View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17640_high_28 (Length: 345)

Name: NF17640_high_28
Description: NF17640
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17640_high_28
NF17640_high_28
[»] chr7 (46 HSPs)
chr7 (13-270)||(32432695-32432953)
chr7 (13-170)||(29173765-29173922)
chr7 (13-170)||(15612520-15612677)
chr7 (13-170)||(17842345-17842502)
chr7 (25-170)||(4583174-4583319)
chr7 (13-170)||(6546762-6546919)
chr7 (13-170)||(37110117-37110274)
chr7 (13-168)||(24211984-24212140)
chr7 (13-131)||(18797570-18797688)
chr7 (13-170)||(7335036-7335193)
chr7 (13-170)||(30055770-30055927)
chr7 (13-170)||(37703259-37703416)
chr7 (32-132)||(43925357-43925457)
chr7 (13-132)||(22687474-22687593)
chr7 (25-131)||(25691344-25691450)
chr7 (25-170)||(26587853-26587998)
chr7 (13-170)||(26980549-26980706)
chr7 (13-170)||(35353351-35353508)
chr7 (13-167)||(9355590-9355744)
chr7 (15-170)||(15672518-15672675)
chr7 (13-170)||(8861528-8861685)
chr7 (13-170)||(31520502-31520659)
chr7 (13-131)||(32820853-32820971)
chr7 (13-155)||(46480905-46481047)
chr7 (13-170)||(12390410-12390567)
chr7 (58-170)||(38258867-38258979)
chr7 (25-164)||(31578831-31578970)
chr7 (13-113)||(11071446-11071546)
chr7 (37-167)||(23111459-23111589)
chr7 (13-169)||(27283987-27284145)
chr7 (25-170)||(10358975-10359120)
chr7 (13-158)||(10481848-10481993)
chr7 (13-132)||(37347264-37347383)
chr7 (14-170)||(41764839-41764995)
chr7 (14-170)||(48928058-48928214)
chr7 (13-170)||(5657241-5657399)
chr7 (13-132)||(34361975-34362096)
chr7 (25-126)||(44411345-44411446)
chr7 (13-170)||(21991879-21992027)
chr7 (13-113)||(37704425-37704525)
chr7 (13-101)||(12165986-12166074)
chr7 (13-132)||(32593006-32593124)
chr7 (81-170)||(44598978-44599066)
chr7 (96-170)||(12166215-12166289)
chr7 (260-331)||(32435485-32435558)
chr7 (13-60)||(38053704-38053751)
[»] chr6 (15 HSPs)
chr6 (13-170)||(3879698-3879855)
chr6 (13-170)||(6090941-6091098)
chr6 (13-170)||(20768350-20768507)
chr6 (13-169)||(1946102-1946260)
chr6 (13-132)||(33892809-33892928)
chr6 (37-131)||(21016916-21017010)
chr6 (13-170)||(5627659-5627817)
chr6 (13-168)||(7054533-7054689)
chr6 (13-170)||(7234791-7234951)
chr6 (14-125)||(4318626-4318737)
chr6 (13-131)||(33619098-33619219)
chr6 (13-162)||(8513496-8513638)
chr6 (13-132)||(6089171-6089283)
chr6 (13-132)||(29182432-29182548)
chr6 (75-126)||(33724062-33724113)
[»] chr3 (52 HSPs)
chr3 (13-170)||(4015718-4015875)
chr3 (13-170)||(21193866-21194023)
chr3 (13-170)||(33378545-33378702)
chr3 (37-169)||(39282935-39283067)
chr3 (13-170)||(22622478-22622635)
chr3 (13-170)||(40552019-40552176)
chr3 (25-170)||(53228912-53229057)
chr3 (13-170)||(26941020-26941177)
chr3 (13-170)||(48355200-48355357)
chr3 (13-132)||(24707913-24708032)
chr3 (13-168)||(47481781-47481937)
chr3 (13-168)||(42505837-42505992)
chr3 (13-130)||(11357181-11357298)
chr3 (13-170)||(29099605-29099763)
chr3 (13-130)||(52040722-52040839)
chr3 (13-170)||(37157967-37158124)
chr3 (13-170)||(37203327-37203484)
chr3 (25-170)||(46297522-46297667)
chr3 (13-131)||(7327281-7327399)
chr3 (25-131)||(24488761-24488867)
chr3 (13-170)||(21009561-21009719)
chr3 (13-167)||(33698412-33698566)
chr3 (13-170)||(36012398-36012556)
chr3 (13-132)||(22451227-22451346)
chr3 (13-132)||(44186315-44186434)
chr3 (53-168)||(20373025-20373140)
chr3 (37-170)||(3362538-3362671)
chr3 (13-170)||(43975652-43975809)
chr3 (39-163)||(1089978-1090102)
chr3 (37-164)||(54506090-54506218)
chr3 (13-131)||(4761447-4761565)
chr3 (13-131)||(44891756-44891874)
chr3 (13-170)||(2008191-2008355)
chr3 (25-170)||(14586440-14586585)
chr3 (13-169)||(22445826-22445982)
chr3 (13-107)||(34133194-34133288)
chr3 (13-170)||(51212537-51212688)
chr3 (13-170)||(32373729-32373885)
chr3 (58-170)||(11356918-11357030)
chr3 (37-132)||(40936256-40936351)
chr3 (76-170)||(11467132-11467226)
chr3 (39-131)||(25580024-25580116)
chr3 (13-131)||(29164068-29164179)
chr3 (13-101)||(46994490-46994578)
chr3 (25-132)||(50475082-50475196)
chr3 (32-107)||(38591976-38592051)
chr3 (26-132)||(3654997-3655106)
chr3 (42-124)||(27480164-27480246)
chr3 (84-170)||(35844577-35844663)
chr3 (108-169)||(34133312-34133373)
chr3 (96-132)||(43348556-43348592)
chr3 (13-85)||(54828546-54828618)
[»] chr1 (52 HSPs)
chr1 (13-170)||(48353806-48353963)
chr1 (13-170)||(46931673-46931831)
chr1 (13-170)||(47279453-47279611)
chr1 (13-170)||(2960012-2960169)
chr1 (13-170)||(27532737-27532893)
chr1 (25-170)||(32216331-32216476)
chr1 (13-168)||(15168360-15168515)
chr1 (13-170)||(10922991-10923148)
chr1 (13-170)||(11742123-11742280)
chr1 (25-170)||(34012137-34012282)
chr1 (13-170)||(14758296-14758453)
chr1 (13-170)||(32267298-32267455)
chr1 (13-170)||(37451549-37451706)
chr1 (25-132)||(238306-238413)
chr1 (13-131)||(39393648-39393766)
chr1 (13-130)||(16415910-16416027)
chr1 (13-170)||(23999611-23999769)
chr1 (13-132)||(3309417-3309537)
chr1 (13-170)||(3535187-3535344)
chr1 (26-130)||(21289877-21289981)
chr1 (13-132)||(1547535-1547654)
chr1 (13-132)||(28769917-28770036)
chr1 (13-170)||(8222392-8222549)
chr1 (13-170)||(19899523-19899681)
chr1 (25-170)||(31962892-31963038)
chr1 (13-170)||(47682249-47682406)
chr1 (13-164)||(27763071-27763223)
chr1 (25-132)||(28564576-28564683)
chr1 (25-169)||(30254699-30254843)
chr1 (39-170)||(7078818-7078949)
chr1 (37-164)||(38823502-38823629)
chr1 (13-167)||(9902812-9902966)
chr1 (13-170)||(15383197-15383355)
chr1 (37-170)||(22170999-22171132)
chr1 (25-164)||(27563666-27563805)
chr1 (13-167)||(4330545-4330699)
chr1 (13-130)||(27227280-27227397)
chr1 (13-116)||(1359744-1359847)
chr1 (52-170)||(15752332-15752450)
chr1 (76-170)||(48620916-48621010)
chr1 (37-170)||(10181762-10181895)
chr1 (13-132)||(51129123-51129240)
chr1 (13-131)||(25160896-25161015)
chr1 (13-130)||(27266995-27267112)
chr1 (13-132)||(31621341-31621461)
chr1 (26-125)||(30326751-30326851)
chr1 (25-131)||(42721312-42721418)
chr1 (13-121)||(40885077-40885185)
chr1 (59-170)||(33725366-33725478)
chr1 (25-97)||(37618729-37618801)
chr1 (13-130)||(41926421-41926537)
chr1 (25-111)||(18422927-18423006)
[»] chr4 (49 HSPs)
chr4 (13-167)||(7703777-7703931)
chr4 (13-170)||(34361277-34361435)
chr4 (13-170)||(879334-879491)
chr4 (25-170)||(6864315-6864460)
chr4 (13-170)||(19440434-19440591)
chr4 (13-170)||(25184381-25184538)
chr4 (25-170)||(33816302-33816447)
chr4 (13-170)||(55240891-55241048)
chr4 (16-170)||(23431826-23431980)
chr4 (13-170)||(4205252-4205409)
chr4 (13-170)||(17272232-17272389)
chr4 (13-170)||(19089239-19089396)
chr4 (13-170)||(23761339-23761496)
chr4 (25-170)||(29583986-29584131)
chr4 (13-169)||(37775926-37776082)
chr4 (13-131)||(1815569-1815687)
chr4 (13-164)||(39400276-39400427)
chr4 (13-131)||(50764988-50765106)
chr4 (32-170)||(4598269-4598407)
chr4 (13-170)||(32912365-32912523)
chr4 (13-170)||(37287996-37288154)
chr4 (13-170)||(28002772-28002929)
chr4 (37-170)||(30002427-30002560)
chr4 (13-170)||(32579714-32579871)
chr4 (37-170)||(47254032-47254165)
chr4 (13-170)||(49376235-49376392)
chr4 (13-169)||(3042887-3043043)
chr4 (13-132)||(7152028-7152147)
chr4 (13-132)||(32592352-32592471)
chr4 (13-131)||(33341666-33341784)
chr4 (13-168)||(46887946-46888101)
chr4 (13-170)||(37663527-37663684)
chr4 (13-131)||(55477716-55477834)
chr4 (13-170)||(17173558-17173715)
chr4 (25-128)||(34947923-34948026)
chr4 (13-170)||(35020817-35020978)
chr4 (13-132)||(35025391-35025509)
chr4 (37-170)||(26896379-26896513)
chr4 (13-170)||(25700842-25700999)
chr4 (13-170)||(36493475-36493632)
chr4 (37-131)||(27396908-27397000)
chr4 (13-132)||(50697510-50697629)
chr4 (13-170)||(17167981-17168138)
chr4 (37-132)||(46883938-46884033)
chr4 (52-170)||(38012569-38012687)
chr4 (13-170)||(5047752-5047909)
chr4 (25-130)||(9139509-9139612)
chr4 (25-170)||(42200010-42200155)
chr4 (37-128)||(4934040-4934132)
[»] chr8 (42 HSPs)
chr8 (13-170)||(5299712-5299869)
chr8 (13-170)||(16446641-16446798)
chr8 (13-170)||(35859201-35859358)
chr8 (13-167)||(466099-466253)
chr8 (13-170)||(1149398-1149555)
chr8 (13-170)||(37970285-37970442)
chr8 (13-170)||(38644245-38644402)
chr8 (13-170)||(43643361-43643518)
chr8 (13-170)||(34895229-34895386)
chr8 (13-132)||(23854235-23854354)
chr8 (13-164)||(1953760-1953911)
chr8 (37-170)||(7890723-7890856)
chr8 (13-132)||(35459515-35459634)
chr8 (13-131)||(24823199-24823317)
chr8 (13-167)||(34951826-34951980)
chr8 (13-170)||(4132452-4132609)
chr8 (13-132)||(44869764-44869883)
chr8 (13-170)||(30654349-30654506)
chr8 (40-169)||(41362716-41362845)
chr8 (43-131)||(43025971-43026059)
chr8 (13-132)||(12587849-12587968)
chr8 (13-132)||(27082642-27082761)
chr8 (13-169)||(31933653-31933809)
chr8 (37-131)||(11727315-11727409)
chr8 (13-131)||(16223130-16223248)
chr8 (13-170)||(8803582-8803740)
chr8 (13-170)||(1205194-1205351)
chr8 (37-170)||(33198093-33198226)
chr8 (13-170)||(36694732-36694889)
chr8 (13-132)||(40862686-40862806)
chr8 (15-129)||(6098320-6098434)
chr8 (13-107)||(9864415-9864509)
chr8 (13-170)||(33906479-33906634)
chr8 (13-132)||(18259346-18259465)
chr8 (13-131)||(12876377-12876495)
chr8 (37-131)||(39098924-39099018)
chr8 (13-100)||(1149756-1149843)
chr8 (13-131)||(10555010-10555127)
chr8 (98-170)||(13307931-13308003)
chr8 (108-169)||(9864533-9864594)
chr8 (13-60)||(13307889-13307936)
chr8 (99-131)||(41910863-41910895)
[»] chr5 (52 HSPs)
chr5 (13-170)||(38527987-38528144)
chr5 (13-169)||(39573079-39573235)
chr5 (25-170)||(22981073-22981218)
chr5 (13-170)||(35511232-35511389)
chr5 (25-170)||(36867042-36867187)
chr5 (25-170)||(40133665-40133810)
chr5 (13-159)||(15992301-15992447)
chr5 (13-166)||(2888199-2888352)
chr5 (13-170)||(22255450-22255607)
chr5 (13-170)||(35934164-35934321)
chr5 (37-170)||(42343013-42343146)
chr5 (13-131)||(22973871-22973989)
chr5 (13-170)||(8437233-8437390)
chr5 (13-170)||(14409091-14409248)
chr5 (13-170)||(24886355-24886512)
chr5 (37-166)||(25669868-25669997)
chr5 (13-170)||(25889638-25889795)
chr5 (25-170)||(27330584-27330729)
chr5 (13-131)||(7208653-7208771)
chr5 (13-170)||(19120127-19120284)
chr5 (37-170)||(22019915-22020048)
chr5 (13-170)||(25500676-25500833)
chr5 (13-170)||(31705362-31705519)
chr5 (25-166)||(36860704-36860845)
chr5 (13-169)||(31786397-31786553)
chr5 (13-131)||(35826275-35826393)
chr5 (13-158)||(699418-699563)
chr5 (13-170)||(17157781-17157938)
chr5 (13-170)||(26269077-26269234)
chr5 (13-170)||(28416301-28416458)
chr5 (13-170)||(33908501-33908657)
chr5 (13-132)||(8741673-8741792)
chr5 (37-169)||(9200516-9200648)
chr5 (25-169)||(12910635-12910779)
chr5 (46-170)||(43254156-43254280)
chr5 (13-168)||(32563408-32563563)
chr5 (13-130)||(5830160-5830278)
chr5 (37-131)||(7693513-7693607)
chr5 (13-131)||(30969113-30969231)
chr5 (26-170)||(27318238-27318383)
chr5 (13-170)||(43308410-43308567)
chr5 (13-132)||(5837823-5837942)
chr5 (13-132)||(15724756-15724875)
chr5 (13-132)||(35504633-35504752)
chr5 (37-131)||(8467018-8467112)
chr5 (64-170)||(23115980-23116086)
chr5 (76-170)||(23954552-23954646)
chr5 (13-168)||(13956116-13956269)
chr5 (32-131)||(21088558-21088654)
chr5 (13-96)||(1428983-1429069)
chr5 (69-132)||(14919327-14919390)
chr5 (140-170)||(11898210-11898240)
[»] chr2 (41 HSPs)
chr2 (13-168)||(44913932-44914090)
chr2 (25-170)||(4167202-4167347)
chr2 (13-170)||(41961108-41961265)
chr2 (37-170)||(33660155-33660288)
chr2 (25-169)||(43648024-43648168)
chr2 (13-170)||(11366158-11366316)
chr2 (16-170)||(19424420-19424574)
chr2 (13-170)||(18494059-18494216)
chr2 (13-167)||(39167150-39167304)
chr2 (13-170)||(2325156-2325313)
chr2 (13-132)||(5881797-5881916)
chr2 (13-132)||(7006754-7006873)
chr2 (13-165)||(33709015-33709167)
chr2 (13-168)||(3177207-3177362)
chr2 (13-170)||(19289101-19289258)
chr2 (13-170)||(31862120-31862277)
chr2 (13-132)||(43770664-43770783)
chr2 (13-170)||(4763899-4764057)
chr2 (26-131)||(26357858-26357963)
chr2 (32-170)||(35959179-35959317)
chr2 (13-168)||(41051083-41051235)
chr2 (13-124)||(19500739-19500850)
chr2 (13-132)||(41465769-41465888)
chr2 (13-170)||(27349731-27349883)
chr2 (13-132)||(13711727-13711846)
chr2 (47-170)||(29241923-29242046)
chr2 (13-131)||(31570551-31570669)
chr2 (37-132)||(18257354-18257449)
chr2 (52-131)||(33902321-33902400)
chr2 (37-131)||(41463407-41463501)
chr2 (83-170)||(45328028-45328114)
chr2 (78-131)||(33550800-33550853)
chr2 (25-132)||(37905990-37906098)
chr2 (13-97)||(4478633-4478717)
chr2 (13-98)||(4263926-4264011)
chr2 (75-116)||(17053963-17054004)
chr2 (75-116)||(17071604-17071645)
chr2 (101-131)||(4263726-4263756)
chr2 (206-242)||(9200179-9200215)
chr2 (13-53)||(36642256-36642296)
chr2 (13-81)||(44286217-44286285)
[»] scaffold0002 (3 HSPs)
scaffold0002 (32-132)||(415-515)
scaffold0002 (13-132)||(408227-408346)
scaffold0002 (13-131)||(93900-94017)
[»] scaffold0291 (1 HSPs)
scaffold0291 (13-170)||(8155-8312)
[»] scaffold0318 (1 HSPs)
scaffold0318 (13-169)||(12177-12332)
[»] scaffold0061 (1 HSPs)
scaffold0061 (13-170)||(44224-44381)
[»] scaffold0017 (1 HSPs)
scaffold0017 (13-170)||(154406-154563)
[»] scaffold0022 (1 HSPs)
scaffold0022 (25-170)||(145775-145921)
[»] scaffold0008 (1 HSPs)
scaffold0008 (75-170)||(267606-267701)


Alignment Details
Target: chr7 (Bit Score: 165; Significance: 3e-88; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 13 - 270
Target Start/End: Original strand, 32432695 - 32432953
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| ||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32432695 aaaatagtacatgtaagtccaaggtgttgcaagcattactagatgaattattattaatcatgaatcaataatcaacaatttaaaaatgaatcaaacatta 32432794  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctcccnnnnnnnaatgtggcattaggaaacacaatgtcatctaggta 212  Q
    ||||||||| |||||||||        ||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  32432795 agattaaaagtaacttttttaaaaaagtcagtttcctgactgcaccgtagaagctccttttttttaatgtggcattaggaaacacaatgtcatctaggta 32432894  T
Q  213 tatggacattatatttaagatgattgattttgctattcggaca-gattaacggcgtaat 270  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  32432895 tatggacattgtatttaagatgattgattttgctattcggacaggattaacggtgtaat 32432953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 29173765 - 29173922
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | |||||| |||| |||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29173765 aaaatagtatctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 29173864  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       ||||||| ||||||||| |||||||||||||    
T  29173865 agattaaaattaactttttcaaaaaagtcagttttctgactgcatcgtagaagctccc 29173922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 15612677 - 15612520
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| ||||||  ||| |||||||| ||||| ||||||||||||| || ||||| |||||||||||||||||||||||||||||||| |||||    
T  15612677 aaaatagtacctgtaagtctaagatgttgcaagcattactagatgaattattgttgatcattaatcagtaatcaacaatttaaaaatgaatcaatcatta 15612578  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||||||||||||||        |||||||| ||||||||||||||||||||||    
T  15612577 agattaaaattaactttttaaaaaaagtcagtttcatgactgcaccgtagaagctccc 15612520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 17842502 - 17842345
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  17842502 aaaatagtacatgtaagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 17842403  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | |||||||||||||||| |       ||| |||| ||||||||||||||||||||||    
T  17842402 aaattaaaattaacttttccaaaaaagtcaatttcttgactgcaccgtagaagctccc 17842345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 4583174 - 4583319
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    ||||||||||| |||||||| ||||| | ||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  4583174 gtaagttcaagatgttgcaagcattactggatgaattactattaatcatgaatcagtcatcaacaatttaaaaatgaattaaacattaagattaaaatta 4583273  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||       ||| ||| ||| |||||||||||||||||||    
T  4583274 actttttcaaaaaagtcaattttctggctgcaccgtagaagctccc 4583319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 6546762 - 6546919
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| ||||||  ||| ||  |||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| |||||    
T  6546762 aaaatagtacctgtaagtctaagatgaggcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcatta 6546861  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||||||| ||||||||||||||||||||||    
T  6546862 agattaaaattaactttttcaaaaaagtcagtttcatgactgcaccgtagaagctccc 6546919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 37110117 - 37110274
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  37110117 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 37110216  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | |||||||||||||||| |       ||| |||| ||||||||||||||||||||||    
T  37110217 aaattaaaattaacttttccaaaaaaatcaatttcttgactgcaccgtagaagctccc 37110274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 24211984 - 24212140
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt 111  Q
    |||||||||||  ||||| |||| |||||||| ||||| ||||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  24211984 aaaatagtacctataagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt 24212083  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctc 168  Q
    || || |||||||||||||||       |||||||||||||||||||||||||||||    
T  24212084 aaaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctc 24212140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 18797570 - 18797688
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  18797570 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 18797669  T
Q  113 agattaaaattaacttttt 131  Q
    |||| ||||||||||||||    
T  18797670 agatcaaaattaacttttt 18797688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 7335036 - 7335193
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||| | |||| |||||||| ||||| ||||||||||| |||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  7335036 aaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattaatcattaatcagaaatcaataatttaaaaatgaatcaaacatta 7335135  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||| ||||||       ||| ||||||||||||||| |||||||||||    
T  7335136 agatcaaaattaattttttcaaaaaagtcaatttcctgactgcaccatagaagctccc 7335193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 30055770 - 30055927
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| | |||    
T  30055770 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgtta 30055869  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||| ||       ||| |||||||||||||||||||||||||||    
T  30055870 aaatcaaaattaactttatcaaaaaagtcaatttcctgactgcaccgtagaagctccc 30055927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 37703416 - 37703259
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | |||||| |||| |||||||||||||| ||||||||||| |||| ||||| ||||| ||||||||||||||||||||||| ||||||||    
T  37703416 aaaatagtatctgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaattaaacatta 37703317  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       ||| ||| ||||||||||| |||||||||||    
T  37703316 agatcaaaattaactttttcaaaaaagtcaatttactgactgcaccatagaagctccc 37703259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 43925357 - 43925457
Alignment:
Q  32 caaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 131  Q
    |||| |||||||| ||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43925357 caagatgttgcaagcattactagatgaattactattaatcatgaatcactaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 43925456  T
Q  132 c 132  Q
    |    
T  43925457 c 43925457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 22687474 - 22687593
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||| ||||||    
T  22687474 aaaatagtacatgtaagtccaagatgttgcaagcattaatagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcatacatta 22687573  T
Q  113 agattaaaattaactttttc 132  Q
    ||||||||||||||||||||    
T  22687574 agattaaaattaactttttc 22687593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 25691450 - 25691344
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    ||||||||||  |||||||||||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25691450 gtaagttcaaaatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 25691351  T
Q  125 acttttt 131  Q
    | |||||    
T  25691350 aattttt 25691344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 26587998 - 26587853
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||  ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26587998 gtaagtccaagatgttgcaggcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaaatta 26587899  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||       |||||||| ||| ||| ||||||||||||||    
T  26587898 actttttcaaaaaagtcagtttcatgattgcgccgtagaagctccc 26587853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 26980549 - 26980706
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | ||||||  ||| ||||||||  |||| ||||||||||||| || ||||| |||| ||||||||||||||||||||||||||| |||||    
T  26980549 aaaatagtatctgtaagtctaagatgttgcaagtattactagatgaattattgttgatcattaatcggtaatcaacaatttaaaaatgaatcaatcatta 26980648  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||||||| |||||||||| |||||||||||    
T  26980649 agattaaaattaactttttcaaaaaagtcagtttcatgactgcaccttagaagctccc 26980706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 35353351 - 35353508
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||   ||||| |||| |||||||| ||||| ||||||||| | |||| ||||| |||||| ||||||||||||||||||||||| |||||||    
T  35353351 aaaatagtacatttaagtccaagatgttgcaagcattactagatgaatcactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacatta 35353450  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       ||||||||||||||||||| |||||||||||    
T  35353451 agatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccttagaagctccc 35353508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 9355744 - 9355590
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||  |||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  9355744 aaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcaataatcaacaatttaaaaatgaatcaaacatta 9355645  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagct 167  Q
    | || |||||||||||||||       ||||||||||| ||||||| ||||||||    
T  9355644 aaatcaaaattaactttttcaaaaaagtcagtttcctgcctgcaccatagaagct 9355590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 15 - 170
Target Start/End: Complemental strand, 15672675 - 15672518
