View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17641_low_11 (Length: 302)

Name: NF17641_low_11
Description: NF17641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17641_low_11
NF17641_low_11
[»] chr1 (33 HSPs)
chr1 (19-282)||(25493888-25494154)
chr1 (159-273)||(31794226-31794340)
chr1 (159-273)||(50901581-50901695)
chr1 (159-249)||(24047064-24047154)
chr1 (159-271)||(33700735-33700847)
chr1 (159-274)||(6122793-6122908)
chr1 (159-262)||(17410242-17410345)
chr1 (159-274)||(21547442-21547557)
chr1 (181-275)||(8177166-8177260)
chr1 (159-253)||(12587290-12587383)
chr1 (159-249)||(27476733-27476823)
chr1 (159-273)||(52116743-52116857)
chr1 (193-273)||(19528323-19528403)
chr1 (159-274)||(40257398-40257513)
chr1 (175-269)||(17745234-17745328)
chr1 (159-231)||(1094567-1094639)
chr1 (175-275)||(6650593-6650693)
chr1 (159-226)||(3799953-3800020)
chr1 (195-274)||(4566547-4566626)
chr1 (159-254)||(10526842-10526937)
chr1 (159-262)||(52336736-52336839)
chr1 (117-147)||(11768923-11768953)
chr1 (159-273)||(16893394-16893508)
chr1 (159-249)||(36124857-36124947)
chr1 (209-275)||(36371468-36371534)
chr1 (159-249)||(44961789-44961879)
chr1 (170-247)||(8077666-8077742)
chr1 (181-274)||(8904413-8904506)
chr1 (216-273)||(9165214-9165271)
chr1 (159-196)||(10334052-10334089)
chr1 (166-247)||(31605817-31605898)
chr1 (159-235)||(42949254-42949330)
chr1 (166-274)||(51814493-51814601)
[»] chr8 (27 HSPs)
chr8 (159-274)||(16852339-16852454)
chr8 (159-273)||(23874345-23874458)
chr8 (162-274)||(19703452-19703564)
chr8 (159-273)||(968362-968476)
chr8 (166-273)||(23361618-23361725)
chr8 (159-255)||(6536538-6536634)
chr8 (166-262)||(43594287-43594383)
chr8 (159-275)||(44780076-44780192)
chr8 (159-273)||(11819776-11819890)
chr8 (159-273)||(18540298-18540412)
chr8 (159-273)||(26688865-26688979)
chr8 (168-262)||(35690035-35690129)
chr8 (166-271)||(2203494-2203599)
chr8 (159-275)||(28783058-28783174)
chr8 (166-272)||(29858018-29858124)
chr8 (160-249)||(3305151-3305240)
chr8 (166-271)||(3624582-3624686)
chr8 (201-274)||(5801046-5801119)
chr8 (217-273)||(6569791-6569847)
chr8 (159-275)||(8484997-8485113)
chr8 (174-274)||(18897165-18897265)
chr8 (107-146)||(12957551-12957590)
chr8 (208-274)||(5264543-5264609)
chr8 (159-249)||(10287499-10287589)
chr8 (159-249)||(11492035-11492125)
chr8 (159-253)||(31087220-31087314)
chr8 (112-145)||(13581847-13581880)
[»] chr5 (19 HSPs)
chr5 (159-273)||(29075781-29075895)
chr5 (159-273)||(16773807-16773921)
chr5 (159-273)||(17028226-17028340)
chr5 (159-273)||(21589288-21589402)
chr5 (170-274)||(30883171-30883275)
chr5 (159-254)||(28285271-28285366)
chr5 (159-246)||(84851-84938)
chr5 (181-275)||(26078035-26078129)
chr5 (181-273)||(21549121-21549213)
chr5 (166-274)||(22020831-22020939)
chr5 (159-270)||(12877696-12877807)
chr5 (159-234)||(29173529-29173604)
chr5 (159-274)||(30109271-30109385)
chr5 (159-205)||(4793042-4793088)
chr5 (159-252)||(30000137-30000230)
chr5 (170-247)||(33709603-33709679)
chr5 (159-247)||(2331950-2332037)
chr5 (159-199)||(17877122-17877162)
chr5 (181-273)||(25627057-25627149)
[»] chr2 (27 HSPs)
chr2 (159-273)||(1435064-1435177)
chr2 (159-270)||(33962746-33962857)
chr2 (166-273)||(23052492-23052599)
chr2 (166-276)||(39714989-39715099)
