Q  153 ctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||| | ||||||||||||||||| |||||||||    
T  15180790 ctcctcaaggtcttaggttcgattctctctggtgccaattt 15180830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 19238631 - 19238575
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||| | || || ||||||||||||||||||| |||| || ||||||||||||    
T  19238631 ggtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctc 19238575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 34661708 - 34661744
Alignment:
Q  144 agtgtgctcctcctcaaggtttcaggttcgattctct 180  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  34661708 agtgtgctcctcttcaaggttttaggttcgattctct 34661744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 55427254 - 55427198
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||| | || |||||||||| ||||||| ||| |||| |||||||||||||||    
T  55427254 ggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctc 55427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 9e-23; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 36371492 - 36371562
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  36371492 ggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctctgatgccaattt 36371562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 8177220 - 8177166
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8177220 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaattt 8177166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 33700827 - 33700757
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | |||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  33700827 ggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 33700757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 4566572 - 4566640
Alignment:
Q  125 tattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||| | |||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||    
T  4566572 tattggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctctctgatgtcaattt 4566640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 2799900 - 2799954
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  2799900 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 2799954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 21547534 - 21547464
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || || |||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  21547534 ggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctgatgccaattt 21547464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 51703801 - 51703861
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctg 183  Q
    |||||||| | |||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  51703801 ggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgattctctctg 51703861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 3265957 - 3266016
Alignment:
Q  134 ggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||| | |||||||    
T  3265957 ggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctggttccaattt 3266016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 9165249 - 9165179
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||||||||||||||||||||||| || |||||||| |||||||||| |||||||||    
T  9165249 ggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctctggtgccaattt 9165179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 29056404 - 29056470
Alignment:
Q  127 ttggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||| || |||||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||    
T  29056404 ttggtttgggacctgggagtgtgctcatcctgaagttttcaggttcgattatctctgatgccaattt 29056470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 1247148 - 1247205
Alignment:
Q  136 aacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||| | |||||||    
T  1247148 aacctgggagtgtactcctcctcaaggtctcaggttcgattctctctggtaccaattt 1247205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 1600329 - 1600271
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    |||||||||||||||||| || |||||||||||||||||||||| || |||||| ||||    
T  1600329 tgggagtgtgctcctccttaaagtttcaggttcgattctctctggtgtcaatttggatg 1600271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 8904456 - 8904506
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||| ||| ||||||||||||||| |||||||||    
T  8904456 gagtgtgctcctcctcaaggtctcaagttcgattctctctggtgccaattt 8904506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 15786358 - 15786304
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||||||| |||||||||||||||| || || ||||||    
T  15786358 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgtcaattt 15786304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 16170018 - 16169976
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  16170018 acctgggagtgtgttcctcctcaaggtttcaggttcgattctc 16169976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 40810505 - 40810559
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||| |||||||||    
T  40810505 ctgggagtgtgttcctcttcaaggtctcaggttcgattctctctggtgccaattt 40810559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 51814536 - 51814586
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||| ||||||||||||||||| | |||||||||    
T  51814536 gagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaattt 51814586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 50919989 - 50920046
Alignment:
Q  136 aacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||| |||||||||| |||| ||||||||||||||||||||||||| || ||||||    
T  50919989 aacctgagagtgtgctcatccttaaggtttcaggttcgattctctctggtgtcaattt 50920046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 10526845 - 10526905
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctg 183  Q
    |||||||| | || |||||||||| |||||||||||||||| |||| ||||||||||||||    
T  10526845 ggtattggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctctg 10526905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 23566376 - 23566333
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctg 183  Q
    |||||||||||||||||| |||||||||||||| ||||||||||    
T  23566376 tgggagtgtgctcctcctaaaggtttcaggttctattctctctg 23566333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 30203260 - 30203209
Alignment:
Q  144 agtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttg 195  Q
    ||||| |||||||||||||| |||||||| |||||||| |||||||||||||    
T  30203260 agtgttctcctcctcaaggtctcaggttcaattctctccgatgccaattttg 30203209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 6122833 - 6122875
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  6122833 tgggagtgtgctcctcctcaaggtctcaggttcgattccctct 6122875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 38947509 - 38947471
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattct 178  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  38947509 tgggagtgtgctcctcctcaaggtctcaggttcgattct 38947471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 29753700 - 29753741
Alignment:
Q  152 cctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||| ||||||||||||||||||| |||||||||    
T  29753700 cctcctcaaggtctcaggttcgattctctctggtgccaattt 29753741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 6650635 - 6650687
Alignment:
Q  141 gggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||| ||||||||||||| || ||||||||||||||||||| || ||||||    
T  6650635 gggagtatgctcctcctcaatgtctcaggttcgattctctctggtgtcaattt 6650687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 19528361 - 19528325
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    ||||||||||||||||||||| |||||||||||||||    
T  19528361 gagtgtgctcctcctcaaggtctcaggttcgattctc 19528325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 45266875 - 45266931
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    ||||| |||||||||||||||| ||||||||||||||| | | ||||||||| ||||    
T  45266875 ggagtttgctcctcctcaaggtctcaggttcgattctccccggtgccaatttggatg 45266931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 3799951 - 3799998
Alignment:
Q  146 tgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||| | |||||||||||||||||||||  |||||||||    
T  3799951 tgtgctcctcctcgaagtttcaggttcgattctctctagtgccaattt 3799998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 19940907 - 19940856
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||| ||||| ||||||| ||||||||| | |||||||||    
T  19940907 ggagtgtgctcctccttaaggtctcaggtttgattctctccggtgccaattt 19940856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 24047139 - 24047100
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  24047139 tgggagtgtgctcctcctcgaggtttcaagttcgattctc 24047100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 27567165 - 27567106
Alignment:
Q  134 ggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| ||||||||||||| ||||||| |||| ||||||| ||||| |||| |||||    
T  27567165 ggaacctgagagtgtgctcctcttcaaggtctcagattcgattttctctaatgctaattt 27567106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 43446004 - 43446055
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| ||| ||||||||||| | | |||||||||    
T  43446004 ggagtgtgctcctcctcaaggtctcatgttcgattctccccggtgccaattt 43446055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 182
Target Start/End: Original strand, 44961807 - 44961846
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  44961807 gagtgtgctcctcctcagggtctcaggttcgattctctct 44961846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 52336812 - 52336753
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    ||||||||||||||||||| ||| | |||||||||||| |||||| || |||||| ||||    
T  52336812 ctgggagtgtgctcctccttaagatctcaggttcgattatctctggtgtcaatttggatg 52336753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 2219994 - 2220052
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||| | ||||||||  |||||||| |||||| |||| |||||||||||||||||    
T  2219994 ggtattggcttggaacctgaaagtgtgcttctcctcgaggtctcaggttcgattctctc 2220052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 7219952 - 7219902
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||| | || |||||||||||||||| |||| |||||||    
T  7219952 gagtgtgctcctcctcgaagtctcaggttcgattctctttgataccaattt 7219902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 11063578 - 11063648
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||||  |||||| ||||||||||||| | ||||||||||||||||  |||||||||    
T  11063578 ggtattggcttgggacctgaaagtgtgttcctcctcaaggtcttaggttcgattctctctagtgccaattt 11063648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 181
Target Start/End: Original strand, 12587312 - 12587350
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  12587312 gagtgtgctcctcctcgaggtctcaggttcgattctctc 12587350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 17745310 - 17745240
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || ||||| | |||||||||||||| |||| ||| ||||||||||||||| || ||||||    
T  17745310 ggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctggtgtcaattt 17745240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 22049862 - 22049812
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||| ||||||||||||| || |||||||||||||| || ||||||    
T  22049862 gagtgtgcttctcctcaaggtttgagattcgattctctctggtgtcaattt 22049812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 31383852 - 31383782
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||||||||||||||||||||   ||| ||||||||||||||||  | |||||||||    
T  31383852 ggtattggcttgggacctgggagtgtgctcctccttggggtctcaggttcgattctcttaggtgccaattt 31383782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 52029977 - 52029935
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||| ||||||||||||| |||||||| |||||||||||||||    
T  52029977 acctaggagtgtgctccttctcaaggtctcaggttcgattctc 52029935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 12662325 - 12662374
Alignment:
Q  144 agtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||| | || |||||||||||| ||||| ||||||||||    
T  12662325 agtgtgctcctcctcgatgtctcaggttcgattatctctaatgccaattt 12662374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 14787376 - 14787331
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    ||||| ||||||| | ||||||||||| ||||||||||||||||||    
T  14787376 acctgagagtgtgtttctcctcaaggtgtcaggttcgattctctct 14787331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 15904647 - 15904708
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    |||||||||| | |||||||||||  | |||| ||||||||||||||||| |||||| ||||    
T  15904647 acctgggagtatcctcctcctcaaaatctcagattcgattctctctgatgtcaatttggatg 15904708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 31605881 - 31605832
Alignment:
Q  144 agtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||| ||| ||||||||||| | | |||||||||    
T  31605881 agtgtgctcctcctcaaggtctcaagttcgattctccccggtgccaattt 31605832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 33981190 - 33981153
Alignment:
Q  150 ctcctcctcaaggtttcaggttcgattctctctgatgc 187  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  33981190 ctcctcctcaagaattcaggttcgattctctctgatgc 33981153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 51281394 - 51281431
Alignment:
Q  144 agtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  51281394 agtgtgctcctcctcaaggtctcaggtttgattctctc 51281431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 52116835 - 52116766
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaatt 192  Q
    |||||||| | || || ||||||||||||||||||||| || |||||||| |||||| ||  ||||||||    
T  52116835 ggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcaattctccctagtgccaatt 52116766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 952547 - 952603
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||| ||||||| || ||||||| ||||||| | |||| ||||||    
T  952547 acctgggagtgtgctcatcctcaaagtctcaggttagattctccccgatgtcaattt 952603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 12370199 - 12370243
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||||||||||||||||| |||| ||| ||| |||||||||    
T  12370199 acctgggagtgtgctcctcctcgaggtctcatgtttgattctctc 12370243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 21392879 - 21392911
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgat 175  Q
    ||||||||||||||||||||| |||||||||||    
T  21392879 gagtgtgctcctcctcaaggtctcaggttcgat 21392911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 27223168 - 27223128
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||||||||| || ||||||| |||||||||||||||    
T  27223168 ctgggagtgtgctcttcttcaaggtctcaggttcgattctc 27223128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 40814443 - 40814403
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    ||||||||||| ||||  |||||||||||||||||||||||    
T  40814443 ggagtgtgctcatccttgaggtttcaggttcgattctctct 40814403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 44126431 - 44126487
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||| | |||| |||| || ||||||||||  |||||||||    
T  44126431 acctgggagtgtgctcctccacgaggtctcagatttgattctctctagtgccaattt 44126487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 5e-21; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 14285194 - 14285253
Alignment:
Q  134 ggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  14285194 ggaacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 14285253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 34984828 - 34984898
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | |||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||    
T  34984828 ggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgccaattt 34984898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 16773843 - 16773899
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  16773843 acctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaattt 16773899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 25627079 - 25627149
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | ||||| |||||||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  25627079 ggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 25627149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 37258401 - 37258350
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  37258401 ggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgtcaattt 37258350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 43442234 - 43442293
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || |||||| ||||    
T  43442234 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctctgttgtcaatttggatg 43442293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 7918523 - 7918453
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | ||||||||||||||  |||||||||||||| | ||||||||||||||||| |||||||||    
T  7918523 ggtattggcttggaacctgggagtgcactcctcctcaaggtcttaggttcgattctctctggtgccaattt 7918453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 25979209 - 25979262
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||| |||||||||||||| |||||||||||||||||| ||| ||||||    
T  25979209 tgggagtgttctcctcctcaaggtctcaggttcgattctctcttatgtcaattt 25979262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 18596041 - 18595985
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| |||||||||||||||||| | |||||||||| |||||| |||||||||    
T  18596041 acctgggaatgtgctcctcctcaaggtcttaggttcgattttctctggtgccaattt 18595985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 14495843 - 14495784
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    |||||||||||||||||||| |||| |||| || ||||||||| ||||||||||| ||||    
T  14495843 ctgggagtgtgctcctcctcgaggtctcagatttgattctctccgatgccaatttagatg 14495784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 198
Target Start/End: Original strand, 18437127 - 18437182
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    |||||||||||||||||| ||||| |||||||||||||||  ||||||||| ||||    
T  18437127 gagtgtgctcctcctcaaagtttcgggttcgattctctctagtgccaatttagatg 18437182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 18974005 - 18974052
Alignment:
Q  146 tgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  18974005 tgtgctcctcctcaaggtgtcaggttcgattctccctggtgccaattt 18974052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 29075819 - 29075878
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    |||||||||||||||||||| || | ||| ||||||||||||||| ||||||||| ||||    
T  29075819 ctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaatttagatg 29075878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 29173531 - 29173582
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||| ||||||||||||||||| |||||| || ||||||    
T  29173531 ggagtgtgctcctcctcgaggtttcaggttcgattatctctggtgtcaattt 29173582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 31074273 - 31074324
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| ||||||||||| | ||||||||||||||||||| |||||||||    
T  31074273 ggagtgtgttcctcctcaagatctcaggttcgattctctctggtgccaattt 31074324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 26078105 - 26078035
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||| || || ||||||| |||| ||| ||||||| ||||||||||||||||||  |||||||||    
T  26078105 ggtattggtttgggacttgggagtatgcttctcttcaaggtctcaggttcgattctctctagtgccaattt 26078035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 29692424 - 29692370
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| || |||||||  |||||||| |||||||||||    
T  29692424 ctgggagtgtgctcctcctcaaagtctcaggtttaattctctccgatgccaattt 29692370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 84862 - 84902
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    ||||||||||||||||||||||||| ||| |||||||||||    
T  84862 ctgggagtgtgctcctcctcaaggtctcaagttcgattctc 84902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 3315251 - 3315307
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| |||||| ||||||||||||||| ||||||||||||||| | | |||||||||    
T  3315251 accttggagtgcgctcctcctcaaggtctcaggttcgattctcccaggtgccaattt 3315307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 30000156 - 30000208
Alignment:
Q  141 gggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||| ||| ||||||| |||| |||||||||| ||||||||||||||||||    
T  30000156 gggagtatgcacctcctcgaggtctcaggttcgactctctctgatgccaattt 30000208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 30883252 - 30883196
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||| | || ||||||||||||||||||||||||||| ||| |||| ||||||    
T  30883252 ggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctc 30883196  T