Alignment:
Q  15 aatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaag 114  Q
    ||||||||| |||||| |||  |||||||| ||||| ||||||||||| |||| |||||| |||| ||||||||||||||||||||||| ||||||||||    
T  15672675 aatagtacctgtaagtccaaaatgttgcaagcattactagatgaattactattgatcatgcatcaataatcaacaatttaaaaatgaattaaacattaag 15672576  T
Q  115 attaaaattaactttttcnnnnnnntcagtttcctgactgcacc--gtagaagctccc 170  Q
     |||||||||| ||||||       |||||||||||||||||||  ||||||||||||    
T  15672575 gttaaaattaattttttcaaaaaagtcagtttcctgactgcaccctgtagaagctccc 15672518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 8861528 - 8861685
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| |||||||  ||||| |||||||| || |||| ||||| ||||||||||||||||||||||||||||||||||| ||    
T  8861528 aaaatagtacatgtaagtctaagatgttgcatgcattactagatgaaatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacacta 8861627  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||||||| | |||||||||| |||||||||    
T  8861628 agattaaaattaactttttcaaaaaagtcagtttcatcactgcaccgttgaagctccc 8861685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 31520659 - 31520502
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | |||||| |||| |||||||| ||||| | ||||||||| |||| ||||| |||| ||||| |||||||||||||||||||||||||||    
T  31520659 aaaatagtatctgtaagtccaagatgttgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatcaaacatta 31520560  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| | |||||||||||||       |||||||||| |||||||| |||||||||||    
T  31520559 agatcataattaactttttcaaaaaagtcagtttcctaactgcaccatagaagctccc 31520502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 32820971 - 32820853
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| |||||||| ||||| ||||||||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  32820971 aaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattaatcattcatcaataatcaacaatttaaaaatgaatcaaacatta 32820872  T
Q  113 agattaaaattaacttttt 131  Q
    |||| ||||||||||||||    
T  32820871 agatcaaaattaacttttt 32820853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 155
Target Start/End: Complemental strand, 46481047 - 46480905
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| |||||||||||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||| ||| ||||||||    
T  46481047 aaaatagtacatgtaagtctaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaataaaacatta 46480948  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgc 155  Q
    |||| | |||||||||||||       ||||||||||||||||    
T  46480947 agatcataattaactttttcaaaaaagtcagtttcctgactgc 46480905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 12390567 - 12390410
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||  ||||||||||||||||  ||||||||    
T  12390567 aaaatagtacatgtaagtccaagatgttgcaaccattactagatgaattactatttatcattaatcagtaattgacaatttaaaaatgaaataaacatta 12390468  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| ||||||||||||| |       ||| |||||||||| ||||||||||||||||    
T  12390467 agatcaaaattaacttttccaaaaaagtcaatttcctgacttcaccgtagaagctccc 12390410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 58 - 170
Target Start/End: Original strand, 38258867 - 38258979
Alignment:
Q  58 aattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtttcctgactgcac 157  Q
    ||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||       ||||||| ||||||||||    
T  38258867 aattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaaatcagttttctgactgcac 38258966  T
Q  158 cgtagaagctccc 170  Q
    |||||||||||||    
T  38258967 cgtagaagctccc 38258979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 25 - 164
Target Start/End: Complemental strand, 31578970 - 31578831
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||| ||||||| ||||||||||||||||||||| ||| || |||||||    
T  31578970 gtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaataatttaaaaatgaatcaaacaataaaatcaaaatta 31578871  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaa 164  Q
    ||||||||       ||||||||||||||||||| |||||    
T  31578870 actttttcaaaaaagtcagtttcctgactgcaccatagaa 31578831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 11071446 - 11071546
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    |||||| |||| |||||| |||| |||||||||||||| ||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  11071446 aaaataatacctgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcattaatcaacaatttaaaaatgaatcaaacatta 11071545  T
Q  113 a 113  Q
    |    
T  11071546 a 11071546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 37 - 167
Target Start/End: Original strand, 23111459 - 23111589
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnn 136  Q
    ||||| || ||||| |||| |||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||         
T  23111459 tgttgaaagcattactagaagaattactattgatcataaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaagttaacttttttaaaa 23111558  T
Q  137 nnntcagtttcctgactgcaccgtagaagct 167  Q
       ||||||| ||||||| ||||||||||||    
T  23111559 aagtcagttttctgactgtaccgtagaagct 23111589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 27283987 - 27284145
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaat-gaatcaaacatt 111  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||| |||||||||||  |||||||||||    
T  27283987 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaataatttaaaaataaaatcaaacatt 27284086  T
Q  112 aagattaaaattaa-ctttttcnnnnnnntcagtttcctgactgcaccgtagaagctcc 169  Q
    || || |||||||| |||||         ||| ||||||||||||||||||||||||||    
T  27284087 aaaatcaaaattaatcttttcaaaaaaagtcaatttcctgactgcaccgtagaagctcc 27284145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 10359120 - 10358975
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| | |||||| ||||| || |||| ||| |||| ||||| ||||| |||||||||||||||||||||||||||||||| ||| |||||||    
T  10359120 gtaagtccaagattttgcaagcattactaaatgatttactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattatgatcaaaatta 10359021  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||       | |||||| | ||||||||||||||||||||    
T  10359020 actttttcaaaaaagttagtttcttaactgcaccgtagaagctccc 10358975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 10481848 - 10481993
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| |||||||| |||| ||||||||  |||| ||||||||||| |||| ||| | |||||||||| |||||||||||||| ||| ||| ||||    
T  10481848 aaaatagtatccgtaagtccaagatgttgcaagtattactagatgaattactattgatcgttaatcagtaattaacaatttaaaaataaattaaatatta 10481947  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcacc 158  Q
    |||| |||||||||||||||       ||||||| |||||||||||    
T  10481948 agatcaaaattaactttttcaaaaaagtcagttttctgactgcacc 10481993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 37347264 - 37347383
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | |||||| |||| | |||||| ||||| | ||||||||| |||| ||||| |||| ||||| |||||||||||||||||||||||||||    
T  37347264 aaaatagtatctgtaagtccaagatattgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatcaaacatta 37347363  T
Q  113 agattaaaattaactttttc 132  Q
    |||| | |||||||||||||    
T  37347364 agatcataattaactttttc 37347383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 41764995 - 41764839
Alignment:
Q  14 aaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaa 113  Q
    |||||||||  |||||| |||| | |||||| ||||| | |||||||||||||| ||||| |||||| ||||||||||||||||||||| | ||||||||    
T  41764995 aaatagtacatgtaagtccaagattttgcaagcattactggatgaattattattgatcattaatcagcaatcaacaatttaaaaatgaaccgaacattaa 41764896  T
Q  114 gattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||| ||||||||| |||||       ||| ||||| |||| |||||||||| |||||    
T  41764895 gatcaaaattaaccttttcaaaaaagtcaatttcccgactccaccgtagaaactccc 41764839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 48928214 - 48928058
Alignment:
Q  14 aaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaa 113  Q
    |||||||||  |||||| |||| |||||||||||||| ||||||||||| |||| ||||| |||||  |||||||||||||||||| |||| |||||| |    
T  48928214 aaatagtacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaataaatcgaacattta 48928115  T
Q  114 gattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||| |||||||| |||||        ||| ||| || ||||||||||||||||||||    
T  48928114 gatcaaaattaatttttttaaaaaagtcaattttctaactgcaccgtagaagctccc 48928058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 5657399 - 5657241
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt- 111  Q
    ||||||||||  ||||||  ||| |||||||| ||||| ||||||||||| |||| ||||| ||| ||||||||| ||||||||||||||| || ||||     
T  5657399 aaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatgagtaatcaaaaatttaaaaatgaataaatcatta 5657300  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||||||||||||||||       |||||||| | ||||||  ||||||||||||    
T  5657299 aagattaaaattaactttttcaaaaatgtcagtttcataactgcattgtagaagctccc 5657241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 34362096 - 34361975
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt- 111  Q
    ||||||||| | |||||| |||| | |||||||||||| ||||||||||| | || ||||| ||||||| || ||||||||||||||||||||||||||     
T  34362096 aaaatagtatctgtaagtccaagatattgcaaacattactagatgaattacttttgatcattaatcagtcattaacaatttaaaaatgaatcaaacatta 34361997  T
Q  112 aaga-ttaaaattaactttttc 132  Q
    |||| |||||||||||||||||    
T  34361996 aagatttaaaattaactttttc 34361975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 44411446 - 44411345
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||| ||||| ||||||||||| |||| | ||| ||||||||||||||||||||||||||||| |||||||||||| | |||||    
T  44411446 gtaagtccaagatgttgcaagcattactagatgaattaatattgaccattaatcagtaatcaacaatttaaaaatgaatgaaacattaagatcataatta 44411347  T
Q  125 ac 126  Q
    ||    
T  44411346 ac 44411345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 21991879 - 21992027
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| ||     |||||||||| |||| |||||    || ||||||||||||||||||||||||||||||||    
T  21991879 aaaatagtacctgtaagtccaagatgttgcaagca-----agatgaattactattgatcat----cattaatcaacaatttaaaaatgaatcaaacatta 21991969  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||||||||| |||||       |||||||| ||| | ||||||||||||||||    
T  21991970 agattaaaattaaccttttcaaaaaagtcagtttcatgattacaccgtagaagctccc 21992027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 37704425 - 37704525
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | |||||| |||| |||||||| |||||  |||||||||| |||| ||||| ||| |||||||||||||||| |||||||||||||||||    
T  37704425 aaaatagtatctgtaagtccaagatgttgcaagcattaccagatgaattactattgatcattaattagtaatcaacaatttacaaatgaatcaaacatta 37704524  T
Q  113 a 113  Q
    |    
T  37704525 a 37704525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 12165986 - 12166074
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatga 101  Q
    ||||||||| | ||||||  ||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||    
T  12165986 aaaatagtatctgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 12166074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 32593124 - 32593006
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||| |||| |||| ||||| ||||| |||  ||||| |||||| |||||||||||| |||||||||  |||||||    
T  32593124 aaaatagtacatgtaagtccaagatgttacaaatattactagataaattactatggatcattaatcagcaatcaacaattt-aaaatgaattgaacatta 32593026  T
Q  113 agattaaaattaactttttc 132  Q
    |||| |||||||||||||||    
T  32593025 agatcaaaattaactttttc 32593006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 170
Target Start/End: Original strand, 44598978 - 44599066
Alignment:
Q  81 taatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||| |||||||| | |||||||||||||||| ||||||       |||||||| |||||||||||||||| |||||    
T  44598978 taatcaacaatttaaaa-tgaatcaatcgttaagattaaaattaattttttcaaaaaaatcagtttcatgactgcaccgtagaaactccc 44599066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 12166215 - 12166289
Alignment:
Q  96 aaatgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||||||||||||||||||        |||||||| ||||||||  ||||||||||||    
T  12166215 aaatgaatcaaacattaagattaaaattaacttttttagaaaagtcagtttcatgactgcagtgtagaagctccc 12166289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 331
Target Start/End: Original strand, 32435485 - 32435558
Alignment:
Q  260 aacggcgtaatttattgtcaatcatttggannnnnnnnn--gttgaaattttattcaaatttaagggtattttg 331  Q
    ||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||    
T  32435485 aacggcgtaatttattgtcaatcatttggattttttttgttgttgaaattttattcaaatttaagggtattttg 32435558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 38053704 - 38053751
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat 60  Q
    ||||||||||| |||||| |||| |||||||||||||||| |||||||    
T  38053704 aaaatagtacctgtaagtccaagatgttgcaaacattatttgatgaat 38053751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 5e-50; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 3879855 - 3879698
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3879855 aaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattactattgatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 3879756  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||| ||||    
T  3879755 agattaaaattaactttttcaaaaaaatcagtttcctgactgcaccgtagaaggtccc 3879698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 6091098 - 6090941
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  6091098 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 6090999  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| ||||||||||||||        | ||||| |||||||||||||||||||||||    
T  6090998 agatcaaaattaacttttttaaaaaagtaagttttctgactgcaccgtagaagctccc 6090941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 20768350 - 20768507
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| ||||||||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||  |||||||    
T  20768350 aaaatagtacatgtaagtccaaggtgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattgaacatta 20768449  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       ||| |||||||||||||||||||||||||||    
T  20768450 agatcaaaattaactttttcaaaaaaatcaatttcctgactgcaccgtagaagctccc 20768507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 1946102 - 1946260
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt 111  Q
    ||||||||||  |||||| |||| |||| ||| ||||||||||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  1946102 aaaatagtacatgtaagtccaagatgttacaagcattattagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt 1946201  T
Q  112 aagattaaaattaacttttt-cnnnnnnntcagtttcctgactgcaccgtagaagctcc 169  Q
    || || |||||||||||||| |       ||||||||||||||||||||||||||||||    
T  1946202 aaaatcaaaattaacttttttcaaaaaagtcagtttcctgactgcaccgtagaagctcc 1946260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 33892928 - 33892809
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||||||||| || |||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  33892928 aaaatagtacatgtaagtccaagatgttgcaaacattactaaatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacatta 33892829  T
Q  113 agattaaaattaactttttc 132  Q
    || |||||||||||||||||    
T  33892828 aggttaaaattaactttttc 33892809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 21017010 - 21016916
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 131  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  21017010 tgttgcaagcattactagatgaattactattaatcatgaatcagtaatcaacaatttataaatgaatcaaatattaagattaaaattaacttttt 21016916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 5627659 - 5627817
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt 111  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||| ||||| || |||| ||||| ||||||||||||||||||||||||||||||||| |||    
T  5627659 aaaatagtacctgtaagtccaagatgttgcaagcattactaggtgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatatt 5627758  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    || || |||||||| |||||        |||||||||||||||||||||||||||||||    
T  5627759 aaaatcaaaattaatttttttaaaaaaatcagtttcctgactgcaccgtagaagctccc 5627817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 7054689 - 7054533
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt 111  Q
    ||||||||| | |||||| |||| |||||||||||||| || |||||| || |||| ||||| ||||| |||||||||||||||| ||||||||||||||    
T  7054689 aaaatagtaactgtaagtccaagatgttgcaaacattactaaatgaatatactattgatcattaatcattaatcaacaatttaaagatgaatcaaacatt 7054590  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctc 168  Q
    || || |||||||||||||||       |||||||| ||||||||||||| ||||||    
T  7054589 aaaatcaaaattaactttttcaaaaaagtcagtttcttgactgcaccgtaaaagctc 7054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 7234951 - 7234791
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaa---tcaacaatttaaaaatgaatcaaaca 109  Q
    ||||||||||  |||||| |||| |||||||||||||| ||||||||||| |||| ||||| |||||  ||   |||||||||||||||| |||| ||||    
T  7234951 aaaatagtacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaacaacaatcaacaatttaaaaataaatcgaaca 7234852  T
Q  110 ttaagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||| |||||||||||||||       ||| |||||||||| ||||||| ||||||||    
T  7234851 ttaagatcaaaattaactttttcaaaaaaatcattttcctgactacaccgtaaaagctccc 7234791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 4318737 - 4318626
Alignment:
Q  14 aaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaa 113  Q
    |||||||||  | |||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||| ||||||||||||||||||| |||||||||||||    
T  4318737 aaatagtacgggaaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcattaatcaacaatttaaaaataaatcaaacattaa 4318638  T
Q  114 gattaaaattaa 125  Q
     |||||||||||    
T  4318637 aattaaaattaa 4318626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 33619098 - 33619219
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaat---cagtaatcaacaatttaaaaatgaatcaaaca 109  Q
    ||||||||||  |||||| |||  |||||||| ||||| ||||||||||| |||| ||||| |||   ||| ||||||||||||||||||||||| ||||    
T  33619098 aaaatagtacatgtaagtccaatatgttgcaagcattactagatgaattactattgatcattaatgatcagcaatcaacaatttaaaaatgaatcgaaca 33619197  T
Q  110 ttaagattaaaattaacttttt 131  Q
    ||||||||||||||||||||||    
T  33619198 ttaagattaaaattaacttttt 33619219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 8513496 - 8513638
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||  | |||||| ||||| ||||||||||| |||| |||||       ||||||||||||||||||||||||||||||||    
T  8513496 aaaatagtaccggtaagtccaaaatcttgcaagcattactagatgaattactattgatcat-------taatcaacaatttaaaaatgaatcaaacatta 8513588  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtag 162  Q
    | ||||||||||||||||||       |||||||| ||||||||||||||    
T  8513589 aaattaaaattaactttttcaaaaaagtcagtttcatgactgcaccgtag 8513638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 6089171 - 6089283
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||  |||||||| ||||| || |||||||| |||| |||||       ||||||||||||||||||||||||||||||||    
T  6089171 aaaatagtaccagtaagtccaaaatgttgcaagcattactatatgaattactattgatcat-------taatcaacaatttaaaaatgaatcaaacatta 6089263  T
Q  113 agattaaaattaactttttc 132  Q
    | ||||||||||| ||||||    
T  6089264 aaattaaaattaattttttc 6089283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 29182432 - 29182548
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| ||||||||  |||| ||||||||||| |    ||||| |||||  ||||||||||||||||||||||||| |||||    
T  29182432 aaaatagtacttgtaagtctaagatgttgcaagtattactagatgaattactg---atcattaatcaacaatcaacaatttaaaaatgaatcaatcatta 29182528  T
Q  113 agattaaaattaactttttc 132  Q
    ||| ||||||||||||||||    
T  29182529 agactaaaattaactttttc 29182548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 33724113 - 33724062
Alignment:
Q  75 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaac 126  Q
    ||||| ||| |||||||||||||||||||||||||||||||| |||||||||    
T  33724113 aatcattaagcaacaatttaaaaatgaatcaaacattaagatcaaaattaac 33724062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 4015718 - 4015875
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  4015718 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 4015817  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||||||| ||||||||||||||||||||||    
T  4015818 agattaaaattaactttttcaaaaaagtcagtttcatgactgcaccgtagaagctccc 4015875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 21193866 - 21194023
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| ||||||||||||| |||||||| ||||| || |||||||| |||| || || ||||||||||||||||||||||||||||||||||||||    
T  21193866 aaaatagtagccgtaagttcaagatgttgcaaccattactaaatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaacatta 21193965  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||||||| ||||||||||||||||||||||    
T  21193966 agattaaaattaactttttcaaaaaagtcagtttcatgactgcaccgtagaagctccc 21194023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 33378702 - 33378545
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||||||| |||||||||||||| ||||||||||| |||| ||||| ||||| |||||||| |||||||||||||||||||||||    
T  33378702 aaaatagtacatgtaagttcaagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacgatttaaaaatgaatcaaacatta 33378603  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||| ||||||       |||||||||||||||||||||||||||||||    
T  33378602 agattaaaattaattttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 33378545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 39282935 - 39283067
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnn 136  Q
    |||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||        
T  39282935 tgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaa 39283034  T
Q  137 nnntcagtttcctgactgcaccgtagaagctcc 169  Q
       ||||||||||||||||||||||||||||||    
T  39283035 aagtcagtttcctgactgcaccgtagaagctcc 39283067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 22622635 - 22622478
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  22622635 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaactatttaaaaatgaatcaaacatta 22622536  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||||||       |||||||||||||||||||||| ||||||||    
T  22622535 aaatcaaaattaactttttcaaaaaaatcagtttcctgactgcaccgtaaaagctccc 22622478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 40552176 - 40552019
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| || | |||||||| ||||| ||||||||||| |||| || || ||||||||||||||||||||||||||||||||||||||    
