View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1763_low_6 (Length: 789)

Name: NF1763_low_6
Description: NF1763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1763_low_6
NF1763_low_6
[»] chr5 (43 HSPs)
chr5 (253-597)||(1759786-1760136)
chr5 (1-175)||(1759534-1759708)
chr5 (284-397)||(35653252-35653364)
chr5 (281-386)||(43414072-43414176)
chr5 (284-397)||(25017288-25017400)
chr5 (284-392)||(5151489-5151596)
chr5 (286-393)||(16315535-16315639)
chr5 (284-397)||(39567903-39568015)
chr5 (281-393)||(4421965-4422076)
chr5 (284-396)||(8410142-8410253)
chr5 (284-390)||(12068178-12068283)
chr5 (288-389)||(34546782-34546882)
chr5 (304-391)||(27823279-27823365)
chr5 (285-390)||(3639079-3639182)
chr5 (284-397)||(28143120-28143232)
chr5 (288-397)||(35945250-35945358)
chr5 (293-397)||(1479133-1479236)
chr5 (284-372)||(13951258-13951345)
chr5 (284-397)||(338761-338873)
chr5 (284-397)||(4962514-4962625)
chr5 (281-382)||(25568304-25568404)
chr5 (329-397)||(15915876-15915944)
chr5 (289-397)||(37243852-37243958)
chr5 (285-390)||(10017626-10017727)
chr5 (285-371)||(12914176-12914261)
chr5 (479-592)||(1738973-1739080)
chr5 (529-595)||(1744360-1744426)
chr5 (288-373)||(6823773-6823858)
chr5 (285-392)||(27535098-27535202)
chr5 (281-365)||(39693007-39693090)
chr5 (549-597)||(1724448-1724496)
chr5 (281-371)||(10406785-10406873)
chr5 (281-327)||(4838278-4838324)
chr5 (285-366)||(16899599-16899680)
chr5 (299-377)||(3015067-3015144)
chr5 (285-330)||(39335474-39335519)
chr5 (288-371)||(28599677-28599759)
chr5 (300-379)||(39042050-39042128)
chr5 (316-397)||(40099363-40099443)
chr5 (347-397)||(104926-104976)
chr5 (299-392)||(17168691-17168783)
chr5 (299-372)||(39069298-39069370)
chr5 (340-377)||(39167650-39167687)
[»] chr1 (51 HSPs)
chr1 (607-770)||(13854614-13854777)
chr1 (284-397)||(34874567-34874679)
chr1 (284-397)||(932151-932263)
chr1 (284-397)||(22346231-22346343)
chr1 (284-397)||(41147472-41147584)
chr1 (284-389)||(42607326-42607430)
chr1 (285-397)||(27209715-27209826)
chr1 (292-391)||(11385810-11385908)
chr1 (284-397)||(49508728-49508839)
chr1 (281-389)||(6170553-6170660)
chr1 (285-397)||(43433776-43433887)
chr1 (284-396)||(49901926-49902037)
chr1 (288-396)||(50295428-50295535)
chr1 (284-390)||(47655372-47655477)
chr1 (284-397)||(11385981-11386093)
chr1 (284-397)||(29966822-29966935)
chr1 (284-389)||(33929966-33930070)
chr1 (281-397)||(2125701-2125816)
chr1 (284-396)||(24140773-24140883)
chr1 (284-391)||(4940740-4940846)
chr1 (291-397)||(32213883-32213988)
chr1 (286-390)||(40845253-40845356)
chr1 (284-392)||(52396443-52396549)
chr1 (284-397)||(7190469-7190581)
chr1 (288-397)||(28850904-28851011)
chr1 (285-389)||(26469584-26469687)
chr1 (281-389)||(28277484-28277591)
chr1 (281-377)||(50154470-50154565)
chr1 (281-397)||(44286869-44286984)
chr1 (305-397)||(45721773-45721864)
chr1 (281-364)||(47895331-47895413)
chr1 (288-390)||(4656020-4656121)
chr1 (311-397)||(5945447-5945532)
chr1 (299-397)||(14331852-14331949)
chr1 (299-397)||(16691309-16691406)
chr1 (299-393)||(17402963-17403056)
chr1 (281-389)||(31975484-31975591)
chr1 (299-377)||(48938651-48938727)
chr1 (347-397)||(8244150-8244200)
chr1 (299-393)||(43168156-43168249)
chr1 (288-361)||(30222624-30222697)
chr1 (683-770)||(29900202-29900289)
chr1 (299-397)||(44359666-44359763)
chr1 (288-390)||(40920189-40920292)
chr1 (287-392)||(41492912-41493015)
chr1 (299-372)||(41898878-41898950)
chr1 (309-377)||(8892785-8892852)
chr1 (309-383)||(27210750-27210823)
chr1 (357-391)||(30222991-30223025)
chr1 (688-770)||(31187353-31187435)
chr1 (688-745)||(31009554-31009611)
[»] chr4 (50 HSPs)
chr4 (284-397)||(35808393-35808505)
chr4 (284-397)||(55669739-55669851)
chr4 (285-397)||(2362630-2362743)
chr4 (288-397)||(26040357-26040465)
chr4 (671-771)||(34392224-34392323)
chr4 (281-390)||(32131139-32131247)
chr4 (285-390)||(34016626-34016730)
chr4 (284-397)||(41956210-41956322)
chr4 (281-397)||(10100110-10100225)
chr4 (284-396)||(23765578-23765689)
chr4 (284-390)||(51266924-51267029)
chr4 (284-397)||(27839303-27839415)
chr4 (284-397)||(34316719-34316832)
chr4 (284-397)||(45688743-45688855)
chr4 (284-396)||(31754938-31755049)
chr4 (281-389)||(33951697-33951804)
chr4 (285-389)||(30475426-30475529)
chr4 (284-397)||(26831783-26831894)
chr4 (284-384)||(20811263-20811362)
chr4 (285-397)||(31168135-31168246)
chr4 (284-372)||(19328950-19329037)
chr4 (284-390)||(50514618-50514722)
chr4 (284-364)||(47188695-47188774)
chr4 (292-396)||(54339121-54339223)
chr4 (329-391)||(19876186-19876248)
chr4 (285-378)||(52341602-52341694)
chr4 (285-397)||(35675187-35675298)
chr4 (285-393)||(29462802-29462909)
chr4 (284-396)||(40436081-40436192)
chr4 (329-397)||(51290474-51290542)
chr4 (284-396)||(53566948-53567062)
chr4 (330-396)||(46695960-46696026)
chr4 (286-391)||(13498120-13498224)
chr4 (329-396)||(9693380-9693446)
chr4 (306-397)||(31487743-31487833)
chr4 (688-763)||(52153045-52153120)
chr4 (309-390)||(35511184-35511264)
chr4 (287-378)||(3769816-3769906)
chr4 (285-366)||(45088071-45088148)
chr4 (284-330)||(9693534-9693580)
chr4 (289-393)||(30617954-30618057)
chr4 (309-377)||(52895749-52895816)
chr4 (285-368)||(15986267-15986349)
chr4 (347-397)||(16559991-16560041)
chr4 (284-386)||(20456569-20456670)
chr4 (288-374)||(35927294-35927379)
chr4 (299-377)||(36486703-36486780)
chr4 (299-377)||(55120106-55120183)
chr4 (364-393)||(19328748-19328777)
chr4 (289-390)||(48513624-48513724)
[»] chr2 (35 HSPs)
chr2 (284-395)||(6999202-6999312)
chr2 (285-397)||(765147-765258)
chr2 (288-390)||(2966544-2966645)
chr2 (284-393)||(862589-862697)
chr2 (284-397)||(39401532-39401643)
chr2 (281-397)||(16361563-16361678)
chr2 (284-397)||(17603811-17603923)
chr2 (284-397)||(33726380-33726492)
chr2 (284-397)||(39085789-39085901)
chr2 (284-389)||(41436478-41436582)
chr2 (285-397)||(27495124-27495235)
chr2 (281-390)||(17118377-17118484)
chr2 (284-397)||(1321168-1321280)
chr2 (284-393)||(35445291-35445400)
chr2 (281-390)||(9201499-9201606)
chr2 (288-393)||(17095068-17095171)
chr2 (281-390)||(33864352-33864460)
chr2 (285-377)||(44173120-44173211)
chr2 (292-396)||(44299679-44299782)
chr2 (275-385)||(13997913-13998022)
chr2 (288-393)||(17056059-17056162)
chr2 (288-393)||(17068506-17068609)
chr2 (281-385)||(464792-464896)
chr2 (288-393)||(17074489-17074592)
chr2 (281-358)||(23685688-23685764)
chr2 (281-330)||(11445382-11445431)
chr2 (284-388)||(34334167-34334270)
chr2 (288-390)||(2239586-2239687)
chr2 (297-389)||(43140328-43140419)
chr2 (284-345)||(15004927-15004987)
chr2 (329-372)||(11445313-11445356)
chr2 (299-390)||(34220650-34220740)
chr2 (285-390)||(2805382-2805488)
chr2 (299-397)||(11659277-11659374)
chr2 (344-397)||(12695233-12695286)
[»] chr7 (38 HSPs)
chr7 (284-397)||(43567503-43567615)
chr7 (284-397)||(29034687-29034799)
chr7 (284-397)||(5240329-5240441)
chr7 (288-397)||(40763253-40763361)
chr7 (281-390)||(42222218-42222326)
chr7 (285-397)||(8380442-8380553)
chr7 (281-390)||(43958087-43958195)
chr7 (284-396)||(8292745-8292856)
chr7 (285-393)||(27053494-27053601)
chr7 (284-389)||(7322958-7323062)
chr7 (284-393)||(22521586-22521694)
chr7 (284-389)||(24359713-24359817)
chr7 (284-396)||(22707049-22707159)
chr7 (281-396)||(49069552-49069666)
chr7 (281-397)||(30538477-30538589)
chr7 (285-395)||(41188785-41188894)
chr7 (288-396)||(40066915-40067021)
chr7 (289-388)||(3681699-3681797)
chr7 (284-393)||(1910244-1910351)
chr7 (308-397)||(48454819-48454907)
chr7 (284-379)||(40194826-40194920)
chr7 (304-397)||(36279139-36279231)
chr7 (281-390)||(46478560-46478667)
chr7 (285-397)||(8258640-8258746)
chr7 (284-393)||(5347973-5348078)
chr7 (285-376)||(46042749-46042838)
chr7 (287-384)||(31626051-31626147)
chr7 (288-374)||(42291284-42291371)
chr7 (284-356)||(29687476-29687547)
chr7 (285-390)||(1907593-1907697)
chr7 (293-361)||(30388693-30388760)
chr7 (690-770)||(39807975-39808055)
chr7 (329-377)||(31360309-31360357)
chr7 (287-357)||(6548533-6548602)
chr7 (285-314)||(29959068-29959097)
chr7 (288-373)||(32204186-32204270)
chr7 (329-374)||(37869384-37869429)
chr7 (285-377)||(42552489-42552579)
[»] chr3 (39 HSPs)
chr3 (284-392)||(36730155-36730262)
chr3 (281-396)||(4759848-4759962)
chr3 (284-393)||(8715503-8715610)
chr3 (284-393)||(9067390-9067497)
chr3 (285-397)||(29915572-29915683)
chr3 (285-397)||(29964725-29964836)
chr3 (281-390)||(46317483-46317591)
chr3 (281-397)||(32415566-32415681)
chr3 (281-396)||(44695669-44695783)
chr3 (281-396)||(37509108-37509222)
chr3 (284-385)||(12905292-12905391)
chr3 (284-397)||(44570383-44570495)
chr3 (284-397)||(10854859-10854975)
chr3 (285-375)||(52570783-52570872)
chr3 (284-389)||(35306332-35306436)
chr3 (284-393)||(51817313-51817421)
chr3 (284-397)||(8847449-8847561)
chr3 (284-389)||(12051038-12051142)
chr3 (288-397)||(25102319-25102426)
chr3 (329-397)||(1803932-1804000)
chr3 (285-397)||(45899540-45899652)
chr3 (281-369)||(20227405-20227492)
chr3 (292-393)||(18788-18888)
chr3 (284-345)||(31647304-31647364)
chr3 (286-374)||(34060786-34060873)
chr3 (357-397)||(41346346-41346386)
chr3 (341-397)||(48136720-48136776)
chr3 (286-360)||(41345977-41346050)
chr3 (291-379)||(11675320-11675405)
chr3 (529-592)||(2022788-2022851)
chr3 (312-383)||(39436493-39436563)
chr3 (529-595)||(3156968-3157034)
chr3 (292-376)||(18946-19029)
chr3 (543-595)||(3167250-3167302)
chr3 (302-378)||(49976157-49976232)
chr3 (288-367)||(11316970-11317048)
chr3 (299-396)||(12060057-12060153)
chr3 (342-407)||(44019107-44019172)
chr3 (299-396)||(48313836-48313932)
[»] chr8 (30 HSPs)
chr8 (284-397)||(19389307-19389419)
chr8 (284-396)||(21016234-21016345)
chr8 (284-390)||(25249345-25249450)
chr8 (285-385)||(18068963-18069062)
chr8 (285-393)||(45338005-45338112)
chr8 (281-395)||(6939155-6939268)
chr8 (288-390)||(8018765-8018866)
chr8 (284-391)||(4989936-4990039)
chr8 (284-388)||(21016063-21016166)
chr8 (284-384)||(26195383-26195482)
chr8 (293-389)||(26672799-26672894)
chr8 (288-389)||(10694811-10694911)
chr8 (284-393)||(3174456-3174568)
chr8 (284-389)||(34713924-34714030)
chr8 (284-384)||(14855394-14855493)
chr8 (285-389)||(37433267-37433369)
chr8 (304-391)||(5129459-5129545)
chr8 (329-393)||(7532829-7532893)
chr8 (302-377)||(31596438-31596512)
chr8 (297-383)||(26892799-26892884)
chr8 (329-391)||(44874369-44874431)
chr8 (316-397)||(35930168-35930248)
chr8 (288-376)||(6433548-6433635)
chr8 (281-345)||(33741523-33741586)
chr8 (302-390)||(25636694-25636780)
chr8 (299-373)||(25690855-25690929)
chr8 (299-392)||(11332796-11332888)
chr8 (340-396)||(19976488-19976545)
chr8 (299-377)||(34421335-34421412)
chr8 (285-330)||(30351592-30351637)
[»] chr6 (20 HSPs)
chr6 (284-396)||(6866915-6867026)
chr6 (284-396)||(12191493-12191604)
chr6 (295-397)||(10855443-10855544)
chr6 (284-397)||(5578274-5578386)
chr6 (284-374)||(7875201-7875290)
chr6 (307-397)||(29692338-29692427)
chr6 (281-397)||(8324101-8324216)
chr6 (284-397)||(26572079-26572186)
chr6 (284-392)||(16437592-16437691)
chr6 (281-396)||(7274212-7274326)
chr6 (287-393)||(28014638-28014743)
chr6 (284-374)||(7880447-7880536)
chr6 (284-328)||(32786069-32786113)
chr6 (299-377)||(27127524-27127601)
chr6 (285-378)||(12175561-12175652)
chr6 (329-397)||(32786260-32786327)
chr6 (285-396)||(31220325-31220435)
chr6 (335-375)||(12769254-12769294)
chr6 (302-377)||(20775010-20775084)
chr6 (308-389)||(22414598-22414676)
[»] scaffold0062 (3 HSPs)
scaffold0062 (284-393)||(16773-16880)
scaffold0062 (284-393)||(26941-27048)
scaffold0062 (284-393)||(37107-37214)
[»] scaffold0002 (1 HSPs)
scaffold0002 (284-364)||(392162-392241)
[»] scaffold0809 (2 HSPs)
scaffold0809 (329-396)||(4268-4335)
scaffold0809 (284-330)||(4709-4755)
[»] scaffold0144 (1 HSPs)
scaffold0144 (311-377)||(39614-39679)


Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 253 - 597
Target Start/End: Original strand, 1759786 - 1760136
Alignment:
Q  253 agtcacactattttgttaagggtcttgctaacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccatttt 352  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||| |||||||||||||||||||||||| |||| ||||||| ||||| |||||||    
T  1759786 agtcacactattttgttaagtgtcttgctaacacatttgcattggttttaacaacattttgacttttaaaaagttaaa-tttatcacttttctccatttt 1759884  T
Q  353 ccaatactatatttctatttttatccccttatccaatgccccaagcattcaccttttgttaaatataaagaagaaaacagaagcaacagagagcggaaga 452  Q
     ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1759885 tcaatactatatttctatttttatcctcttatccaatgccccaagcattctccttttgttaaatataaagaagaaaacaaaagcaacagagagcggaaga 1759984  T
Q  453 ggaagagagtaagaaagttggttcat-------ttttccaaataacaacaaagaagggaaagatgaaaattagaacaagaacaaagagaaaaatttggat 545  Q
    ||||||||||||||||||||||||||       ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1759985 ggaagagagtaagaaagttggttcatcatctggttttccaaataacaacaaagaagagaaagatgaaaattagaacaagaacaaagagaaaaatttggat 1760084  T
Q  546 tcaaggtctttttcatgtttattttgcaagagaaaatttgctacttcacagg 597  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1760085 tcaaggtctttttcatgtttattttgcaagagaaaatttactacttcacagg 1760136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 1759534 - 1759708
Alignment:
Q  1 atatttctataattcttctctgattatctagcattgcagaatgaccaaaattttcatctttaataagagcccttctaggactgcagggtcattttcagac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1759534 atatttctataattcttctctgattatctagcattgcagaatgaccaaaattttcatctttaataagagcccttctaggactgcagggtcattttcagac 1759633  T
Q  101 ttaatcccatacttcaaacttcnnnnnnnattacaccaaccgataatataagttgaattttaaaacacacaattg 175  Q
    |||| |||||||||||||||||       ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  1759634 ttaagcccatacttcaaacttctttttttattacaccaactgataatataagttaaattttaaaacacacaattg 1759708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 35653364 - 35653252
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||||||||||| ||| |||||| |||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  35653364 catgtttgcattggtttcaacaacattttgattttcaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttctatttttatcccctta 35653266  T
Q  384 tccaatgccccaag 397  Q
    |||||||| |||||    
T  35653265 tccaatgcaccaag 35653252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 281 - 386
Target Start/End: Complemental strand, 43414176 - 43414072
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||    
T  43414176 taacatgtttgcattggtttcaacaacattttgatttttaaaaagttaaa-ttgatcatttttcaccattttccaatgctatatttctatttttatcccc 43414078  T
Q  381 ttatcc 386  Q
    ||||||    
T  43414077 ttatcc 43414072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 25017400 - 25017288
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||| |||||||||||| | |||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  25017400 catgtttgtattggtttcaacgatattttgacttttaaaaagttaaa-tttatcacttttcacaattttccaatactatatttctatttttatcccctta 25017302  T
Q  384 tccaatgccccaag 397  Q
    ||||||||| ||||    
T  25017301 tccaatgcctcaag 25017288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 284 - 392
Target Start/End: Original strand, 5151489 - 5151596
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  5151489 catgtttgcattagtttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcatcattttccaatgttatatttctatttttatcccctta 5151587  T
Q  384 tccaatgcc 392  Q
    || ||||||    
T  5151588 tcaaatgcc 5151596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 286 - 393
Target Start/End: Complemental strand, 16315639 - 16315535
Alignment:
Q  286 tgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatc 385  Q
    ||||||||||||||||||||||||||||||| |||||||| ||   ||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  16315639 tgtttgcattggtttcaacaacattttgactattaaaaagtta---tttatcacttttcaccattttccaatgctatatttctatttttatccccttatc 16315543  T
Q  386 caatgccc 393  Q
    | ||||||    
T  16315542 cgatgccc 16315535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 39567903 - 39568015
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||||||  |||||| |||||||||| |||| |||||||||||||| ||||||||||| |||||||| |||||||||||| |||    
T  39567903 catgtttgcattggtttcaacaatgttttgatttttaaaaagttaaa-tttatcatttttcatcattttccaatgctatatttatatttttatcccatta 39568001  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  39568002 tccaatgccccaag 39568015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 4422076 - 4421965
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||||||||  |||||||||||||||| || ||||||| |||| ||||||| |||||||||||||||||| |||||||||||||||||||| |    
T  4422076 taacatgtttgcattgacttcaacaacattttgatttgtaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttctatttttatcctc 4421978  T
Q  381 ttatccaatgccc 393  Q
    |||||||||||||    
T  4421977 ttatccaatgccc 4421965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 8410142 - 8410253
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||| |||||||| || ||||||||||||||||||||| |||| |||||||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  8410142 catgtttgtattggttttaataacattttgacttttaaaaagttaaa-tttatcattttttaccattttctaatactatatttttatttttatcccctta 8410240  T
Q  384 tccaatgccccaa 396  Q
    || ||| ||||||    
T  8410241 tctaataccccaa 8410253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 12068283 - 12068178
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||| |||||| |||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||  ||| |    
T  12068283 catgtttgtattggtgtcaataacattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttctatttttatatcctca 12068185  T
Q  384 tccaatg 390  Q
    |||||||    
T  12068184 tccaatg 12068178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 288 - 389
Target Start/End: Original strand, 34546782 - 34546882