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Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 87466 - 87423
Alignment:
Q  134 ggaacctgggagtgtgctcctcctcaaggtttcaggttcgattc 177  Q
    |||| ||||||||||||||||||||||||| ||||||| |||||    
T  87466 ggaatctgggagtgtgctcctcctcaaggtctcaggtttgattc 87423  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 4793141 - 4793094
Alignment:
Q  124 gtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggtt 171  Q
    ||||||||| || |||||||||||||||||||||| |||| |||||||    
T  4793141 gtattggtttgggacctgggagtgtgctcctcctcgaggtctcaggtt 4793094  T

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Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 8779345 - 8779306
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  8779345 ggagtgtgctcctcctcgaggtttcaggttcgattatctc 8779306  T

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Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 17155846 - 17155914
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||| || ||||| |||||  |||||||||||||| ||||||| |||||||| || |||||||||    
T  17155846 ggtattggtttgggacctgagagtg--ctcctcctcaaggtctcaggtttgattctctgtgctgccaattt 17155914  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 16457832 - 16457902
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||| |||||||||||||||||||||| ||| |||| |||||| | | |||||||||    
T  16457832 ggtattggcttgggaccttggagtgtgctcctcctcaaggtctcatgttcaattctccccggtgccaattt 16457902  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 17028301 - 17028259
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||    
T  17028301 tgggagtgtgctcctcctcaaggtctcaggtttgattccctct 17028259  T

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Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 21549191 - 21549121
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || ||||||||||||||||||||| || || ||| |||||||| |||||  |||||||||    
T  21549191 ggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttctctagtgccaattt 21549121  T

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Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 21589310 - 21589380
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||||||||| |||| |||||| | || ||||||||||||| ||||| |||||||||    
T  21589310 ggtattggcttgggacctgggagtctgctactcctcgatgtctcaggttcgattccctctggtgccaattt 21589380  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 29210399 - 29210440
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctg 183  Q
    ||||||||||||||||| |||||||| |||| ||||||||||    
T  29210399 ggagtgtgctcctcctcgaggtttcaagttcaattctctctg 29210440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 39327127 - 39327086
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  39327127 tgggagtgtgctcctcctcaaggtcttagcttcgattctctc 39327086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 3252326 - 3252274
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaatt 192  Q
    ||||||||  ||| |||||| | | ||||||||||||||||||||||||||||    
T  3252326 tgggagtgcactcttcctcaggctctcaggttcgattctctctgatgccaatt 3252274  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 11375229 - 11375173
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatga 199  Q
    ||||||| |||||||||| || ||| ||||||||||||| |||| |||||| |||||    
T  11375229 gagtgtgttcctcctcaatgtctcaagttcgattctctccgatgtcaatttggatga 11375173  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 19373275 - 19373330
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| |||||||||| ||| ||||||||| |||||||||||| ||||||| ||||||    
T  19373275 accttggagtgtgctactc-tcaaggttttaggttcgattctatctgatgtcaattt 19373330  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 21086752 - 21086812
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatga 199  Q
    |||| |||||||||||||||||| | |||| ||||||| |||||| || |||||| |||||    
T  21086752 ctggcagtgtgctcctcctcaagatctcagattcgattatctctggtgtcaatttagatga 21086812  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 30109348 - 30109308
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattc 177  Q
    |||||||||||||||||||||  |||| |||||||||||||    
T  30109348 acctgggagtgtgctcctccttgaggtctcaggttcgattc 30109308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 35796654 - 35796614
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||||||||||| | ||||||||||||||| ||||    
T  35796654 ggagtgtgctcctcctcatgatttcaggttcgattccctct 35796614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 41730583 - 41730623
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||||| ||||||||| ||| ||||||||||||||    
T  41730583 ggagtgtgctccacctcaaggtatcatgttcgattctctct 41730623  T