T  40552176 aaaatagtacatgtaagtccatgatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaacatta 40552077  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       ||||||||| |||||||||||||||||||||    
T  40552076 agatcaaaattaactttttcaaaaaagtcagtttccagactgcaccgtagaagctccc 40552019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 53229057 - 53228912
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    ||||||||||| |||||||| ||||| ||||||||||| |||| ||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  53229057 gtaagttcaagatgttgcaagcattactagatgaattagtattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaatta 53228958  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||| |       |||||| ||||||||||||||||||||||||    
T  53228957 acttttccaaaaaaatcagttgcctgactgcaccgtagaagctccc 53228912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 26941177 - 26941020
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| | |||    
T  26941177 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaagcgtta 26941078  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||||||       ||||||| |||||||||||||||||||||||    
T  26941077 aaatcaaaattaactttttcaaaaaagtcagttttctgactgcaccgtagaagctccc 26941020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 48355200 - 48355357
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | |||||| |||| ||||||||  |||| |||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||    
T  48355200 aaaatagtatctgtaagtccaagatgttgcaagtattactagatgaattattattgatcattaatcagtaagcaacaatttaaaaatgaatcaaacatta 48355299  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       ||| |||||| |||||||| |||||||||||    
T  48355300 agatcaaaattaactttttcaaaaaagtcaatttcctaactgcaccatagaagctccc 48355357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 24708032 - 24707913
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| ||||  ||||||| ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24708032 aaaatagtacatgtaagtccaagaagttgcaagcattattagataaattactattaatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 24707933  T
Q  113 agattaaaattaactttttc 132  Q
    | ||||||||||||||||||    
T  24707932 aaattaaaattaactttttc 24707913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 47481781 - 47481937
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt 111  Q
    ||||||||||  ||||||||||| |||||||| ||||| ||||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  47481781 aaaatagtacttgtaagttcaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt 47481880  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctc 168  Q
    || || |||||||||||||||       ||| ||||||||||| |||||||||||||    
T  47481881 aaaatcaaaattaactttttcaaaaaaatcaatttcctgactgtaccgtagaagctc 47481937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 42505992 - 42505837
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| | |||    
T  42505992 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgtta 42505893  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctc 168  Q
    | || |||||||||||| ||       ||| |||||||||||||||||||||||||    
T  42505892 aaatcaaaattaactttatcaaaaaagtcaatttcctgactgcaccgtagaagctc 42505837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 11357298 - 11357181
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  11357298 aaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 11357199  T
Q  113 agattaaaattaactttt 130  Q
    |||| |||||||||||||    
T  11357198 agatcaaaattaactttt 11357181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 29099605 - 29099763
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    |||||||||||  ||||| |||| |||||||| ||||| |||||||||||  ||| ||||| |||||| |||||||||||||||||||||||||||||||    
T  29099605 aaaatagtacctttaagtccaagatgttgcaagcattactagatgaattaccattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacatta 29099704  T
Q  113 agattaaaattaactttttc-nnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | ||||||||||||||||||        |||||||| ||||||||||||||||||||||    
T  29099705 atattaaaattaactttttcaaaaaaagtcagtttcatgactgcaccgtagaagctccc 29099763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 52040839 - 52040722
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||||||||| ||||||||| |||||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  52040839 aaaatagtacatgtaagtccaagatgttgcaaacattactagatgaatgattattgatcattaatgagtaatcaacaatttaaaaatgaatcaaacatta 52040740  T
Q  113 agattaaaattaactttt 130  Q
    |||| |||||||||||||    
T  52040739 agatcaaaattaactttt 52040722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 37157967 - 37158124
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||  ||| |||| ||||| |||||||||||  ||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  37157967 aaaatagtacatgtaagtccaatatgtcgcaagcattactagatgaattaccattgatcattaatgagtaatcaacaatttaaaaatgaatcaaacatta 37158066  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||||||       |||||||||||||||||||||||||||||||    
T  37158067 aaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 37158124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 37203327 - 37203484
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||  | | |||| ||||| |||||||||||  ||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  37203327 aaaatagtacctgtaagtccaatatatcgcaagcattactagatgaattaccattgatcattaatgagtaatcaacaatttaaaaatgaatcaaacatta 37203426  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||||||       |||||||||||||||||||||||||||||||    
T  37203427 aaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 37203484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 46297667 - 46297522
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  46297667 gtaagtccaagatgttgcaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaatta 46297568  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||        |||||||  ||||||||||||||||||||||    
T  46297567 acttttttaaaaaagtcagttttttgactgcaccgtagaagctccc 46297522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 7327399 - 7327281
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| |||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  7327399 aaaatagtacttgtaagtctaagatgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaatcaattatta 7327300  T
Q  113 agattaaaattaacttttt 131  Q
    |||||||||||||||||||    
T  7327299 agattaaaattaacttttt 7327281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 24488867 - 24488761
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    ||||||||||| |||||||| ||||| |||||| |||| |||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||    
T  24488867 gtaagttcaagatgttgcaagcattactagatgcattactattaatcatgaatcaataatcaataatttaaaaatgaatcaaacattaatattaaaatta 24488768  T
Q  125 acttttt 131  Q
    |||||||    
T  24488767 acttttt 24488761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 21009719 - 21009561
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt 111  Q
    ||||||||||| ||||||  ||| |||||||| ||||| ||||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  21009719 aaaatagtacctgtaagtctaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt 21009620  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    || || |||||||| |||||        ||||||||||||||||||||||||| |||||    
T  21009619 aaaatcaaaattaatttttttaaaaaagtcagtttcctgactgcaccgtagaaactccc 21009561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 33698412 - 33698566
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| ||||||  ||| | |||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||  |||||    
T  33698412 aaaatagtacctgtaagtctaagatattgcaagcattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaatgaatcagtcatta 33698511  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagct 167  Q
    ||||||||||||||||||||       |||||||| | | |||||||||||||||    
T  33698512 agattaaaattaactttttcaaaaaagtcagtttcataaatgcaccgtagaagct 33698566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 36012398 - 36012556
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    |||||||||||  ||||| |||  || ||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||| ||||||||||||    
T  36012398 aaaatagtaccgataagtccaaaatgctgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacatta 36012497  T
Q  113 agattaaaa-ttaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | ||||||| |||||||||||       |||||||| ||||||||||||||||||||||    
T  36012498 aaattaaaatttaactttttcaaaaaagtcagtttcatgactgcaccgtagaagctccc 36012556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 22451227 - 22451346
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| |||||||||||||||| ||||| |||||| |||||| |||||||||||||||| |||||||    
T  22451227 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattattattgatcattaatcagcaatcaaaaatttaaaaatgaatcgaacatta 22451326  T
Q  113 agattaaaattaactttttc 132  Q
    |||| |||||||||||||||    
T  22451327 agatcaaaattaactttttc 22451346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 44186434 - 44186315
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    |||||||||||  |||||  ||| |||||||| ||||| ||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  44186434 aaaatagtacctctaagtctaagatgttgcaagcattactagataaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 44186335  T
Q  113 agattaaaattaactttttc 132  Q
    |||||||||||||| |||||    
T  44186334 agattaaaattaacattttc 44186315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 20373140 - 20373025
Alignment:
Q  53 agatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtttcctgac 152  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||       |||||||||||||    
T  20373140 agatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcagtttcctgac 20373041  T
Q  153 tgcaccgtagaagctc 168  Q
    |||||| |||||||||    
T  20373040 tgcaccatagaagctc 20373025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 3362538 - 3362671
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnn 136  Q
    |||||||| ||||| | ||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |        
T  3362538 tgttgcaagcattactggatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcataattaacttttccaaaa 3362637  T
Q  137 nnntcagtttcctgactgcaccgtagaagctccc 170  Q
       ||| ||||||||||||||| |||||||||||    
T  3362638 aagtcaatttcctgactgcaccatagaagctccc 3362671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 43975809 - 43975652
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| | |||||| ||||| ||||||||||| |||| ||||| |||||| ||||||||||||||||||||||| |||||||    
T  43975809 aaaatagtacttgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacatta 43975710  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| || ||||| ||||||       ||||||| ||||||||||||||||| |||||    
T  43975709 agatcaagattaattttttcaaaagagtcagttttctgactgcaccgtagaaactccc 43975652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 39 - 163
Target Start/End: Original strand, 1089978 - 1090102
Alignment:
Q  39 ttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnn 138  Q
    |||||| ||||| ||||||||||| |||| ||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||           
T  1089978 ttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttttaaaaaa 1090077  T
Q  139 ntcagtttcctgactgcaccgtaga 163  Q
     |||||||||||||| |||||||||    
T  1090078 gtcagtttcctgactacaccgtaga 1090102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 37 - 164
Target Start/End: Original strand, 54506090 - 54506218
Alignment:
Q  37 tgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnn 135  Q
    |||||||| ||||| ||||||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||       
T  54506090 tgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaa 54506189  T
Q  136 nnnntcagtttcctgactgcaccgtagaa 164  Q
        ||| |||||||||||||||||||||    
T  54506190 aaaatcaatttcctgactgcaccgtagaa 54506218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 4761565 - 4761447
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    |||||||||||  ||||| |||  ||||||||||||||  |||||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||    
T  4761565 aaaatagtacctataagtccaaaatgttgcaaacattaccagatgaattactattaatcattaatcagaaatcaacaatttgaaaatgaatcaaacatta 4761466  T
Q  113 agattaaaattaacttttt 131  Q
    | || ||||||||||||||    
T  4761465 aaatcaaaattaacttttt 4761447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 44891756 - 44891874
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    |||||||||||   ||||  ||| |||||||| ||||| ||||||||||| | || ||||| |||||||||||||||||||||||||||||||| |||||    
T  44891756 aaaatagtacctacaagtctaagatgttgcaagcattactagatgaattactgttgatcattaatcagtaatcaacaatttaaaaatgaatcaatcatta 44891855  T
Q  113 agattaaaattaacttttt 131  Q
    |||||||||||||||||||    
T  44891856 agattaaaattaacttttt 44891874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 2008191 - 2008355
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaat-------caacaatttaaaaatgaatca 105  Q
    ||||||||||  |||||| |||| |||||||| ||||| |||||||| || |||| ||||| ||||||||||       |||||||||||||||||||||    
T  2008191 aaaatagtacttgtaagtccaagatgttgcaagcattactagatgaaataatattgatcattaatcagtaatcattaatcaacaatttaaaaatgaatca 2008290  T
Q  106 aacattaagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||||||||||||||||||||||       |||||||| ||| ||||||||| ||||||||    
T  2008291 aacattaagattaaaattaactttttcaaaaaagtcagtttcatgattgcaccgtaaaagctccc 2008355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 14586585 - 14586440
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||| ||||| ||||| ||||| || | ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14586585 gtaagtccaagatgttgcaagcattactagataaattactactgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaagattaaaatta 14586486  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | ||||||       ||||||||  || |||||| |||||||||||    
T  14586485 attttttcaaaaaagtcagtttcacgagtgcaccatagaagctccc 14586440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 22445982 - 22445826
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    |||||||||||  ||||| |||  ||||||||  |||| | ||||||||| |||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  22445982 aaaatagtacctttaagtccaaaatgttgcaagtattactggatgaattactattgatcattaatcagtaatcaacaatttaaatatgaatcaaacatta 22445883  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctcc 169  Q
    |||| | ||||||||||| |       ||||||||||||||||||  ||||||||||    
T  22445882 agatcataattaacttttccaaaaaagtcagtttcctgactgcactatagaagctcc 22445826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 34133194 - 34133288
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaa 107  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||||| || |||||||||||| ||||||||||||||||||||||||||||    
T  34133194 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactagtaatcatgaatcggtaatcaacaatttaaaaatgaatcaaa 34133288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 51212688 - 51212537
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||| |  |||||||||||||||||||||      ||||    
T  51212688 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaattaaaaatcaacaatttaaaaatgaa------atta 51212595  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       ||||||| ||||||||||| |||||||||||    
T  51212594 agatcaaaattaactttttcaaaaatgtcagttttctgactgcaccatagaagctccc 51212537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 32373729 - 32373885
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| |||||||| ||||| ||||||||||  |||| ||||| ||||||||||||||||||| |||||||||  | || ||    
T  32373729 aaaatagtacttgtaagtctaagatgttgcaagcattactagatgaatttctattgatcattaatcagtaatcaacaattt-aaaatgaattcatcaata 32373827  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       ||||||||  ||||| |||||||||||||||    
T  32373828 agattaaaattaactttttcaaaaaattcagtttcacgactgtaccgtagaagctccc 32373885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 58 - 170
Target Start/End: Complemental strand, 11357030 - 11356918
Alignment:
Q  58 aattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtttcctgactgcac 157  Q
    ||||| |||| ||||| ||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||       ||||||  ||||||||||    
T  11357030 aattactattcatcattaattagtaatcaacaatttaaaaatgaatccaacattaagatcaaaattaactttttcaaaaaagtcagttgtctgactgcac 11356931  T
Q  158 cgtagaagctccc 170  Q
    |||||| ||||||    
T  11356930 cgtagatgctccc 11356918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 37 - 132
Target Start/End: Original strand, 40936256 - 40936351
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttc 132  Q
    |||||||| ||||| ||||| ||||| |||| ||||| |||| |||||||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  40936256 tgttgcaagcattactagataaattactattgatcattaatcggtaatcaacaatttaaaaataaatcaatcattaagattgaaattaactttttc 40936351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 76 - 170
Target Start/End: Original strand, 11467132 - 11467226
Alignment:
Q  76 atcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||       |||||||  ||||||||||||||||||||||    
T  11467132 atcattaatcaacaatttaaaaatgaatcaatcattaagaataaaattaactttttcaaaaaagtcagtttgatgactgcaccgtagaagctccc 11467226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 25580024 - 25580116
Alignment:
Q  39 ttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 131  Q
    |||||| ||||| ||||||||||| |||| ||||| |||| | ||||||||||||||||||||| ||| |||||||||||| |||||||||||    
T  25580024 ttgcaagcattactagatgaattactattgatcattaatccgcaatcaacaatttaaaaatgaaccaatcattaagattaagattaacttttt 25580116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 29164068 - 29164179
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| |||| ||| ||||| ||||||||||| |||| |||||       ||||||||||||||||||| ||||||||||||    
T  29164068 aaaatagtacttgtaagtctaagatgttacaagcattactagatgaattactattgatcat-------taatcaacaatttaaaaataaatcaaacatta 29164160  T
Q  113 agattaaaattaacttttt 131  Q
    |||||||||||||||||||    
T  29164161 agattaaaattaacttttt 29164179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 46994578 - 46994490
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatga 101  Q
    ||||||||||| |||||| |||| | |||||| ||||| ||||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  46994578 aaaatagtacctgtaagtccaagatattgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatga 46994490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 50475082 - 50475196
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattatt-------aatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagatt 117  Q
    |||||| |||| |||||||| ||||| ||||||||||| ||||       |||||| ||||||||||||| ||||||||||||||||||||||||| ||     
T  50475082 gtaagtccaagatgttgcaagcattactagatgaattagtattgatcattaatcattaatcagtaatcaataatttaaaaatgaatcaaacattaaaatc 50475181  T
Q  118 aaaattaactttttc 132  Q
    |||||||| ||||||    
T  50475182 aaaattaaatttttc 50475196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 38591976 - 38592051
Alignment:
Q  32 caaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaa 107  Q
    |||| |||||||| |||||||| |  ||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  38591976 caagatgttgcaagcattattaaacaaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaa 38592051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 3655106 - 3654997
Alignment:
Q  26 taagttcaaggtgttgcaaacattattagat--gaattattattaatcatgaatcagtaatcaacaatttaaaaat-gaatcaaacattaagattaaaat 122  Q
    ||||| |||| |||||||| ||||| |||||  |||||| |||| || || |||||||||||||||||||||||||  ||||||||||||| || |||||    
T  3655106 taagtccaagatgttgcaagcattactagatatgaattactattgattattaatcagtaatcaacaatttaaaaataaaatcaaacattaaaatcaaaat 3655007  T
Q  123 taactttttc 132  Q
    |||| |||||    
T  3655006 taacattttc 3654997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 124
Target Start/End: Complemental strand, 27480246 - 27480164
Alignment:
Q  42 caaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    ||||||||| ||||||||||| |||| || || ||||||  |||||||||||||||||||||| ||||||||||  |||||||    
T  27480246 caaacattactagatgaattactattgattattaatcagcgatcaacaatttaaaaatgaatcgaacattaagaacaaaatta 27480164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 35844577 - 35844663
Alignment:
Q  84 tcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||       ||| |||| | ||||||||||| ||||||||    
T  35844577 tcaacaatttaaaaataaatcaaacattaaaattaaaattaactttttcaaaaaagtcaatttcataactgcaccgtaaaagctccc 35844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 34133312 - 34133373
Alignment:
Q  108 cattaagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctcc 169  Q
    |||||||||||||||||||||||||       |||||||||| |||||||| ||||||||||    
T  34133312 cattaagattaaaattaactttttcaaaaaagtcagtttcctaactgcaccttagaagctcc 34133373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 43348556 - 43348592
Alignment:
Q  96 aaatgaatcaaacattaagattaaaattaactttttc 132  Q
    ||||||||||| |||||||||||||||||||||||||    
T  43348556 aaatgaatcaatcattaagattaaaattaactttttc 43348592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 54828618 - 54828546
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatc 85  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||| ||||| |||| ||||| |||||||||||    
T  54828618 aaaatagtacatgtaagtccaagatgttgcaagcattactagataaattactattgatcattaatcagtaatc 54828546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 48353806 - 48353963
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | |||||| |||| | |||||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  48353806 aaaatagtatctgtaagtccaagatattgcaagcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 48353905  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||||||| ||||||||||||||||||||||    
T  48353906 agattaaaattaactttttcaaaaaaatcagtttcatgactgcaccgtagaagctccc 48353963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 46931673 - 46931831
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt 111  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  46931673 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaatatattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt 46931772  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    || || |||||||||||||||       |||||||||| ||||||||||||||||||||    
T  46931773 aaaatcaaaattaactttttcaaaaaagtcagtttccttactgcaccgtagaagctccc 46931831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 47279453 - 47279611
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | |||||| |||| |||||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  47279453 aaaatagtatctgtaagtccaagatgttgcaaacattattagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacatta 47279552  T