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    |||||||| |||||||||||||||| ||||||||||| || |||||||||| ||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  34546782 tttgcattagtttcaacaacattttaacttttaaaaa-attaaatttatcacttttcaccatttttcaatgttatatttctatttttatccccttatcca 34546880  T
Q  388 at 389  Q
    ||    
T  34546881 at 34546882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 27823279 - 27823365
Alignment:
Q  304 caacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 391  Q
    ||||||||| | |||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27823279 caacattttaatttttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttctatttttatccccttatccaatgc 27823365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 285 - 390
Target Start/End: Complemental strand, 3639182 - 3639079
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||||||||||||||||||| |||| |||||||||||| || |||||||||| | ||||||||||||||||  |||||||||||||||||||||||||    
T  3639182 atgtttgcattggtttcaacaatattt-gacttttaaaaa-attaaatttatcactcttcaccattttccaatgttatatttctatttttatccccttat 3639085  T
Q  385 ccaatg 390  Q
     |||||    
T  3639084 tcaatg 3639079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 28143232 - 28143120
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||| ||| |||||||||||||||||| |||||||||| |||| ||||| |||||||||||||| |||||  |||||||||||||||||| |||||    
T  28143232 catgtttgtattagtttcaacaacattttgatttttaaaaagttaaa-tttattatttttcaccatttcccaatgttatatttctatttttatctcctta 28143134  T
Q  384 tccaatgccccaag 397  Q
    | ||||| ||||||    
T  28143133 ttcaatgtcccaag 28143120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 288 - 397
Target Start/End: Original strand, 35945250 - 35945358
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    |||||||| |||||||||||||||| || ||||||||| |||| ||||||| ||||||| ||||||||||  ||||||||||||||||| ||||||||||    
T  35945250 tttgcattagtttcaacaacattttaacatttaaaaagttaaa-tttatcacttttcactattttccaatgttatatttctatttttattcccttatcca 35945348  T
Q  388 atgccccaag 397  Q
    || |||||||    
T  35945349 ataccccaag 35945358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 293 - 397
Target Start/End: Complemental strand, 1479236 - 1479133
Alignment:
Q  293 attggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgcc 392  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||| ||||||  ||||| |||| |||||||||||||||||||||||||| |||||||    
T  1479236 attggtttcaataacattttgacttttaaaaagttaaa-tttatcacttttcattatttttcaatgctatatttctatttttatccccttattcaatgcc 1479138  T
Q  393 ccaag 397  Q
     ||||    
T  1479137 tcaag 1479133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 284 - 372
Target Start/End: Complemental strand, 13951345 - 13951258
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattt 372  Q
    |||| |||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| |||| ||||||||||||||    
T  13951345 catgcttgcattggtttcaacaacattttgacttttaaaaaaat-aaatttatcacttttcaccatttttcaatgctatatttctattt 13951258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 338873 - 338761
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||| |||||||||| ||||||| |||||||||| |||| ||||||| |||| | |||||| |||||  |||||| |||||||||||| |||    
T  338873 catgtttgcatttgtttcaacaatattttgatttttaaaaagttaaa-tttatcactttttatcatttttcaatatcatatttttatttttatcccttta 338775  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  338774 tccaatgccccaag 338761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 4962625 - 4962514
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||| ||| |||||||||||||||||||||| |||||| |||| ||||||| |||||| |||||||||||  |||||||||||||||||  |||||    
T  4962625 catgtttgtattagtttcaacaacattttgactttaaaaaagttaaa-tttatcacttttcatcattttccaatgttatatttctatttttat-tcctta 4962528  T
Q  384 tccaatgccccaag 397  Q
    ||||||| ||||||    
T  4962527 tccaatgtcccaag 4962514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 281 - 382
Target Start/End: Complemental strand, 25568404 - 25568304
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| | |||| ||||| |||||| |||||| |||| |||||||| |||||||||||||    
T  25568404 taacatgtttgcattggtttcaataacattttgatttttaaaaag-ttaaatgtatcacttttcatcatttttcaatgctatatttatatttttatcccc 25568306  T
Q  381 tt 382  Q
    ||    
T  25568305 tt 25568304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 15915876 - 15915944
Alignment:
Q  329 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  15915876 aaatttatcacttttcaccattttccaatgctatatttctatttttattcccttatccaatgccccaag 15915944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 289 - 397
Target Start/End: Original strand, 37243852 - 37243958
Alignment:
Q  289 ttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaa 388  Q
    |||||||| ||||||||||||||| | |||||||||| |||| ||||||| ||||||||||||||||||| ||||||| ||||||||| || ||||||||    
T  37243852 ttgcattgatttcaacaacattttaatttttaaaaagttaaa-tttatcacttttcaccattttccaatattatatttttatttttat-cctttatccaa 37243949  T
Q  389 tgccccaag 397  Q
    |||| ||||    
T  37243950 tgcctcaag 37243958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 285 - 390
Target Start/End: Complemental strand, 10017727 - 10017626
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||||||||||||| ||||||||||| |||||||||||| |   |||||||| ||||||||| |||||| |||||||||||||||||||||| |||||    
T  10017727 atgtttgcattggttttaacaacattttaacttttaaaaagtt---atttatcaattttcacca-tttccagtactatatttctatttttatcctcttat 10017632  T
Q  385 ccaatg 390  Q
    | ||||    
T  10017631 caaatg 10017626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 285 - 371
Target Start/End: Original strand, 12914176 - 12914261
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatt 371  Q
    |||||||||||||||||||||| ||||||| ||||||||| || |||||||||| ||||||||||||| |||| |||||||||||||    
T  12914176 atgtttgcattggtttcaacaatattttgatttttaaaaa-attaaatttatcacttttcaccatttttcaatgctatatttctatt 12914261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 479 - 592
Target Start/End: Original strand, 1738973 - 1739080
Alignment:
Q  479 ttttccaaataacaacaaagaagggaaagatgaaaattagaacaagaacaaagagaaaaatttggattcaaggtctttttcatgtttattttgcaagaga 578  Q
    ||||||||||||||||||  |||||||||||||      |||||||||  | ||||||||  ||||||||||| |||||||||| |||||||||||| ||    
T  1738973 ttttccaaataacaacaataaagggaaagatga------gaacaagaatgaggagaaaaaaatggattcaaggactttttcatgcttattttgcaaggga 1739066  T
Q  579 aaatttgctacttc 592  Q
    |||||| |||||||    
T  1739067 aaattttctacttc 1739080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 529 - 595
Target Start/End: Original strand, 1744360 - 1744426
Alignment:
Q  529 aagagaaaaatttggattcaaggtctttttcatgtttattttgcaagagaaaatttgctacttcaca 595  Q
    ||||||||||  |||||||||||||||||||||| |||||||||||| |||||||| ||||||||||    
T  1744360 aagagaaaaaaatggattcaaggtctttttcatgcttattttgcaagggaaaattttctacttcaca 1744426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 288 - 373
Target Start/End: Complemental strand, 6823858 - 6823773
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttt 373  Q
    |||||||||| |||||||| ||||| |||||||||||| |||||||||| | ||| |||| |||||| |||| |||||||||||||    
T  6823858 tttgcattggattcaacaatattttaacttttaaaaagttaaaatttattactttccaccgttttccgatacaatatttctatttt 6823773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 285 - 392
Target Start/End: Original strand, 27535098 - 27535202
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    ||||||||||||| |||||||   |||| |||||||||||  ||||||| |||| ||||||||||||| |||||| |||||| |||||||||||  ||||    
T  27535098 atgtttgcattggattcaaca---ttttaacttttaaaaacttaaaattcatcacttttcaccatttttcaatacaatatttatatttttatccttttat 27535194  T
Q  385 ccaatgcc 392  Q
     |||||||    
T  27535195 tcaatgcc 27535202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 281 - 365
Target Start/End: Original strand, 39693007 - 39693090
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatt 365  Q
    ||||||||||| |||| ||||||||| ||||| |||||||||||||| ||||||||||||||| |||| ||| |||| |||||||    
T  39693007 taacatgtttgtattgatttcaacaatattttaacttttaaaaagat-aaatttatcattttttaccacttttcaatgctatatt 39693090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 549 - 597
Target Start/End: Original strand, 1724448 - 1724496
Alignment:
Q  549 aggtctttttcatgtttattttgcaagagaaaatttgctacttcacagg 597  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  1724448 aggtctttttcatgcttattttgcaagagaaaattttctacttcacagg 1724496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 371
Target Start/End: Original strand, 10406785 - 10406873
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatt 371  Q
    |||||| |||||||||| |||||||| ||||||| ||| |||||  | |||||||||| ||||| ||||||| |||||| |||||||||||    
T  10406785 taacatttttgcattggattcaacaatattttgaatttaaaaaa--ttaaatttatcacttttctccatttttcaatacaatatttctatt 10406873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 281 - 327
Target Start/End: Original strand, 4838278 - 4838324
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagat 327  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  4838278 taacatgtttgcattagtttcaacaatattttgacttttaaaaagat 4838324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 285 - 366
Target Start/End: Complemental strand, 16899680 - 16899599
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatattt 366  Q
    ||||||| ||||| ||||||||||||||||||||||||||| ||||||| || | |||||| | ||| |||| || ||||||    
T  16899680 atgtttgtattggattcaacaacattttgacttttaaaaagttaaaattcattacttttcatcctttcccaacacaatattt 16899599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 299 - 377
Target Start/End: Complemental strand, 3015144 - 3015067
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 377  Q
    |||||||| ||||| |||||||||||| |||| || |||||||| ||| |||||| || || |||||||||||||||||    
T  3015144 ttcaacaatattttaacttttaaaaagttaaa-ttaatcattttacactattttctaacacaatatttctatttttatc 3015067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 39335474 - 39335519
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaa 330  Q
    ||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  39335474 atgtttgtattggattcaacaacattttgacttttaaaaagttaaa 39335519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 288 - 371
Target Start/End: Complemental strand, 28599759 - 28599677
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatt 371  Q
    |||||||||  ||||| ||  |||| |||||||||||| | |||||||||||||||||| |||||||||||  |||||| ||||    
T  28599759 tttgcattgaattcaataaatttttaacttttaaaaag-tcaaatttatcatttttcactattttccaatataatatttttatt 28599677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 379
Target Start/End: Complemental strand, 39042128 - 39042050
Alignment:
Q  300 tcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccc 379  Q
    ||||||||||||| ||||||||||| || ||||| | |||||||||  ||||| ||||  ||||||| ||||||||||||    
T  39042128 tcaacaacattttaacttttaaaaa-attaaattaaccatttttcattattttacaatgttatatttttatttttatccc 39042050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 397
Target Start/End: Original strand, 40099363 - 40099443
Alignment:
Q  316 ttttaaaaagataaaatttatcatttttcacca-ttttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    |||| ||||| | |||||||||| ||||||||| |||| |||| |||||||| ||||||  ||||||||||||||||| ||||    
T  40099363 tttttaaaaggttaaatttatcacttttcaccattttttcaatgctatatttttatttt--tccccttatccaatgccacaag 40099443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 347 - 397
Target Start/End: Complemental strand, 104976 - 104926
Alignment:
Q  347 cattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    ||||||| |||| ||||||||||||||||  |||||||||||| |||||||    
T  104976 cattttctaatattatatttctatttttactcccttatccaataccccaag 104926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 17168691 - 17168783
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgcc 392  Q
    |||| ||| ||||| | |||||||||| | ||||| ||||||||||||| |||| |||| | |||||||||||| ||||  |||| ||||||||    
T  17168691 ttcagcaatattttaaattttaaaaag-tcaaattcatcatttttcaccgtttttcaatgcaatatttctatttgtatcttcttaaccaatgcc 17168783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 372
Target Start/End: Complemental strand, 39069370 - 39069298
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattt 372  Q
    |||||||| |||||||||||||||| | | ||||| |||| ||||||| |||||||||||| || || ||||||    
T  39069370 ttcaacaatattttgacttttaaaatg-ttaaattcatcacttttcacaattttccaatacaatgttcctattt 39069298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 340 - 377
Target Start/End: Original strand, 39167650 - 39167687
Alignment:
Q  340 ttttcaccattttccaatactatatttctatttttatc 377  Q
    |||||||||||||||||||| || ||||||||||||||    
T  39167650 ttttcaccattttccaatacaatgtttctatttttatc 39167687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 3e-75; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 607 - 770
Target Start/End: Complemental strand, 13854777 - 13854614
Alignment:
Q  607 ttcactgtctccatgtttgttgaatattattatctggtaattaatttctatacatttaattaacatttcatcattttattgtgcagcatgtcttcaaaat 706  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||||||||||    
T  13854777 ttcactatctccatgtttgttgaatattattatctggtaattaatttccatagattcaattaacatttcattattttattgtgcagcatgtcttcaaaat 13854678  T
Q  707 ggagcaagaggaatatacaaaggaagagattgattggagttatatcgagtttgttgataatcaa 770  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13854677 ggagcaagaggaatatacaaaggaagagattgattggagttatatcgagtttgttgataatcaa 13854614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 34874567 - 34874679
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  34874567 catgtttgcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccattttccaatgctatatttctatttttatcccctta 34874665  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  34874666 tccaatgccccaag 34874679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 932263 - 932151
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||| |||||||||||||||||||||||||||| || |||||||| |||||||| ||||||||||| |||||||||||||||||||||||||    
T  932263 catgtttgcattagtttcaacaacattttgacttttaaaaa-attaaatttataatttttcatcattttccaatgctatatttctatttttatcccctta 932165  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  932164 tccaatgccccaag 932151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 22346343 - 22346231
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||| ||||||||||||||||| || |||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||    
T  22346343 catgtttgcattggtttcaacaatattttgacttttaaaaa-attaaatttatcacttttcaccatttttcaatactatatttctatttttattccctta 22346245  T
Q  384 tccaatgccccaag 397  Q
    ||||| ||||||||    
T  22346244 tccaaagccccaag 22346231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 41147584 - 41147472
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| || ||||||||| |||||||| |||| |||||||||||||||||||||||||    
T  41147584 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaa-ttaatcattttttaccatttttcaatgctatatttctatttttatcccctta 41147486  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  41147485 tccaatgccccaag 41147472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 42607430 - 42607326
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  42607430 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcaccatttttcaatgctatatttttatttttatcccctta 42607332  T
Q  384 tccaat 389  Q
    ||||||    
T  42607331 tccaat 42607326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 285 - 397
Target Start/End: Complemental strand, 27209826 - 27209715
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||||||||||||||  |||||||||||||||||||| ||||    
T  27209826 atgtttgcattggtttcaacaacattttaacttttaaaaagttaaa-tttatcaattttcaccattttccaatgttatatttctatttttatccctttat 27209728  T
Q  385 ccaatgccccaag 397  Q
    |||||||||||||    
T  27209727 ccaatgccccaag 27209715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 292 - 391
Target Start/End: Complemental strand, 11385908 - 11385810
Alignment:
Q  292 cattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 391  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11385908 cattggtttcaacaacattttgacttttaaaaagttaaa-tttataacttttcaccattttccaatactatatttctatttttatccccttatccaatgc 11385810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 49508839 - 49508728
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||| |||| |||||||||||||||||| |||| ||||||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  49508839 catgtttgcattggtttcgacaatattttgacttttaaaaagttaaa-tttatcacttt-caccattttccaatgctatatttctatttttatcccctta 49508742  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  49508741 tccaatgccccaag 49508728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 6170660 - 6170553
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| | |||||||||| ||||||||||||||||||| |     
T  6170660 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcatttttctctattttccaatgctatatttctatttttatctct 6170562  T
Q  381 ttatccaat 389  Q
    |||||||||    
T  6170561 ttatccaat 6170553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 285 - 397
Target Start/End: Original strand, 43433776 - 43433887
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    ||||||| |||||||||||||||||||| | |||||||||| |||| ||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  43433776 atgtttgtattggtttcaacaacattttaatttttaaaaagttaaa-tttatcacttttcaccattttttaatactatatttctatttttatccccttat 43433874  T
Q  385 ccaatgccccaag 397  Q
    |||||||||||||    
T  43433875 ccaatgccccaag 43433887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 49901926 - 49902037
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||||||| |||| || ||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  49901926 catgtttgcattggtttcaacaacgttttaacgtttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttctatttttatcctctta 49902024  T
Q  384 tccaatgccccaa 396  Q
    |||||| ||||||    