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Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 12988450 - 12988520
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | ||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  12988450 ggtattggcttggaacctggaagtgtgctcctcctcaaggtttcaggttcgatcctctctggtgccaattt 12988520  T

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Target: chr8; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 13129693 - 13129765
Alignment:
Q  126 attggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    ||||||| || || |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  13129693 attggtttgggacttgggagtgcgctcctcctcaaggtttcaggttcgattctctctggtgccaatttggatg 13129765  T

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Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 33017238 - 33017306
Alignment:
Q  125 tattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||| | ||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  33017238 tattggcttggaacctggaagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 33017306  T

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Target: chr8; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 968384 - 968454
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||    
T  968384 ggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaattt 968454  T

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Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 6536542 - 6536612
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||| |||||||||||||||||||||| |||||||| |||||||||| |||||||||    
T  6536542 ggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaattt 6536612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 8794399 - 8794329
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | ||||||||| |||||||||||||||| ||| ||||||||||||||||||| | |||||||    
T  8794399 ggtattggcttggaacctggaagtgtgctcctcctcagggtctcaggttcgattctctctggtaccaattt 8794329  T

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Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 18540320 - 18540390
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||||||||||| || ||||||||||| ||||||||||||||||||| |||||||||    
T  18540320 ggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaattt 18540390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 31408156 - 31408106
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  31408156 gagtgtgctcctcctcaaggtttcaggttcgattctctctaatgtcaattt 31408106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 3624602 - 3624660
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||| | || ||||||||||||||||||| ||||||| |||||||||||||||||    
T  3624602 ggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 3624660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 23361686 - 23361633
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||||| |||||||| |||||||||| || ||||||    
T  23361686 tgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaattt 23361633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 16852362 - 16852418
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||| | || |||||||||||||||||||||| |||| |||||||||||||||    
T  16852362 ggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 16852418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 19703541 - 19703485
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||| | || ||||| ||||||||||||||||||||| |||||||||||||||    
T  19703541 ggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 19703485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 22193403 - 22193360
Alignment:
Q  138 cctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||||||||||||||||||||| | |||||||||||||||    
T  22193403 cctgggagtgtgctcctcctcaaggtcttaggttcgattctctc 22193360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 35287757 - 35287808
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| ||| ||||||||||||| | |||||||||    
T  35287757 ggagtgtgctcctcctcaaggtatcatgttcgattctctccggtgccaattt 35287808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 2203514 - 2203584
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || ||||||||||||||||||||||||||| ||||| || |||||| | | |||||||||    
T  2203514 ggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaattt 2203584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 11819815 - 11819857
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  11819815 tgggagtgtgctcctcctcaaggtctcaggttcgattcactct 11819857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 27750769 - 27750811
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  27750769 tgggagtgtgctcctcctcaaggtctcaggttcgattccctct 27750811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 28783096 - 28783138
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    ||||||||||||||||||||||||||| ||| |||||||||||    
T  28783096 acctgggagtgtgctcctcctcaaggtctcatgttcgattctc 28783138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 35690102 - 35690048
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||| || |||||||||||||||| ||||||||||||||||||| || ||||||    
T  35690102 ctgggtgtttgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 35690048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 193
Target Start/End: Complemental strand, 3305241 - 3305172
Alignment:
Q  124 gtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||| || | ||||||| ||||||||||||||||| |||  ||||||| |||||| |||||||||    
T  3305241 gtattggtttgggatctgggagcgtgctcctcctcaaggtctcaaattcgattatctctggtgccaattt 3305172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 36205233 - 36205273
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    ||||||||||||||||||||||||| ||| |||||||||||    
T  36205233 ctgggagtgtgctcctcctcaaggtctcatgttcgattctc 36205273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 1372563 - 1372509
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    ||||||||||||| | ||||| ||||||||||||| |||||||| |||||||||||    
T  1372563 gagtgtgctcctctt-aaggtctcaggttcgattccctctgatgtcaattttgatg 1372509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 35583638 - 35583697
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatga 199  Q
    ||||||| ||||||||||| |||| ||||| ||||| ||||||| || ||||||||||||    
T  35583638 tgggagtttgctcctcctcgaggtctcaggatcgatactctctggtgtcaattttgatga 35583697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 6569809 - 6569755
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||  |||||||| |||||||||||| || || ||||||    
T  6569809 ctgggagtgtgctcctcctttaggtttcatgttcgattctctttggtgtcaattt 6569755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 8059674 - 8059724
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||| ||||||||||||| |||||||| |||||| |||||| ||||||    
T  8059674 gagtgtgatcctcctcaaggtctcaggttccattctccctgatgtcaattt 8059724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 11928772 - 11928730
Alignment:
Q  136 aacctgggagtgtgctcctcctcaaggtttcaggttcgattct 178  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||    
T  11928772 aacctggaagtgtgctcctcctcgaggtctcaggttcgattct 11928730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 16843831 - 16843773
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    ||||||||||||||||| |||| | ||||||||||||||||| | || |||||| ||||    
T  16843831 tgggagtgtgctcctccgcaagatctcaggttcgattctctccggtgtcaatttagatg 16843773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 18897208 - 18897258
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||| ||| ||||||||||  ||| |||||||||    
T  18897208 gagtgtgctcctcctcaaggtctcatgttcgattcttcctggtgccaattt 18897258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 29858103 - 29858049
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattc 177  Q
    |||||||| | || ||| |||||||||||||||||| |||| |||||||||||||    
T  29858103 ggtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattc 29858049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 30774790 - 30774720
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||| || | |||| |||||| |||||||| |||| |||| ||||||| |||| |||||||||||    
T  30774790 ggtattggtttgggatctggaagtgtgttcctcctcgaggtctcagattcgattttctccgatgccaattt 30774720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 33727906 - 33727868
Alignment:
Q  144 agtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  33727906 agtgtgctcctcctcaaggtctcaggttcgattccctct 33727868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 40872918 - 40872968
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||| ||||||||| |||||| |||||||| | |||||||||    
T  40872918 gagtgtgctcctcttcaaggttttaggttccattctctccggtgccaattt 40872968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 44780151 - 44780109
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||    
T  44780151 tgggagtgtgctcctcctcaaggtctcaggtttgattccctct 44780109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 3058103 - 3058046
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctct 180  Q
    |||||||||| ||  | ||||||||||||||||  |||||| ||||||||||||||||    
T  3058103 ggtattggtttgggtcttgggagtgtgctcctctgcaaggtctcaggttcgattctct 3058046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 193
Target Start/End: Complemental strand, 3174834 - 3174789
Alignment:
Q  148 tgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||| |||||||||| ||||||||||||||||||| || ||||||    
T  3174834 tgctcatcctcaaggtctcaggttcgattctctctggtgtcaattt 3174789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 3721194 - 3721153
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    ||||||||||||||||||| | ||||||||||||||| ||||    
T  3721194 tgggagtgtgctcctcctcgatgtttcaggttcgattttctc 3721153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 6436590 - 6436533
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatga 199  Q
    ||||||||||||||| |||||| |||| |||||||| ||||||  ||||||| |||||    
T  6436590 ggagtgtgctcctccgcaaggtctcagattcgattccctctgaaaccaatttggatga 6436533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 16585521 - 16585472
Alignment:
Q  144 agtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||| ||  |||||||| ||||||| ||||||||||||||||    
T  16585521 agtgtgctcctcttcgtggtttcagcttcgattatctctgatgccaattt 16585472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 30483921 - 30483868
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||  || |||||||| |||||||||  |||||||||    
T  30483921 tgggagtgtgctcctcctcagagtctcaggttcaattctctcttgtgccaattt 30483868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 35641938 - 35641897
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    ||||||||||||||||||| | || |||||||||||||||||    
T  35641938 tgggagtgtgctcctcctcgatgtctcaggttcgattctctc 35641897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 21566817 - 21566781
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattct 178  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  21566817 ggagtgtgctcctactcaaggtctcaggttcgattct 21566781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 24675546 - 24675490
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatga 199  Q
    |||||||||||| |||||||| |||| ||||||| |||||||||  ||||| |||||    
T  24675546 gagtgtgctccttctcaaggtctcagattcgattttctctgatgttaatttggatga 24675490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 43594349 - 43594313
Alignment:
Q  146 tgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  43594349 tgtgttcctcctcaaggtctcaggttcgattctctct 43594313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 26459464 - 26459394
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  26459464 ggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 26459394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 27313782 - 27313718
Alignment:
Q  129 ggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| ||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  27313782 ggtttggaacttgggagtttgctcctcctcaaggtttcagattcgattctctctgatgccaattt 27313718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 43215206 - 43215276
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  43215206 ggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctcttatgccaattt 43215276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 2962481 - 2962541
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctg 183  Q
    |||||||||| |||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  2962481 ggtattggtttggaacctgtgagtgtgctcctcctcaagatctcaggttcgattctctctg 2962541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 22760899 - 22760955