Q  113 agattaaaattaactttttc-nnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||        |||||||  ||||||||||||||||||||||    
T  47279553 agattaaaattaactttttcaaaaaaaatcagttttatgactgcaccgtagaagctccc 47279611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 2960012 - 2960169
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  2960012 aaaatagtatctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 2960111  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||||||       |||||||||||||||||||||||||| ||||    
T  2960112 aaatcaaaattaactttttcaaaaaaatcagtttcctgactgcaccgtagaagatccc 2960169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 27532893 - 27532737
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||| |||||||||||||||||||||    
T  27532893 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaa-ttaaaaatgaatcaaacatta 27532795  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||||||| ||||||||||||||||||||||    
T  27532794 agattaaaattaactttttcaaaaaaatcagtttcatgactgcaccgtagaagctccc 27532737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 32216331 - 32216476
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32216331 gtaagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaatta 32216430  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||        ||||||| |||||||||||||||||||||||    
T  32216431 acttttttaaaaaagtcagttttctgactgcaccgtagaagctccc 32216476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 15168360 - 15168515
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||||||||||||||| |||| ||||| |||||| ||||||||||||||||||||||| |||||||    
T  15168360 aaaatagtacatgtaagtacaagatgttgcaagcattattagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacatta 15168459  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctc 168  Q
    |||| |||||||||||||||       |||||||||| ||||||||||||||||||    
T  15168460 agatcaaaattaactttttcaaaaaaatcagtttcctaactgcaccgtagaagctc 15168515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 10922991 - 10923148
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | |||||| |||  |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  10922991 aaaatagtatctgtaagtccaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 10923090  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       ||||||| ||||||||||| |||||||||||    
T  10923091 agatcaaaattaactttttcaaaagagtcagttttctgactgcaccatagaagctccc 10923148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 11742280 - 11742123
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  11742280 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 11742181  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||||||| ||||||| || ||||| |||||    
T  11742180 agattaaaattaactttttcaaaaaaatcagtttcatgactgcgccatagaaactccc 11742123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 34012282 - 34012137
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    ||||||||||| |||||||| ||||| || |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||| || |||||||    
T  34012282 gtaagttcaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaatta 34012183  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||        |||||||||||||||||||||||||||||||    
T  34012182 acttttttaaaaaagtcagtttcctgactgcaccgtagaagctccc 34012137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 14758296 - 14758453
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||  ||||||||||||||||||||||| |||||||    
T  14758296 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcgaacatta 14758395  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       |||||||| ||||||||||||||||||||||    
T  14758396 agatcaaaattaactttttcaaaaaagtcagtttcgtgactgcaccgtagaagctccc 14758453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 32267298 - 32267455
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| ||| || |||| |||||||| ||||| ||||||||||| |||| | ||| ||||||||||||||||||||||||||||||||||||||    
T  32267298 aaaatagtacctgtaggtccaagatgttgcaagcattactagatgaattactattgaacattaatcagtaatcaacaatttaaaaatgaatcaaacatta 32267397  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||| ||||||       ||| |||||||||||||||||||||||||||    
T  32267398 aaatcaaaattaattttttcaaaaaagtcaatttcctgactgcaccgtagaagctccc 32267455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 37451549 - 37451706
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | |||||| |||| |||||||||||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  37451549 aaaatagtatctgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 37451648  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||||||       ||| |||| | |||||||||||||| |||||    
T  37451649 aaataaaaattaactttttcaaaaaagtcaatttcttcactgcaccgtagaatctccc 37451706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 238413 - 238306
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||| ||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  238413 gtaagtccaagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatccacaatttaaaaatgaatcaaacattaagattaaaatca 238314  T
Q  125 actttttc 132  Q
    ||||||||    
T  238313 actttttc 238306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 39393648 - 39393766
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||| | |||| |||||||||||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  39393648 aaaatagtaccggtaaatccaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaataaaacatta 39393747  T
Q  113 agattaaaattaacttttt 131  Q
    | |||||||||||||||||    
T  39393748 aaattaaaattaacttttt 39393766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 16415910 - 16416027
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  16415910 aaaatagtacatgtaagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 16416009  T
Q  113 agattaaaattaactttt 130  Q
    |||| |||||||| ||||    
T  16416010 agatcaaaattaattttt 16416027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 23999611 - 23999769
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt 111  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  23999611 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt 23999710  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    || || ||||||||||||||        ||| ||||||||||||||| |||||||||||    
T  23999711 aaaatcaaaattaacttttttaaaaaggtcaatttcctgactgcaccatagaagctccc 23999769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 3309417 - 3309537
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    |||||||||||||||||| |||| | |||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||     
T  3309417 aaaatagtacccgtaagtccaagatattgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattt 3309516  T
Q  113 aga-ttaaaattaactttttc 132  Q
    ||| |||||||||||||||||    
T  3309517 agatttaaaattaactttttc 3309537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 3535187 - 3535344
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    |||||||||||  ||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||  |||||||||||||||||||||||||||||||    
T  3535187 aaaatagtacctttaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcaaacatta 3535286  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||| |||||||||        |||||||| ||||| ||||||||||||||||    
T  3535287 agattaaaactaactttttaaaaaaaatcagtttcatgactacaccgtagaagctccc 3535344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 21289877 - 21289981
Alignment:
Q  26 taagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 125  Q
    ||||| |||| |||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21289877 taagtccaagatgttgcaaacattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaa 21289976  T
Q  126 ctttt 130  Q
     ||||    
T  21289977 ttttt 21289981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 1547535 - 1547654
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| |||||||||||  ||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  1547535 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattaccattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 1547634  T
Q  113 agattaaaattaactttttc 132  Q
    ||||||||||||| ||||||    
T  1547635 agattaaaattaattttttc 1547654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 28769917 - 28770036
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||||||||  ||||||||||| |||| ||||| ||| | ||||||||||||||||||||||||||||||||    
T  28769917 aaaatagtacctgtaagtccaagatgttgcaaacattgctagatgaattactattgatcattaattaataatcaacaatttaaaaatgaatcaaacatta 28770016  T
Q  113 agattaaaattaactttttc 132  Q
    | ||||||||||||||||||    
T  28770017 aaattaaaattaactttttc 28770036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 8222392 - 8222549
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatg-aatcaaacatt 111  Q
    ||||||||||  |||||| |||| |||||||| ||||| |||||||||||| ||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  8222392 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattat-attgatcattaatcagtaatcaacaatttaaaaatgaaatcaaacatt 8222490  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    || || |||||||||||||||       ||||||| ||||||| |||||||||||||||    
T  8222491 aaaatcaaaattaactttttcaaaaaagtcagttttctgactgtaccgtagaagctccc 8222549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 19899681 - 19899523
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt 111  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  19899681 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt 19899582  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    || || ||||||||||||| |       |||||||||| ||||||| ||||||||||||    
T  19899581 aaaatcaaaattaacttttccaaaaaagtcagtttcctaactgcactgtagaagctccc 19899523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 31962892 - 31963038
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaa-tttaaaaatgaatcaaacattaagattaaaatt 123  Q
    ||||||| ||| |||||||| |||||||||||||| || |||| ||||| |||| ||||||||||| ||||||||| |||||||||||||||||||||||    
T  31962892 gtaagtttaagatgttgcaagcattattagatgaactactattgatcattaatcggtaatcaacaattttaaaaataaatcaaacattaagattaaaatt 31962991  T
Q  124 aactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||||       |||||||| | ||||||||||||||||||||    
T  31962992 aactttttcaaaaaagtcagtttcataactgcaccgtagaagctccc 31963038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 47682406 - 47682249
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||| | |||| |||||||| ||||| || |||||||| |||| ||||| |||||||||| ||||||||||||| |||| ||||||||    
T  47682406 aaaatagtacctgtaaatccaagatgttgcaagcattactaaatgaattactattgatcattaatcagtaattaacaatttaaaaaagaattaaacatta 47682307  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||||||||||| |||       ||||||| ||||||||||| |||||||||||    
T  47682306 agattaaaattaacttgttcaaaaaagtcagtttactgactgcaccatagaagctccc 47682249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 27763223 - 27763071
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt 111  Q
    ||||||||| | ||||||||||| |||||||| ||||| ||||| ||| || |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  27763223 aaaatagtatctgtaagttcaagatgttgcaagcattactagataaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt 27763124  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaa 164  Q
    || || |||||||||||||||       ||| ||||||||||| |||||||||    
T  27763123 aaaatcaaaattaactttttcaaaaatgtcaatttcctgactgtaccgtagaa 27763071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 28564683 - 28564576
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||||||||| ||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||| || |||||||    
T  28564683 gtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaatta 28564584  T
Q  125 actttttc 132  Q
    ||||||||    
T  28564583 actttttc 28564576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 25 - 169
Target Start/End: Original strand, 30254699 - 30254843
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||| ||||| ||||||||||| |||| || || ||||| ||||||||||||||||||||||||||||||||| || |||||||    
T  30254699 gtaagtccaagatgttgcaagcattactagatgaattactattgattattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaatta 30254798  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctcc 169  Q
    |||||||        ||||||||||||||||||||||||| ||||    
T  30254799 acttttttaaaaaagtcagtttcctgactgcaccgtagaaactcc 30254843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 39 - 170
Target Start/End: Complemental strand, 7078949 - 7078818
Alignment:
Q  39 ttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnn 138  Q
    |||||||||||| ||||||||||| |||| ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||          
T  7078949 ttgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaaaa 7078850  T
Q  139 ntcagtttcctgactgcaccgtagaagctccc 170  Q
     |||||||| |||||| |||||| || |||||    
T  7078849 atcagtttcatgactgtaccgtaaaaactccc 7078818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 37 - 164
Target Start/End: Original strand, 38823502 - 38823629
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnn 136  Q
    |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||         
T  38823502 tgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaacaaatattaagattaaaattaacttttttaaaa 38823601  T
Q  137 nnntcagtttcctgactgcaccgtagaa 164  Q
       |||||||| ||||||||||||||||    
T  38823602 aagtcagtttcatgactgcaccgtagaa 38823629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 9902966 - 9902812
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| || ||||| || || ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| ||||    
T  9902966 aaaatagtaccagtaagtccaagatgctgcaagcactactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatatta 9902867  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagct 167  Q
    | || |||||||||||||||       |||  ||| |||||||||||||||||||    
T  9902866 aaatcaaaattaactttttcaaaaaagtcaaattcttgactgcaccgtagaagct 9902812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 15383197 - 15383355
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatg-aatcaaacatt 111  Q
    ||||||||||| |||| | |||| |||||||| ||||| ||||||||||| |||| || || |||||| ||||||||||||||||||| |||||||||||    
T  15383197 aaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagcaatcaacaatttaaaaatgaaatcaaacatt 15383296  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    || || |||||||||||||||       ||| ||||||||||| |||||||||||||||    
T  15383297 aaaatcaaaattaactttttcaaaaaaatcaatttcctgactgaaccgtagaagctccc 15383355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 22170999 - 22171132
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnn 136  Q
    |||||||||||||||||||| ||||| |||| ||||| ||| ||||||||||||||||||||| ||||||||||||| || |||||||||||||||        
T  22170999 tgttgcaaacattattagataaattactattgatcattaattagtaatcaacaatttaaaaataaatcaaacattaaaatcaaaattaactttttcaaaa 22171098  T
Q  137 nnntcagtttcctgactgcaccgtagaagctccc 170  Q
       ||||||| || | ||||||||||||||||||    
T  22171099 aaatcagttttctaattgcaccgtagaagctccc 22171132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 25 - 164
Target Start/End: Complemental strand, 27563805 - 27563666
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| ||||||||  |||| ||||||||||| |||| ||||| |||||||||||||||||||||||| ||||||||||||||||| | |||||    
T  27563805 gtaagtccaagatgttgcaagtattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaaagaatcaaacattaagatcataatta 27563706  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaa 164  Q
    |||||| |       ||||||||||||||||||| |||||    
T  27563705 acttttccaaaaaaatcagtttcctgactgcaccatagaa 27563666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 4330545 - 4330699
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||  |||||||| ||||| |||||||||||  ||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  4330545 aaaatagtacttgtaagtccaatatgttgcaagcattactagatgaattacaattgatcattaatcagtaatcaacaatataaaaatgaatcaaacatta 4330644  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagct 167  Q
    |||| |||||||| |||| |       ||||||  ||||||||||||||||||||    
T  4330645 agatcaaaattaatttttccaaaaaaatcagttgtctgactgcaccgtagaagct 4330699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 27227397 - 27227280
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||| |||||||||||||| ||||||||    
T  27227397 aaaatagtatctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaaccatttaaaaatgaattaaacatta 27227298  T
Q  113 agattaaaattaactttt 130  Q
    | || |||||||||||||    
T  27227297 atatcaaaattaactttt 27227280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 1359847 - 1359744
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| ||||||||||  |||||||| ||||| | ||||||||| |||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  1359847 aaaatagtacctgtaagttcaaaatgttgcaagcattactggatgaattactatcgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 1359748  T
Q  113 agat 116  Q
    ||||    
T  1359747 agat 1359744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 52 - 170
Target Start/End: Original strand, 15752332 - 15752450
Alignment:
Q  52 tagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtttcctga 151  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||        ||| ||| ||||    
T  15752332 tagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaattttttttaaaaaatcaattttctga 15752431  T
Q  152 ctgcaccgtagaagctccc 170  Q
    |||||||||||||||||||    
T  15752432 ctgcaccgtagaagctccc 15752450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 76 - 170
Target Start/End: Original strand, 48620916 - 48621010
Alignment:
Q  76 atcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||    
T  48620916 atcattaatcaacaattttaaaatgaatcaaacattaagattaaaattaactttttcagaaaagtcagtttcatgactgcaccgtagaagctccc 48621010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 37 - 170
Target Start/End: Complemental strand, 10181895 - 10181762
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnn 136  Q
    |||||||| ||||| ||||||||||| |||| | ||| |||||  ||||||||||||||||||||||||||||||||||| | ||||||||||| |        
T  10181895 tgttgcaagcattactagatgaattactattgaacattaatcaacaatcaacaatttaaaaatgaatcaaacattaagatcataattaacttttccaaaa 10181796  T
Q  137 nnntcagtttcctgactgcaccgtagaagctccc 170  Q
       | ||||||||||||||||| |||||||||||    
T  10181795 aagttagtttcctgactgcaccatagaagctccc 10181762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 51129123 - 51129240
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||  ||||    
T  51129123 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaagtatta 51129222  T
Q  113 agattaaaattaactttttc 132  Q
    | ||  ||||||||||||||    
T  51129223 aaat--aaattaactttttc 51129240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 25160896 - 25161015
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatg-aatcaaacatt 111  Q
    ||||||||||  |||||| |||| |||||||| ||||| || |||||||| |||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  25160896 aaaatagtacatgtaagtccaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaatcaaacatt 25160995  T
Q  112 aagattaaaattaacttttt 131  Q
    || || ||||||||| ||||    
T  25160996 aaaatcaaaattaacctttt 25161015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 27267112 - 27266995
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | ||||||  ||| |||||||| ||||| ||||||||||| |||| || || ||||| ||||||| ||||||||||||||| ||||||||    
T  27267112 aaaatagtatctgtaagtctaagatgttgcaagcattactagatgaattactattgataattaatcaataatcaataatttaaaaatgaattaaacatta 27267013  T
Q  113 agattaaaattaactttt 130  Q
    |||| |||||||||||||    
T  27267012 agatcaaaattaactttt 27266995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 31621461 - 31621341
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaattta-aaaatgaatcaaacatt 111  Q
    ||||||||||  ||||||||||  |||||||| ||||| |||||||| || |||| ||||| |||||  ||||||||||||| |||||||||| ||||||    
T  31621461 aaaatagtacatgtaagttcaatatgttgcaagcattagtagatgaactactattgatcattaatcatcaatcaacaatttaaaaaatgaatcgaacatt 31621362  T
Q  112 aagattaaaattaactttttc 132  Q
    ||||| |||||||||||||||    
T  31621361 aagatcaaaattaactttttc 31621341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 30326851 - 30326751
Alignment:
Q  26 taagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatg-aatcaaacattaagattaaaatta 124  Q
    ||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||| ||||||| ||||| || |||||||    
T  30326851 taagtccaagatgttgcaagcattactagatgaattactattgatcatcaatcagtaatcaacaatttaaaaatgaaatcaaatattaaaatcaaaatta 30326752  T
Q  125 a 125  Q
    |    
T  30326751 a 30326751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 42721312 - 42721418
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| ||||||||  |||| ||||| ||||| |||| ||||| ||| ||||||||| ||||||||||||||||||||||||| || | |||||    
T  42721312 gtaagtccaagatgttgcaattattactagattaattactattgatcattaatgagtaatcaataatttaaaaatgaatcaaacattaaaatcataatta 42721411  T
Q  125 acttttt 131  Q
    |||||||    
T  42721412 acttttt 42721418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 40885077 - 40885185
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||||||||| ||||||||||| |||| ||||| ||| || |||||| |||| ||||||||||| || ||||    
T  40885077 aaaatagtacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaattagcaatcaataattcaaaaatgaatcgaatatta 40885176  T
Q  113 agattaaaa 121  Q
    || ||||||    
T  40885177 aggttaaaa 40885185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 33725478 - 33725366
Alignment:
Q  59 attattattaatcatgaatcagtaatcaacaatttaaaaa-tgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtttcctgactgcac 157  Q
    |||| |||| ||||| |||||| ||||||||||| ||||| |||||| ||||||||||| ||||| |||||||||       |||||||||||||||||     
T  33725478 attactattgatcattaatcagcaatcaacaattaaaaaaatgaatcgaacattaagatcaaaataaactttttcaaaaaaatcagtttcctgactgcaa 33725379  T
Q  158 cgtagaagctccc 170  Q
    |||| ||||||||    
T  33725378 cgtataagctccc 33725366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 37618801 - 37618729
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaa 97  Q
    |||||| |||| |||||||| ||||| ||||||||||| |||| | ||| ||||| |||||||||||||||||    
T  37618801 gtaagtccaagatgttgcaagcattactagatgaattagtattgaccattaatcaataatcaacaatttaaaa 37618729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 41926421 - 41926537
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| | || ||| ||||| ||||||||||| |||| ||||| ||| | |||||||  |||||||| ||||||||||||||    
