View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1763_low_86 (Length: 257)
Name: NF1763_low_86
Description: NF1763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1763_low_86 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 17 - 249
Target Start/End: Complemental strand, 38618630 - 38618398
Alignment:
| Q |
17 |
agagatcacgtagccgaatcagacaaggttcgtttcaatgtcactatgacccattgagctattctttgaattttgacacaagtgattgtggaagcttatt |
116 |
Q |
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| T |
38618630 |
agagatcacgtagccgaatcagacaaggttcgtttcaatgtcactatgacccattgagctattctttgaattttgacacaagtgattgtggaagcttatt |
38618531 |
T |
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| Q |
117 |
ggatgaggattactactataagttctgtgcattttcttcaaggtttgtggcaaatccaacaatttcatgtcctgttcttcaactatctgctggaaaatct |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38618530 |
ggatgaggattactactataagttctgtgcattttcttcaaggtttgtggcaaatccaacaatttcatgtcctgttcttcaactatctgctggaaaatct |
38618431 |
T |
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| Q |
217 |
caatagtaattaattactactaattagaataat |
249 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
38618430 |
caatagtaattaattactactaattagaataat |
38618398 |
T |
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