View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1763_low_99 (Length: 236)
Name: NF1763_low_99
Description: NF1763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1763_low_99 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 37228787 - 37229009
Alignment:
| Q |
14 |
cacaaataacaaaagtaatattgttttcagatattgtgaaagaaatatgttgggtatcagaatcaataataaccgggtttaggtgatgggaacaaatgca |
113 |
Q |
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| T |
37228787 |
cacaaataacaaaagtaatattgttttcagatattgtgaaagaaatatgttgggtatcagaatcaataataaccgggtttaggtgatgggaacaaatgca |
37228886 |
T |
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| Q |
114 |
ccaacggtttggttcaaggttacctctattattgaaagcaaaaattttgagacctagtctatgaagccaggttgagggaaaagatgagaatttcatccat |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
37228887 |
ccaacggtttggttcaaggttacctctattattgaaagcaaaaattttgagacctagtctatgaagccaggttgagggaaaagatgagtatttcatccat |
37228986 |
T |
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| Q |
214 |
ggttcagctatgaggatgatctc |
236 |
Q |
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||||||||||||||||||||||| |
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| T |
37228987 |
ggttcagctatgaggatgatctc |
37229009 |
T |
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