T  41926421 aaaatagtacttgtaagtccaagatatt-caagcattactagatgaattactattgatcattaattaataatcaatgatttaaaattgaatcaaacatta 41926519  T
Q  113 agattaaaattaactttt 130  Q
    | || | |||||| ||||    
T  41926520 aaatcataattaattttt 41926537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 111
Target Start/End: Original strand, 18422927 - 18423006
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt 111  Q
    |||||| |||| |||||||| ||||  ||||||||||| |||| |||||       |||||||||||||||||||||||||||||||    
T  18422927 gtaagtccaagatgttgcaagcattgctagatgaattactattgatcat-------taatcaacaatttaaaaatgaatcaaacatt 18423006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 8e-46; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 7703777 - 7703931
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| ||||||  ||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  7703777 aaaatagtacctgtaagtcgaagatgttgcaagcattactagatgaattactatttatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 7703876  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagct 167  Q
    ||||||||||||||||||||       |||||||| |||||||||||||||||||    
T  7703877 agattaaaattaactttttcaaaaaagtcagtttcatgactgcaccgtagaagct 7703931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 34361435 - 34361277
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt 111  Q
    |||||||||||  ||||| |||| |||||||| ||||| ||||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  34361435 aaaatagtacctataagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt 34361336  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    || || |||||||||||||||       |||||||||||||||||||||||||||||||    
T  34361335 aaaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 34361277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 879491 - 879334
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| ||||| |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  879491 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattattattgatcattaataagtaatcaacaatttaaaaatgaatcaaacatta 879392  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| ||||||||||||||        ||||||| |||||| |||| |||||||||||    
T  879391 agatcaaaattaactttttttaaaaagtcagttttctgactacaccatagaagctccc 879334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 6864315 - 6864460
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    ||||||||||| |||||||| ||||| ||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||| || |||||||    
T  6864315 gtaagttcaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaaatcaaaatta 6864414  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||       ||||||| |||||||||||||||||||||||    
T  6864415 actttttcaaaaaagtcagttttctgactgcaccgtagaagctccc 6864460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 19440591 - 19440434
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||| ||||||||||| ||||||||||||    
T  19440591 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaataatttaaaaattaatcaaacatta 19440492  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| ||||||||||||||        |||||||||||||||||||||||||||||||    
T  19440491 agatcaaaattaacttttttaaaaaagtcagtttcctgactgcaccgtagaagctccc 19440434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 25184381 - 25184538
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||||||||||    
T  25184381 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcgacaatttaaaaatgaatcaaacatta 25184480  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       ||||||| ||||||||||| |||||||||||    
T  25184481 agatcaaaattaactttttcaaaaaagtcagttttctgactgcaccatagaagctccc 25184538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 33816447 - 33816302
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||||||||| ||||||||||| |||| ||||| |||||| ||||||||||||||||||||||| ||||||||||| |||||||    
T  33816447 gtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacattaagatcaaaatta 33816348  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||       ||||||||||||||||| |||||||||||||    
T  33816347 actttttcaaaaaagtcagtttcctgactgcatcgtagaagctccc 33816302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 55241048 - 55240891
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||||||||| ||||| ||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  55241048 aaaatagtacatgtaagtccaagatgttgcaaacattactagataaattactattaatcattaatcaataatcaacaatttaaaaatgaatcaaacatta 55240949  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||| ||||||       |||||||| | ||||||||||||||| ||||    
T  55240948 agattaaaattaaatttttcaaaaaagtcagtttcataactgcaccgtagaagttccc 55240891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 23431826 - 23431980
Alignment:
Q  16 atagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaaga 115  Q
    |||||||| |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||| |||||||||||||||||||||| |||||||||||| |    
T  23431826 atagtacctgtaagtccaagatgttgcaagcattagtagatgaattactattgatcattaattagtaatcaacaatttaaaaatgcatcaaacattaaaa 23431925  T
Q  116 ttaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||||||||||||       |||||||| ||||||||| ||||||||||||    
T  23431926 ttaaaattaactttttcaaaaaagtcagtttcatgactgcactgtagaagctccc 23431980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 4205252 - 4205409
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||| | ||||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  4205252 aaaatagtacatgtaagtccaagatgttgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaatgaatcaaacatta 4205351  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | ||||||| ||||||||||       |||||||| ||||||||||||||||||||||    
T  4205352 aaattaaaagtaactttttcaaaaaagtcagtttcttgactgcaccgtagaagctccc 4205409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 17272232 - 17272389
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||| ||||| ||| |||||||||||||||||||||||    
T  17272232 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcggtaatgaacgatttaaaaatgaatcaaacatta 17272331  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       ||| |||| ||||||||||||||||||||||    
T  17272332 agattaaaattaactttttcaaataagtcaatttcatgactgcaccgtagaagctccc 17272389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 19089396 - 19089239
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| | |||    
T  19089396 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgtta 19089297  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||| ||       ||| |||||||||||||||||||||||||||    
T  19089296 aaatcaaaattaactttatcaaaaaagtcaatttcctgactgcaccgtagaagctccc 19089239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 23761339 - 23761496
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||| |||||  ||||| |||| |||||||| ||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||    
T  23761339 aaaattgtacctataagtccaagatgttgcaagcattactagatgaattattattgatcattaatcagtaatcaataatttaaaaatgaatcaaacatta 23761438  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||||||| ||||| ||||| | ||||||||    
T  23761439 agattaaaattaactttttcaaaaaagtcagtttcatgactacaccgaataagctccc 23761496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 29584131 - 29583986
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  29584131 gtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatgaacgatttaaaaatgaatcaaacattaagattaaaatta 29584032  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||       ||| |||| ||||||||||||||||||||||    
T  29584031 actttttcaaacaagtcaatttcatgactgcaccgtagaagctccc 29583986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 37775926 - 37776082
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  37775926 aaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 37776025  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctcc 169  Q
    ||||| |||||||||||||        ||| |||| |||||||||||||||||||||    
T  37776026 agattgaaattaacttttttaaaaaagtcaatttcatgactgcaccgtagaagctcc 37776082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 1815569 - 1815687
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||| | |||| |||||||||||||| |||||||||||  ||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  1815569 aaaatagtacctgtaaatccaagatgttgcaaacattactagatgaattacaattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 1815668  T
Q  113 agattaaaattaacttttt 131  Q
    |||| ||||||||||||||    
T  1815669 agatcaaaattaacttttt 1815687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 13 - 164
Target Start/End: Original strand, 39400276 - 39400427
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||| |||||  |||||||||| |||||||| ||||| ||||||||| | |||| ||||| |||||| |||||||||||||||||||||||||||||||    
T  39400276 aaaatggtacctttaagttcaagatgttgcaagcattactagatgaatgactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacatta 39400375  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaa 164  Q
    ||||||||||||||||||||       |||||||| |||||| |||||||||    
T  39400376 agattaaaattaactttttcaaaaaagtcagtttcatgactggaccgtagaa 39400427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 50764988 - 50765106
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  50764988 aaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 50765087  T
Q  113 agattaaaattaacttttt 131  Q
    |||||||||||||||||||    
T  50765088 agattaaaattaacttttt 50765106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 4598269 - 4598407
Alignment:
Q  32 caaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 131  Q
    |||| |||||||| ||||||||||| ||||| |||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4598269 caagatgttgcaagcattattagattaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacatttt 4598368  T
Q  132 cnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
            |||||||| ||||||||||||||||||||||    
T  4598369 acaaaaagtcagtttcatgactgcaccgtagaagctccc 4598407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 32912523 - 32912365
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt 111  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  32912523 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt 32912424  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    || || ||||| || ||||||       |||||||||||||||||||||| ||||||||    
T  32912423 aaaatcaaaatgaattttttcaaaaaagtcagtttcctgactgcaccgtaaaagctccc 32912365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 37287996 - 37288154
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||||||||||||||| |||| | ||| ||||||||||||| ||||||||||||||||||||||||    
T  37287996 aaaatagtacatgtaagtccaagatgttgcaagcattattagatgaattactattgagcattaatcagtaatcaataatttaaaaatgaatcaaacatta 37288095  T
Q  113 aga-ttaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||| |||||||||||||||||       ||| |||| |||||||||||| |||||||||    
T  37288096 agatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgtggaagctccc 37288154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 28002929 - 28002772
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||| ||||||| ||||||||||| |||| ||||| |||||  ||||||||||||||||||||||| |||||||    
T  28002929 aaaatagtacatgtaagtccaagatgttgctaacattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcgaacatta 28002830  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       |||||||||||||||||  ||||||||||||    
T  28002829 agatcaaaattaactttttcaaaaaagtcagtttcctgactgcagtgtagaagctccc 28002772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 37 - 170
Target Start/End: Complemental strand, 30002560 - 30002427
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnn 136  Q
    |||||||| ||||| ||||||||||| |||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||        
T  30002560 tgttgcaagcattactagatgaattactattgatcattaatcagtaataaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcagaa 30002461  T
Q  137 nnntcagtttcctgactgcaccgtagaagctccc 170  Q
       ||| |||| | ||||||||||||||||||||    
T  30002460 aagtcaatttcataactgcaccgtagaagctccc 30002427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 32579714 - 32579871
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||||||||| ||||||||||| |||| ||||| |||||| |||||||||||||||||| ||||||||||||    
T  32579714 aaaatagtacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaataaatcaaacatta 32579813  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||| ||||||       ||||||| || |||||||||||||| |||||    
T  32579814 agatcaaaattaattttttcaaaaaagtcagttttctaactgcaccgtagaaactccc 32579871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 47254032 - 47254165
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnn 136  Q
    |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        
T  47254032 tgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaagattaaaattaactttttcaaaa 47254131  T
Q  137 nnntcagtttcctgactgcaccgtagaagctccc 170  Q
       |||||||  ||||| ||||||||||||||||    
T  47254132 aagtcagtttgatgactccaccgtagaagctccc 47254165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 49376235 - 49376392
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| ||||  |||| || ||||| || |||||||| |||| ||||| ||||||||||||| ||||||||||||||| ||||||||    
T  49376235 aaaatagtacatgtaagtccaagaagttgaaagcattactaaatgaattactattgatcattaatcagtaatcaagaatttaaaaatgaattaaacatta 49376334  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       |||||||||||||||||||||||||||||||    
T  49376335 agatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 49376392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 3042887 - 3043043
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||  |||||||| ||||| ||||||||||| |||| || || ||||||||||||||||||||||||||||||||||||||    
T  3042887 aaaatagtacatgtaagtccaacatgttgcaagcattactagatgaattagtattgattattaatcagtaatcaacaatttaaaaatgaatcaaacatta 3042986  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctcc 169  Q
    | || |||||||||||||||       ||| |||| |||||||||||||||||||||    
T  3042987 aaatcaaaattaactttttcaaaaaagtcaatttcttgactgcaccgtagaagctcc 3043043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 7152147 - 7152028
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| | |||||| ||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  7152147 aaaatagtacctgtaagtccaagattttgcaagcattattagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacatta 7152048  T
Q  113 agattaaaattaactttttc 132  Q
    |||| |||| ||||||||||    
T  7152047 agatgaaaaataactttttc 7152028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 32592352 - 32592471
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| ||||||||||| ||||| || ||||| || |||||||| |||| ||| | ||||| ||||||||||||||||||||||||||||||||    
T  32592352 aaaatagtacctgtaagttcaagatgttgaaagcattactaaatgaattactattgatcgttaatcaataatcaacaatttaaaaatgaatcaaacatta 32592451  T
Q  113 agattaaaattaactttttc 132  Q
    ||||||||||||||||||||    
T  32592452 agattaaaattaactttttc 32592471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 33341666 - 33341784
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| ||||| || ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  33341666 aaaatagtacatgtaagtccaagatgttgtaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 33341765  T
Q  113 agattaaaattaacttttt 131  Q
    ||||||||||||| |||||    
T  33341766 agattaaaattaatttttt 33341784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 46888101 - 46887946
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||| | |||| |||| ||| ||||| ||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||| ||||    
T  46888101 aaaatagtacctgtaaatccaagatgttacaagcattactagatgaattactattgatcattaatcactaatcaacaatttaaaaatgaatcaaatatta 46888002  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctc 168  Q
    | || |||||||||||||||       |||||||||||| ||||||||||||||||    
T  46888001 aaatcaaaattaactttttcaaaaaagtcagtttcctgattgcaccgtagaagctc 46887946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 37663684 - 37663527
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| | |||    
T  37663684 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgtta 37663585  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||| |        ||| ||||||||||| |||||||||||||||    
T  37663584 aaatcaaaattaactttattaaaaaagtcaatttcctgactgtaccgtagaagctccc 37663527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 55477834 - 55477716
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||   ||||| |||| |||||||| ||||| ||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||    
T  55477834 aaaatagtacatttaagtccaagatgttgcaagcattactagatgaattactattaatcattaatcagtaattaacaatttaaaaatgaatcaaacatta 55477735  T
Q  113 agattaaaattaacttttt 131  Q
    |||| |||||||| |||||    
T  55477734 agatcaaaattaatttttt 55477716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 17173558 - 17173715
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| |||||||| ||| | ||||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  17173558 aaaatagtacatgtaagtctaagatgttgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaatgaatcaaacatta 17173657  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | ||||||| ||| ||||||       |||||||| |||||||||||||||| |||||    
T  17173658 aaattaaaagtaattttttcaaaaaagtcagtttcttgactgcaccgtagaaactccc 17173715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 34948026 - 34947923
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||| ||||| |||||||| || |||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34948026 gtaagtccaagatgttgcaagcattactagatgaaatactattgatcgttaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 34947927  T
Q  125 actt 128  Q
    ||||    
T  34947926 actt 34947923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 35020978 - 35020817
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattat----taatcatgaatcagtaatcaacaatttaaaaatgaatcaaac 108  Q
    ||||||||| | |||||| |||| | |||||||||||| ||||||||||| |||    | ||||| |||| |||||||||||||||||||||||||||||    
T  35020978 aaaatagtatctgtaagtccaagatattgcaaacattactagatgaattactatatattgatcattaatcggtaatcaacaatttaaaaatgaatcaaac 35020879  T
Q  109 attaagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||| ||||||||||||||        ||||||| |||||| ||||||||||||||||    
T  35020878 attaagatcaaaattaacttttttaaaagagtcagttttctgactacaccgtagaagctccc 35020817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 35025509 - 35025391
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||| |||||||||||||||||||||||||||||||    
T  35025509 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacatta 35025410  T
Q  113 agattaaaattaactttttc 132  Q
    | || |||||||||||||||    
T  35025409 a-atcaaaattaactttttc 35025391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 26896379 - 26896513
Alignment:
Q  37 tgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnn 135  Q
    |||||||||||||| ||||||||| || |||| ||||| |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||        
T  26896379 tgttgcaaacattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcgaacattaaaatcaaaattaacttttttaaa 26896478  T
Q  136 nnnntcagtttcctgactgcaccgtagaagctccc 170  Q
        ||| |||||||||||||||||||||| ||||    
T  26896479 aaagtcaatttcctgactgcaccgtagaagttccc 26896513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 25700999 - 25700842
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| |||||| |  ||| | |||||| |||| |||||||||||| |||| ||||| ||||| ||||  ||||||||||||||||||||||||||    
T  25700999 aaaatagtatccgtaaatctaagattttgcaagcattgttagatgaattactattgatcattaatcaataatgtacaatttaaaaatgaatcaaacatta 25700900  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       ||| |||||| |||||||||||||| |||||    
T  25700899 agatcaaaattaactttttcaaaaaagtcaatttcctaactgcaccgtagaaactccc 25700842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 36493632 - 36493475
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | ||||||  ||| | |||||| ||||| | ||||||||| |||| ||||| |||| ||||| |||||||||||||||||||||||||||    
T  36493632 aaaatagtatctgtaagtctaagatattgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatcaaacatta 36493533  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| | |||||||||||||       ||| ||||||||||||||| |||||||||||    
T  36493532 agatcataattaactttttcaaaaaagtcaatttcctgactgcaccatagaagctccc 36493475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 27396908 - 27397000
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 131  Q
    |||||||| ||||| ||||||||||| |||| ||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27396908 tgttgcaagcattactagatgaattactattgatcattaat--gtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 27397000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 50697510 - 50697629
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||| | |||| ||||| || ||||| ||||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  50697510 aaaatagtacctgtaattccaagatgttgtaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacatta 50697609  T
Q  113 agattaaaattaactttttc 132  Q
    | || |||||||| ||||||    
T  50697610 aaataaaaattaattttttc 50697629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 17167981 - 17168138
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| |||||||| ||| | ||||||||||| |||| ||||| ||| ||||||||| ||||||||||||||||||||||||    
T  17167981 aaaatagtacatgtaagtctaagatgttgcaagcatcactagatgaattactatttatcattaattagtaatcaataatttaaaaatgaatcaaacatta 17168080  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | ||||||| ||| ||||||       |||||||| | |||||||||||||| |||||    
T  17168081 aaattaaaagtaattttttcaaaaaagtcagtttctttactgcaccgtagaaactccc 17168138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 132
Target Start/End: Complemental strand, 46884033 - 46883938
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttc 132  Q
    |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||| ||||||||||||| || |||||||| ||||||    
T  46884033 tgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaaaataaaaattaattttttc 46883938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 52 - 170
Target Start/End: Original strand, 38012569 - 38012687
Alignment:
Q  52 tagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtttcctga 151  Q
    ||||||||||| |||| ||||| |||||| |||||||||||||||||| |||| ||||||||||| |||||||||||||||       | ||||||||||    
T  38012569 tagatgaattactattgatcattaatcagcaatcaacaatttaaaaataaatcgaacattaagatcaaaattaactttttcaaaaaaattagtttcctga 38012668  T
Q  152 ctgcaccgtagaagctccc 170  Q
    |||||| ||| ||||||||    