T  49902025 tccaataccccaa 49902037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 288 - 396
Target Start/End: Complemental strand, 50295535 - 50295428
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    ||||||||| ||||||||| |||||||||||||||||| |||| ||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||    
T  50295535 tttgcattgatttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcactattttccaatactatatttctatttttacccccttatcca 50295437  T
Q  388 atgccccaa 396  Q
    |||||||||    
T  50295436 atgccccaa 50295428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 47655477 - 47655372
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||| ||||| |||||||||||||||||||    
T  47655477 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcaattttcaccatttttcaatgctatacttctatttttatcccctta 47655379  T
Q  384 tccaatg 390  Q
    | |||||    
T  47655378 ttcaatg 47655372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 11385981 - 11386093
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||||||| ||||||||||||||||||||  |||    
T  11385981 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcaatttttaccattttccaatgctatatttctatttttatccaatta 11386079  T
Q  384 tccaatgccccaag 397  Q
    || |||| ||||||    
T  11386080 tctaatgtcccaag 11386093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 29966822 - 29966935
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||| ||||||||||| ||||| || |||||||||||||||  ||||||| |||| |||||||| ||||||||||||||||    
T  29966822 catgtttgcattggtttcaacaatattttgactttaaaaaaaattaaatttatcattttttgccatttttcaatgctatatttatatttttatcccctta 29966921  T
Q  384 tccaatgccccaag 397  Q
    |||||||| |||||    
T  29966922 tccaatgctccaag 29966935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 33929966 - 33930070
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| ||||| |||| |||||||| ||||||||||||||||    
T  33929966 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcagttttcactatttttcaatgctatatttatatttttatcccctta 33930064  T
Q  384 tccaat 389  Q
    ||||||    
T  33930065 tccaat 33930070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 281 - 397
Target Start/End: Complemental strand, 2125816 - 2125701
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||| ||| ||| |||||| |||||||||||||||||||||| |||| ||||||| ||||||| ||||| |||| ||||||||||||||||||||||    
T  2125816 taacatggttgtatttgtttcatcaacattttgacttttaaaaagttaaa-tttatcacttttcacaatttttcaatgctatatttctatttttatcccc 2125718  T
Q  381 ttatccaatgccccaag 397  Q
    |||||||||||||||||    
T  2125717 ttatccaatgccccaag 2125701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 24140773 - 24140883
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||  |||||||  |||||||||||||||||| ||||||||||||||||||||||||    
T  24140773 catgtttgcattggtttcaacaacattttgactttaaaaaagttaag-tttatcacgtttcaccattttccaatagtatatttctatttttatcccctta 24140871  T
Q  384 tccaatgccccaa 396  Q
    | |||||||||||    
T  24140872 t-caatgccccaa 24140883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 284 - 391
Target Start/End: Complemental strand, 4940846 - 4940740
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||| |||||||| ||||| |||||||||||||||||| |||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||    
T  4940846 catgtttgtattggttttaacaatattttgacttttaaaaagttaaa-tttatcacttttaaccattttccaatgctatatttctatttttatcccctta 4940748  T
Q  384 tccaatgc 391  Q
    ||||||||    
T  4940747 tccaatgc 4940740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 291 - 397
Target Start/End: Complemental strand, 32213988 - 32213883
Alignment:
Q  291 gcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatg 390  Q
    |||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||  | |||||||||||||||||||||||| ||||    
T  32213988 gcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccattttccaatgttctatttctatttttatccccttatctaatg 32213890  T
Q  391 ccccaag 397  Q
     ||||||    
T  32213889 tcccaag 32213883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 286 - 390
Target Start/End: Original strand, 40845253 - 40845356
Alignment:
Q  286 tgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatc 385  Q
    ||||||| ||||||||||||| ||||||| |||||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||     
T  40845253 tgtttgctttggtttcaacaatattttgatttttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttctatttttatccccttatt 40845351  T
Q  386 caatg 390  Q
    |||||    
T  40845352 caatg 40845356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 284 - 392
Target Start/End: Original strand, 52396443 - 52396549
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||| ||||||| || |||||||||||||||||| |||| ||||||| |||| | |||||| ||||||||||||||||||||||||||||||    
T  52396443 catgtttgcatttgtttcaataatattttgacttttaaaaagttaaa-tttatcactttt-atcatttttcaatactatatttctatttttatcccctta 52396540  T
Q  384 tccaatgcc 392  Q
    |||||||||    
T  52396541 tccaatgcc 52396549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 7190581 - 7190469
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||| ||||||||| |||||| |||||||||||| |||| ||||||| |||||| ||||||  ||| |||||||||||||||||||| ||||    
T  7190581 catgtttgcattagtttcaacaccattttaacttttaaaaagttaaa-tttatcacttttcatcatttttgaatgctatatttctatttttatcctctta 7190483  T
Q  384 tccaatgccccaag 397  Q
     |||||||||||||    
T  7190482 accaatgccccaag 7190469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 288 - 397
Target Start/End: Complemental strand, 28851011 - 28850904
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    |||||||||||||||||||  ||||||||||||||||| |||| ||||||| ||||||||||||||||||  ||||||||||||||||| | |||||| |    
T  28851011 tttgcattggtttcaacaat-ttttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatgttatatttctatttttattctcttatcta 28850914  T
Q  388 atgccccaag 397  Q
    ||||||||||    
T  28850913 atgccccaag 28850904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 285 - 389
Target Start/End: Complemental strand, 26469687 - 26469584
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||| |||||||||||| || |||||||||||||||||| |||| ||||||||||||||  ||||| |||| |||||||| |||||||||||| ||||    
T  26469687 atgttttcattggtttcaataatattttgacttttaaaaagttaaa-tttatcatttttcattatttttcaatgctatatttttatttttatccctttat 26469589  T
Q  385 ccaat 389  Q
    |||||    
T  26469588 ccaat 26469584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 281 - 389
Target Start/End: Complemental strand, 28277591 - 28277484
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    |||||||||||||||| ||||||||||||||| | |||||||||| | |||||||||| |||| | |||||| ||||  ||||||||||||||||||| |    
T  28277591 taacatgtttgcattgttttcaacaacattttaatttttaaaaag-ttaaatttatcactttttatcatttttcaatgttatatttctatttttatcctc 28277493  T
Q  381 ttatccaat 389  Q
    |||||||||    
T  28277492 ttatccaat 28277484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 281 - 377
Target Start/End: Original strand, 50154470 - 50154565
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 377  Q
    |||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||| | |||||| |||| |||||||| ||||||||||    
T  50154470 taacatgtttgcattggtttcaacaacattttaactttt-aaaaggttaaatttatcattttttatcatttttcaatgctatatttatatttttatc 50154565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 281 - 397
Target Start/End: Original strand, 44286869 - 44286984
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    |||||||||||||||||||| || || ||||| | |||||||||| |||| ||||||||||||||| ||| || |||||| ||||| |||||||||||      
T  44286869 taacatgtttgcattggttttaataatattttaatttttaaaaagttaaa-tttatcatttttcactattctctaatactgtatttttatttttatcctt 44286967  T
Q  381 ttatccaatgccccaag 397  Q
    ||||  |||||||||||    
T  44286968 ttatataatgccccaag 44286984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 305 - 397
Target Start/End: Original strand, 45721773 - 45721864
Alignment:
Q  305 aacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    |||||||||| |||||||||| |||| ||||||| |||| |||||||||||||  ||||||| |||||||||| ||||||||||||| |||||    
T  45721773 aacattttgatttttaaaaagttaaa-tttatcagtttttaccattttccaatgttatatttttatttttatcaccttatccaatgctccaag 45721864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 281 - 364
Target Start/End: Original strand, 47895331 - 47895413
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatat 364  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||| | ||||||||||  |||||||||||| |||||||||||    
T  47895331 taacatgtttgcattagtttcaacaatattttgacatttaaaaag-ttaaatttatcacctttcaccatttttcaatactatat 47895413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 288 - 390
Target Start/End: Original strand, 4656020 - 4656121
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    |||||||| |||||||||||||||| | |||||||||| |||| ||||||| |||| || ||||||||||  ||||||| |||||||||  |||||||||    
T  4656020 tttgcattagtttcaacaacattttaatttttaaaaagttaaa-tttatcactttttactattttccaatgttatatttttatttttatttccttatcca 4656118  T
Q  388 atg 390  Q
    |||    
T  4656119 atg 4656121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 311 - 397
Target Start/End: Original strand, 5945447 - 5945532
Alignment:
Q  311 ttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||   ||||||||||||||||  | ||||||||||| |||||    
T  5945447 ttgacttttaaaaag-taaaatttatcacttttcaccatttttcaatgtcatatttctatttttatttcgttatccaatgctccaag 5945532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 299 - 397
Target Start/End: Original strand, 14331852 - 14331949
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    ||||||||  ||||||||||||||||| |||| | | |||||||||||||||| ||||||| || ||||||||||||||   ||| |||||||||||||    
T  14331852 ttcaacaatgttttgacttttaaaaagttaaattct-tcatttttcaccatttcccaatacaatgtttctatttttatcattttaaccaatgccccaag 14331949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 299 - 397
Target Start/End: Original strand, 16691309 - 16691406
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    ||||||||  ||||||||||||||||| |||| | | |||||||| ||||||| ||||||| || ||||||||||||||  |||| |||||||||||||    
T  16691309 ttcaacaatgttttgacttttaaaaagttaaattct-tcattttttaccatttcccaatacaatgtttctatttttatcatcttaaccaatgccccaag 16691406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 299 - 393
Target Start/End: Original strand, 17402963 - 17403056
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccc 393  Q
    |||||||| |||||||||||||||||| |||| || |||| |||| ||||||||  ||||| ||||||  ||||||||||||||| |||||||||    
T  17402963 ttcaacaatattttgacttttaaaaagttaaa-ttcatcactttttaccattttttaatacaatattttaatttttatccccttaaccaatgccc 17403056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 31975484 - 31975591
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||||||| |||| ||||| ||||||| |||||||||| | ||||||| || |||| | |||||| ||||  ||||||||||||| |||| |     
T  31975484 taacatgtttgcattagttttaacaatattttgatttttaaaaag-ttaaatttaccactttttatcatttttcaatgttatatttctatttatatctct 31975582  T
Q  381 ttatccaat 389  Q
    |||||||||    
T  31975583 ttatccaat 31975591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 299 - 377
Target Start/End: Original strand, 48938651 - 48938727
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 377  Q
    ||||||||  |||||||||||||||||   |||||| ||| |||||||||||||| ||||| |||||||||||||||||    
T  48938651 ttcaacaatgttttgacttttaaaaagt--aaatttttcacttttcaccattttctaatacaatatttctatttttatc 48938727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 347 - 397
Target Start/End: Original strand, 8244150 - 8244200
Alignment:
Q  347 cattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  8244150 cattttccaatgttatatttctatatttatccccttatccaatgccccaag 8244200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 299 - 393
Target Start/End: Original strand, 43168156 - 43168249
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccc 393  Q
    ||||||||  ||||||||||||||||| |||| | | ||| |||||||||||| ||||||| || ||||||||||||||  |||| |||||||||    
T  43168156 ttcaacaatgttttgacttttaaaaagttaaactct-tcacttttcaccatttcccaatacaatgtttctatttttatcatcttaaccaatgccc 43168249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 288 - 361
Target Start/End: Original strand, 30222624 - 30222697
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatacta 361  Q
    ||||||||||||||||||| ||||| |||||| |||| || |||||||||| ||| || ||||||| |||||||    
T  30222624 tttgcattggtttcaacaatattttaactttttaaaaaattaaatttatcactttccatcattttctaatacta 30222697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 683 - 770
Target Start/End: Complemental strand, 29900289 - 29900202
Alignment:
Q  683 tattgtgcagcatgtcttcaaaatggagcaagaggaatatacaaaggaagagattgattggagttatatcgagtttgttgataatcaa 770  Q
    |||| |||||||||| ||||||||||||||||| || || |  || || ||||||||||||||||| || || |||||||| ||||||    
T  29900289 tattctgcagcatgttttcaaaatggagcaagaagagtacaagaaagaggagattgattggagttacattgaatttgttgacaatcaa 29900202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 299 - 397
Target Start/End: Complemental strand, 44359763 - 44359666
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    ||||||||  ||||||||||||||||| |||| | | ||| |||||||||||| || |||| || ||||||||||||||  |||| |||||| ||||||    
T  44359763 ttcaacaatgttttgacttttaaaaagttaaattct-tcacttttcaccatttcccgatacaatgtttctatttttatcatcttaaccaatggcccaag 44359666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 390
Target Start/End: Original strand, 40920189 - 40920292
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcat--ttttcaccattttccaatactatatttctatttttatccccttatc 385  Q
    |||||||||| |||||||| ||||| |||||||||||| |||| || ||||   ||||||||| ||  |||| | |||||||||||||||||| |||| |    
T  40920189 tttgcattggattcaacaatattttaacttttaaaaagttaaa-ttaatcacacttttcaccacttctcaatgcaatatttctatttttatcctcttaac 40920287  T
Q  386 caatg 390  Q
    |||||    
T  40920288 caatg 40920292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 41492912 - 41493015
Alignment:
Q  287 gtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcc 386  Q
    |||||||| || |||| ||| ||||| |||||||||| | ||||||| |||| ||||||||| || ||||| | ||||||||| |||||||| |||| ||    
T  41492912 gtttgcatgggattcatcaatattttaacttttaaaatg-taaaattcatcacttttcaccacttcccaatgcaatatttcta-ttttatcctcttaacc 41493009  T
Q  387 aatgcc 392  Q
    ||||||    
T  41493010 aatgcc 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 372
Target Start/End: Complemental strand, 41898950 - 41898878
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattt 372  Q
    |||||||| ||||| |||||||||||| |||| || |||| |||| |||||||| |||||| ||||||||||||    
T  41898950 ttcaacaatattttaacttttaaaaagttaaa-ttcatcactttttaccatttttcaatacaatatttctattt 41898878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 8892852 - 8892785
Alignment:
Q  309 ttttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 377  Q
    ||||||||||||||||| |||| | | | | |||||||||||||||||||| || ||||||||||||||    
T  8892852 ttttgacttttaaaaagttaaattcttt-acttttcaccattttccaatacgatgtttctatttttatc 8892785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 27210750 - 27210823
Alignment:
Q  309 ttttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||| |||||||||||| |||| || |||||||||||||||||| || ||| ||| || ||||||||||| ||||    
T  27210750 ttttaacttttaaaaagttaaa-ttgatcatttttcaccatttttcattacaatagttttatttttatcctctta 27210823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 357 - 391
Target Start/End: Original strand, 30222991 - 30223025
Alignment:
Q  357 tactatatttctatttttatccccttatccaatgc 391  Q
    |||||||||| ||||||||||||||||||||||||    
T  30222991 tactatatttatatttttatccccttatccaatgc 30223025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 688 - 770
Target Start/End: Complemental strand, 31187435 - 31187353
Alignment:
Q  688 tgcagcatgtcttcaaaatggagcaagaggaatatacaaaggaagagattgattggagttatatcgagtttgttgataatcaa 770  Q
    ||||||| || || || ||||||||||||||||| ||||| |||| |||||||||||| ||  | || ||||| |||||||||    
T  31187435 tgcagcacgtttttaacatggagcaagaggaatacacaaaagaagggattgattggagctacttagaatttgtagataatcaa 31187353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 688 - 745
Target Start/End: Complemental strand, 31009611 - 31009554
Alignment:
Q  688 tgcagcatgtcttcaaaatggagcaagaggaatatacaaaggaagagattgattggag 745  Q
    ||||||| || || || ||||||||||||||||| ||||| |||| ||||||||||||    
T  31009611 tgcagcacgtttttaagatggagcaagaggaatacacaaaagaagcgattgattggag 31009554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 2e-45; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 35808505 - 35808393
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  35808505 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcacaattttccaatgctatatttctatttttatcccctta 35808407  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  35808406 tccaatgccccaag 35808393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 55669739 - 55669851
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  55669739 catgtttgcattgtttttaacaacattttgacttttaaaaagttaaa-tttatcatttttcaccattttccaatgctatatttctatttttatcccctta 55669837  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  55669838 tccaatgccccaag 55669851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 285 - 397
Target Start/End: Original strand, 2362630 - 2362743
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaaga-taaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||| ||||||||||||||||||||||| | | |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  2362630 atgtttgcattggttttaacaacattttgacttttaaaaaaaattaaatttatcacttttcaccattttccaatactatatttttatttttatcccctta 2362729  T
Q  384 tccaatgccccaag 397  Q
    ||| ||||||||||    
T  2362730 tccgatgccccaag 2362743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 288 - 397
Target Start/End: Complemental strand, 26040465 - 26040357