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  22760899 acctgggagtgtgctcctcctcaaggtctcaggttcgattctccccgatgccaattt 22760955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 23552154 - 23552210
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||    
T  23552154 acctgggagtgtgctcctcctcaaggtctcaagttcgattctctctaatgccaattt 23552210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 7721391 - 7721466
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    |||||||||| || |||||||||||| |||||||||||||| ||| ||||||||||||||| || |||||| ||||    
T  7721391 ggtattggtttgggacctgggagtgtactcctcctcaaggtctcatgttcgattctctctggtgtcaatttggatg 7721466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 17113829 - 17113887
Alignment:
Q  135 gaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| |||||    
T  17113829 gaacctgggagtgtgcttctcctcaaggtctcaagttcgattctctctgatgctaattt 17113887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 25655262 - 25655212
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  25655262 gagtgtgatcctcctcaaggtttcaggttcgattctctctggtgccaattt 25655212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 13106817 - 13106766
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  13106817 ggagtgtactcctcctcaaggtctcaggttcgattctctctgatgctaattt 13106766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 21558173 - 21558220
Alignment:
Q  146 tgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  21558173 tgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 21558220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 39631866 - 39631936
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || ||||||||||  ||||||||||||||| ||||||||||||||||||  |||||||||    
T  39631866 ggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctcttgtgccaattt 39631936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 5830655 - 5830598
Alignment:
Q  125 tattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||| ||||||||||||||| |||||||||||| ||||| |||||||| |||||    
T  5830655 tattggtttggaacctgggagtgtactcctcctcaagatttcaagttcgattatctct 5830598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 31835233 - 31835286
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttg 195  Q
    |||||||||||||||||||||| |||||||||||| || ||| |||||||||||    
T  31835233 ggagtgtgctcctcctcaaggtctcaggttcgattatccctggtgccaattttg 31835286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 2882986 - 2883042
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| |||||||||||||||||||||| |||||||| |||||||||| || ||||||    
T  2882986 accttggagtgtgctcctcctcaaggtctcaggttcaattctctctggtggcaattt 2883042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 30579371 - 30579427
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||| | |||||||||||| |||||||||||| |||||| |||||||||    
T  30579371 acctgggagtgtccacctcctcaaggtctcaggttcgattttctctggtgccaattt 30579427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 38851278 - 38851338
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctg 183  Q
    |||||||||| |||| ||| ||||||||| ||||||||||||||| ||| |||||||||||    
T  38851278 ggtattggtttggaatctgtgagtgtgcttctcctcaaggtttcatgtttgattctctctg 38851338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 14058286 - 14058333
Alignment:
Q  134 ggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||| |||||||||| |||||||||| |||||||||||||||||    
T  14058286 ggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 14368314 - 14368361
Alignment:
Q  134 ggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||| |||||||||| |||||||||| |||||||||||||||||    
T  14368314 ggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14368361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 15137594 - 15137645
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| ||||||| ||||||||||| || ||||||    
T  15137594 ggagtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaattt 15137645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 20335885 - 20335810
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    |||||||| | || || ||||||||||||||||||| |||| ||||||||||||||| | |||| |||||| ||||    
T  20335885 ggtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctcaccgatgtcaatttggatg 20335810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 27376796 - 27376741
Alignment:
Q  138 cctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||| | |||||||    
T  27376796 cctgggagtatgctcctcctcaaggtttctggttcaattctctctggtaccaattt 27376741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 29385778 - 29385727
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| ||||||| |||||||| || |||||||||    
T  29385778 ggagtgtgctcctcctcaaggtctcaggtttgattctctttggtgccaattt 29385727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 9183229 - 9183175
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| || |||||||||||| |||||| || ||||||    
T  9183229 ctgggagtgtgctcctcctcaaagtctcaggttcgattatctctggtgtcaattt 9183175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 11700207 - 11700256
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||||||    
T  11700207 gagtttgctcctcctcaaggtctcaggttcgattctctctg-tgccaattt 11700256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 17041050 - 17041008
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||| |||||||||||||||||||| |||||||||||||||||    
T  17041050 ctggaagtgtgctcctcctcaaggtctcaggttcgattctctc 17041008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 18363735 - 18363777
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  18363735 tgggagtgtgctcctcctcaaggtctcaggtttgattctctct 18363777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 24438301 - 24438231
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||| || || ||||||||||||| | || |||||||||| |||||||||||||| || ||||||    
T  24438301 ggtattggtttgggacttgggagtgtgctctttcttaaggtttcagattcgattctctctggtgtcaattt 24438231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 29785339 - 29785285
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| |||||||||||||||||||| ||| |||||||||| |||| |||||||||    
T  29785339 ctggaagtgtgctcctcctcaaggtctcatgttcgattctttctggtgccaattt 29785285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 33222392 - 33222462
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||||| ||||| ||| |||||||||| ||||||||||||||||||| || ||||||    
T  33222392 ggtattggcttgggacctggaagtgtactcatcctcaaggtctcaggttcgattctctctggtgtcaattt 33222462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 30442510 - 30442567
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctct 180  Q
    |||||||| | || |||||||||| |||||||||||||||| | ||||||||||||||    
T  30442510 ggtattggcttgggacctgggagtttgctcctcctcaaggtctgaggttcgattctct 30442567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 37162387 - 37162334
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||| || |||||||| ||| ||||||||||||||| |||||||||    
T  37162387 tgggagtgtgcttcttctcaaggtctcaagttcgattctctctggtgccaattt 37162334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 41519299 - 41519258
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctg 183  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  41519299 ggagtgtgctcctcctcaaggtctcaggttcgcttctctctg 41519258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 43590929 - 43590998
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaatt 192  Q
    |||||||| | || || ||||||||||||||||||||| || ||||||||||||||| ||  ||||||||    
T  43590929 ggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaatt 43590998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 179
Target Start/End: Complemental strand, 29916842 - 29916806
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    ||||||||||||||||||||| |||||||||||||||    
T  29916842 gagtgtgctcctcctcaaggtctcaggttcgattctc 29916806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 33869485 - 33869429
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||| ||||||||||| |||||||| || |||||||||||||||| || ||||||    
T  33869485 acctggaagtgtgctccttctcaaggtctctggttcgattctctctggtgtcaattt 33869429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 45976963 - 45976907
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||| ||||||| | ||||  || ||||||||||||||||    
T  45976963 acctgggagtgtgctcctccttaaggttttaagttcatttatctctgatgccaattt 45976907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 9608667 - 9608624
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||| |||||||||||| | ||||||||||||||||||    
T  9608667 ctgggagtgtcctcctcctcaagatctcaggttcgattctctct 9608624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 9836239 - 9836196
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||| |||||||||||| | ||||||||||||||||||    
T  9836239 ctgggagtgtcctcctcctcaagatctcaggttcgattctctct 9836196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 37085586 - 37085547
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  37085586 tgggagtgtgctcatcctcgaggtttcaggttcgattctc 37085547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 42711997 - 42712036
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  42711997 tgggagtgtgctcctcctcaaggtctcatgttcgattctc 42712036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 5934159 - 5934213
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||  |||||||| ||||||||| ||||| || ||||||    
T  5934159 ctgggagtgtgctcctccttgaggtttcatgttcgattccctctggtgtcaattt 5934213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 7744150 - 7744096
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||| | |||||||||||||||| ||||||| ||||||||||| ||| |||||    
T  7744150 ctgggactatgctcctcctcaaggtctcaggtttgattctctctggtgcaaattt 7744096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 15905727 - 15905658
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||||||||||||||||||||  |||| ||||||||||||||| || ||| ||||||    
T  15905727 ggtattggcttgggacctgggagtgtgctcctcct-taggtctcaggttcgattctccctaatgtcaattt 15905658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 19553489 - 19553531
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    ||||||||||||||||||||||||||| | |||||| ||||||    
T  19553489 acctgggagtgtgctcctcctcaaggtcttaggttcaattctc 19553531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 20952203 - 20952145
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||||| || ||||||||||||||||||||||||  | |||| ||||||| ||||    
T  20952203 ggtattggtttgggacctgggagtgtgctcctcctcaaaatctcagattcgattatctc 20952145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 35119421 - 35119475
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||| || ||||| |||||||| |||||||||||||||||| | ||||||||||    
T  35119421 ctgggtgtatgctcatcctcaagatttcaggttcgattctctttaatgccaattt 35119475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 38374633 - 38374583
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||| | ||||||||||||| | | |||||||||    
T  38374633 gagtgtgctcctcctcaaggtcttaggttcgattctccccggtgccaattt 38374583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 45709742 - 45709692
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||| |||| |||||||||||| |||| ||| |||||||    
T  45709742 gagtgtgctcctcctcgaggtctcaggttcgattatctccgataccaattt 45709692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 4566468 - 4566407
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    |||| |||||||  |||| |||||||| ||||||| ||||||||||| ||||||||| ||||    
T  4566468 accttggagtgtattccttctcaaggtctcaggtttgattctctctggtgccaatttagatg 4566407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 7801216 - 7801253
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcga 174  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  7801216 acctgggagtgtgctcctcttcaaggtctcaggttcga 7801253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 18056810 - 18056773
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  18056810 ggagtgtgctcctcctgaaggtctcaggttcgattctc 18056773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 30217917 - 30217958
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctct 180  Q
    |||| |||||||||||||||||||| ||| ||||||||||||    
T  30217917 ctggaagtgtgctcctcctcaaggtctcaagttcgattctct 30217958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 35828282 - 35828323
Alignment:
Q  157 tcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    ||||||||||||||| |||||||||| |||||||||| ||||    
T  35828282 tcaaggtttcaggtttgattctctcttatgccaatttggatg 35828323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 37117191 - 37117138
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||| ||||||||  ||||||| |||||||||||||| | |||||||||    
T  37117191 tgggagtgtactcctccttgaggtttcgggttcgattctctccggtgccaattt 37117138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 5579274 - 5579218