T  38012669 ctgcactgtaaaagctccc 38012687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 5047909 - 5047752
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| ||||||||   ||| ||||| |||||||||| ||||  |||||  ||| ||||||||||||||||||| |||||||    
T  5047909 aaaatagtacatgtaagtccaagatgttgcaagttttactagataaattattattgatcagtaatcaacaataaacaatttaaaaatgaatcgaacatta 5047810  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||| ||||||       || ||||||||||||||||||| ||||||||    
T  5047809 aaatcaaaattaattttttcaaaaaagtctgtttcctgactgcaccgtaaaagctccc 5047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 9139509 - 9139612
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||| ||||| |||| |||||| |||| ||||| ||||| ||||| |  ||||||||||||||||||||||||||| | |||||    
T  9139509 gtaagtccaagatgttgcaagcattactagacgaattactattgatcattaatcaataatcta--atttaaaaatgaatcaaacattaagatcataatta 9139606  T
Q  125 actttt 130  Q
    ||||||    
T  9139607 actttt 9139612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 42200010 - 42200155
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatt 123  Q
    |||||| |||| |||||||| ||||| ||||||||| || || |  |||| ||||||||||||| ||||||||||| |||||||||| || | | |||||    
T  42200010 gtaagtccaagatgttgcaagcattactagatgaatatactactgttcattaatcagtaatcaataatttaaaaattaatcaaacatcaa-aatcaaatt 42200108  T
Q  124 aactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||||       ||| |||||||| ||||||||||||||||||    
T  42200109 aactttttcaaaaaggtcaatttcctgattgcaccgtagaagctccc 42200155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 128
Target Start/End: Complemental strand, 4934132 - 4934040
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaa-tttaaaaatgaatcaaacattaagattaaaattaactt 128  Q
    |||||||  ||||| ||||||||||  |||||||||| ||||||||||||| || ||||||||| ||| |||||||||||| |||||||||||    
T  4934132 tgttgcacgcattaatagatgaatttctattaatcattaatcagtaatcaaaaattttaaaaataaattaaacattaagatcaaaattaactt 4934040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 5299869 - 5299712
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  5299869 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaattaaacatta 5299770  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||||||| |||||||||| |||||||||||    
T  5299769 agattaaaattaactttttcaaaaaagtcagtttcatgactgcaccatagaagctccc 5299712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 16446798 - 16446641
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  16446798 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatctaacatta 16446699  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||||||       |||||||||||||||||||||||||||||||    
T  16446698 aaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 16446641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 35859201 - 35859358
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||||| || |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  35859201 aaaatagtacttgtaagttcgagatgttgcaagcattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 35859300  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||||||       ||||||||||||||||||||||||| |||||    
T  35859301 aaatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaaactccc 35859358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 466099 - 466253
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    |||||| |||| ||||||  ||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  466099 aaaataatacctgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 466198  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagct 167  Q
    |||||||||||||||| |||       |||||||| |||||||||||||||||||    
T  466199 agattaaaattaacttattcaaaaaaatcagtttcatgactgcaccgtagaagct 466253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 1149555 - 1149398
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||| |||||||||||||||||||||||||||||||||    
T  1149555 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcggtaatcaacaatttaaaaatgaatcaaacatta 1149456  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||| ||||||       ||| |||||||||||||||||||||||||||    
T  1149455 aaatcaaaattaattttttcaaaaaagtcaatttcctgactgcaccgtagaagctccc 1149398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 37970442 - 37970285
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||||| | || ||||| |||||| |||||||||||||||||||||||||||||||    
T  37970442 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactgttgatcattaatcagaaatcaacaatttaaaaatgaatcaaacatta 37970343  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       ||| ||||||||||||||| |||||||||||    
T  37970342 agatcaaaattaactttttcaaaaaagtcactttcctgactgcaccatagaagctccc 37970285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 38644245 - 38644402
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||| ||||||||||| ||||||||||||    
T  38644245 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaaaaatttaaaaataaatcaaacatta 38644344  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||||||| ||||||||||||| ||||||||    
T  38644345 agattaaaattaactttttcaaaaaagtcagtttcatgactgcaccgtaaaagctccc 38644402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 43643518 - 43643361
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||||||||||    
T  43643518 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcgacaatttaaaaatgaatcaaacatta 43643419  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       ||||||| ||||||||||| |||||||||||    
T  43643418 agatcaaaattaactttttcaaaaaagtcagttttctgactgcaccatagaagctccc 43643361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 34895229 - 34895386
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||||||| |||||||| ||||| || |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  34895229 aaaatagtacatgtaagttcaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 34895328  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || ||||||||||||||        ||| |||||| ||||||||||||||||||||    
T  34895329 aaatcaaaattaacttttttaaaaaagtcaatttcctaactgcaccgtagaagctccc 34895386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 23854354 - 23854235
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||| |||||||||||||||||||||||||||||||    
T  23854354 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacatta 23854255  T
Q  113 agattaaaattaactttttc 132  Q
    |||| |||||||||||||||    
T  23854254 agatcaaaattaactttttc 23854235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 1953911 - 1953760
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||| | |||| | |||||| ||||||||||||||||| |||| ||||| ||||| ||||||||||||| ||||||||||||||||||    
T  1953911 aaaatagtacctgtaaatccaagattttgcaagcattattagatgaattactattgatcattaatcaataatcaacaattttaaaatgaatcaaacatta 1953812  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaa 164  Q
    |||| |||||||| ||||||       |||||||||||||||||||||||||    
T  1953811 agatcaaaattaattttttcaaaaaaatcagtttcctgactgcaccgtagaa 1953760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 37 - 170
Target Start/End: Complemental strand, 7890856 - 7890723
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnn 136  Q
    |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||        
T  7890856 tgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaattaactttttcaaaa 7890757  T
Q  137 nnntcagtttcctgactgcaccgtagaagctccc 170  Q
       |||||||| |||| |||||||||||||||||    
T  7890756 aagtcagtttcatgaccgcaccgtagaagctccc 7890723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 35459634 - 35459515
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | |||||| |||  |||||||||||||| ||||||||||| |||| ||||| |||||| |||||||||||||||||||||||||||||||    
T  35459634 aaaatagtatctgtaagtccaaaatgttgcaaacattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacatta 35459535  T
Q  113 agattaaaattaactttttc 132  Q
    |||| |||||||||||||||    
T  35459534 agatcaaaattaactttttc 35459515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 24823317 - 24823199
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| ||||  |||| ||||||||||||||||||||||||| ||||||||||||    
T  24823317 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaataaatcaaacatta 24823218  T
Q  113 agattaaaattaacttttt 131  Q
    |||||||||||||||||||    
T  24823217 agattaaaattaacttttt 24823199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 34951980 - 34951826
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| ||||||||   ||| || |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  34951980 aaaatagtacatgtaagtctaagatgttgcaagtcttactacatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 34951881  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagct 167  Q
    ||||||||||||||||||||       |||||||| ||| |||||||||||||||    
T  34951880 agattaaaattaactttttcagaaaagtcagtttcatgattgcaccgtagaagct 34951826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 4132609 - 4132452
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||  |||||||||||||||||||||||| | ||||||    
T  4132609 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatttgtaatcaacaatttaaaaatgaattacacatta 4132510  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| ||||||||||||| |       ||||||| ||||||||||| |||||||||||    
T  4132509 agatcaaaattaacttttccaaaaaagtcagtttgctgactgcaccatagaagctccc 4132452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 44869764 - 44869883
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    |||||||||||  ||||| |||| | |||||| ||||| ||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||||||    
T  44869764 aaaatagtaccgataagtccaagatattgcaagcattactagatgaattactattgatcattaatcagtaaccaacaatttaaaaatgaatcaaacatta 44869863  T
Q  113 agattaaaattaactttttc 132  Q
    | ||||||||||||||||||    
T  44869864 aaattaaaattaactttttc 44869883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 30654506 - 30654349
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt 111  Q
    ||||||||||| |||||| |||| |||||||| ||||| || |||||| ||||||| ||||| |||||||||| |||||||||||| ||||||||| |||    
T  30654506 aaaatagtacctgtaagtccaagatgttgcaagcattactaaatgaatatattattgatcattaatcagtaattaacaatttaaaa-tgaatcaaatatt 30654408  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    || || |||||||||||||||       ||||||||||||||||||||||||| |||||    
T  30654407 aaaatcaaaattaactttttcaaaaaaatcagtttcctgactgcaccgtagaaactccc 30654349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 40 - 169
Target Start/End: Original strand, 41362716 - 41362845
Alignment:
Q  40 tgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnnn 139  Q
    |||||| |||| ||||||||||| |||| ||||| || |||||||||||||||||||||||||| |||||||||||| |||||||| ||||||           
T  41362716 tgcaaaaattactagatgaattactattgatcattaaccagtaatcaacaatttaaaaatgaattaaacattaagatcaaaattaattttttcaaaaaag 41362815  T
Q  140 tcagtttcctgactgcaccgtagaagctcc 169  Q
    ||||||||||||||||||| ||||||||||    
T  41362816 tcagtttcctgactgcaccatagaagctcc 41362845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 43025971 - 43026059
Alignment:
Q  43 aaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 131  Q
    |||||||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43025971 aaacattattagataaattactattgatcatgaatcagtgatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttt 43026059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 12587849 - 12587968
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| ||||||  ||| | |||||| ||||| ||||||||||| |||| ||||| |||||||||| |||||||||||||||||||||||||||    
T  12587849 aaaatagtacctgtaagtcaaagattttgcaagcattactagatgaattactattgatcattaatcagtaattaacaatttaaaaatgaatcaaacatta 12587948  T
Q  113 agattaaaattaactttttc 132  Q
    |||| |||||||| ||||||    
T  12587949 agatcaaaattaattttttc 12587968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 27082761 - 27082642
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| || | ||||| ||||| ||||||||||||||||||||||| ||||||||    
T  27082761 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactacttatcattaatcaataatcaacaatttaaaaatgaattaaacatta 27082662  T
Q  113 agattaaaattaactttttc 132  Q
    |||| |||||||||||||||    
T  27082661 agatcaaaattaactttttc 27082642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 31933809 - 31933653
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| | ||||| |||||| |||||||||||||||| ||||| |||||||||||||| |||||||||||||||||| ||||    
T  31933809 aaaatagtacttgtaagtctaagatattgcagacattactagatgaattattattgatcattaatcagtaatcaacgatttaaaaatgaatcaaatatta 31933710  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctcc 169  Q
    |||| |||||||| ||||||       |||||||||  |||||||| ||||||||||    
T  31933709 agatcaaaattaattttttcaaaaaagtcagtttcccaactgcaccatagaagctcc 31933653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 11727315 - 11727409
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 131  Q
    |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  11727315 tgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaattattaagattaaaattaacttttt 11727409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 16223130 - 16223248
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  16223130 aaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 16223229  T
Q  113 agattaaaattaacttttt 131  Q
    | || |||||||| |||||    
T  16223230 aaatcaaaattaatttttt 16223248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 8803740 - 8803582
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt 111  Q
    ||||||||||  |||||| |||| |||||||| |||||  |||||||| || |||| ||||| |||||||||| ||||||||||||||||||||||||||    
T  8803740 aaaatagtacatgtaagtccaagatgttgcaagcattaccagatgaatatactattgatcattaatcagtaatgaacaatttaaaaatgaatcaaacatt 8803641  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    || || |||||||||||||||       ||| |||||||||||||||||| || |||||    
T  8803640 aaaatcaaaattaactttttcaaaaaagtcaatttcctgactgcaccgtaaaaactccc 8803582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 1205194 - 1205351
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| ||||||||  |||| ||||||||||| |||| ||||| ||||| |||||| ||||||||||||||||||||||  |    
T  1205194 aaaatagtacctgtaagtccaagatgttgcaagtattactagatgaattactattgatcattaatcactaatcagcaatttaaaaatgaatcaaacaaca 1205293  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| ||||||||||||||        ||| ||| |||||| ||||||||||||||||    
T  1205294 agatcaaaattaacttttttaaaaaagtcaattttctgactacaccgtagaagctccc 1205351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 33198093 - 33198226
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnn 136  Q
    |||||||| ||| | ||||||||||| |||| ||||| ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||        
T  33198093 tgttgcaagcatcactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaatcattaagattaagattaactttttcaaaa 33198192  T
Q  137 nnntcagtttcctgactgcaccgtagaagctccc 170  Q
       ||| |||| ||| ||||||||||||||||||    
T  33198193 aagtcaatttcatgattgcaccgtagaagctccc 33198226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 36694889 - 36694732
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||| | |||| |||||||| ||| | ||||||||||| |||| ||||||||| ||||||||| ||||||||||| ||||||||||||    
T  36694889 aaaatagtacatgtaaatccaagatgttgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaataaatcaaacatta 36694790  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | ||||||| ||||||||||       |||||||| | |||||| |||||||||||||    
T  36694789 aaattaaaagtaactttttcaaaaaaatcagtttcttcactgcatcgtagaagctccc 36694732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 40862686 - 40862806
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaattt-aaaaatgaatcaaacatt 111  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| ||||  |||| ||||||||||| ||||||| ||||||||||||||||||    
T  40862686 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactatttgtcataaatcagtaatcgacaatttaaaaaatgaatcaaacatt 40862785  T
Q  112 aagattaaaattaactttttc 132  Q
    |||||||||| ||||||||||    
T  40862786 aagattaaaagtaactttttc 40862806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 6098434 - 6098320
Alignment:
Q  15 aatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaag 114  Q
    ||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  6098434 aatagtacttgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaag 6098335  T
Q  115 attaaaattaacttt 129  Q
    || |  |||||||||    
T  6098334 atcatgattaacttt 6098320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 9864415 - 9864509
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaa 107  Q
    ||||||||||| ||||||||||| |||||||| ||||| ||||||||| | || |||||||||||| ||||||||||||||||||||||||||||    
T  9864415 aaaatagtacctgtaagttcaagatgttgcaagcattactagatgaataactagtaatcatgaatcggtaatcaacaatttaaaaatgaatcaaa 9864509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 33906479 - 33906634
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||| |||||  |||||||||||||||| || | ||    
T  33906479 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagcaatca--aatttaaaaatgaatcgaatagta 33906576  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       ||||||| |||||||||| ||||||||||||    
T  33906577 agatcaaaattaactttttcaaaaaagtcagttttctgactgcactgtagaagctccc 33906634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 18259346 - 18259465
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| |||||||| ||||| ||||||||||||| || ||||  ||| |||||||||||||||||||||||||||| |||||    
T  18259346 aaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattattgttgatcagtaatgagtaatcaacaatttaaaaatgaatcaatcatta 18259445  T
Q  113 agattaaaattaactttttc 132  Q
    | |||||||||||| |||||    
T  18259446 aaattaaaattaaccttttc 18259465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 12876377 - 12876495
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||| ||  ||||| ||||||||||| |||| ||||||||| ||||||||||| ||| ||||| ||||||||||||    
T  12876377 aaaatagtacatgtaagtccaagatgttacaggcattactagatgaattactatttatcatgaataagtaatcaacagtttgaaaataaatcaaacatta 12876476  T
Q  113 agattaaaattaacttttt 131  Q
    | ||||||| |||||||||    
T  12876477 aaattaaaagtaacttttt 12876495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 39099018 - 39098924
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 131  Q
    |||||||| ||||| ||||||||||| |||| ||||| ||| | ||||||| |||||||||||| |||||||||||| ||||||||||| |||||    
T  39099018 tgttgcaagcattactagatgaattactattgatcattaattaataatcaataatttaaaaatgcatcaaacattaaaattaaaattaatttttt 39098924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 1149843 - 1149756
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatg 100  Q
    ||||||||||  ||||||  ||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  1149843 aaaatagtacttgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatg 1149756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 10555127 - 10555010
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattat--tattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacat 110  Q
    ||||||||||| |||||| |||| | |||||| ||||| |||||||||||   |||| ||||| ||   ||||| |||||||||||||||||||||||||    
T  10555127 aaaatagtacctgtaagtccaagatattgcaagcattactagatgaattacactattgatcattaa---gtaataaacaatttaaaaatgaatcaaacat 10555031  T
Q  111 taagattaaaattaacttttt 131  Q
    |||||| |||||||| |||||    
T  10555030 taagatcaaaattaatttttt 10555010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 13307931 - 13308003
Alignment:
Q  98 atgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||||||||||||||||||||||||||||||       ||| |||| ||| |||||| |||||||||||    
T  13307931 atgaatcaaacattaagattaaaattaactttttcaaaatagtcaatttcatgattgcaccatagaagctccc 13308003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 9864533 - 9864594
Alignment:
Q  108 cattaagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctcc 169  Q
    |||||||||||||||||||||||||       |||||||||| |||||||| ||||||||||    
T  9864533 cattaagattaaaattaactttttcaaaaaagtcagtttcctaactgcaccttagaagctcc 9864594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 13307889 - 13307936
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat 60  Q
    ||||||||||||||||||||||| |||||||| |||||  ||||||||    
T  13307889 aaaatagtacccgtaagttcaagatgttgcaagcattacaagatgaat 13307936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 41910895 - 41910863
Alignment:
Q  99 tgaatcaaacattaagattaaaattaacttttt 131  Q
    ||||||||||||| |||||||||||||||||||    
T  41910895 tgaatcaaacattcagattaaaattaacttttt 41910863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 3e-45; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 38528144 - 38527987
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  38528144 aaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 38528045  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||||||       |||||||||||||||||||||||||||||||    
T  38528044 aaatcaaaattaactttttcaaaaaaatcagtttcctgactgcaccgtagaagctccc 38527987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 39573079 - 39573235
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  39573079 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 39573178  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctcc 169  Q
    ||||||||||||||||||||       |||||||| | |||||||||||||||||||    
T  39573179 agattaaaattaactttttcaaaaaagtcagtttcataactgcaccgtagaagctcc 39573235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 22981073 - 22981218
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||| ||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22981073 gtaagtccaagatgttgcaatcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaatta 22981172  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||        ||||||||||||||||||| |||||||||||    
T  22981173 actttttttaaaaagtcagtttcctgactgcaccatagaagctccc 22981218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 35511389 - 35511232
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||||||| |||||||| ||||| || |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  35511389 aaaatagtacatgtaagttcaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 35511290  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || ||||||||||||||        |||||||||||||||||||||||||||||||    
T  35511289 aaatcaaaattaacttttttaaaaaagtcagtttcctgactgcaccgtagaagctccc 35511232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 36867042 - 36867187
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36867042 gtaagtccaagatgttgcaaacattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaatta 36867141  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||        ||| ||| |||||||||||||||||||||||    
