View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1763_low_73 (Length: 290)
Name: NF1763_low_73
Description: NF1763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1763_low_73 |
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Alignment Details
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 25 - 273
Target Start/End: Original strand, 5750163 - 5750411
Alignment:
| Q |
25 |
tgaacaatataaatcaaggtggactcaattaatatataccatactaccatttgcacatgcatatacacacaacacctaaaattgaagaataaagtattta |
124 |
Q |
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| T |
5750163 |
tgaacaatataaatcaaggtggactcaattaatatataccatactaccatttgcacatgcatatacacacaacacctaaaattgaagaataaagtattta |
5750262 |
T |
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| Q |
125 |
acatagctaaccaaaacaaacgaagataataaaaccaagattattacatgagtaaattaaccaagaggtcacaaaaatcaactaatttgaacttgaagac |
224 |
Q |
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| T |
5750263 |
acatagctaaccaaaacaaacgaagataataaaaccaagattattacatgagtaaattaaccaagaggtcacaaaaatcaactaatttgaacttgaagac |
5750362 |
T |
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| Q |
225 |
tctaaattaaattggtcaattaacgtagaacctttaaaactacttgaaa |
273 |
Q |
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| T |
5750363 |
tctaaattaaatttgtcaattaacgtagaacctttaaaactacttgaaa |
5750411 |
T |
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