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    |||||||||| |||||||| |||||||||||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26040465 tttgcattggcttcaacaatattttgacttttaaaaagttaaactt-atcacttttcaccattttccaatactatatttctatttttatccccttatcca 26040367  T
Q  388 atgccccaag 397  Q
    ||||||||||    
T  26040366 atgccccaag 26040357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 671 - 771
Target Start/End: Original strand, 34392224 - 34392323
Alignment:
Q  671 atttcatcattttattgtgcagcatgtcttcaaaatggagcaagaggaatatacaaaggaagagattgattggagttatatcgagtttgttgataatcaa 770  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  34392224 atttcattattttattgtgcagcatgtcttcaaaatggagcaagagaaatatac-aaggaagagattgattggagttatatcgagttcgttgataatcaa 34392322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 281 - 390
Target Start/End: Original strand, 32131139 - 32131247
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| || ||||||||||||||||||||||||||||||||||| |     
T  32131139 taacatgtttgcattggtttcaacaacatcttgacttttaaaaagttaaa-tttatcacttatcaccattttccaatactatatttctatttttatctct 32131237  T
Q  381 ttatccaatg 390  Q
    ||||||||||    
T  32131238 ttatccaatg 32131247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 34016626 - 34016730
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  34016626 atgtttgcattgatttcaacaacattttgacttttaaaaagttaaa-ttcatcacttttcaccattttccaatgctatatttctatttttatccccttat 34016724  T
Q  385 ccaatg 390  Q
    ||||||    
T  34016725 ccaatg 34016730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 41956322 - 41956210
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||  ||||||||||||||||||| ||||    
T  41956322 catgtttgcattggcttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcatcattttccaatgttatatttctatttttatcctctta 41956224  T
Q  384 tccaatgccccaag 397  Q
    ||| ||||||||||    
T  41956223 tccgatgccccaag 41956210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 281 - 397
Target Start/End: Complemental strand, 10100225 - 10100110
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| | |||||||||||||| |||| ||||||| |||||||||||||    
T  10100225 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttataacttttcaccattttctaatattatatttatatttttatcccc 10100127  T
Q  381 ttatccaatgccccaag 397  Q
    |||||| ||| ||||||    
T  10100126 ttatccgatgtcccaag 10100110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 23765578 - 23765689
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| |||||||||||||||||| ||||||||| |||||||||||||||    
T  23765578 catgtttgcattggtttcaacaacattttgatttttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttcaatttttatcccctta 23765676  T
Q  384 tccaatgccccaa 396  Q
    || ||||| ||||    
T  23765677 tctaatgcaccaa 23765689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 51266924 - 51267029
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||| |||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  51266924 catgtttgtattgatttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttctatttttatctcctta 51267022  T
Q  384 tccaatg 390  Q
    |||||||    
T  51267023 tccaatg 51267029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 27839415 - 27839303
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||| || ||||||||||||||||||||  |||| |||||||||||||| |||||| |||| |||||||||||||||||| ||||||    
T  27839415 catgtttgcattggttttaataacattttgacttttaaaaacttaaa-tttatcatttttcatcatttttcaatgctatatttctatttttattccctta 27839317  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  27839316 tccaatgccccaag 27839303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 34316832 - 34316719
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| ||||| ||||  ||||||| |||||||||| |||||    
T  34316832 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaattttatcacttttcactatttttcaatgttatatttatatttttatctcctta 34316733  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  34316732 tccaatgccccaag 34316719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 45688743 - 45688855
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||| |||||| |||||| |||| |||| ||||||||||||||||||||    
T  45688743 catgtttgcattagtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcatcatttttcaatgctatgtttctatttttatcccctta 45688841  T
Q  384 tccaatgccccaag 397  Q
    |||||| |||||||    
T  45688842 tccaataccccaag 45688855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 31754938 - 31755049
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||| |||||| |||||| |||| |||||||| ||||||||||||||||    
T  31754938 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcatcatttttcaattctatatttatatttttatcccctta 31755036  T
Q  384 tccaatgccccaa 396  Q
    |||||| ||||||    
T  31755037 tccaataccccaa 31755049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 281 - 389
Target Start/End: Original strand, 33951697 - 33951804
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||| |||||||||||||||||||| | |||||||||| |||| ||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  33951697 taacatgtttgtattggtttcaacaacattttaatttttaaaaagttaaa-tttatcacttttcacaattttccaatactatatttctatttttatcccc 33951795  T
Q  381 ttatccaat 389  Q
    |||| ||||    
T  33951796 ttattcaat 33951804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 285 - 389
Target Start/End: Original strand, 30475426 - 30475529
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||| ||||||| ||||||||||||| ||||||||||||| |||||||||| ||||||    
T  30475426 atgtttgcattggtttcaacaatattttgacatttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttttatttttatctccttat 30475524  T
Q  385 ccaat 389  Q
    |||||    
T  30475525 ccaat 30475529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 26831894 - 26831783
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||| ||||||||||||||| | ||||||||||||||| ||||||| |||| |||||||| ||||| ||||||||||||||||||| ||||    
T  26831894 catgtttgcattg-tttcaacaacattttaatttttaaaaagataaa-tttatcactttttaccattttacaatattatatttctatttttatcctctta 26831797  T
Q  384 tccaatgccccaag 397  Q
    | ||||||||||||    
T  26831796 ttcaatgccccaag 26831783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 284 - 384
Target Start/End: Original strand, 20811263 - 20811362
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||| ||||||||| ||||||||  ||||||||||||||||||||||||    
T  20811263 catgtttgcattgattttaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccaatttccaatgttatatttctatttttatcccctta 20811361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 285 - 397
Target Start/End: Original strand, 31168135 - 31168246
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||| ||||||||||||||||||||||||||| ||||| || |||||||||| |||||||||||||||||| ||| | |||||||||||||||||| |    
T  31168135 atgtttacattggtttcaacaacattttgactttaaaaaa-attaaatttatcacttttcaccattttccaatgctaaaattctatttttatccccttgt 31168233  T
Q  385 ccaatgccccaag 397  Q
    | ||||| |||||    
T  31168234 ctaatgctccaag 31168246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 284 - 372
Target Start/End: Complemental strand, 19329037 - 19328950
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattt 372  Q
    ||||||||||||||||||||||| |||||||||||||||||| | ||||||||||  ||||||||||||||||| ||||||||||||||    
T  19329037 catgtttgcattggtttcaacaatattttgacttttaaaaag-ttaaatttatcacatttcaccattttccaatgctatatttctattt 19328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 50514722 - 50514618
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||||||||| |||||||||||| | |||||||||| |||| |||||||| ||||  |||||||||| |||||||| ||||    
T  50514722 catgtttgcattggtttcaacaacattttaacttttaaaaag-ttaaatttatcactttttaccatttttcaatgttatatttcta-ttttatcctctta 50514625  T
Q  384 tccaatg 390  Q
    |||||||    
T  50514624 tccaatg 50514618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 47188774 - 47188695
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatat 364  Q
    |||||||||||||||||||||||||||||||||||| | ||| | |||||||||| |||||||||||||||||||||||||    
T  47188774 catgtttgcattggtttcaacaacattttgactttttagaag-ttaaatttatcacttttcaccattttccaatactatat 47188695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 292 - 396
Target Start/End: Original strand, 54339121 - 54339223
Alignment:
Q  292 cattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 391  Q
    |||||||||||| || ||||||||||||||||| || |||||||||||||| ||||||||| ||||  ||||||| |||||||||||| |||||||||||    
T  54339121 cattggtttcaaaaatattttgacttttaaaaa-attaaatttatcatttt-caccatttttcaatgttatatttatatttttatccctttatccaatgc 54339218  T
Q  392 cccaa 396  Q
    |||||    
T  54339219 cccaa 54339223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 329 - 391
Target Start/End: Complemental strand, 19876248 - 19876186
Alignment:
Q  329 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 391  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19876248 aaatttatcacttttcactattttccaatactatatttctatttttatccccttatccaatgc 19876186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 285 - 378
Target Start/End: Original strand, 52341602 - 52341694
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcc 378  Q
    ||||||||||||| ||||||||||||||||||||||||||| | ||||| ||||||||||| |||||||||| |  |||||||||||| |||||    
T  52341602 atgtttgcattggattcaacaacattttgacttttaaaaag-ttaaattcatcatttttcatcattttccaacataatatttctatttgtatcc 52341694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 285 - 397
Target Start/End: Complemental strand, 35675298 - 35675187
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    ||||||||||||  |||||||| ||||| |||||||||||| |||| || |||| ||||||| |||| ||||||| |||||||||||||||||  ||||     
T  35675298 atgtttgcattgaattcaacaatattttaacttttaaaaagttaaa-ttcatcacttttcactatttcccaatacaatatttctatttttatcgtcttaa 35675200  T
Q  385 ccaatgccccaag 397  Q
    |||||||||||||    
T  35675199 ccaatgccccaag 35675187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 285 - 393
Target Start/End: Original strand, 29462802 - 29462909
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||| |||||| |||||||||||||||||||| ||||| ||||||||  |||||||||| |||||| |||||  |||||| ||||||||||| ||||     
T  29462802 atgtttacattggattcaacaacattttgactttgaaaaa-ataaaattcctcatttttcatcatttttcaatataatatttttatttttatcctcttaa 29462900  T
Q  385 ccaatgccc 393  Q
     ||||||||    
T  29462901 acaatgccc 29462909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 40436081 - 40436192
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||| ||||||||||||| |||||||  ||||||||| |||| ||||| |||||||| ||||||  ||| |||| |||  |||||||||||||||    
T  40436081 catgtttgctttggtttcaacaatattttgatatttaaaaagttaaa-tttattatttttcatcattttttaatgctattttttcatttttatcccctta 40436179  T
Q  384 tccaatgccccaa 396  Q
    ||||||| |||||    
T  40436180 tccaatgtcccaa 40436192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 51290474 - 51290542
Alignment:
Q  329 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    |||||||||| |||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  51290474 aaatttatcacttttcatcattttccaatgctatatttctaattttatccccttatccaatgtcccaag 51290542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 396
Target Start/End: Complemental strand, 53567062 - 53566948
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaat--ttatcatttttcaccattttccaatactatatttctatttttatcccct 381  Q
    |||||||||||  |||||||||||||||| |||||||||||| |||| |  |||  | |||| || ||||| |||| ||||||||||||||||||| | |    
T  53567062 catgtttgcatgagtttcaacaacattttaacttttaaaaagttaaatttattagtactttttactatttttcaatgctatatttctatttttatctctt 53566963  T
Q  382 tatccaatgccccaa 396  Q
    || ||||||||||||    
T  53566962 taaccaatgccccaa 53566948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 46696026 - 46695960
Alignment:
Q  330 aatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaa 396  Q
    ||||||||| ||||||||||||| |||| |||||||| ||||||||||| |||||||||| ||||||    
T  46696026 aatttatcacttttcaccatttttcaatcctatatttttatttttatccacttatccaataccccaa 46695960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 13498224 - 13498120
Alignment:
Q  286 tgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatc 385  Q
    ||||| |||||| ||||||||  ||||||||||||||||| |||| || ||| || || || |||||||||||| |||||||||||||||||  |||| |    
T  13498224 tgtttacattggattcaacaaagttttgacttttaaaaagttaaa-ttcatcgttctttactattttccaatacaatatttctatttttatcatcttaac 13498126  T
Q  386 caatgc 391  Q
    ||||||    
T  13498125 caatgc 13498120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 9693446 - 9693380
Alignment:
Q  329 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaa 396  Q
    ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||||| ||||    
T  9693446 aaatttatcatttttcacctttttc-aatattatatctttatttttatccccttatccaatgcgccaa 9693380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 306 - 397
Target Start/End: Original strand, 31487743 - 31487833
Alignment:
Q  306 acattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    |||||||||  ||||||||| | |||||||||| |||| || ||||| |||| |||||||| ||||||||||||||||| |||||| |||||    
T  31487743 acattttgatctttaaaaag-tcaaatttatcacttttaactatttttcaatgctatatttttatttttatccccttattcaatgctccaag 31487833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 688 - 763
Target Start/End: Complemental strand, 52153120 - 52153045
Alignment:
Q  688 tgcagcatgtcttcaaaatggagcaagaggaatatacaaaggaagagattgattggagttatatcgagtttgttga 763  Q
    |||||||||||||||||||||| ||||| ||||| || || ||||| || ||||||||||| || |||||||||||    
T  52153120 tgcagcatgtcttcaaaatggaacaagaagaatacaccaaagaagaaatcgattggagttacatagagtttgttga 52153045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 309 - 390
Target Start/End: Complemental strand, 35511264 - 35511184
Alignment:
Q  309 ttttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatg 390  Q
    |||| |||||||||||| | ||||| |||| |||||||||||||||||||| ||||||||||||| |||  |||| ||||||    
T  35511264 ttttaacttttaaaaag-tcaaattcatcacttttcaccattttccaatacaatatttctattttcatctacttaaccaatg 35511184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 287 - 378
Target Start/End: Original strand, 3769816 - 3769906
Alignment:
Q  287 gtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcc 378  Q
    ||||||||||  || ||||| ||||| |||||||||||| | |||||||||| ||||||||||||| |||| | |||||||||  |||||||    
T  3769816 gtttgcattgaatttaacaatattttaacttttaaaaag-tcaaatttatcacttttcaccatttttcaatgcaatatttctaaatttatcc 3769906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 285 - 366
Target Start/End: Original strand, 45088071 - 45088148
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatattt 366  Q
    |||||||||||| ||||||||   |||||||||| ||||| || |||||||||| |||||| ||||||||||| ||||||||    
T  45088071 atgtttgcattgatttcaaca---ttttgactttcaaaaa-attaaatttatcacttttcatcattttccaatgctatattt 45088148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 330
Target Start/End: Complemental strand, 9693580 - 9693534
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaa 330  Q
    ||||||||||||||||||||||| |||| ||||||||||||| ||||    
T  9693580 catgtttgcattggtttcaacaatatttcgacttttaaaaagttaaa 9693534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 289 - 393
Target Start/End: Original strand, 30617954 - 30618057
Alignment:
Q  289 ttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaa 388  Q
    ||||||||| |||||||| ||||  |||||||||||| | ||||| ||   |||||| ||||| ||||| | |||||||||| ||||||| |||| ||||    
T  30617954 ttgcattggattcaacaatatttgaacttttaaaaag-ttaaattcattgcttttcatcatttcccaatgcaatatttctatgtttatcctcttaaccaa 30618052  T
Q  389 tgccc 393  Q
    |||||    
T  30618053 tgccc 30618057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 309 - 377
Target Start/End: Original strand, 52895749 - 52895816
Alignment:
Q  309 ttttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 377  Q
    ||||||||||||||||| |||||||| ||| ||||||| ||||  |||||| || ||||||||||||||    
T  52895749 ttttgacttttaaaaagttaaaattt-tcacttttcacaatttctcaatacaatgtttctatttttatc 52895816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 285 - 368
Target Start/End: Original strand, 15986267 - 15986349
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttct 368  Q
    ||||||||||||  |||||||| ||| |||||||||||||  | ||||| | || ||||||||||||| |||||| ||||||||    
T  15986267 atgtttgcattgaattcaacaatattctgacttttaaaaa-tttaaattcaccacttttcaccatttttcaatacaatatttct 15986349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 347 - 397
Target Start/End: Complemental strand, 16560041 - 16559991
Alignment:
Q  347 cattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    |||||||||| || | |||||||||||||| || |||||||||||||||||    
T  16560041 cattttccaacacaaaatttctatttttattcctttatccaatgccccaag 16559991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 20456569 - 20456670
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||  |||||||| ||||| || ||||||||  |||| || || | |||||| |||||| |||||  | |||||||||||||||| ||||    
T  20456569 catgtttgcattgaattcaacaatattttaacatttaaaaatttaaa-ttcataacttttcatcatttttcaataaaacatttctatttttatcctctta 20456667  T
Q  384 tcc 386  Q
    |||    
T  20456668 tcc 20456670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 288 - 374
Target Start/End: Complemental strand, 35927379 - 35927294
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt 374  Q
    |||||||| | |||||||| ||||| |||||||||||| | ||||| ||| ||||||||||||||| ||| | | ||| ||||||||    
T  35927379 tttgcattagattcaacaatattttaacttttaaaaag-ttaaattcatcgtttttcaccattttctaatgcaaaattgctattttt 35927294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 299 - 377
Target Start/End: Complemental strand, 36486780 - 36486703
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 377  Q
    ||||| || ||||||||||||||||| || |||||  ||| |||||||||||||||||||  || ||| ||||||||||    