T  36867142 acttttttaaaaaagtcaattttctgactgcaccgtagaagctccc 36867187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 40133665 - 40133810
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||| ||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40133665 gtaagtccaagatgttgcaagcattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaatta 40133764  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||       ||| ||| |||||||||||||||||||||||    
T  40133765 actttttcaaaaaagtcaattttctgactgcaccgtagaagctccc 40133810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 13 - 159
Target Start/End: Complemental strand, 15992447 - 15992301
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||| |||||||||||||||||||||||||||    
T  15992447 aaaatagtaccggtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaattaacaatttaaaaatgaatcaaacatta 15992348  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccg 159  Q
    ||||||||||||||||||||       |||||||| |||||||||||    
T  15992347 agattaaaattaactttttcaaaaaagtcagtttcatgactgcaccg 15992301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 2888352 - 2888199
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||| ||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  2888352 aaaatagtacctgtaagtccaagatgttacaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 2888253  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagc 166  Q
    | ||||||||||||||||||       ||| ||| |||||||||||||||||||    
T  2888252 aaattaaaattaactttttcaaaaaagtcaattttctgactgcaccgtagaagc 2888199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 22255450 - 22255607
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| | ||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  22255450 aaaatagtacctgtaagtccaagatgttgcaagccttactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 22255549  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || ||||||||||||||        ||||||||||||||| |||||||||||||||    
T  22255550 aaatcaaaattaactttttaaaaaaagtcagtttcctgactgtaccgtagaagctccc 22255607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 35934164 - 35934321
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||| |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||    
T  35934164 aaaatagtaccggtaagtccaagatgttgcaagcattactagttgaattattattgatcattaatcagtaatcaacaatttaaaaatgattcaaacatta 35934263  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | ||||||||||||||||||       |||||||| | |||||||||||||| |||||    
T  35934264 aaattaaaattaactttttcaaaaaaatcagtttcataactgcaccgtagaaactccc 35934321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 42343013 - 42343146
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnn 136  Q
    |||||||| ||||| |||||||||||  ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  42343013 tgttgcaagcattactagatgaattaccattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcagaa 42343112  T
Q  137 nnntcagtttcctgactgcaccgtagaagctccc 170  Q
       |||||||| ||||||||||||||||||||||    
T  42343113 aagtcagtttcatgactgcaccgtagaagctccc 42343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 22973989 - 22973871
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  22973989 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 22973890  T
Q  113 agattaaaattaacttttt 131  Q
    |||||||||||||||||||    
T  22973889 agattaaaattaacttttt 22973871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 8437233 - 8437390
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| ||||| |||||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||| ||||    
T  8437233 aaaatagtacctgtaagtccaagatgttgaaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaatatta 8437332  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||||||       ||||||||||||||||| |||||| ||||||    
T  8437333 aaatcaaaattaactttttcaaaaaagtcagtttcctgactgcatcgtagatgctccc 8437390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 14409248 - 14409091
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||||||||| || |||||||| |||| ||||| | |||| ||||||||||||||||||||||| |||||||    
T  14409248 aaaatagtacttgtaagtccaagatgttgcaaacattactaaatgaattactattgatcattattcagcaatcaacaatttaaaaatgaatcgaacatta 14409149  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | ||||||||||| ||||||       |||||||||||||||||||||||||||||||    
T  14409148 aaattaaaattaaatttttcaaaaaaatcagtttcctgactgcaccgtagaagctccc 14409091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 24886355 - 24886512
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||| |||||||||||||||||||||||||||||||    
T  24886355 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacatta 24886454  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       |||||||| |||||||||| || ||||||||    
T  24886455 agatcaaaattaactttttcaaaaaagtcagtttcttgactgcaccataaaagctccc 24886512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 25669868 - 25669997
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnn 136  Q
    |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        
T  25669868 tgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcaaaa 25669967  T
Q  137 nnntcagtttcctgactgcaccgtagaagc 166  Q
       |||||||| ||||||||||||||||||    
T  25669968 aaatcagtttcatgactgcaccgtagaagc 25669997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 25889638 - 25889795
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||| | |||| ||||| || ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  25889638 aaaatagtacctgtaaatccaagatgttgaaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacatta 25889737  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| ||||||||||||| |       ||||||||||||||||| |||||||||||||    
T  25889738 agatcaaaattaacttttccagaaaagtcagtttcctgactgcatcgtagaagctccc 25889795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 27330584 - 27330729
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  27330584 gtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatgaacgatttaaaaatgaatcaaacattaagattaaaatta 27330683  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||       ||| |||| ||||||||||||||||||||||    
T  27330684 actttttcaaacaagtcaatttcatgactgcaccgtagaagctccc 27330729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 7208771 - 7208653
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||||||| ||||||||  |||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  7208771 aaaatagtacatgtaagttcaagatgttgcaagtattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 7208672  T
Q  113 agattaaaattaacttttt 131  Q
    | || ||||||||||||||    
T  7208671 aaataaaaattaacttttt 7208653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 19120127 - 19120284
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    |||||||||||   ||||  ||| |||||||| ||||| ||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||| |||||    
T  19120127 aaaatagtacctcaaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtgatcaacaatttaaaaatgaatcaatcatta 19120226  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||||||| |||||||||| |||||||||||    
T  19120227 agattaaaattaactttttcaaaaaagtcagtttcatgactgcaccttagaagctccc 19120284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 22019915 - 22020048
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnn 136  Q
    ||||| || ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||        
T  22019915 tgttgtaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatattaagattaaaattaactttttcaaaa 22020014  T
Q  137 nnntcagtttcctgactgcaccgtagaagctccc 170  Q
       |||||||| ||||||||||||||||| ||||    
T  22020015 aagtcagtttcatgactgcaccgtagaagttccc 22020048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 25500833 - 25500676
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| ||||||  ||| |||||||| ||||| |||||||| || | || ||||| |||||||||| |||||||||||||||||||||| | ||    
T  25500833 aaaatagtacctgtaagtctaagatgttgcaagcattactagatgaaatactgttgatcattaatcagtaattaacaatttaaaaatgaatcaaatacta 25500734  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||||||| ||||||||||||||||||||||    
T  25500733 agattaaaattaactttttcaaaaaaatcagtttcatgactgcaccgtagaagctccc 25500676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 31705519 - 31705362
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||   ||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  31705519 aaaatagtacatataagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 31705420  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||||||       ||| |||| |||||||||||||||| |||||    
T  31705419 aaataaaaattaactttttcaaaaaagtcaatttcttgactgcaccgtagaatctccc 31705362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 25 - 166
Target Start/End: Original strand, 36860704 - 36860845
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||| ||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  36860704 gtaagtccaagatgttgcaagcattactaaatgaattactattaatcatgaattagtaatcaacaatttaaaaatgaatcaagcattaagattaaaatta 36860803  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagc 166  Q
    |||||||        ||| ||| |||||||||||||||||||    
T  36860804 acttttttaaaaaagtcaattttctgactgcaccgtagaagc 36860845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 31786553 - 31786397
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||| | |||| |||||||| ||||| ||||||||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||    
T  31786553 aaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 31786454  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctcc 169  Q
    | || |||||||||||||||       |||||||||||| |||||| ||||| ||||    
T  31786453 atatcaaaattaactttttcaaaaaagtcagtttcctgattgcaccatagaatctcc 31786397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 35826393 - 35826275
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  35826393 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacatta 35826294  T
Q  113 agattaaaattaacttttt 131  Q
    |||| ||||||||||||||    
T  35826293 agatcaaaattaacttttt 35826275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 699418 - 699563
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | |||||| |||| |||||||| ||||| ||||||||||| |||| || || |||||||||| |||||||||||||||||||||||||||    
T  699418 aaaatagtatctgtaagtccaagatgttgcaagcattactagatgaattactattgattattaatcagtaattaacaatttaaaaatgaatcaaacatta 699517  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcacc 158  Q
    |||| ||||||||||||| |       |||||||||||||||||||    
T  699518 agatcaaaattaacttttccaaaaaagtcagtttcctgactgcacc 699563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 17157938 - 17157781
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||   ||||| |||| |||||||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  17157938 aaaatagtacttttaagtccaagatgttgcaagcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 17157839  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || ||| || ||||||||       ||| |||| |||||| |||||||||||||||    
T  17157838 aaatcaaacttgactttttcaaaaaagtcaatttcttgactgtaccgtagaagctccc 17157781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 26269077 - 26269234
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| ||||||| ||| ||||| || || || ||||| ||||| || | ||||| |||||||||||||||||||||||||||| ||| |||||    
T  26269077 aaaatagtacctgtaagtttaagatgttgtaagcaatactagataaattactactgatcattaatcagtaatcaacaatttaaaaatgaaccaatcatta 26269176  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||||||| |||||||||||||||| |||||    
T  26269177 agattaaaattaactttttcataaaagtcagtttcatgactgcaccgtagaaactccc 26269234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 28416458 - 28416301
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||   ||||| |||| |||||||| ||||| | ||||||||| |||| ||||| |||||  ||||||||||||||||| |||||||||||||    
T  28416458 aaaatagtacttttaagtccaagatgttgcaagcattacttgatgaattactattgatcattaatcaacaatcaacaatttaaaaaagaatcaaacatta 28416359  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||| ||| ||||||||||||||||||||||    
T  28416358 agattaaaattaactttttcaaaaaagtcagcttcatgactgcaccgtagaagctccc 28416301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 33908501 - 33908657
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||| ||||| |||| ||||| |||||| |||||||||||||||||||||||||||||||    
T  33908501 aaaatagtacatgtaagtccaagatgttgcaagcattactagat-aattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacatta 33908599  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       ||||||| || ||||||||||||| ||||||    
T  33908600 agatcaaaattaactttttcaaaaaagtcagttttctaactgcaccgtagatgctccc 33908657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 8741792 - 8741673
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||  |||||||| ||| | |||||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  8741792 aaaatagtacatgtaagtccaaaatgttgcaagcatcactagatgaaatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 8741693  T
Q  113 agattaaaattaactttttc 132  Q
    ||||||||||||||||||||    
T  8741692 agattaaaattaactttttc 8741673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 9200516 - 9200648
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnn 136  Q
    |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||  |||| ||||||||||| ||||||        
T  9200516 tgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaaatttaaaattaaaattaattttttcaaaa 9200615  T
Q  137 nnntcagtttcctgactgcaccgtagaagctcc 169  Q
       |||||||| |||||||||||||||||||||    
T  9200616 aaatcagtttcatgactgcaccgtagaagctcc 9200648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 25 - 169
Target Start/End: Original strand, 12910635 - 12910779
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||| ||||| ||||||||||| |||| | ||| |||||| ||||||||||||||||||||||||||||||||||| | |||||    
T  12910635 gtaagtccaagatgttgcaagcattactagatgaattactattgaacattaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcataatta 12910734  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctcc 169  Q
    |||||| |       ||||||||||||||||||| ||||||||||    
T  12910735 acttttccaaaaaagtcagtttcctgactgcaccatagaagctcc 12910779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 43254156 - 43254280
Alignment:
Q  46 cattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtt 145  Q
    ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |       ||| ||    
T  43254156 cattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttccaaaaaagtcaatt 43254255  T
Q  146 tcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||| |||||||||||    
T  43254256 tcctgactgcaccatagaagctccc 43254280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 32563408 - 32563563
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| ||||||||  |||| ||||| |||||||||| ||||| |||||| ||| |||||||||||||||||||||||||||    
T  32563408 aaaatagtacatgtaagtctaagatgttgcaagaattactagataaattattattgatcattaatcagcaattaacaatttaaaaatgaatcaaacatta 32563507  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctc 168  Q
    | ||||||||||||||||||       |||||||| | ||||||||||||||||||    
T  32563508 aaattaaaattaactttttcaaaaaagtcagtttcataactgcaccgtagaagctc 32563563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 5830160 - 5830278
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatg-aatcaaacatt 111  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||| |||||||||||    
T  5830160 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaatcaaacatt 5830259  T
Q  112 aagattaaaattaactttt 130  Q
    || || |||||||||||||    
T  5830260 aaaatcaaaattaactttt 5830278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 7693513 - 7693607
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 131  Q
    |||||||| ||||| ||||||||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7693513 tgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaacttttt 7693607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 30969231 - 30969113
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| |  |||||||||| || |||||  |||| ||||||| ||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  30969231 aaaatagtatctataagttcaagatgctgcaagtattactagatgagttactattaatcattaatcagtaatccacaatttaaaaatgaatcaaacatta 30969132  T
Q  113 agattaaaattaacttttt 131  Q
    | |||||||||||||||||    
T  30969131 aaattaaaattaacttttt 30969113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 27318383 - 27318238
Alignment:
Q  26 taagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaattt-aaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| ||| |||||||||||||| || |||||||| |||| ||||| |||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  27318383 taagtttaagatgttgcaaacattactatatgaattactattgatcattaatcaaaaatcaacaattttaaaaatgaatcaaacattaagattaaaatta 27318284  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||        ||||||| ||||||||||| ||||| |||||    
T  27318283 acttttttaaaaaagtcagttttctgactgcaccatagaaactccc 27318238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 43308567 - 43308410
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| ||||||  ||| |||||||| ||||| ||||||||||| |||| ||||| |||||| ||||||||||||||||| |||||||| | ||    
T  43308567 aaaatagtacctgtaagtcgaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaacgaatcaaatacta 43308468  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||||||       |||||||||| |||||||| | |||||||||    
T  43308467 aaatcaaaattaactttttcaaaaaagtcagtttcctaactgcaccattgaagctccc 43308410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 5837823 - 5837942
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| | |||| |||| |||||||| ||||| ||||||||||| | || ||||| ||||| |||||||||||||||||||||||||| |||||    
T  5837823 aaaatagtacctgcaagtccaagatgttgcaagcattactagatgaattactgttgatcattaatcaataatcaacaatttaaaaatgaatcaatcatta 5837922  T
Q  113 agattaaaattaactttttc 132  Q
    | |||||||||||| |||||    
T  5837923 aaattaaaattaaccttttc 5837942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 15724756 - 15724875
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||  | ||| || ||||| ||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  15724756 aaaatagtacttgtaagtccaaaatattgtaagcattactagatgaattactattaatcattaatcaataatcaacaatttaaaaatgaatcaaacatta 15724855  T
Q  113 agattaaaattaactttttc 132  Q
    |  |||||||||||||||||    
T  15724856 aagttaaaattaactttttc 15724875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 35504633 - 35504752
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| ||||||||  |||| ||||||||||| |||| || || ||||||||||||||||||||||||||||||||||||||    
T  35504633 aaaatagtacatgtaagtccaagatgttgcaagtattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaacatta 35504732  T
Q  113 agattaaaattaactttttc 132  Q
    | || |||||| ||||||||    
T  35504733 aaatcaaaattgactttttc 35504752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 8467018 - 8467112
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 131  Q
    |||||||| ||||| ||||||||||| |||| ||||| ||| ||||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  8467018 tgttgcaagcattactagatgaattactattgatcattaattagtaatcaacagtttaaaaatgaatcaaacattaaaaataaaattaacttttt 8467112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 170
Target Start/End: Complemental strand, 23116086 - 23115980
Alignment:
Q  64 tattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtaga 163  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||       ||| |||||||||| |||||||||    
T  23116086 tattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaactttttcaaaaaagtcattttcctgacttcaccgtaga 23115987  T
Q  164 agctccc 170  Q
    | |||||    
T  23115986 aactccc 23115980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 76 - 170
Target Start/End: Complemental strand, 23954646 - 23954552
Alignment:
Q  76 atcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| ||||||||||||||||||||||| |||||||||||| | |||||||||||||       ||||||||||||||||||| |||||||||||    
T  23954646 atcattaatcaacaatttaaaaatgaattaaacattaagatcataattaactttttcaaaaaagtcagtttcctgactgcaccatagaagctccc 23954552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 13956269 - 13956116
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| || ||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||  || |   ||||||||||    
T  13956269 aaaatagtacctgttagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaattt--aactttttcaaacatta 13956172  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctc 168  Q
    | || ||||||||| |||||       |||| || |||||||||||||||||||||    
T  13956171 aaatcaaaattaacattttcaaaaaaatcagctttctgactgcaccgtagaagctc 13956116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 21088654 - 21088558
Alignment:
Q  32 caaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 131  Q
    |||| ||||| || ||||| ||||||||||| |||||||||||||| | |||||||   |||||||||||||||||||||||||||||| |||| |||||    
T  21088654 caagatgttgtaagcattactagatgaattactattaatcatgaataaataatcaa---tttaaaaatgaatcaaacattaagattaaagttaatttttt 21088558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 1429069 - 1428983
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaa---tcaacaatttaaa 96  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||   |||||||||||||    
T  1429069 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatattcaacaatttaaa 1428983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 14919390 - 14919327
Alignment:
Q  69 atcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttc 132  Q
    ||||| |||||| |||| | |||||||||||||||||||||||||||| |||||||| ||||||    
T  14919390 atcattaatcagaaatctaaaatttaaaaatgaatcaaacattaagatcaaaattaattttttc 14919327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 170
Target Start/End: Original strand, 11898210 - 11898240
Alignment:
Q  140 tcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||||||||||||||||||||||||||    
T  11898210 tcagtttcctgactgcaccgtagaagctccc 11898240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 1e-44; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 44913932 - 44914090
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattaga---tgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaaca 109  Q
    ||||||||||  |||||| |||| |||||||| ||||||||||   ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44913932 aaaatagtacatgtaagtccaagatgttgcaagcattattagaaaatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaaca 44914031  T
Q  110 ttaagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctc 168  Q