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| |||||||||||||||||||||| ||||||| || |||| | | |||||||||    
T  5579274 accttggagtgtgctcctcctcaaggtctcaggtttgactctccccggtgccaattt 5579218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 7309396 - 7309436
Alignment:
Q  141 gggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||||||||||||| |||| ||| |||||||||||||    
T  7309396 gggagtgtgctcctcctcgaggtctcaagttcgattctctc 7309436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 11721014 - 11720958
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||| | || |||||||| |||||||||||| ||||| |||| ||||||||||    
T  11721014 ggtattggcttgggacctgggaatgtgctcctccttaaggtatcagattcgattctc 11720958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 30301925 - 30301957
Alignment:
Q  146 tgtgctcctcctcaaggtttcaggttcgattct 178  Q
    |||||||||||||||||| ||||||||||||||    
T  30301925 tgtgctcctcctcaaggtctcaggttcgattct 30301957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 41703369 - 41703333
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcg 173  Q
    |||| |||||||||||||||||||||||||| |||||    
T  41703369 accttggagtgtgctcctcctcaaggtttcatgttcg 41703333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 46518666 - 46518720
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  46518666 ctgggagtgtgctcctcctcaaggtttcaggtttgattctctctgatgccaattt 46518720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 27093415 - 27093345
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | ||||| |||||||||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  27093415 ggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaattt 27093345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 53412967 - 53413037
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | | |||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||    
T  53412967 ggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaattt 53413037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 27259197 - 27259253
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||    
T  27259197 acctgggagtgtgctcctcctcgaggtttcaggtttgattctctctgatgtcaattt 27259253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 39253735 - 39253787
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaat 191  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  39253735 ctgggagtgtgctcctcttcaaggtctcaggttcgattctctctgatgccaat 39253787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 16354946 - 16354879
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaa 190  Q
    |||||||| | |||||||| ||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  16354946 ggtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgattctctctggtgccaa 16354879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 37788508 - 37788449
Alignment:
Q  134 ggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  37788508 ggaacctaggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaattt 37788449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 28703442 - 28703388
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  28703442 ctgggagtgtgctcctcttcaaggtctcaggttcgattctctctggtgccaattt 28703388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 30311344 - 30311398
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||||||| |||||||||||||||| || |||||||||    
T  30311344 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgccaattt 30311398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 10445179 - 10445123
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||| ||| |||||    
T  10445179 acctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgctaattt 10445123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 3427591 - 3427537
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||||||| |||| |||||||||||||  |||||||||    
T  3427591 ctgggagtgtgctcctcctcaaggtctcagattcgattctctctagtgccaattt 3427537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 8075164 - 8075122
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  8075164 tgggagtgtgctcctcctcaaggtttcaggttcgattccctct 8075122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 15048099 - 15048045
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||| |||||||||||||||||| |||||||||||| |||||| |||||||||    
T  15048099 ctgggaatgtgctcctcctcaaggtctcaggttcgattatctctggtgccaattt 15048045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 30715781 - 30715838
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    ||||||||||||||||||||| |||||||||||||||||||| | ||||||||| ||||    
T  30715781 tgggagtgtgctcctcctcaatgtttcaggttcgattctctccg-tgccaatttggatg 30715838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 36720420 - 36720462
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  36720420 tgggagtgtgctcctcctcgaggtttcaggttcgattctctct 36720462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 8796130 - 8796077
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||    
T  8796130 tgggagtatgctcctcctcaaggtctcaagttcgattctctctgatgctaattt 8796077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 14186688 - 14186727
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  14186688 ggagtgtgctcctcctcaaggtctcaggttcgattctctc 14186727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 19154668 - 19154723
Alignment:
Q  138 cctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| ||||||||||||||| ||||| |||||||||||||||| ||||| ||||||    
T  19154668 cctgagagtgtgctcctcctaaaggtctcaggttcgattctctttgatgtcaattt 19154723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 32651492 - 32651433
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||| | || ||||||||||||||||||||||||| | |||| |||||||||||||    
T  32651492 ggtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctct 32651433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 2709415 - 2709469
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| ||| ||||||||||| |||||| ||||| |||||||||||||||||||||    
T  2709415 ctggaagtatgctcctcctcgaggttttaggtttgattctctctgatgccaattt 2709469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 4222179 - 4222233
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| || | ||||||||||||||||| || ||||||    
T  4222179 ctgggagtgtgctcctcctcaaagtcttaggttcgattctctctggtgtcaattt 4222233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 4844549 - 4844495
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||| |||| ||||| ||||||||||| | |||||||||    
T  4844549 ctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaattt 4844495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 4870245 - 4870191
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||| |||| ||||| ||||||||||| | |||||||||    
T  4870245 ctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaattt 4870191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 17108935 - 17108889
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatg 186  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  17108935 tgggagtgtgctcctcctcaaggtctcaggtttgattctccctgatg 17108889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 36010776 - 36010830
Alignment:
Q  135 gaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgcca 189  Q
    |||| ||||||||||||||||||||| || ||| ||||||||||||||| |||||    
T  36010776 gaacatgggagtgtgctcctcctcaaagtctcaagttcgattctctctggtgcca 36010830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 47237025 - 47236955
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||| || ||| ||||||||||||||| ||||||| ||| ||||||||||| | | |||||||||    
T  47237025 ggtattggtttgggacccgggagtgtgctcctcttcaaggtctcatgttcgattctccccggtgccaattt 47236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 181
Target Start/End: Original strand, 51766933 - 51766975
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||||||||| ||||||||||||||| ||||||||||||    
T  51766933 ctgggagtgtgctcttcctcaaggtttcagattcgattctctc 51766975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 33899653 - 33899706
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||| |||| |||||||||||||||| || || ||||||    
T  33899653 tgggagtgtgctcctcctctaggtctcaggttcgattctctttggtgtcaattt 33899706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 8501611 - 8501571
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  8501611 ctgggagtgtgctcctcctcaaagtttcaggttcaattctc 8501571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 10828773 - 10828717
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||| ||||||| || ||||| |||||||||||| ||| ||||||||||||    
T  10828773 acctgggagtatgctcctacttaaggtctcaggttcgattatctatgatgccaattt 10828717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 14339649 - 14339701
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaatt 192  Q
    ||||||||||||||||||||| || ||||||||||||||| ||  ||||||||    
T  14339649 tgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaatt 14339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 20501732 - 20501776
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||    
T  20501732 acctgagagtgtgctcctccttaaggtctcaggttcgattctctc 20501776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 26481963 - 26482007
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||    
T  26481963 acctgagagtgtgctcctcctcaaagttttaggttcgattctctc 26482007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 34062587 - 34062532
Alignment:
Q  140 tgggagtgtgctc--ctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||  ||||||||||| |||||||| |||||||||| |||||||||    
T  34062587 tgggagtgtgctctcctcctcaaggtctcaggttcaattctctctggtgccaattt 34062532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 13808923 - 13808864
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    |||| ||||||||||||||| |||| |||||||| ||||||||| ||| |||||| ||||    
T  13808923 ctggcagtgtgctcctcctctaggtctcaggttcaattctctctaatgtcaatttggatg 13808864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 17765164 - 17765203
Alignment:
Q  138 cctgggagtgtgctcctcctcaaggtttcaggttcgattc 177  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  17765164 cctgggagtgtgctcctcctcaagatctcaggttcgattc 17765203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 19066484 - 19066523
Alignment:
Q  138 cctgggagtgtgctcctcctcaaggtttcaggttcgattc 177  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  19066484 cctgggagtgtgctcctcctcaagatctcaggttcgattc 19066523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 44069799 - 44069850
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| ||||||| |||||| || | |||||||||    
T  44069799 ggagtgtgctcctcctcaaggtctcaggtttgattctttccggtgccaattt 44069850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 47454652 - 47454601
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||| |||| ||||||||||||||| |  ||||||||||    
T  47454652 ggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaattt 47454601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 49494183 - 49494132
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaat 191  Q
    ||||||||||||| ||||| |||| ||||||| ||||||| |||||||||||    
T  49494183 tgggagtgtgctcttcctcgaggtctcaggtttgattctccctgatgccaat 49494132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 8170694 - 8170764
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | | ||| ||||||||||||||| |||||||| ||||||||||||  ||||| || ||||||    
T  8170694 ggtattggcttgaaacttgggagtgtgctcctactcaaggtctcaggttcgatttcctctggtgtcaattt 8170764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 11612337 - 11612391
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||| ||||| ||||||||||| ||| | | |||||||||    
T  11612337 ctgggagtgtgctcctccttaaggtctcaggttcgatgctccccggtgccaattt 11612391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 21960573 - 21960631
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||| | || ||||| |||||||||||||||| |||| |||| ||||||||||||    
T  21960573 ggtattggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgattctctc 21960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 44743893 - 44743851
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||||||||||||||| |||| |||||||||||| ||||    
T  44743893 ctgggagtgtgctcctcctcgaggtctcaggttcgattatctc 44743851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 51903916 - 51903874
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    ||||||||||||||||||||  ||| |||||||||||||||||    
T  51903916 ctgggagtgtgctcctcctcgtggtctcaggttcgattctctc 51903874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 54990738 - 54990780
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||| |||| ||||||||||||||||| |||||||||||||||    
T  54990738 accttggagcgtgctcctcctcaaggtctcaggttcgattctc 54990780  T