T  36486780 ttcaataatattttgacttttaaaaa-attaaattcttcacttttcaccattttccaatataatgtttatatttttatc 36486703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 299 - 377
Target Start/End: Original strand, 55120106 - 55120183
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 377  Q
    ||||||||  ||||||||||||||||| | |||||  ||||||||||| ||||| |||||| ||||||  |||||||||    
T  55120106 ttcaacaatgttttgacttttaaaaag-tcaaattcttcatttttcactatttttcaatacaatattttaatttttatc 55120183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 393
Target Start/End: Complemental strand, 19328777 - 19328748
Alignment:
Q  364 tttctatttttatccccttatccaatgccc 393  Q
    ||||||||||||||||||||||||||||||    
T  19328777 tttctatttttatccccttatccaatgccc 19328748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 390
Target Start/End: Original strand, 48513624 - 48513724
Alignment:
Q  289 ttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaa 388  Q
    ||||||||  ||||||||  ||||||||||||||||| | |||| | ||| |||||| |||||| |||||| || ||| ||||||||||  |||| ||||    
T  48513624 ttgcattgaattcaacaatgttttgacttttaaaaag-ttaaatctttcacttttcatcatttttcaatacaatgtttttatttttatcgtcttaaccaa 48513722  T
Q  389 tg 390  Q
    ||    
T  48513723 tg 48513724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 3e-44; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 284 - 395
Target Start/End: Original strand, 6999202 - 6999312
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6999202 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcatttttcaccattttccaatactatatttctatttttatctcctta 6999300  T
Q  384 tccaatgcccca 395  Q
    |||| |||||||    
T  6999301 tccattgcccca 6999312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 285 - 397
Target Start/End: Complemental strand, 765258 - 765147
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||| ||||||||||  |||||||||||||||||||||||||    
T  765258 atgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcacaattttccaatgttatatttctatttttatccccttat 765160  T
Q  385 ccaatgccccaag 397  Q
    |||||||||||||    
T  765159 ccaatgccccaag 765147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 288 - 390
Target Start/End: Original strand, 2966544 - 2966645
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  2966544 tttgcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccattttccaatgttatatttctatttttatccccttatcca 2966642  T
Q  388 atg 390  Q
    |||    
T  2966643 atg 2966645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 284 - 393
Target Start/End: Original strand, 862589 - 862697
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  862589 catgtttgcattggtttcaacaagattttgactcttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttctatttttatcccatta 862687  T
Q  384 tccaatgccc 393  Q
    | ||||||||    
T  862688 ttcaatgccc 862697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 39401643 - 39401532
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||| |||||||||||||| |||||||||||||||||| ||||  |||||| ||||||||||||| ||||  ||||||||||||||||||||||||    
T  39401643 catgtttgtattggtttcaacaaaattttgacttttaaaaagttaaa--ttatcacttttcaccatttttcaatgttatatttctatttttatcccctta 39401546  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  39401545 tccaatgccccaag 39401532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 281 - 397
Target Start/End: Original strand, 16361563 - 16361678
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||||| |||| |||||||||||||  ||||||||||||||||| |||    
T  16361563 taacatgtttgcattggtttcgacaacattttgacttttataaagttaaa-tttatcaatttttaccattttccaatgttatatttctatttttattccc 16361661  T
Q  381 ttatccaatgccccaag 397  Q
    ||||||||||| |||||    
T  16361662 ttatccaatgctccaag 16361678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 17603811 - 17603923
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||| |||||| ||||||||||||||||||||| |||| |||||||||||| | |||||| |||| ||||||||||||||||||| | |||    
T  17603811 catgtttgcattgatttcaataacattttgacttttaaaaagttaaa-tttatcattttttatcatttttcaatgctatatttctatttttatcgcgtta 17603909  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  17603910 tccaatgccccaag 17603923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 33726380 - 33726492
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||| |||| ||||||||| ||||| ||||||| |||| |||| ||||| ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  33726380 catgtttgtattgatttcaacaatattttaacttttagaaagttaaa-tttattatttttcaccatttttcaatactatatttttatttttatcccctta 33726478  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  33726479 tccaatgccccaag 33726492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 39085901 - 39085789
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||| | |||||||||||  |||||||||||||||||||| |||    
T  39085901 catgtttgcattgatttcaacaacattttgacttttaaaaagttaaa-tttatcactttttatcattttccaatgttatatttctatttttatcccttta 39085803  T
Q  384 tccaatgccccaag 397  Q
    ||||||| ||||||    
T  39085802 tccaatgtcccaag 39085789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 41436478 - 41436582
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||||||||||||||||||||||||| | || ||||||| |||||| |||||| ||||||||||||| ||||||||||||||||    
T  41436478 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaagtttatcacttttcatcatttttcaatactatatttttatttttatcccctta 41436576  T
Q  384 tccaat 389  Q
    | ||||    
T  41436577 ttcaat 41436582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 285 - 397
Target Start/End: Original strand, 27495124 - 27495235
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||||||||||||||||||||||||||| |||||||| | |||| ||||||| |||||||||||||| |||  ||||||| |||||||||||||||||    
T  27495124 atgtttgcattggtttcaacaacattttgatttttaaaatgttaaa-tttatcacttttcaccattttctaatgttatatttttatttttatccccttat 27495222  T
Q  385 ccaatgccccaag 397  Q
     ||||||||||||    
T  27495223 tcaatgccccaag 27495235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 281 - 390
Target Start/End: Complemental strand, 17118484 - 17118377
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    |||||| |||||||||||||||||||||||| || |||||||||| |||| |||||||||||||| ||||||||| || ||||||||||||||||||||     
T  17118484 taacatatttgcattggtttcaacaacattt-gagttttaaaaagttaaa-tttatcatttttcaacattttccagtattatatttctatttttatccct 17118387  T
Q  381 ttatccaatg 390  Q
    ||||||||||    
T  17118386 ttatccaatg 17118377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 1321168 - 1321280
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||| ||||| ||||||||||||||||| ||||||| || |||| ||||| |||||| |||||||||||||  ||||||||||||||||||| ||||    
T  1321168 catgtttacattgatttcaacaacattttgatttttaaagagttaaa-tttattattttttaccattttccaatgttatatttctatttttatcctctta 1321266  T
Q  384 tccaatgccccaag 397  Q
    |||||||| |||||    
T  1321267 tccaatgctccaag 1321280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 35445400 - 35445291
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||| |||||||||||||| |||||||||||| ||||  | |||||||||| ||||||||||||| ||||  ||||||| ||||||||||||||||    
T  35445400 catgtttgtattggtttcaacaatattttgacttttgaaaaagttaaatttatcacttttcaccatttttcaatgttatatttatatttttatcccctta 35445301  T
Q  384 tccaatgccc 393  Q
    | ||||||||    
T  35445300 ttcaatgccc 35445291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 281 - 390
Target Start/End: Complemental strand, 9201606 - 9201499
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||| |||| ||||||| |||||||||||||  |||| |||||| ||||||||||| |     
T  9201606 taacatgtttgtattggtt-caacaacattttgacttttaaaaagttaaa-tttatcacttttcaccattttttaatattatattcctatttttatctca 9201509  T
Q  381 ttatccaatg 390  Q
    ||||||||||    
T  9201508 ttatccaatg 9201499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 288 - 393
Target Start/End: Complemental strand, 17095171 - 17095068
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||  |    |||||||||||||||||||| |||||||    
T  17095171 tttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttttcaccatttt-tagagttatatttctatttttatccctttatcca 17095074  T
Q  388 atgccc 393  Q
    ||||||    
T  17095073 atgccc 17095068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 281 - 390
Target Start/End: Original strand, 33864352 - 33864460
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    |||||| ||||||||||||||||||| |||||||||||||||| | | |||||||| | |||||||||||||||||| | |||||| ||||||||||| |    
T  33864352 taacatatttgcattggtttcaacaatattttgacttttaaaatg-ttaaatttattacttttcaccattttccaatgcgatatttttatttttatcctc 33864450  T
Q  381 ttatccaatg 390  Q
    |||| |||||    
T  33864451 ttattcaatg 33864460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 285 - 377
Target Start/End: Original strand, 44173120 - 44173211
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 377  Q
    ||||||| |||||||||||||||||||| | ||||||||| || ||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  44173120 atgtttgtattggtttcaacaacattttaatttttaaaaa-attaaatttatcatttttcatcatttttcaatgctatatttctatttttatc 44173211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 292 - 396
Target Start/End: Complemental strand, 44299782 - 44299679
Alignment:
Q  292 cattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 391  Q
    ||||||||||||||| |||||||||||||||| | |||| ||||||| ||||||||||||| | |  |||||||||||||||||||| |||| |||||||    
T  44299782 cattggtttcaacaatattttgacttttaaaatgttaaa-tttatcacttttcaccatttttcgaggctatatttctatttttatcctcttacccaatgc 44299684  T
Q  392 cccaa 396  Q
    |||||    
T  44299683 cccaa 44299679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 275 - 385
Target Start/End: Complemental strand, 13998022 - 13997913
Alignment:
Q  275 tcttgctaacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt 374  Q
    ||||| || |||||||| |||| ||||||||| ||||| | |||||||||| |||| ||||||||||||||| ||||| |||| ||||||||||||||||    
T  13998022 tcttgttagcatgtttgtattgatttcaacaatattttaatttttaaaaagttaaa-tttatcatttttcacaatttttcaatgctatatttctattttt 13997924  T
Q  375 atccccttatc 385  Q
    || ||||||||    
T  13997923 attcccttatc 13997913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 288 - 393
Target Start/End: Complemental strand, 17056162 - 17056059
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||  | |  ||||||||| |||||||||| |||||||    
T  17056162 tttgcattggtttcaacaacattttgtcttttaaaaag-ttaaatttatcacttttcaccatttt-tagtgttatatttctttttttatccctttatcca 17056065  T
Q  388 atgccc 393  Q
    ||||||    
T  17056064 atgccc 17056059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 288 - 393
Target Start/End: Complemental strand, 17068609 - 17068506
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||  | |  ||||||||| |||||||||| |||||||    
T  17068609 tttgcattggtttcaacaacattttgtcttttaaaaag-ttaaatttatcacttttcaccatttt-tagtgttatatttctttttttatccctttatcca 17068512  T
Q  388 atgccc 393  Q
    ||||||    
T  17068511 atgccc 17068506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 464792 - 464896
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatca-tttttcaccattttccaatactatatttctatttttatccc 379  Q
    ||||||||||| |||| |||||| |||||||| |||||||||||| ||||| |||||| ||||| |||||||| ||||  ||||||||||||||||||||    
T  464792 taacatgtttgtattgatttcaataacattttaacttttaaaaagttaaaa-ttatcatttttttaccatttttcaatgttatatttctatttttatccc 464890  T
Q  380 cttatc 385  Q
     |||||    
T  464891 tttatc 464896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 288 - 393
Target Start/End: Complemental strand, 17074592 - 17074489
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    |||||||| ||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||  | |  |||||||||||||||||||| ||||| |    
T  17074592 tttgcattagtttcaacaacattttgtcttttaaaaag-ttaaatttatcacttttcaccatttt-tagtgttatatttctatttttatccctttatcta 17074495  T
Q  388 atgccc 393  Q
    ||||||    
T  17074494 atgccc 17074489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 281 - 358
Target Start/End: Complemental strand, 23685764 - 23685688
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaata 358  Q
    |||||||||||||||| |||||| ||||||||||||||||||||| | |||||||||| ||||| |||||||||||||    
T  23685764 taacatgtttgcattgatttcaataacattttgacttttaaaaag-ttaaatttatcacttttccccattttccaata 23685688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 11445431 - 11445382
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaa 330  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  11445431 taacatgtttgcattggtttcaacaacattttgacatttaaaaagttaaa 11445382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 284 - 388
Target Start/End: Complemental strand, 34334270 - 34334167
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||| ||||| |||||||| ||||| | || ||||||| | || ||| |||||||| ||||||||| ||||| |||||||||||||||||  ||||    
T  34334270 catgtttgtattggattcaacaatattttaatttgtaaaaagtttaa-tttgtcattttttaccattttcaaatacaatatttctatttttatcatctta 34334172  T
Q  384 tccaa 388  Q
    |||||    
T  34334171 tccaa 34334167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 288 - 390
Target Start/End: Original strand, 2239586 - 2239687
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    |||| ||||| |||||||| ||||| |||||||||||| | ||||| ||||||||| |||||||| || | | |||||||||| ||||||| |||| |||    
T  2239586 tttgtattggattcaacaatattttaacttttaaaaag-ttaaattcatcattttttaccatttttcattgcaatatttctatctttatcctcttaacca 2239684  T
Q  388 atg 390  Q
    |||    
T  2239685 atg 2239687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 43140419 - 43140328
Alignment:
Q  297 gtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaat 389  Q
    ||||||| || ||||| | |||||||||| |||| |||||||||||||  |||||| ||||  ||||||| ||||||||||| ||||||||||    
T  43140419 gtttcaataatatttttaattttaaaaagttaaa-tttatcatttttcgtcatttttcaatgttatatttttatttttatcctcttatccaat 43140328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 284 - 345
Target Start/End: Original strand, 15004927 - 15004987
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttca 345  Q
    |||||||| |||||||||||||||||||| | |||||||||| | |||||||||| ||||||    
T  15004927 catgtttgtattggtttcaacaacattttaatttttaaaaag-ttaaatttatcacttttca 15004987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 372
Target Start/End: Complemental strand, 11445356 - 11445313
Alignment:
Q  329 aaatttatcatttttcaccattttccaatactatatttctattt 372  Q
    |||||||||||||||||||||||| ||||  |||||||||||||    
T  11445356 aaatttatcatttttcaccatttttcaatgttatatttctattt 11445313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 34220740 - 34220650
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatg 390  Q
    |||||||| ||||| |||||||||||  |||| || |||| ||||||||| || ||||| | | |||||||||||||||| |||| ||||||    
T  34220740 ttcaacaatattttaacttttaaaaacttaaa-ttcatcacttttcaccacttcccaatgcaagatttctatttttatcctcttaaccaatg 34220650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 2805382 - 2805488
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaaga-taaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||| ||| | |||||||| ||||||||||||||||| | | ||||| |||| |||| |  ||||| |||||| ||| || ||||||||||| ||||    
T  2805382 atgtttgtattagattcaacaatattttgacttttaaaaaaagttaaattcatcacttttaattatttttcaatacaatacttatatttttatcctctta 2805481  T
Q  384 tccaatg 390  Q
     ||||||    
T  2805482 accaatg 2805488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 299 - 397
Target Start/End: Original strand, 11659277 - 11659374
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    |||||||| ||||| | |||||||||| |||| | | ||| ||||||| ||||| |||||| |||||| ||||||||||| |||| | ||||| |||||    
T  11659277 ttcaacaatattttaatttttaaaaagttaaattct-tcacttttcactatttttcaatacaatatttttatttttatcctcttaacgaatgctccaag 11659374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 12695286 - 12695233
Alignment:
Q  344 caccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    |||||||||||||||| || ||||||||||||||  |||| ||||||| |||||    
T  12695286 caccattttccaatacaatgtttctatttttatcatcttaaccaatgctccaag 12695233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 4e-43; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 43567615 - 43567503
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||| ||||||||||||| |||||    
T  43567615 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatactataattctatttttatctcctta 43567517  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  43567516 tccaatgccccaag 43567503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 29034687 - 29034799
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  29034687 catgtttgcattagtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatactatatttatatttttatcccctta 29034785  T
Q  384 tccaatgccccaag 397  Q
    ||||||||| ||||    
T  29034786 tccaatgcctcaag 29034799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 5240441 - 5240329
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||    
T  5240441 catgtttgcattggtttcaataacattttgacttttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttctatttttatcccttta 5240343  T
Q  384 tccaatgccccaag 397  Q
    ||||||||| ||||    
T  5240342 tccaatgcctcaag 5240329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 288 - 397
Target Start/End: Original strand, 40763253 - 40763361
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    ||||||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  40763253 tttgcattggtttcaacaacattttaacttttaaaaagttaaa-tttatcacttttcaccatttttcaatgttatatttctatttttatccccttatcca 40763351  T
Q  388 atgccccaag 397  Q
    ||||||||||    
T  40763352 atgccccaag 40763361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 281 - 390
Target Start/End: Original strand, 42222218 - 42222326
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  42222218 taacatgtttgtattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaataccatatttctatttttatcccc 42222316  T