    |||||||||||||||||||||||        |||||| |||||||||||||||||||||    
T  44914032 ttaagattaaaattaactttttcaaaaaaaccagtttgctgactgcaccgtagaagctc 44914090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 4167202 - 4167347
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| |||||||| ||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4167202 gtaagtccaagatgttgcaagcattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaattaaacattaagattaaaatta 4167301  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||       ||| ||| |||||||||||||||||||||||    
T  4167302 actttttcaaaaaagtcaattttctgactgcaccgtagaagctccc 4167347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 41961108 - 41961265
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    |||||| |||| |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  41961108 aaaataatacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacatta 41961207  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||||||       |||||||||||||||||||||||||||||||    
T  41961208 aaatcaaaattaactttttcaaaaaattcagtttcctgactgcaccgtagaagctccc 41961265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 37 - 170
Target Start/End: Complemental strand, 33660288 - 33660155
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnn 136  Q
    |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||        
T  33660288 tgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaattaaaattaactttttcagaa 33660189  T
Q  137 nnntcagtttcctgactgcaccgtagaagctccc 170  Q
       |||||||| ||||||||||||||||||||||    
T  33660188 aagtcagtttcatgactgcaccgtagaagctccc 33660155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 25 - 169
Target Start/End: Complemental strand, 43648168 - 43648024
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatta 124  Q
    |||||| |||| ||| |||||||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||| || |||||||    
T  43648168 gtaagtccaagatgtcgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaatta 43648069  T
Q  125 actttttcnnnnnnntcagtttcctgactgcaccgtagaagctcc 169  Q
    ||||||||       ||| ||||||||||||||||||||||||||    
T  43648068 actttttcaaaaaagtcaatttcctgactgcaccgtagaagctcc 43648024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 11366316 - 11366158
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt 111  Q
    ||||||||||| |||||| |||| |||||||| ||||| ||||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  11366316 aaaatagtacctgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt 11366217  T
Q  112 aagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    || ||||||||||||||||||       ||| ||| |||||||||||||||| ||||||    
T  11366216 aaaattaaaattaactttttcaaaaaaatcaattttctgactgcaccgtagatgctccc 11366158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 19424574 - 19424420
Alignment:
Q  16 atagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaaga 115  Q
    |||||||| | ||||  ||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  19424574 atagtacctgcaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcattaaga 19424475  T
Q  116 ttaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||||||||||||       |||||||  ||||||||||||||||||||||    
T  19424474 ttaaaattaactttttcaaaaaagtcagtttgatgactgcaccgtagaagctccc 19424420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 18494216 - 18494059
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| ||||| || ||||| ||||||||||  |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  18494216 aaaatagtacatgtaagtccaagatgttgtaagcattactagatgaattgctattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 18494117  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||       |||||||| ||||| ||||||| ||||||||    
T  18494116 agattaaaattaactttttcaaaaaagtcagtttcatgactacaccgtataagctccc 18494059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 39167304 - 39167150
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||  |||||| | ||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  39167304 aaaatagtacatgtaagtccaaattgttgctagcattactagatgaattactattaattatgaatcagtaatcaacaatttaaaaatgaataaaacatta 39167205  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagct 167  Q
    ||||||||||||||||||||       ||||||| |||| ||||| |||||||||    
T  39167204 agattaaaattaactttttcaaaaaagtcagttttctgattgcacagtagaagct 39167150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 2325313 - 2325156
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||| | |||| |||||||| ||||| ||||||||||| |||| || || ||||||||||||||||||||||||| ||||||||||||    
T  2325313 aaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaataaatcaaacatta 2325214  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| ||||||||||||||        ||| ||| |||||||||||||||||||||||    
T  2325213 agatcaaaattaactttttaaaaaaaatcaattttctgactgcaccgtagaagctccc 2325156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 5881797 - 5881916
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| |||||||| ||||| ||||||||||| |||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  5881797 aaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattattcagtaatcaacaatttaaaaatgaatcaaacatta 5881896  T
Q  113 agattaaaattaactttttc 132  Q
    ||||||||||||||||||||    
T  5881897 agattaaaattaactttttc 5881916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 7006873 - 7006754
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||  |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  7006873 aaaatagtacttgtaagtccaagatgttgcaagcattactagatgaatttctattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 7006774  T
Q  113 agattaaaattaactttttc 132  Q
     |||||||||||||||||||    
T  7006773 tgattaaaattaactttttc 7006754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 33709167 - 33709015
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||| | |||| |||||||| ||||| ||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  33709167 aaaatagtacttgtaaatccaagatgttgcaagcattactagatgaattactattgatcattaatcattaatcaacaatttaaaaatgaatcaaacatta 33709068  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaag 165  Q
    | ||||||||||||||||||       ||||| || |||||||||||||||||    
T  33709067 aaattaaaattaactttttcaaaaaattcagtatcatgactgcaccgtagaag 33709015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 3177207 - 3177362
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| | || ||| ||||| ||||||||||| |||| ||||||||| ||||||||||||||| ||||| ||||||||||||    
T  3177207 aaaatagtacatgtaagtccaagatattacaagcattactagatgaattactatttatcatgaataagtaatcaacaatttgaaaataaatcaaacatta 3177306  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctc 168  Q
    | ||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  3177307 aaattaaaagtaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctc 3177362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 19289258 - 19289101
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    |||||| |||| |||||| |||| | |||||| ||||| ||||||||||| |||| ||||| |||||| ||| |||||||||||||||||| ||||||||    
T  19289258 aaaataatacctgtaagtccaagatattgcaagcattactagatgaattactattgatcattaatcagaaattaacaatttaaaaatgaattaaacatta 19289159  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       |||||||||| |||||||| |||||||||||    
T  19289158 agatcaaaattaactttttcaaaaaagtcagtttcctaactgcaccatagaagctccc 19289101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 31862120 - 31862277
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| | ||| | |||||| ||||||||||| |||| ||||| |||||||||||||| |||||||||||||||||| ||||    
T  31862120 aaaatagtacttgtaagtccaagatattgtagacattactagatgaattactattgatcattaatcagtaatcaacgatttaaaaatgaatcaaatatta 31862219  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||| |||||||||||||||       ||||||||| ||||||||| |||||||||||    
T  31862220 agatcaaaattaactttttcaaaaaagtcagtttcccgactgcaccatagaagctccc 31862277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 43770783 - 43770664
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| |  |||||||||| |||||||| ||||| ||||||||||  |||| ||||| ||| || |||||||||||||||||||||||||||||||    
T  43770783 aaaatagtatctttaagttcaagatgttgcaagcattactagatgaatttctattgatcattaattagaaatcaacaatttaaaaatgaatcaaacatta 43770684  T
Q  113 agattaaaattaactttttc 132  Q
    ||||||||||||||||||||    
T  43770683 agattaaaattaactttttc 43770664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 4763899 - 4764057
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| |||||| |||| | |||||| ||||| ||| ||||||| |||| ||||| ||||||||||||| ||||||||||||||||||||||||    
T  4763899 aaaatagtacctgtaagtccaagatattgcaagcattactagttgaattactattgatcattaatcagtaatcaataatttaaaaatgaatcaaacatta 4763998  T
Q  113 agattaaaattaac-tttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || ||||||||| |||||        |||||||||| ||||||||||||||||||||    
T  4763999 aaatcaaaattaacttttttttaaaaagtcagtttccttactgcaccgtagaagctccc 4764057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 26357858 - 26357963
Alignment:
Q  26 taagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaa 125  Q
    ||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  26357858 taagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaa 26357957  T
Q  126 cttttt 131  Q
    ||||||    
T  26357958 cttttt 26357963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 35959179 - 35959317
Alignment:
Q  32 caaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 131  Q
    |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  35959179 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaaatcaaaattaacttttt 35959278  T
Q  132 cnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |       ||| |||  ||| ||||||||||||||||||    
T  35959279 caaaaaagtcaattttttgagtgcaccgtagaagctccc 35959317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 41051235 - 41051083
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| ||||||||||| ||||| || ||||  |||||||||| ||||| ||||| ||||| |||||||||||| |||||||||||||||||||    
T  41051235 aaaatagtacctgtaagttcaagatgttgtaagcattgctagatgaattgttattgatcattaatcaataatcaacaattcaaaaatgaatcaaacatta 41051136  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctc 168  Q
    | ||||||||||| ||||||       ||| |||| ||||||||||||||||||||    
T  41051135 aaattaaaattaattttttc---aaaatcattttcatgactgcaccgtagaagctc 41051083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 19500850 - 19500739
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||| |||||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| ||||    
T  19500850 aaaatagtacatgtaatttcaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatatta 19500751  T
Q  113 agattaaaatta 124  Q
    |||| |||||||    
T  19500750 agatcaaaatta 19500739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 41465769 - 41465888
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||||||||| || |||||||| |||| ||||| |||||| |||||||||||||||| |||||| |||||||    
T  41465769 aaaatagtacatgtaagtccaagatgttgcaaacattactatatgaattactattgatcattaatcagcaatcaacaatttaaaattgaatcgaacatta 41465868  T
Q  113 agattaaaattaactttttc 132  Q
    |||| |||||||||||||||    
T  41465869 agatcaaaattaactttttc 41465888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 27349883 - 27349731
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||| | ||||||  ||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| ||      
T  27349883 aaaatagtatctgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatat-- 27349786  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
       |||||||||||||||||       |||||||| ||||||||| ||||||||||||    
T  27349785 ---ttaaaattaactttttcagaaaagtcagtttcatgactgcactgtagaagctccc 27349731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 13711727 - 13711846
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||| ||||||  ||| ||||||||||| || ||||||||||| |||| ||||| |||||||||||||| ||||||||||||||||| ||||     
T  13711727 aaaatagtacctgtaagtctaagatgttgcaaacaatactagatgaattactattgatcattaatcagtaatcaacgatttaaaaatgaatcaatcattt 13711826  T
Q  113 agattaaaattaactttttc 132  Q
    | ||||||||||| ||||||    
T  13711827 aaattaaaattaattttttc 13711846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 170
Target Start/End: Complemental strand, 29242046 - 29241923
Alignment:
Q  47 attattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnnntcagttt 146  Q
    |||| ||||||||||| |||| | ||| |||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| |       |||||||    
T  29242046 attactagatgaattactattgaacattaatcagcaatcaacaatttaaaaatgaatcaaacattaagatcataattaacttttccaaaaagttcagttt 29241947  T
Q  147 cctgactgcaccgtagaagctccc 170  Q
    |||||||||||| |||||||||||    
T  29241946 cctgactgcaccatagaagctccc 29241923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 31570669 - 31570551
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||| ||| |||||||| ||||  ||||||||||| |||| ||||| |||||||||||||  ||||||||||||||||| |||||    
T  31570669 aaaatagtacttgtaagtttaagatgttgcaagcattgctagatgaattactattgatcattaatcagtaatcaaatatttaaaaatgaatcaatcatta 31570570  T
Q  113 agattaaaattaacttttt 131  Q
    | || ||||||||||||||    
T  31570569 aaatgaaaattaacttttt 31570551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 37 - 132
Target Start/End: Complemental strand, 18257449 - 18257354
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttc 132  Q
    |||||||| ||||| |||||||||||||||| ||||| ||||||||||| ||||||| ||||||||| ||  ||||| ||||||||||||||||||    
T  18257449 tgttgcaagcattactagatgaattattatttatcattaatcagtaatcgacaattttaaaatgaataaattattaatattaaaattaactttttc 18257354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 33902321 - 33902400
Alignment:
Q  52 tagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 131  Q
    |||||||||||||||| || || |||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  33902321 tagatgaattattattgattattaatctgtaatcaacaatttaaaaataaatcaaacattaagatcaaaattaacttttt 33902400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 41463501 - 41463407
Alignment:
Q  37 tgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 131  Q
    ||||| |||||||| ||||| ||||| |||| ||||| ||||| |||| || |||||||||||||||||| ||||||||||||||||||||||||    
T  41463501 tgttgtaaacattaatagataaattactattgatcattaatcaataattaataatttaaaaatgaatcaatcattaagattaaaattaacttttt 41463407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 45328028 - 45328114
Alignment:
Q  83 atcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||       ||||||| |||||||||||||||||||||||    
T  45328028 atcaacaatttaaaaatgaatcaaacattaagatcaaaattaactttttcaaaaaagtcagttt-ctgactgcaccgtagaagctccc 45328114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 33550853 - 33550800
Alignment:
Q  78 cagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 131  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33550853 cagtaatcaacaatttaaaaatgaatcaaacattaagatcaaaattaacttttt 33550800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 37905990 - 37906098
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatg-aatcaaacattaagattaaaatt 123  Q
    |||||| |||| ||||||||  |||| | ||||||||| |||| ||||| |||||||||| ||||||||||||||| ||||||||||||| || ||||||    
T  37905990 gtaagtccaagatgttgcaagaattactggatgaattactattgatcattaatcagtaattaacaatttaaaaatgaaatcaaacattaaaatcaaaatt 37906089  T
Q  124 aactttttc 132  Q
    || ||||||    
T  37906090 aattttttc 37906098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 4478633 - 4478717
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaa 97  Q
    ||||||||| | |||||| |||| |||||||| ||||| ||||||||||  |||| ||||| |||||||||||||||||||||||    
T  4478633 aaaatagtatcggtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcagtaatcaacaatttaaaa 4478717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 4264011 - 4263926
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaa 98  Q
    ||||||||||   |||||||||| |||||||| ||||| |||||||| || |||| |||||  |||||||||||||||||||||||    
T  4264011 aaaatagtacatataagttcaagatgttgcaagcattactagatgaaataatattgatcattgatcagtaatcaacaatttaaaaa 4263926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 17054004 - 17053963
Alignment:
Q  75 aatcagtaatcaacaatttaaaaatgaatcaaacattaagat 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  17054004 aatcagtaatcaacaatgtaaaaatgaatcaaacattaagat 17053963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 17071645 - 17071604
Alignment:
Q  75 aatcagtaatcaacaatttaaaaatgaatcaaacattaagat 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  17071645 aatcagtaatcaacaatgtaaaaatgaatcaaacattaagat 17071604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 131
Target Start/End: Complemental strand, 4263756 - 4263726
Alignment:
Q  101 aatcaaacattaagattaaaattaacttttt 131  Q
    |||||||||||||||||||||||||||||||    
T  4263756 aatcaaacattaagattaaaattaacttttt 4263726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 9200215 - 9200179
Alignment:
Q  206 ctaggtatatggacattatatttaagatgattgattt 242  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  9200215 ctaggtatatggacattatatttaagaggatttattt 9200179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 36642256 - 36642296
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattatta 53  Q
    ||||||||||| ||||||||||| |||||||| ||||||||    
T  36642256 aaaatagtaccggtaagttcaagatgttgcaagcattatta 36642296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 44286217 - 44286285
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagt 81  Q
    ||||||||| | ||||||  ||| |||||||| |||| |||||||||||| |||| ||||| |||||||    
T  44286217 aaaatagtatctgtaagtctaagatgttgcaagcattgttagatgaattactattgatcattaatcagt 44286285  T

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Target: scaffold0002 (Bit Score: 85; Significance: 2e-40; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 415 - 515
Alignment:
Q  32 caaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 131  Q
    |||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  415 caagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaacttttt 514  T
Q  132 c 132  Q
    |    
T  515 c 515  T

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Target: scaffold0002; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 408346 - 408227
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  408346 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatta 408247  T
Q  113 agattaaaattaactttttc 132  Q
    | || |||||||| ||||||    
T  408246 aaataaaaattaattttttc 408227  T

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Target: scaffold0002; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 94017 - 93900
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||  |||| ||||| ||||| ||||||||||||| ||||||||||||||||||    
T  94017 aaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcactaatcaacaattt-aaaatgaatcaaacatta 93919  T
Q  113 agattaaaattaacttttt 131  Q
    | || ||||||||||||||    
T  93918 aaatcaaaattaacttttt 93900  T

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Target: scaffold0291 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 8155 - 8312
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| | |||    
T  8155 aaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcgtta 8254  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || |||||||||||| ||       ||| |||||||||||||||||||||||||||    
T  8255 aaatcaaaattaactttatcaaaaaagtcaatttcctgactgcaccgtagaagctccc 8312  T

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Target: scaffold0318 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 12177 - 12332
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  ||||||  ||| |||||||| ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||| ||||||||||||    
T  12177 aaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaat-aatcaaacatta 12275  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctcc 169  Q
    |||||||||||||||||||        | |||||| |||||||||||||||||||||    
T  12276 agattaaaattaacttttttaaaaaagtaagtttcatgactgcaccgtagaagctcc 12332  T

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Target: scaffold0061 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 44224 - 44381
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| |  |||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  44224 aaaatagtacatgtaagtccaagttgttgcaagcattactgaatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacatta 44323  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || ||||| |||||||||       |||||||  |||||||| |||||||||||||    
T  44324 aaatcaaaatcaactttttcaaaaaagtcagtttgttgactgcatcgtagaagctccc 44381  T

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Target: scaffold0017 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 154563 - 154406
Alignment:
Q  13 aaaatagtacccgtaagttcaaggtgttgcaaacattattagatgaattattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatta 112  Q
    ||||||||||  |||||| |||| |||||||| ||||| |  |||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  154563 aaaatagtacatgtaagtccaagttgttgcaagcattactgaatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacatta 154464  T
Q  113 agattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    | || ||||| |||||||||       |||||||  |||||||| |||||||||||||    
T  154463 aaatcaaaatcaactttttcaaaaaagtcagtttgttgactgcatcgtagaagctccc 154406  T

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Target: scaffold0022 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 145921 - 145775
Alignment:
Q  25 gtaagttcaaggtgttgcaaacattattagatgaat-tattattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaatt 123  Q
    |||||| |||| |||||||| ||||| || |||||| ||  ||| ||||| |||||||||| || ||||||||||||||| ||||||||| || ||||||    
T  145921 gtaagtccaagatgttgcaagcattactaaatgaatatacaattgatcattaatcagtaataaaaaatttaaaaatgaattaaacattaaaatcaaaatt 145822  T
Q  124 aactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    |||||||||       ||| |||||||||||||||||||||||||||    
T  145821 aactttttcaaaaaagtcaatttcctgactgcaccgtagaagctccc 145775  T

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Target: scaffold0008 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 267606 - 267701
Alignment:
Q  75 aatcagtaatcaacaatttaaaaatgaatcaaacattaagattaaaattaactttttcnnnnnnntcagtttcctgactgcaccgtagaagctccc 170  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||       |||||||| |||||||||| ||||| |||||    
T  267606 aatcagtaatcaacaatttaaaaatgaatcaaatattaagatcaaaattaattttttcaaaaaagtcagtttcttgactgcaccatagaatctccc 267701  T

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