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Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 198
Target Start/End: Original strand, 55287854 - 55287892
Alignment:
Q  160 aggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  55287854 aggtttcaggttcgattccctctggtgccaattttgatg 55287892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 7973599 - 7973648
Alignment:
Q  144 agtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||| |||| || ||||||| |||||||||||||||||||| ||||||    
T  7973599 agtgtgttccttcttaaggttttaggttcgattctctctgatgtcaattt 7973648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 19716238 - 19716275
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||||||||||||||||| || ||||||||||||    
T  19716238 ggagtgtgctcctcctcaaggtctctggttcgattctc 19716275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 47810781 - 47810728
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||| |||||| || |||| ||||||||| | |||||||||    
T  47810781 tgggagtgtgctcctccgcaaggtctcgggtttgattctctccggtgccaattt 47810728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 52770021 - 52769980
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctct 180  Q
    |||||||||||||||||||  |||| ||||||||||||||||    
T  52770021 ctgggagtgtgctcctccttgaggtctcaggttcgattctct 52769980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 18319222 - 18319182
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggt 163  Q
    |||||||||| || ||||||||||||||||||| |||||||    
T  18319222 ggtattggtttgggacctgggagtgtgctcctcttcaaggt 18319182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 31608562 - 31608518
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctg 183  Q
    |||||||||||||||||||| |||| |||| || |||||||||||    
T  31608562 ctgggagtgtgctcctcctcgaggtctcagatttgattctctctg 31608518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 31789008 - 31788964
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctg 183  Q
    |||||||||||||||||||| |||||| ||||| |||| ||||||    
T  31789008 ctgggagtgtgctcctcctcgaggttttaggtttgattatctctg 31788964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 34928981 - 34928925
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||| |||| |||||||||| ||||| |||| ||||||||||||| |||| |||||    
T  34928981 acctgagagtatgctcctccttaaggtctcagattcgattctctctaatgctaattt 34928925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 49452912 - 49452944
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttc 172  Q
    |||||||||||||||||||||||| ||||||||    
T  49452912 tgggagtgtgctcctcctcaaggtctcaggttc 49452944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 1e-18; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 42922436 - 42922507
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctc-aaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | ||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||    
T  42922436 ggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctctggtgccaattt 42922507  T