Q  381 ttatccaatg 390  Q
    ||||| ||||    
T  42222317 ttatctaatg 42222326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 285 - 397
Target Start/End: Original strand, 8380442 - 8380553
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| ||||||| |||||| ||||||||||| |||||||| |||||||||||||||||    
T  8380442 atgttttcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcatcattttccaatgctatatttttatttttatccccttat 8380540  T
Q  385 ccaatgccccaag 397  Q
    ||||| |||||||    
T  8380541 ccaataccccaag 8380553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 281 - 390
Target Start/End: Complemental strand, 43958195 - 43958087
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||||||||||||||  || ||||||||||||||||| || |||||||||||||||||| |||||| ||||||||||||||||||||||| ||    
T  43958195 taacatgtttgcattggtttcagtaatattttgacttttaaaaa-attaaatttatcatttttcacaattttctaatactatatttctatttttatcgcc 43958097  T
Q  381 ttatccaatg 390  Q
    ||||||||||    
T  43958096 ttatccaatg 43958087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 8292745 - 8292856
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||| |||| ||||||||||||||||||||||||||||  ||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  8292745 catgtttggattgatttcaacaacattttgacttttaaaaaggcaaa-tttataacttttcaccattttccaatgctatatttctatttttatcccctta 8292843  T
Q  384 tccaatgccccaa 396  Q
    |||||||| ||||    
T  8292844 tccaatgctccaa 8292856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 285 - 393
Target Start/End: Complemental strand, 27053601 - 27053494
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||||||||||  || ||||||||||||||||||||| ||||    
T  27053601 atgtttgcattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcaccattttctgatgctatatttctatttttatccctttat 27053503  T
Q  385 ccaatgccc 393  Q
    |||||||||    
T  27053502 ccaatgccc 27053494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 7323062 - 7322958
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| |||   ||||||||||||||||||| ||||    
T  7323062 catgtttgcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccatttttcaaggttatatttctatttttatcctctta 7322964  T
Q  384 tccaat 389  Q
    ||||||    
T  7322963 tccaat 7322958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 284 - 393
Target Start/End: Original strand, 22521586 - 22521694
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| || ||| ||||||||||| ||||||||||| |||||||| ||||    
T  22521586 catgtttgcattggtttcaacaacattttgacttttaagaagttaaa-tttatcacttctcatcattttccaatgctatatttctagttttatcctctta 22521684  T
Q  384 tccaatgccc 393  Q
    ||||||||||    
T  22521685 tccaatgccc 22521694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 24359817 - 24359713
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||| ||||||  |||| ||||||||||| | |||||||||||||||||||||||||    
T  24359817 catgtttgcattggtttcaacaacattttaacttttaaaaagttaaa-tttatccctttttaccattttccattgctatatttctatttttatcccctta 24359719  T
Q  384 tccaat 389  Q
    ||||||    
T  24359718 tccaat 24359713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 22707049 - 22707159
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||  |||||||||| |||||||||||||||||| || |||    
T  22707049 catgtttgcattggtttcaacaacatgttaacttttaaaaag-taaaatttatcatttttcattattttccaatgctatatttctatttttat-ccttta 22707146  T
Q  384 tccaatgccccaa 396  Q
    | |||||||||||    
T  22707147 ttcaatgccccaa 22707159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 281 - 396
Target Start/End: Original strand, 49069552 - 49069666
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||| |||||||||||||| || |||| |||||||||| || | ||||||| ||||||||||||| ||||||||||||||||||||||||  |    
T  49069552 taacatgtttgtattggtttcaacaatatattgatttttaaaaagttaga-tttatcacttttcaccatttttcaatactatatttctatttttatcttc 49069650  T
Q  381 ttatccaatgccccaa 396  Q
    ||||||||||||||||    
T  49069651 ttatccaatgccccaa 49069666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 281 - 397
Target Start/End: Complemental strand, 30538589 - 30538477
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    |||||||||||||||| ||||||||   |||||| |||||||||| |||| ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  30538589 taacatgtttgcattgatttcaaca---ttttgatttttaaaaagttaaa-tttatcatttttcactattttctaatactatatttctatttttatcccc 30538494  T
Q  381 ttatccaatgccccaag 397  Q
    ||||| |||| ||||||    
T  30538493 ttatctaatgtcccaag 30538477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 41188894 - 41188785
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||| |||||||  ||||||||||||||||| |||||||| ||||||||||| |||||    
T  41188894 atgtttgcattgatttcaacagcattttgacttttaaaaagttaaa-tttatcacctttcaccattttccaatgctatatttatatttttatcctcttat 41188796  T
Q  385 ccaatgcccca 395  Q
    | |||||||||    
T  41188795 caaatgcccca 41188785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 288 - 396
Target Start/End: Complemental strand, 40067021 - 40066915
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    |||| |||||||| ||||||||||| | |||||||||| |||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  40067021 tttgtattggttttaacaacatttt-atttttaaaaagttaaa-tttatcatttttcaccatttttcaatattatatttctatttttatccccttatcca 40066924  T
Q  388 atgccccaa 396  Q
    |||| ||||    
T  40066923 atgcaccaa 40066915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 289 - 388
Target Start/End: Original strand, 3681699 - 3681797
Alignment:
Q  289 ttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaa 388  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||||| ||||||||||||||||||  | ||||| |||||||||||||||||||||    
T  3681699 ttgcattggtttcaacaacattttaacttttaaaaagttaaa-tttatcacttttcaccattttccaatgttgtatttttatttttatccccttatccaa 3681797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 284 - 393
Target Start/End: Original strand, 1910244 - 1910351
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||| |||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  1910244 catgtttacatttgtttcaacaacattttaacttttaaaaagttaaa-tttatcatttttcaccattttctaatgttatatttctatttttat-ccctta 1910341  T
Q  384 tccaatgccc 393  Q
    || |||||||    
T  1910342 tcaaatgccc 1910351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 48454907 - 48454819
Alignment:
Q  308 attttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    |||||||||||||||||| |||| ||||||| |||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  48454907 attttgacttttaaaaagttaaa-tttatcacttttcaccatttcccaatgttatatttctatttttatccccttatccaatgccccaag 48454819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 284 - 379
Target Start/End: Original strand, 40194826 - 40194920
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccc 379  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||| || |||  |||||||||||| ||||||||||||    
T  40194826 catgtttgcattggtttcaacaacattttgacttttaaaaa-attaaatttatcacttttcatcaatttataatactatatttatatttttatccc 40194920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 304 - 397
Target Start/End: Original strand, 36279139 - 36279231
Alignment:
Q  304 caacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    ||||||||||| |||||||||| |||| ||||||| |||||||||||||||||| |||||||| |||||||||||  |||||||||||||||||    
T  36279139 caacattttgatttttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttatatttttatcctattatccaatgccccaag 36279231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 281 - 390
Target Start/End: Complemental strand, 46478667 - 46478560
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    |||||| |||||||| |||||||||| ||||| |||||||||||| |||| ||||||||||| ||| ||||| ||||  |||||||||||||||||||||    
T  46478667 taacatatttgcattagtttcaacaatattttaacttttaaaaagttaaa-tttatcatttt-cactatttttcaatgatatatttctatttttatcccc 46478570  T
Q  381 ttatccaatg 390  Q
    ||||||||||    
T  46478569 ttatccaatg 46478560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 285 - 397
Target Start/End: Complemental strand, 8258746 - 8258640
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||||||||||||||||||| ||| ||||| |||||||| | |||||||||| ||||||||||||| ||     ||||||||||||||||||||||||    
T  8258746 atgtttgcattggtttcaacaaaattatgactattaaaaag-ttaaatttatcacttttcaccatttttca-----atatttctatttttatccccttat 8258653  T
Q  385 ccaatgccccaag 397  Q
    || ||||||||||    
T  8258652 ccgatgccccaag 8258640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 5348078 - 5347973
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||   ||||||||||||||||| |||| ||||||| |||||| |||||||||||  ||||||||||||| ||| ||||||    
T  5348078 catgtttgcattggtttcaaca---ttttgacttttaaaaagttaaa-tttatcacttttcatcattttccaatgttatatttctatttatattccctta 5347983  T
Q  384 tccaatgccc 393  Q
    | ||||||||    
T  5347982 ttcaatgccc 5347973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 285 - 376
Target Start/End: Original strand, 46042749 - 46042838
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttat 376  Q
    ||||||||||||||||||||||||||| |||||| |||||| | |||||||| | ||||||||||||| |||||||||||||||||||||||    
T  46042749 atgtttgcattggtttcaacaacatttagactttaaaaaag-ttaaatttataacttttcaccatttt-caatactatatttctatttttat 46042838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 287 - 384
Target Start/End: Complemental strand, 31626147 - 31626051
Alignment:
Q  287 gtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||||||||||||||||||||||||| |||||||||| | |||||||||| |||||| ||||||  |||| ||||||| |||||||||| ||||||    
T  31626147 gtttgcattggtttcaacaacattttgatttttaaaaag-ttaaatttatcacttttcatcattttttaatattatatttttatttttatctccttat 31626051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 288 - 374
Target Start/End: Original strand, 42291284 - 42291371
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcacca-ttttccaatactatatttctattttt 374  Q
    |||||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||||| | ||||||||||| ||||||||||||||    
T  42291284 tttgcattggattcaacaatattttaacttttaaaaaaataaaatttattatttttcactatttttccaatacaatatttctattttt 42291371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 29687476 - 29687547
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaa 356  Q
    ||||||||||||||||||||||||||||| |||||||||||| | ||||| |||| |||||||||||||||||    
T  29687476 catgtttgcattggtttcaacaacattttaacttttaaaaag-ttaaattcatcacttttcaccattttccaa 29687547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 285 - 390
Target Start/End: Complemental strand, 1907697 - 1907593
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    ||||||||||||  |||||||| ||||||| | ||||||| || ||||| || |||||| |||||||| |||||| |||||||| |||||||||  ||||    
T  1907697 atgtttgcattgcattcaacaatattttgattattaaaaa-attaaattcattattttttaccatttttcaatacaatatttctctttttatccttttat 1907599  T
Q  385 ccaatg 390  Q
    ||||||    
T  1907598 ccaatg 1907593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 293 - 361
Target Start/End: Complemental strand, 30388760 - 30388693
Alignment:
Q  293 attggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatacta 361  Q
    |||| |||||| || |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||    
T  30388760 attgatttcaataatattttgacttttaaaaagttaaa-tttatcatttttcaccatttttcaatacta 30388693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 690 - 770
Target Start/End: Original strand, 39807975 - 39808055
Alignment:
Q  690 cagcatgtcttcaaaatggagcaagaggaatatacaaaggaagagattgattggagttatatcgagtttgttgataatcaa 770  Q
    |||||||| ||||||||||||||||| ||||| | ||| ||||| |||||||||||||| || || ||||| |||||||||    
T  39807975 cagcatgttttcaaaatggagcaagaagaatacaaaaaagaagaaattgattggagttacattgaatttgtggataatcaa 39808055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 329 - 377
Target Start/End: Complemental strand, 31360357 - 31360309
Alignment:
Q  329 aaatttatcatttttcaccattttccaatactatatttctatttttatc 377  Q
    |||||||||| |||| ||||||| ||||||| |||||||||||||||||    
T  31360357 aaatttatcactttttaccatttcccaatacaatatttctatttttatc 31360309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 287 - 357
Target Start/End: Original strand, 6548533 - 6548602
Alignment:
Q  287 gtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaat 357  Q
    ||||||||||| | |||||| ||||| |||||||||||| | ||||| ||||||||||||| ||| |||||    
T  6548533 gtttgcattggatccaacaatattttaacttttaaaaag-ttaaattcatcatttttcaccgtttcccaat 6548602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 285 - 314
Target Start/End: Original strand, 29959068 - 29959097
Alignment:
Q  285 atgtttgcattggtttcaacaacattttga 314  Q
    ||||||||||||||||||||||||||||||    
T  29959068 atgtttgcattggtttcaacaacattttga 29959097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 288 - 373
Target Start/End: Original strand, 32204186 - 32204270
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttt 373  Q
    |||||||||  ||||| || ||||| |||||||||||| |||| || |||| |||||| |||||| |||| | |||||||||||||    
T  32204186 tttgcattgtattcaaaaatattttaacttttaaaaagttaaa-ttcatcacttttcatcatttttcaatgcaatatttctatttt 32204270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 374
Target Start/End: Complemental strand, 37869429 - 37869384
Alignment:
Q  329 aaatttatcatttttcaccattttccaatactatatttctattttt 374  Q
    |||| |||||||||||| ||||||||||||| |||||| |||||||    
T  37869429 aaatatatcatttttcatcattttccaatacaatatttttattttt 37869384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 285 - 377
Target Start/End: Complemental strand, 42552579 - 42552489
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 377  Q
    ||||||||||||  || ||||| |||||||||||||||||| |  |||| || |||||| || ||||| ||| || |||||| ||||||||||    
T  42552579 atgtttgcattgaatttaacaatattttgacttttaaaaagtt--aattcattattttttactatttttcaacacaatatttttatttttatc 42552489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 4e-40; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 284 - 392
Target Start/End: Complemental strand, 36730262 - 36730155
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||    
T  36730262 catgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttatatttttatcccctta 36730164  T
Q  384 tccaatgcc 392  Q
    |||||||||    
T  36730163 tccaatgcc 36730155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 281 - 396
Target Start/End: Complemental strand, 4759962 - 4759848
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| |||| |||||||||||||||||||||     
T  4759962 taacatgtttgcattggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcaccatttttcaatgctatatttctatttttatccct 4759864  T
Q  381 ttatccaatgccccaa 396  Q
    ||||||||||| ||||    
T  4759863 ttatccaatgctccaa 4759848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 8715610 - 8715503
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||||||| |||||||    
T  8715610 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttttcaccattttccaatgctatatttctattttta-cccctta 8715513  T
Q  384 tccaatgccc 393  Q
    ||||||||||    
T  8715512 tccaatgccc 8715503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 9067497 - 9067390
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||||||| |||||||    
T  9067497 catgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttttcaccattttccaatgctatatttctattttta-cccctta 9067400  T
Q  384 tccaatgccc 393  Q
    ||||||||||    
T  9067399 tccaatgccc 9067390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 285 - 397
Target Start/End: Complemental strand, 29915683 - 29915572
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||||||||||||||||| |||||||||||||||||||| |||| ||||| |||||| |||||||||||||||||||||| |||||||||||||||||    
T  29915683 atgtttgcattggtttcaaccacattttgacttttaaaaagttaaa-tttataattttttaccattttccaatactatatttttatttttatccccttat 29915585  T
Q  385 ccaatgccccaag 397  Q
    |||| ||||||||    
T  29915584 ccaacgccccaag 29915572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 285 - 397
Target Start/End: Complemental strand, 29964836 - 29964725
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||||||||||||||||| |||||||||||||||||||| |||| ||||| |||||| |||||||||||||||||||||| |||||||||||||||||    
T  29964836 atgtttgcattggtttcaaccacattttgacttttaaaaagttaaa-tttataattttttaccattttccaatactatatttttatttttatccccttat 29964738  T
Q  385 ccaatgccccaag 397  Q
    |||| ||||||||    
T  29964737 ccaacgccccaag 29964725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 281 - 390
Target Start/End: Original strand, 46317483 - 46317591
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||  ||||||||||||||||||  |    
T  46317483 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcatttttcatcattttccaatgttatatttctatttttatctac 46317581  T
Q  381 ttatccaatg 390  Q
    ||||||||||    
T  46317582 ttatccaatg 46317591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 281 - 397
Target Start/End: Original strand, 32415566 - 32415681
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| | ||||||| ||||| |||| |||||||||||||||||||||     
T  32415566 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatgacttttcacaatttttcaatgctatatttctatttttatccct 32415664  T
Q  381 ttatccaatgccccaag 397  Q
    |||||||||||| ||||    
T  32415665 ttatccaatgcctcaag 32415681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 281 - 396
Target Start/End: Complemental strand, 44695783 - 44695669
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    |||||||||||||||| ||||||||||||||| | |||||||||| |||| ||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  44695783 taacatgtttgcattgatttcaacaacattttaatttttaaaaagttaaa-tttatcatttttcaccattttccaagattatatttatatttttatcccc 44695685  T
Q  381 ttatccaatgccccaa 396  Q
    |||||||||| |||||    
T  44695684 ttatccaatgtcccaa 44695669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 281 - 396
Target Start/End: Original strand, 37509108 - 37509222
