View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1763_low_85 (Length: 262)
Name: NF1763_low_85
Description: NF1763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1763_low_85 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 10048166 - 10048427
Alignment:
| Q |
1 |
attttaaactcacgcagaaagaatgatgagatgaattattttactgtaacttttaaatttttaaaattaatttgaaaagttcgattttggcgcgactatt |
100 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| ||||||||||||||||| |
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| T |
10048166 |
attttaaactcacgcagaaagac-gatgagatgaattattttacagcaacttttaaatttt-aaaattaatttgaaaagtttgattttggcgcgactata |
10048263 |
T |
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| Q |
101 |
taaagagcgaaactca--gagctaacacagaacgcgtgtgttgcttccttcaccaccttttcaaatttctgagcaagcatgaaaaagcgactcaacgacg |
198 |
Q |
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|||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
10048264 |
taaagagcgaaactcaaagagcttacacagaacgcgtgtgttgcttccttcaccaccttttcaaatttctgagcaagcatgaaaaagagactcaacgacg |
10048363 |
T |
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| Q |
199 |
ctacttcctccgacgccggagaactgccaccggcgaagcgaatccgacgtaacaaaaccatctg |
262 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
10048364 |
ctacttcctccgacgccggagaattgccaccggcgaagcgaatccgacgtaacaaaaccatctg |
10048427 |
T |
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