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Target: chr2; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 29503293 - 29503349
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||||| || ||||||||||||||||||||||||||| |||||||||||||||    
T  29503293 ggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 29503349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 13803536 - 13803587
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  13803536 ggagtgtgctcctcctcaaggtctcaggttcgattatctctgatgccaattt 13803587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 40416433 - 40416374
Alignment:
Q  134 ggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||||||||| |||||||||    
T  40416433 ggaacctgggagtatgctcctccttaaggtctcaggttcgattctctctggtgccaattt 40416374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 42327449 - 42327379
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || ||||||||||||||||||||||||||| ||||||||||||||||  | |||||||||    
T  42327449 ggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaattt 42327379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 19244145 - 19244201
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||| |||||||||    
T  19244145 acctgagagtgtgctcctccccaaggtctcaggttcgattctctctggtgccaattt 19244201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 16918632 - 16918557
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    |||||||||| || | ||||||||||||||||||||||||| | ||||| ||||||||||| ||||| ||| ||||    
T  16918632 ggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctctctggtgccactttggatg 16918557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 4060268 - 4060198
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||| | |||||| ||||||||| ||||||||| | ||||||||||||||||||| || ||||||    
T  4060268 ggtattggtttgaaacctgagagtgtgcttctcctcaagatctcaggttcgattctctctggtgtcaattt 4060198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 14500315 - 14500369
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||| |||| |||| |||||||||||||| |||||||||    
T  14500315 ctgggagtgtgctcctcctctaggtctcagattcgattctctctggtgccaattt 14500369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 19322790 - 19322860
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||| || ||||||||||||||||||| ||||||| || |||| ||||||||||  |||||||||    
T  19322790 ggtattggtttgggacctgggagtgtgctcctcttcaaggtctctggtttgattctctctagtgccaattt 19322860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 21304031 - 21303978
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| || ||||||    
T  21304031 tgggagtatgctcctcctgaaggtttcaggttcgattctctctggtgtcaattt 21303978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 4262342 - 4262298
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||| |||||||||||||||||||| |||||||||||||||||    
T  4262342 acctggcagtgtgctcctcctcaaggtctcaggttcgattctctc 4262298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 21195719 - 21195671
Alignment:
Q  134 ggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  21195719 ggaacttgggagtgtgctcctcctcaaggtctcaggttcgattccctct 21195671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 37480097 - 37480153
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||| | || ||||| ||||||||||||||||||||| |||||||||||||||    
T  37480097 ggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 37480153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 45026784 - 45026835
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| ||| ||| ||||||||||| |||||||||    
T  45026784 ggagtgtgctcctcctcaaggtctcatgtttgattctctctggtgccaattt 45026835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 10449063 - 10449113
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaatt 192  Q
    |||||||||||||||||||||||||| ||||||||| ||| || |||||||    
T  10449063 ggagtgtgctcctcctcaaggtttcatgttcgattccctccgacgccaatt 10449113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 11251109 - 11251179
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || || ||| |||||||||||||||||||| ||||||| ||||||||||| || ||||||    
T  11251109 ggtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattctctctggtgtcaattt 11251179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 25637189 - 25637243
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||| ||| |||| ||||||||| ||||||| |||||||||||    
T  25637189 ctgggagtgtgctccttctcgaggtctcaggttcggttctctccgatgccaattt 25637243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 30410603 - 30410533
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||| |||||||||||||||||||||  ||| |||||||| |||||| |||||||||    
T  30410603 ggtattggcttgggacctaggagtgtgctcctcctcaaggactcatgttcgattttctctggtgccaattt 30410533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 34041622 - 34041572
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||| ||||||| ||||| ||||| |||||||||    
T  34041622 gagtgtgctcctcctcaaggtctcaggtttgattccctctggtgccaattt 34041572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 39715028 - 39715070
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  39715028 acctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39715070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 42602576 - 42602646
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||||||||||||||||| |||||||| | ||||| ||||||||| | |||||||||    
T  42602576 ggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaattt 42602646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 11062384 - 11062441
Alignment:
Q  125 tattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||| | ||||| |||||||||||| ||||||||||| ||||||| ||||||||||    
T  11062384 tattggcttggaacttgggagtgtgcttctcctcaaggtctcaggtttgattctctct 11062441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 33839297 - 33839244
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||||| |||||||| ||||| |||| ||| |||||    
T  33839297 tgggagtgtgctcctcctcaaggtctcaggttcaattctttctggtgctaattt 33839244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 4226111 - 4226147
Alignment:
Q  150 ctcctcctcaaggtttcaggttcgattctctctgatg 186  Q
    ||||||||||||||||||||||||||| |||||||||    
T  4226111 ctcctcctcaaggtttcaggttcgattatctctgatg 4226147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 17737678 - 17737606
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttg 195  Q
    |||||||||| |  || |||||||||||||||||||||||| ||| |||||||| || ||  |||||||||||    
T  17737678 ggtattggtttgtgacttgggagtgtgctcctcctcaaggtctcatgttcgattatccctagtgccaattttg 17737606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 23052577 - 23052521
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||| | || || |||||||||||| ||||||||||| |||||||||||||||    
T  23052577 ggtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctc 23052521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 33582009 - 33582065
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||| |||||||||||||||  |||| |||||||||||||||||| ||| ||||||    
T  33582009 acctgagagtgtgctcctccttgaggtctcaggttcgattctctctaatgtcaattt 33582065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 194
Target Start/End: Original strand, 1729838 - 1729909
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaatttt 194  Q
    |||||||| | || || ||||||||||||||||||| |||| | || || ||||||||||| ||||||||||    
T  1729838 ggtattggcttgggacttgggagtgtgctcctcctctaggtcttagatttgattctctctggtgccaatttt 1729909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 27244344 - 27244387
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctct 180  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||    
T  27244344 acctgggagtatgctcctcctcgaggtttaaggttcgattctct 27244387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 6859349 - 6859307
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||||||||| |||| || ||||||||||||||||||    
T  6859349 tgggagtgtgctcctcttcaaagtctcaggttcgattctctct 6859307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 12086183 - 12086129
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattc 177  Q
    |||||||| | || |||||| |||||||||||||||||||| || ||||||||||    
T  12086183 ggtattggcttgggacctggaagtgtgctcctcctcaaggtctcgggttcgattc 12086129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 21213791 - 21213861
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || ||||||||||||| |||||||  |||| ||||||||||||||| | | |||||||||    
T  21213791 ggtattggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctccccggtgccaattt 21213861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 23230643 - 23230601
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||    
T  23230643 ctgggagtgtgctcctcctcaaagttccaggttcaattctctc 23230601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 37756025 - 37755955
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||||||| ||||||||| ||| |||| ||| |||||| || |||||||||||||||    
T  37756025 ggtattggcttgggacctgggaatgtgctcctactcgaggtctcaagttcgactccctctgatgccaattt 37755955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 2750659 - 2750610
Alignment:
Q  144 agtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||| |||||||||| ||| ||||||||||||||  |||||||||    
T  2750659 agtgtgctcttcctcaaggtctcatgttcgattctctctagtgccaattt 2750610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 6658406 - 6658463
Alignment:
Q  125 tattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||| | ||||||| |||||||| |||||||| || ||| ||||||||||||||    
T  6658406 tattggtttgtaacctggaagtgtgcttctcctcaaagtctcatgttcgattctctct 6658463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 180
Target Start/End: Complemental strand, 7600015 - 7599978
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctct 180  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  7600015 gagtgtgctcctcctcgaggtttcatgttcgattctct 7599978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 8192514 - 8192466
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaat 191  Q
    |||||||||||||| ||||||| ||||||||||||| ||||| |||||||    
T  8192514 ggagtgtgctcctc-tcaaggtctcaggttcgattccctctggtgccaat 8192466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 11738078 - 11738037
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctga 184  Q
    ||||||| |||||||||| ||||||||||||||| |||||||    
T  11738078 gagtgtgttcctcctcaaagtttcaggttcgattatctctga 11738037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 33569891 - 33569842
Alignment:
Q  144 agtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||| ||||| |||| ||||||||||||||||||| ||| |||||    
T  33569891 agtgtgctcttcctcgaggtctcaggttcgattctctctggtgctaattt 33569842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 727675 - 727619
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    |||||||| || |||||||  ||||| ||||||||||||||| ||||||||| ||||    
T  727675 ggagtgtgttcgtcctcaaaatttcatgttcgattctctctggtgccaatttggatg 727619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 9318092 - 9318060
Alignment:
Q  160 aggtttcaggttcgattctctctgatgccaatt 192  Q
    |||| ||||||||||||||||||||||||||||    
T  9318092 aggtctcaggttcgattctctctgatgccaatt 9318060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 12497813 - 12497777
Alignment:
Q  146 tgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||||||||||| |||| |||||||||||||    
T  12497813 tgtgctcctcctcaaggtctcagattcgattctctct 12497777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 12994416 - 12994376
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattc 177  Q
    ||||||||||||||||||||| ||||| ||| |||||||||    
T  12994416 acctgggagtgtgctcctccttaaggtctcaagttcgattc 12994376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 28846727 - 28846783
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| | || |||||||||||| || | |||| ||||||    
T  28846727 acctgggagtgtgctcctcctcgatgtctcaggttcgattatcaccgatgtcaattt 28846783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 41908678 - 41908622
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| |||||||||||||||||||||| ||| |||||||| || | | |||||||||    
T  41908678 accttggagtgtgctcctcctcaaggtctcaagttcgattatccccggtgccaattt 41908622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 42860384 - 42860424
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattc 177  Q
    |||||||||||||||||||||| |||| ||| |||||||||    
T  42860384 acctgggagtgtgctcctcctcgaggtctcaagttcgattc 42860424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 15377 - 15307
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||    
T  15377 ggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaattt 15307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 95025 - 94955
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||    
T  95025 ggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcaattatctctggtgccaattt 94955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 5e-18; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 12188357 - 12188287
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || ||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||    
T  12188357 ggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaattt 12188287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 33549126 - 33549196
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | || |||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||    
T  33549126 ggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaattt 33549196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 17328304 - 17328255
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatg 186  Q
    ||||| |||| |||||||| ||||||||||||||||||||||||||||||    
T  17328304 acctgagagtatgctcctcttcaaggtttcaggttcgattctctctgatg 17328255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 11306213 - 11306158
Alignment:
Q  138 cctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||| ||||| || ||||||| ||||||||||||||||||| |||||||||    
T  11306213 cctgggagtatgctcatcttcaaggtctcaggttcgattctctctggtgccaattt 11306158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 20863416 - 20863467
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||| |||| || |||||||||| ||||||||||    
T  20863416 ggagtgtgctcctcctcaaggtctcagatttgattctctctaatgccaattt 20863467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 23910151 - 23910108
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctct 180  Q
    ||||||||||||||||||||||||||| |||||||||| |||||    
T  23910151 acctgggagtgtgctcctcctcaaggtctcaggttcgaatctct 23910108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 27989700 - 27989641
Alignment:
Q  134 ggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||| ||||||| ||||||| || |||||||||||||||||| |||||| |||||||||    
T  27989700 ggaacttgggagtatgctccttcttaaggtttcaggttcgattatctctggtgccaattt 27989641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 28363959 - 28364034
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgatg 198  Q
    |||||||||| || | ||| ||||||||||||||||||||| |||| ||||||| |||||| || |||||| ||||    
T  28363959 ggtattggtttgggatctgcgagtgtgctcctcctcaaggtctcagattcgattatctctggtgtcaatttggatg 28364034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 10338228 - 10338174
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattc 177  Q
    |||||||| | || |||| |||||||||||||||||||||| |||||||||||||    
T  10338228 ggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcgattc 10338174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 3779378 - 3779435
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttgat 197  Q
    ||||||||||||||| |||||||| |||| ||| |||| |||||||| ||||||||||    
T  3779378 tgggagtgtgctccttctcaaggtctcagattcaattccctctgatgtcaattttgat 3779435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 15951339 - 15951286
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||||||||||||| ||| |||| |||||||||| | |||||||    
T  15951339 tgggagtgtgctcctcctcaaggtctcatgttcaattctctctggtaccaattt 15951286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 20213077 - 20213122
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||||||||||||||||| || ||||||||||||| ||||    
T  20213077 acctgggagtgtgctcctcctcaatgtctcaggttcgattccctct 20213122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 22107100 - 22107145
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctct 182  Q
    |||||||||||||||||||||||| || ||||||||||||| ||||    
T  22107100 acctgggagtgtgctcctcctcaatgtctcaggttcgattccctct 22107145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 6385898 - 6385942
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||| |||||||||||| ||||| |||||||||||||||||    
T  6385898 acctgggactgtgctcctccttaaggtctcaggttcgattctctc 6385942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 6691590 - 6691535
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||| | |||||||||    
T  6691590 accttggagtgtgctcctc-tcaaggtctcaggttcgattctctccggtgccaattt 6691535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 14278151 - 14278095
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||| ||||||||| ||||| ||||||| ||||||||||| || ||||||    
T  14278151 acctgggagtgcgctcctccttaaggtctcaggtttgattctctctggtgtcaattt 14278095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 24641228 - 24641188
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  24641228 ctgggagtgtgctcctcctcgaggtttaaggttcgattctc 24641188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 28841455 - 28841494
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  28841455 ggagtgtgctcctcctcaaggtctcaagttcgattctctc 28841494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 1056722 - 1056672
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaa 190  Q
    ||||||| ||||| |||||||||||| | ||||||||||||||| ||||||    
T  1056722 tgggagtatgctcatcctcaaggttttaagttcgattctctctggtgccaa 1056672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 3907578 - 3907627
Alignment:
Q  145 gtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattttg 195  Q
    ||||||||||| ||||| ||||| ||||||||||||||| |||||||||||    
T  3907578 gtgtgctcctc-tcaagatttcaagttcgattctctctggtgccaattttg 3907627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 13330121 - 13330179
Alignment:
Q  135 gaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| |||||||  ||||||||||||||| |||| |||||||||||||  |||||||||    
T  13330121 gaacttgggagtaagctcctcctcaaggtctcagattcgattctctcttgtgccaattt 13330179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 16405109 - 16405163
Alignment:
Q  125 tattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||| || ||||||||||||||| |||||| |||| |||| ||||||||||    
T  16405109 tattggtttgggacctgggagtgtgcttctcctcgaggtctcagtttcgattctc 16405163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 16535226 - 16535276
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||| || ||||||||||||||||||| |  |||||||||    
T  16535226 gagtgtgctcctcctaaaagtttcaggttcgattctctgtagtgccaattt 16535276  T