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| |||||||||| ||  ||||| ||||||||||||    
T  37509108 taacatatttgcattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcactattttccaatgctgcatttcaatttttatcccc 37509206  T
Q  381 ttatccaatgccccaa 396  Q
    ||||||||||||||||    
T  37509207 ttatccaatgccccaa 37509222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 284 - 385
Target Start/End: Complemental strand, 12905391 - 12905292
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  12905391 catgtttgcattggtttcaacaacattttgacttttaaaatg-ttaaatttatcatttttcaccatttt-caatgttatatttctatttttatcccctta 12905294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 44570495 - 44570383
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| || |||| ||||||||||||||||||  |||||||||||||| ||||| |||    
T  44570495 catgtttgcattgatttcaacaacattttgacttttaaaaagttaaagtt-atcacttttcaccattttccaatgttatatttctattttgatcccttta 44570397  T
Q  384 tccaatgccccaag 397  Q
    || |||||||||||    
T  44570396 tcgaatgccccaag 44570383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 10854859 - 10854975
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt----atccc 379  Q
    ||||||||||||||||||||||||||||| |||||||||||| | |||||||| | |||||||||||||||||| ||||||||||| ||||    |||||    
T  10854859 catgtttgcattggtttcaacaacattttaacttttaaaaag-ttaaatttattagttttcaccattttccaatgctatatttctacttttatccatccc 10854957  T
Q  380 cttatccaatgccccaag 397  Q
    ||||||||||||||||||    
T  10854958 cttatccaatgccccaag 10854975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 285 - 375
Target Start/End: Original strand, 52570783 - 52570872
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttta 375  Q
    |||||||||||||||||||||| |||||||||||||||||| || | ||||||| ||||||||||||||||||||||||||||||||||||    
T  52570783 atgtttgcattggtttcaacaatattttgacttttaaaaagttata-tttatcacttttcaccattttccaatactatatttctattttta 52570872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 35306332 - 35306436
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||| |||||| |||||||| |||||||||||| |||| ||||||| |||||| |||||||||||  ||||||||||||||||||||||||    
T  35306332 catgtttgcattgatttcaataacattttaacttttaaaaagttaaa-tttatcacttttcatcattttccaatgttatatttctatttttatcccctta 35306430  T
Q  384 tccaat 389  Q
    ||||||    
T  35306431 tccaat 35306436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 51817421 - 51817313
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||| ||| |||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||||||| |||||||| ||||||||||| ||||    
T  51817421 catgtttgtattagtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttttatttttatcctctta 51817323  T
Q  384 tccaatgccc 393  Q
    | ||||||||    
T  51817322 ttcaatgccc 51817313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 8847561 - 8847449
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||| ||||| ||||||||| ||||| |||||||||||| |||| || |||| |||| |||||||||||||  ||||||||||||||||||||||||    
T  8847561 catgtttacattgttttcaacaatattttaacttttaaaaagttaaa-ttaatcactttttaccattttccaatgttatatttctatttttatcccctta 8847463  T
Q  384 tccaatgccccaag 397  Q
    ||||||| ||||||    
T  8847462 tccaatgtcccaag 8847449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 12051038 - 12051142
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||| ||||||||||||||| | |||||||||| |||| ||||||||||||||  ||||| |||||||||||||||||||||||  |||||    
T  12051038 catgtttgcattgttttcaacaacattttaatttttaaaaagttaaa-tttatcatttttcattattttacaatactatatttctatttttatttcctta 12051136  T
Q  384 tccaat 389  Q
    ||||||    
T  12051137 tccaat 12051142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 288 - 397
Target Start/End: Complemental strand, 25102426 - 25102319
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    ||||||||||||||||||| ||||| ||||| |||||  |||  ||||||| |||| ||||||||||||| ||||||||||||||||||| | |||||||    
T  25102426 tttgcattggtttcaacaatattttaactttaaaaaaattaa--tttatcactttttaccattttccaatgctatatttctatttttatctcattatcca 25102329  T
Q  388 atgccccaag 397  Q
    ||| ||||||    
T  25102328 atgtcccaag 25102319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 1803932 - 1804000
Alignment:
Q  329 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    ||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  1803932 aaatttatcattttttaccctttttcaataatatatttctatttttatccccttatccaatgccccaag 1804000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 285 - 397
Target Start/End: Complemental strand, 45899652 - 45899540
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatca-tttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||| |||||  |||||||| |||||||||||||||||  |||| || |||| ||||||| ||||||||||||  |||||||||||||||| | ||||    
T  45899652 atgtttacattgaattcaacaatattttgacttttaaaaatttaaa-ttcatcactttttcatcattttccaatataatatttctatttttattctctta 45899554  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  45899553 tccaatgccccaag 45899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 281 - 369
Target Start/End: Complemental strand, 20227492 - 20227405
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttcta 369  Q
    ||||||||||| ||||||||||| |||||||| |||||||| ||| | |||||||||| |||||| |||||| |||| |||||||||||    
T  20227492 taacatgtttgtattggtttcaataacattttaacttttaagaag-ttaaatttatcacttttcatcatttttcaatgctatatttcta 20227405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 292 - 393
Target Start/End: Complemental strand, 18888 - 18788
Alignment:
Q  292 cattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 391  Q
    |||||| |||||||| ||||| | |||||||||| |||| || |||| |||||||| ||| ||||| | |||||||||||||||||| |||| |||||||    
T  18888 cattggattcaacaatattttaatttttaaaaagttaaa-ttcatcacttttcaccgtttcccaatgcaatatttctatttttatcctcttaaccaatgc 18790  T
Q  392 cc 393  Q
    ||    
T  18789 cc 18788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 345
Target Start/End: Original strand, 31647304 - 31647364
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttca 345  Q
    ||||||||||||| |||||| ||||||||||||||||||||| | |||||||||||||||||    
T  31647304 catgtttgcattgatttcaataacattttgacttttaaaaag-ttaaatttatcatttttca 31647364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 286 - 374
Target Start/End: Complemental strand, 34060873 - 34060786
Alignment:
Q  286 tgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt 374  Q
    |||||||||||  |||||||| ||||| |||||||||||| |||| || |||| ||||||||||||| |||||| |||||| |||||||    
T  34060873 tgtttgcattgaattcaacaatattttaacttttaaaaagttaaa-ttcatcacttttcaccatttttcaatacaatatttttattttt 34060786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 357 - 397
Target Start/End: Original strand, 41346346 - 41346386
Alignment:
Q  357 tactatatttctatttttatccccttatccaatgccccaag 397  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41346346 tactatatttctatttttatccccttatccaatgccccaag 41346386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 341 - 397
Target Start/End: Complemental strand, 48136776 - 48136720
Alignment:
Q  341 tttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||| |||||||    
T  48136776 tttcacaattttccaatgctatatttctatttttattcccttatccaataccccaag 48136720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 41345977 - 41346050
Alignment:
Q  286 tgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatact 360  Q
    ||||||||||||||||||||| ||||| ||||||||||| || |||||||| | ||||||| ||||| |||||||    
T  41345977 tgtttgcattggtttcaacaatattttaacttttaaaaa-attaaatttattacttttcactatttttcaatact 41346050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 291 - 379
Target Start/End: Original strand, 11675320 - 11675405
Alignment:
Q  291 gcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccc 379  Q
    ||||||| |||||||| |||||||| ||||||||| |||| ||  |||||||  |||||||| |||||| |||||||||||||||||||    
T  11675320 gcattggattcaacaatattttgacatttaaaaagttaaa-ttcgtcatttt--accatttttcaatacaatatttctatttttatccc 11675405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 529 - 592
Target Start/End: Original strand, 2022788 - 2022851
Alignment:
Q  529 aagagaaaaatttggattcaaggtctttttcatgtttattttgcaagagaaaatttgctacttc 592  Q
    ||||||| ||||  ||||||| ||||||||||||||  |||||||||||||||||| |||||||    
T  2022788 aagagaagaattcagattcaaagtctttttcatgttgtttttgcaagagaaaattttctacttc 2022851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 312 - 383
Target Start/End: Original strand, 39436493 - 39436563
Alignment:
Q  312 tgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||| |||| | | | ||||||||||||||| |||||| |||||||||||||||||| ||||    
T  39436493 tgacttttaaaaagttaaattcttt-atttttcaccatttttcaatacaatatttctatttttatcctctta 39436563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 595
Target Start/End: Complemental strand, 3157034 - 3156968
Alignment:
Q  529 aagagaaaaatttggattcaaggtctttttcatgtttattttgcaagagaaaatttgctacttcaca 595  Q
    ||||||| |||| ||||||||||||||||||||| |  ||||| |||||| ||||| ||||||||||    
T  3157034 aagagaagaattcggattcaaggtctttttcatgctccttttgtaagagacaattttctacttcaca 3156968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 292 - 376
Target Start/End: Complemental strand, 19029 - 18946
Alignment:
Q  292 cattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttat 376  Q
    |||||| |||||||| ||||| | |||||||||| |||| || |||| |||||||| ||| ||||| | ||||||||||||||||    
T  19029 cattggattcaacaatattttaatttttaaaaagttaaa-ttcatcacttttcaccgtttcccaatgcaatatttctatttttat 18946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 543 - 595
Target Start/End: Original strand, 3167250 - 3167302
Alignment:
Q  543 gattcaaggtctttttcatgtttattttgcaagagaaaatttgctacttcaca 595  Q
    ||||||| ||||||||||||||  |||||||||||||||||| |||| |||||    
T  3167250 gattcaaagtctttttcatgttgtttttgcaagagaaaattttctacatcaca 3167302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 302 - 378
Target Start/End: Complemental strand, 49976232 - 49976157
Alignment:
Q  302 aacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcc 378  Q
    ||||| |||||||||||||||||| |||| || |||| |||||||||||   |||||| ||| ||||||||||||||    
T  49976232 aacaatattttgacttttaaaaagttaaa-ttcatcacttttcaccattagtcaatacaataattctatttttatcc 49976157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 288 - 367
Target Start/End: Original strand, 11316970 - 11317048
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttc 367  Q
    |||||||| | ||||| || |||||||||||||||||| | ||||| || | ||||||||||||||||| || |||||||    
T  11316970 tttgcattagattcaataatattttgacttttaaaaag-ttaaattcataacttttcaccattttccaaaacaatatttc 11317048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 396
Target Start/End: Complemental strand, 12060153 - 12060057
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaa 396  Q
    ||||||||  |||| |||||||||||  | |||| ||||| |||||| ||||||||||||| |||||||||  ||| ||| |||| ||||| ||||||    
T  12060153 ttcaacaattttttaacttttaaaaac-tcaaatctatcacttttcatcattttccaatacaatatttctaaatttgtcctcttaaccaataccccaa 12060057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 342 - 407
Target Start/End: Complemental strand, 44019172 - 44019107
Alignment:
Q  342 ttcaccattttccaatactatatttctatttttatccccttatccaatgccccaagcattcacctt 407  Q
    |||||||||||  |||  ||||||| ||||||||||||||||| |||||| ||||| |||| ||||    
T  44019172 ttcaccattttttaatgatatatttatatttttatccccttattcaatgctccaaggattctcctt 44019107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 396
Target Start/End: Complemental strand, 48313932 - 48313836
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaa 396  Q
    ||||||||  |||||| |||||||||| | |||||| ||  |||||||||||| ||||||| || |||||||||||||   ||||  |||||||||||    
T  48313932 ttcaacaatgttttgatttttaaaaag-tcaaatttttcgcttttcaccatttcccaatacaatgtttctatttttatgatcttaatcaatgccccaa 48313836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 3e-38; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 19389419 - 19389307
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||| ||||||| | |||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  19389419 catgtttgcattgttttcaacgatattttgacttttaaaaagttaaa-tttatcacttttcacaattttccaatactatatttctatttttatcccctta 19389321  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  19389320 tccaatgccccaag 19389307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 21016234 - 21016345
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| | ||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  21016234 catgtttgcattggcttcaacaacattttgacttttaaaaagttaaa-tctatcacttttcaccatttttcaatattatatttctatttttatcccctta 21016332  T
Q  384 tccaatgccccaa 396  Q
    ||||| |||||||    
T  21016333 tccaaagccccaa 21016345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 25249450 - 25249345
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||||||| |||||||| |||||||| |||||||    
T  25249450 catgtttgcattggtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttttatttttaccccctta 25249352  T
Q  384 tccaatg 390  Q
    |||||||    
T  25249351 tccaatg 25249345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 285 - 385
Target Start/End: Original strand, 18068963 - 18069062
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    ||||||||||| ||||||||||||||||||| ||||||||| |||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  18068963 atgtttgcattagtttcaacaacattttgacctttaaaaagttaaa-tttatcacttttcaccattttccaatgctatatttctatttttatccccttat 18069061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 285 - 393
Target Start/End: Original strand, 45338005 - 45338112
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||||||||||| |||| |||||||||| |||||||||| |||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  45338005 atgtttgcattggtctcaataacattttgatttttaaaaagttaaa-tttatcatttttcaccatttttcaatgttatatttctatttttatccccttat 45338103  T
Q  385 ccaatgccc 393  Q
    |||||||||    
T  45338104 ccaatgccc 45338112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 281 - 395
Target Start/End: Original strand, 6939155 - 6939268
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| || |||||||||| ||||  |||||||||||||||||| |     
T  6939155 taacatgtttgcattggtttcaacaacattttgacttttaaaaag-ttaaatttatcacttgtcaccatttttcaatgttatatttctatttttatctca 6939253  T
Q  381 ttatccaatgcccca 395  Q
    |||| ||||||||||    
T  6939254 ttattcaatgcccca 6939268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 288 - 390
Target Start/End: Original strand, 8018765 - 8018866
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    |||||||| |||| ||||||||||||| |||||||||| |||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8018765 tttgcattagttttaacaacattttgatttttaaaaagttaaa-tttatcacttttcaccattttccaatattatatttctatttttatccccttatcca 8018863  T
Q  388 atg 390  Q
    |||    
T  8018864 atg 8018866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 284 - 391
Target Start/End: Original strand, 4989936 - 4990039
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||   ||||||| ||||||||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  4989936 catgtttgcattggtttcaaca---ttttgacatttaaaaagttaaa-tttatcatttttcactattttccaatgctatatttctatttttatcccctta 4990031  T
Q  384 tccaatgc 391  Q
    ||||||||    
T  4990032 tccaatgc 4990039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 284 - 388
Target Start/End: Complemental strand, 21016166 - 21016063
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||||| ||||||||||||||||||||||||||| | |||| ||||| |||| |||||||| ||||  ||||||||||||||||||||||||    
T  21016166 catgtttgcattggcttcaacaacattttgacttttaaaaag-ttaaatctatcacttttaaccatttttcaatgttatatttctatttttatcccctta 21016068  T
Q  384 tccaa 388  Q
    |||||    
T  21016067 tccaa 21016063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 284 - 384
Target Start/End: Complemental strand, 26195482 - 26195383
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||| |||||||||||||||||||| |||||||||||| |||| ||||||| ||||||| ||||||||||  ||||||||||||||||||||||||    
T  26195482 catgtttgtattggtttcaacaacattttaacttttaaaaagttaaa-tttatcacttttcacaattttccaatgttatatttctatttttatcccctta 26195384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 26672799 - 26672894
Alignment:
Q  293 attggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaat 389  Q
    |||||||||||||||||||||||||||||||| || ||||||||| ||||| | ||||||||||| ||||||||||||||||||||| |||||||||    
T  26672799 attggtttcaacaacattttgacttttaaaaa-attaaatttatccttttttatcattttccaatgctatatttctatttttatccctttatccaat 26672894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 288 - 389
Target Start/End: Original strand, 10694811 - 10694911
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcca 387  Q
    ||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||| ||||||||  |||||||||||| |||||| |||||||||||||    
T  10694811 tttgcattgatttcaacaacattttgacttttaaaaagttaaa-tttatcactttttaccatttttaaatactatatttttattttaatccccttatcca 10694909  T
Q  388 at 389  Q
    ||    
T  10694910 at 10694911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 284 - 393
Target Start/End: Original strand, 3174456 - 3174568
Alignment:
Q  284 catgtttgcattggtttcaacaacattt----tgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccc 379  Q
    |||||||| |||||||||||||||||||    |||||||||||||| | |||||||| |||||||||||||||||||||  |||||||||||||||||||    
T  3174456 catgtttgtattggtttcaacaacatttattttgacttttaaaaag-tcaaatttataatttttcaccattttccaatataatatttctatttttatccc 3174554  T
Q  380 cttatccaatgccc 393  Q
    || |||||| ||||    
T  3174555 ctcatccaacgccc 3174568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 284 - 389
Target Start/End: Complemental strand, 34714030 - 34713924
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatac--tatatttctatttttatcccct 381  Q
    |||||||||||||||||||||||||||||||||||||| ||| | |||||||||| ||| ||||||||| ||||||  ||||| ||||||||||||||||    
T  34714030 catgtttgcattggtttcaacaacattttgacttttaagaag-tgaaatttatcactttgcaccatttttcaatactatatatatctatttttatcccct 34713932  T
Q  382 tatccaat 389  Q
    ||| ||||    
T  34713931 tattcaat 34713924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 284 - 384
Target Start/End: Complemental strand, 14855493 - 14855394
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||| |||| ||||||||||| |||||||||| | |||| ||||||  ||||||| |||||  |||||||||||||||||||||||||||||    
T  14855493 catgtttgcattagttttaacaacattttaacttttaaaatgttaaa-tttatctcttttcactattttttaatactatatttctatttttatcccctta 14855395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 285 - 389
Target Start/End: Original strand, 37433267 - 37433369
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||||||||||||||||||||||||| ||||| |||||| |||| ||||||| |||||| |||||| ||||  ||||| || ||||||||||||||||    
T  37433267 atgtttgcattggtttcaacaacattttaacttt-aaaaagttaaa-tttatcacttttcatcatttttcaatgttatatgtcgatttttatccccttat 37433364  T
Q  385 ccaat 389  Q
    |||||    
T  37433365 ccaat 37433369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 304 - 391
Target Start/End: Complemental strand, 5129545 - 5129459
Alignment:
Q  304 caacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 391  Q
    ||||||||||||||||||||| || |||||||||| |||||| |||||| |||| ||||||||| ||||||||||||||||| |||||    
T  5129545 caacattttgacttttaaaaa-attaaatttatcacttttcatcatttttcaatgctatatttcaatttttatccccttatcaaatgc 5129459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 329 - 393
Target Start/End: Original strand, 7532829 - 7532893
Alignment:
Q  329 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccc 393  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  7532829 aaattcatcacttttcaccattttccaatacaatatttctatttttatccccttaaccaatgccc 7532893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 302 - 377
Target Start/End: Complemental strand, 31596512 - 31596438
Alignment:
Q  302 aacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 377  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||||||||  || || |||||||||||||||||    
T  31596512 aacaatattttgacttttaaaaag-taaaattcatcatttttcaccattttttaacacaatatttctatttttatc 31596438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 297 - 383
Target Start/End: Original strand, 26892799 - 26892884
Alignment:
Q  297 gtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||| || ||||| |||||||||||| |||| |||||||||||| || ||||| ||||| ||||||||||||||||||| ||||    
T  26892799 gtttcaataatattttaacttttaaaaagttaaa-tttatcattttttacaatttttcaatattatatttctatttttatcctctta 26892884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 329 - 391
Target Start/End: Original strand, 44874369 - 44874431
Alignment:
Q  329 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgc 391  Q
    |||||||||| ||||||||||||| ||||  ||||||| ||||||||||||||||||||||||    
T  44874369 aaatttatcacttttcaccatttttcaatgttatatttatatttttatccccttatccaatgc 44874431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 316 - 397
Target Start/End: Original strand, 35930168 - 35930248
Alignment:
Q  316 ttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    |||||||||| |||| ||||| |||||||| |||||| ||||||||||||| ||||||||||  |||||||||||| |||||    
T  35930168 ttttaaaaagttaaa-tttattatttttcatcatttttcaatactatatttttatttttatcttcttatccaatgctccaag 35930248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 288 - 376
Target Start/End: Original strand, 6433548 - 6433635
Alignment:
Q  288 tttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttat 376  Q
    ||||||||||||| ||||| ||||| |||||||||||| | |||||||| | |||| |||||||| |||| |||||||| |||||||||    
T  6433548 tttgcattggttttaacaatattttaacttttaaaaag-ttaaatttataactttttaccatttttcaatgctatatttttatttttat 6433635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 33741586 - 33741523
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttca 345  Q
    |||||| ||||||||||||||||||| ||||| |||||||||||| | |||||||||||||||||    
T  33741586 taacatatttgcattggtttcaacaatattttaacttttaaaaag-ttaaatttatcatttttca 33741523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 25636780 - 25636694
Alignment:
Q  302 aacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatg 390  Q
    ||||| ||||||||||| ||||| |||||||| |||||||||  | |||||  ||||| |||||||||||||||||| |||||||||||    
T  25636780 aacaatattttgactttaaaaaa-ataaaattaatcatttttttctattttt-aatacaatatttctatttttatcctcttatccaatg 25636694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 25690929 - 25690855
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttt 373  Q
    ||||| || ||||||||||||||||| |||||||| |||||||||| | |||||  ||||  |||||||||||||    
T  25690929 ttcaaaaatattttgacttttaaaaaaataaaattaatcatttttctctattttttaatatgatatttctatttt 25690855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 11332888 - 11332796
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgcc 392  Q
    ||||||||  ||||||||||||||||| |||| | | ||| ||| ||||||||  |||||| |||||||||||||||||  |||| ||||||||    
T  11332888 ttcaacaatgttttgacttttaaaaagttaaattct-tcactttacaccatttctcaatacaatatttctatttttatcttcttaaccaatgcc 11332796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 19976545 - 19976488
Alignment:
Q  340 ttttcaccattttccaatactatatttctatttttatccc-cttatccaatgccccaa 396  Q
    ||||||||||||| ||||| |||||||||| ||||||||| ||||||||| |||||||    
T  19976545 ttttcaccatttttcaatattatatttctacttttatcccacttatccaaagccccaa 19976488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 299 - 377
Target Start/End: Complemental strand, 34421412 - 34421335
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 377  Q
    ||||||||  |||||| |||||||||| | || ||| |||||||||||||||| | ||||| || ||||||||||||||    
T  34421412 ttcaacaatgttttgatttttaaaaagttgaatttt-tcatttttcaccatttccaaatacaatgtttctatttttatc 34421335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 30351592 - 30351637
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaa 330  Q
    ||||||||||||| |||||||| ||||| |||||||||||| ||||    
T  30351592 atgtttgcattggattcaacaatattttaacttttaaaaagttaaa 30351637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 3e-35; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 6866915 - 6867026
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||| |||||||||||||||||||||||||| | |||| ||||||| |||||||||||||| ||| |||||||| ||||||||||||||||    
T  6866915 catgtttgcattgatttcaacaacattttgacttttaaaaggttaaa-tttatcacttttcaccattttcaaatgctatatttttatttttatcccctta 6867013  T
Q  384 tccaatgccccaa 396  Q
    |||||||||||||    
T  6867014 tccaatgccccaa 6867026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 12191493 - 12191604
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||| |||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||| ||||| |||||||||||||||||||| ||||    
T  12191493 catgtttgtattgatttcaacaacattttgacttttaaaaa-attaaatttatcacttttcaccatttaccaatgctatatttctatttttatccactta 12191591  T
Q  384 tccaatgccccaa 396  Q
    |||||||| ||||    
T  12191592 tccaatgcgccaa 12191604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 295 - 397
Target Start/End: Original strand, 10855443 - 10855544
Alignment:
Q  295 tggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgcccc 394  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| |||||| |||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  10855443 tggtttcaacaacattttgacttttaaaaagttaaa-tttatcacttttcatcatttttcaatattatatttctatttttatccccttatcaaatgcccc 10855541  T
Q  395 aag 397  Q
    |||    
T  10855542 aag 10855544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 5578274 - 5578386
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    |||||||||||| |||||||||| |||||||||||||||||| |||| ||||||| || |||  ||||| |||| ||||||||||||||||||||||| |    
T  5578274 catgtttgcatttgtttcaacaatattttgacttttaaaaagttaaa-tttatcaattctcattatttttcaatgctatatttctatttttatcccctca 5578372  T
Q  384 tccaatgccccaag 397  Q
    ||||||||| ||||    
T  5578373 tccaatgcctcaag 5578386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 284 - 374
Target Start/End: Complemental strand, 7875290 - 7875201
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt 374  Q
    ||||| ||||||||||||||||| |||||||||||||||||| | |||||||||| |||||| ||||||||||| ||||||||||||||||    
T  7875290 catgtctgcattggtttcaacaatattttgacttttaaaaag-ttaaatttatcacttttcatcattttccaatgctatatttctattttt 7875201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 307 - 397
Target Start/End: Complemental strand, 29692427 - 29692338
Alignment:
Q  307 cattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    |||||||||| |||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||    
T  29692427 cattttgactcttaaaaagttaaa-tttatcacttttcaccatttttcaatactatatttctatttttatccatttatccaatgccccaag 29692338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 281 - 397
Target Start/End: Complemental strand, 8324216 - 8324101
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||  |||||||||||||||||||| | |||||||||| |||| ||||||||||||||| ||||  |||| |||| ||||||||||||||  |    
T  8324216 taacatgtttatattggtttcaacaacattttaatttttaaaaagttaaa-tttatcatttttcacaatttctcaatgctatgtttctatttttatcttc 8324118  T
Q  381 ttatccaatgccccaag 397  Q
    |||| ||||||||||||    
T  8324117 ttattcaatgccccaag 8324101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 26572186 - 26572079
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||| ||||| ||||| ||||||||||  || |||||||||| |||| | ||||||||     ||||||||||||||||||||||||    
T  26572186 catgtttgcattggttttaacaatattttaacttttaaaat-attaaatttatcactttttatcattttcc-----tatatttctatttttatcccctta 26572093  T
Q  384 tccaatgccccaag 397  Q
    ||||||||||||||    
T  26572092 tccaatgccccaag 26572079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 284 - 392
Target Start/End: Complemental strand, 16437691 - 16437592
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||| ||||| |||||||||||| ||||         ||||||||||||||||||  ||||||||||||||||||| ||||    
T  16437691 catgtttgcattggtttcaacaatatttttacttttaaaaagttaaa---------ttttcaccattttccaatgttatatttctatttttatccactta 16437601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 281 - 396
Target Start/End: Complemental strand, 7274326 - 7274212
Alignment:
Q  281 taacatgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccc 380  Q
    ||||||||||| |||| ||||||||||||||| |||||||||| | |||| ||||||| |||||  |||||||||||  ||||||||||| ||||| |||    
T  7274326 taacatgtttgtattgatttcaacaacattttaacttttaaaatgttaaa-tttatcacttttcgtcattttccaatgttatatttctatatttattccc 7274228  T
Q  381 ttatccaatgccccaa 396  Q
    || ||||||| |||||    
T  7274227 ttgtccaatgtcccaa 7274212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 287 - 393
Target Start/End: Original strand, 28014638 - 28014743
Alignment:
Q  287 gtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatcc 386  Q
    ||||||||||| |||||||| ||||| |||||||||||| | ||| | ||||||||||||||||| ||||||| ||||||||| ||||| || |||| ||    
T  28014638 gtttgcattggattcaacaatattttaacttttaaaaag-tcaaactcatcatttttcaccatttcccaatacaatatttctaattttaccctcttaacc 28014736  T
Q  387 aatgccc 393  Q
    |||||||    
T  28014737 aatgccc 28014743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 284 - 374
Target Start/End: Complemental strand, 7880536 - 7880447
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctattttt 374  Q
    ||||| || ||| |||||||||| |||||||||||||||||| |||| ||||||| |||||| ||||||| ||| ||||||||||||||||    
T  7880536 catgtctgtattagtttcaacaatattttgacttttaaaaagttaaa-tttatcacttttcatcattttctaatgctatatttctattttt 7880447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 32786069 - 32786113
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagata 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  32786069 catgtttgcattggtttcaacaacattttgacttttaaaaagata 32786113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 299 - 377
Target Start/End: Complemental strand, 27127601 - 27127524
Alignment:
Q  299 ttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 377  Q
    |||||||| || ||||||||||||||| |||| || |||||||||||||||||  |||||| |||||||||||||||||    
T  27127601 ttcaacaatatcttgacttttaaaaagttaaa-ttcatcatttttcaccatttctcaatacaatatttctatttttatc 27127524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 285 - 378
Target Start/End: Original strand, 12175561 - 12175652
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcc 378  Q
    |||||||||||||||| || ||| |||| |||||||||||| |||| ||||||| |||| | |||||| ||||||||||||| |||||||||||    
T  12175561 atgtttgcattggttttaataac-ttttaacttttaaaaagttaaa-tttatcagtttttatcatttttcaatactatatttatatttttatcc 12175652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 32786260 - 32786327
Alignment:
Q  329 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaag 397  Q
    |||||||||  ||||||||||||||||||  ||||||||||||||||| |||||||||||| |||||||    
T  32786260 aaatttatctcttttcaccattttccaatgttatatttctatttttat-cccttatccaataccccaag 32786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 285 - 396
Target Start/End: Complemental strand, 31220435 - 31220325
Alignment:
Q  285 atgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttat 384  Q
    |||||||||||   ||||| |||||||| |||||||||||| |||| || |||| |||| |||||||| ||| || ||||||| ||||  |||| |||||    
T  31220435 atgtttgcattttattcaataacattttaacttttaaaaagttaaa-ttcatcactttttaccatttttcaaaacgatatttccatttccatcctcttat 31220337  T
Q  385 ccaatgccccaa 396  Q
    ||||||||||||    
T  31220336 ccaatgccccaa 31220325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 12769254 - 12769294
Alignment:
Q  335 atcatttttcaccattttccaatactatatttctattttta 375  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  12769254 atcatttttcaccatttttcaatattatatttctattttta 12769294  T

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Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 302 - 377
Target Start/End: Complemental strand, 20775084 - 20775010
Alignment:
Q  302 aacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 377  Q
    ||||| ||||| || ||||||||||| |||||||| ||||||||| ||||| |||| | ||||||| |||||||||    
T  20775084 aacaatattttaacctttaaaaagat-aaatttattatttttcacaatttttcaatgcaatatttcaatttttatc 20775010  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 308 - 389
Target Start/End: Complemental strand, 22414676 - 22414598
Alignment:
Q  308 attttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaat 389  Q
    |||||||||||||||||| ||||| | ||| ||||||| ||||||| ||||| |||||  | ||||||||| ||||||||||    
T  22414676 attttgacttttaaaaagttaaaa-tcatcttttttcatcattttctaatacaatatt--tttttttatcctcttatccaat 22414598  T

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Target: scaffold0062 (Bit Score: 74; Significance: 2e-33; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 16880 - 16773
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||| |||||||||||||||||| | | |||||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  16880 catgtttgcattggtttcaacaatattttgacttttaaaaag-ttacatttatcatttttcactatttt-caatgctatatttctatttttatcccctta 16783  T
Q  384 tccaatgccc 393  Q
    ||||||||||    
T  16782 tccaatgccc 16773  T

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Target: scaffold0062; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 27048 - 26941
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||| |||||||||||||||||| | | |||||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  27048 catgtttgcattggtttcaacaatattttgacttttaaaaag-ttacatttatcatttttcactatttt-caatgctatatttctatttttatcccctta 26951  T
Q  384 tccaatgccc 393  Q
    ||||||||||    
T  26950 tccaatgccc 26941  T

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Target: scaffold0062; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 37214 - 37107
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatcccctta 383  Q
    ||||||||||||||||||||||| |||||||||||||||||| | | |||||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  37214 catgtttgcattggtttcaacaatattttgacttttaaaaag-ttacatttatcatttttcactatttt-caatgctatatttctatttttatcccctta 37117  T
Q  384 tccaatgccc 393  Q
    ||||||||||    
T  37116 tccaatgccc 37107  T

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Target: scaffold0002 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 392241 - 392162
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatat 364  Q
    ||||||||||| |||||||||||||||||||||||||||||| | |||||||||| |||| |||||||| |||| ||||||    
T  392241 catgtttgcatcggtttcaacaacattttgacttttaaaaag-ttaaatttatcactttttaccatttttcaatgctatat 392162  T

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Target: scaffold0809 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 4335 - 4268
Alignment:
Q  329 aaatttatcatttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaa 396  Q
    |||||||||| ||||||| |||||||||| |||||||| ||||||||||||  ||||||||| |||||    
T  4335 aaatttatcacttttcacaattttccaatgctatatttttatttttatccctctatccaatgtcccaa 4268  T

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Target: scaffold0809; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 284 - 330
Target Start/End: Complemental strand, 4755 - 4709
Alignment:
Q  284 catgtttgcattggtttcaacaacattttgacttttaaaaagataaa 330  Q
    ||||||||||||  |||||||||||| ||||||||||||||| ||||    
T  4755 catgtttgcattaatttcaacaacatattgacttttaaaaagttaaa 4709  T

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Target: scaffold0144 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 39614 - 39679
Alignment:
Q  311 ttgacttttaaaaagataaaatttatcatttttcaccattttccaatactatatttctatttttatc 377  Q
    ||||||||||||||| |||| | | ||| ||||||| |||||||||||| || ||||||||||||||    
T  39614 ttgacttttaaaaagttaaattct-tcagttttcactattttccaatacaatgtttctatttttatc 39679  T

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