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Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 19638047 - 19638001
Alignment:
Q  134 ggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctct 180  Q
    ||||||||||||||||||||  |||||||| ||||||| ||||||||    
T  19638047 ggaacctgggagtgtgctccagctcaaggtctcaggtttgattctct 19638001  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 26857293 - 26857259
Alignment:
Q  154 tcctcaaggtttcaggttcgattctctctgatgcc 188  Q
    |||| ||||||||||||||||||||||||||||||    
T  26857293 tccttaaggtttcaggttcgattctctctgatgcc 26857259  T

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Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 30127438 - 30127492
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||| || |||| |||||||||||||| || | |||||||||    
T  30127438 ctgggagtgtgctcctcttcgaggtctcaggttcgattctttccggtgccaattt 30127492  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 4105086 - 4105143
Alignment:
Q  136 aacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||| |||||||||||||||| ||| | |||||||||||| |||||| || ||||||    
T  4105086 aacctaggagtgtgctcctccttaagatctcaggttcgattttctctggtgtcaattt 4105143  T

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Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 11103468 - 11103419
Alignment:
Q  144 agtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||| ||||| || | |||||||||||||| |||||||||    
T  11103468 agtgtgctcctccttaaggtctccgattcgattctctctggtgccaattt 11103419  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 12216766 - 12216823
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctct 180  Q
    |||||||||| || ||||| || ||||||||| ||| |||| ||||||||||||||||    
T  12216766 ggtattggtttgggacctgcgaatgtgctccttctcgaggtctcaggttcgattctct 12216823  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 14199984 - 14199947
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattc 177  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  14199984 tgggagtgtgctcctcctcaaggtctcagattcgattc 14199947  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 12234547 - 12234503
Alignment:
Q  137 acctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||||||||||||  ||| |||| |||||||||||||||||    
T  12234547 acctgggagtgtgctccctctcgaggtctcaggttcgattctctc 12234503  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 19162823 - 19162863
Alignment:
Q  141 gggagtgtgctcctcctcaaggtttcaggttcgattctctc 181  Q
    |||||||||||||||||| || | |||||||||||||||||    
T  19162823 gggagtgtgctcctcctcgagatctcaggttcgattctctc 19162863  T

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Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 31623045 - 31622997
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggtt 171  Q
    |||||||| | || |||||||||||||||||||||| |||| |||||||    
T  31623045 ggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtt 31622997  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 179
Target Start/End: Original strand, 34444845 - 34444881
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    |||||||||||||| |||||| |||||||||||||||    
T  34444845 gagtgtgctcctccccaaggtctcaggttcgattctc 34444881  T

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Target: scaffold0180 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 20016 - 19956
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctg 183  Q
    |||||||| | ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  20016 ggtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctctg 19956  T

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Target: scaffold0004 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 81616 - 81548
Alignment:
Q  125 tattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| |||| |||| |||||||||||||||||||| |||| |||||||||| |||||||||||||    
T  81616 tattggtttggaatctggaagtgtgctcctcctcaaggtctcagattcgattctccctgatgccaattt 81548  T

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Target: scaffold0006 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 18332 - 18391
Alignment:
Q  134 ggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  18332 ggaatctgggattgtgctcctcctcaaggtttcaggtttgattctctctggtgccaattt 18391  T

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Target: scaffold0194 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 13084 - 13030
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||    
T  13084 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctccgatgtcaattt 13030  T

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Target: scaffold0238 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 2746 - 2695
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||| |||||||||||||||| ||||||||||||||||||| |||||||||    
T  2746 ggagtctgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 2695  T

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Target: scaffold0238; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 5232 - 5275
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctg 183  Q
    |||||||||||||||||| || |||| |||||||||||||||||    
T  5232 tgggagtgtgctcctccttaaagttttaggttcgattctctctg 5275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 11566 - 11610
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctctctg 183  Q
    |||||||||||||||||||| |||| |||||||||||||||||||    
T  11566 ctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 11610  T

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Target: scaffold0291 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 2508 - 2468
Alignment:
Q  139 ctgggagtgtgctcctcctcaaggtttcaggttcgattctc 179  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  2508 ctgggagtgtgctcctcctcaaggtctcaggttcgattctc 2468  T

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Target: scaffold0063 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 35443 - 35373
Alignment:
Q  123 ggtattggttaggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||| | |||| || ||||| |||||||||||||||| | | |||||||| ||||||||||||||||    
T  35443 ggtattggcttggaatctaggagtatgctcctcctcaaggtcttaagttcgattatctctgatgccaattt 35373  T

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Target: scaffold0126 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 25384 - 25331
Alignment:
Q  140 tgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||||||||||| |||||||| |||||||||||| |||||| || ||||||    
T  25384 tgggagtgtgctccttctcaaggtctcaggttcgattatctctggtgtcaattt 25331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 24094 - 24145
Alignment:
Q  142 ggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||||||||||||| || | || |||||||||||| ||||||||||||||||    
T  24094 ggagtgtgctcctcttcgaagtgtcaggttcgattatctctgatgccaattt 24145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 42563 - 42504
Alignment:
Q  134 ggaacctgggagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| |||||||| ||||||||||||  || |||||||||||||||| || |||||||||    
T  42563 ggaatctgggagtatgctcctcctcagagtctcaggttcgattctctttggtgccaattt 42504  T

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Target: scaffold0118 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 41667 - 41617
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    |||| ||||||||||| |||| |||||||| ||||||||||||| ||||||    
T  41667 gagtatgctcctcctcgaggtctcaggttcaattctctctgatgtcaattt 41617  T

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Target: scaffold0102 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 17104 - 17154
Alignment:
Q  143 gagtgtgctcctcctcaaggtttcaggttcgattctctctgatgccaattt 193  Q
    ||||||| ||||| ||||| ||||||||||||||||||| |||| ||||||    
T  17104 gagtgtgttcctcttcaagatttcaggttcgattctctccgatgtcaattt 17154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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