chr2 (159-274)||(29503270-29503384)
chr2 (159-274)||(37480074-37480189)
chr2 (166-273)||(42327364-42327471)
chr2 (159-271)||(12086091-12086203)
chr2 (159-242)||(25637182-25637265)
chr2 (159-274)||(42602553-42602668)
chr2 (208-273)||(11062360-11062425)
chr2 (162-275)||(11251085-11251198)
chr2 (166-274)||(3001378-3001486)
chr2 (159-247)||(12517716-12517803)
chr2 (162-274)||(29197341-29197453)
chr2 (201-273)||(42860348-42860420)
chr2 (159-274)||(7798998-7799112)
chr2 (159-274)||(21195638-21195753)
chr2 (116-147)||(21503420-21503451)
chr2 (160-247)||(30359680-30359766)
chr2 (195-249)||(3677351-3677405)
chr2 (159-249)||(19016055-19016145)
chr2 (171-249)||(21213793-21213871)
chr2 (208-273)||(13803495-13803560)
chr2 (181-274)||(19322767-19322860)
chr2 (159-231)||(33582015-33582087)
chr2 (166-206)||(41138386-41138426)
[»] chr7 (41 HSPs)
chr7 (159-268)||(41519227-41519335)
chr7 (159-247)||(37473640-37473728)
chr7 (159-273)||(48771938-48772052)
chr7 (159-273)||(24513797-24513911)
chr7 (159-273)||(43590907-43591021)
chr7 (179-275)||(23552116-23552212)
chr7 (166-250)||(26703148-26703232)
chr7 (166-274)||(42711957-42712065)
chr7 (159-273)||(25590611-25590725)
chr7 (159-275)||(2446306-2446422)
chr7 (181-273)||(26459394-26459486)
chr7 (166-273)||(15137553-15137660)
chr7 (159-274)||(17040974-17041089)
chr7 (201-272)||(22927477-22927548)
chr7 (159-274)||(30579334-30579449)
chr7 (191-257)||(7499918-7499984)
chr7 (159-273)||(20335793-20335907)
chr7 (159-249)||(37085511-37085601)
chr7 (159-274)||(41487361-41487473)
chr7 (107-147)||(14074477-14074517)
chr7 (107-147)||(14384505-14384545)
chr7 (209-273)||(30442488-30442552)
chr7 (181-273)||(39631844-39631936)
chr7 (159-215)||(41975945-41976001)
chr7 (159-275)||(45709670-45709786)
chr7 (159-270)||(15905636-15905746)
chr7 (113-148)||(30406785-30406820)
chr7 (195-274)||(43215183-43215262)
chr7 (167-273)||(5579204-5579310)
chr7 (159-273)||(23301564-23301678)
chr7 (159-273)||(26199509-26199623)
chr7 (161-275)||(38374563-38374677)
chr7 (159-249)||(45228987-45229077)
chr7 (107-148)||(3401067-3401108)
chr7 (166-247)||(5934147-5934228)
chr7 (159-232)||(7309397-7309469)
chr7 (216-273)||(25021354-25021411)
chr7 (208-273)||(37233583-37233648)
chr7 (159-267)||(21877814-21877922)
chr7 (237-273)||(29196905-29196941)
chr7 (159-219)||(48983695-48983755)
[»] chr4 (38 HSPs)
chr4 (159-275)||(7949416-7949532)
chr4 (166-274)||(4185092-4185200)
chr4 (166-246)||(39509097-39509177)
chr4 (166-273)||(19238546-19238653)
chr4 (159-273)||(8030166-8030280)
chr4 (159-273)||(31826609-31826723)
chr4 (159-256)||(30938181-30938278)
chr4 (159-275)||(51250484-51250600)
chr4 (166-273)||(55427169-55427276)
chr4 (159-273)||(28635696-28635810)
chr4 (159-273)||(47044717-47044830)
chr4 (159-273)||(51948480-51948594)
chr4 (166-273)||(37443702-37443806)
chr4 (159-274)||(27965465-27965587)
chr4 (181-273)||(37109335-37109427)
chr4 (159-274)||(37720176-37720291)
chr4 (159-206)||(3606984-3607031)
chr4 (159-274)||(21660106-21660221)
chr4 (159-274)||(21668870-21668985)
chr4 (159-256)||(12793873-12793970)
chr4 (166-218)||(22096577-22096629)
chr4 (159-255)||(23377974-23378070)
chr4 (159-247)||(47386753-47386841)
chr4 (211-274)||(12798683-12798746)
chr4 (171-274)||(21344816-21344918)
chr4 (159-273)||(37274421-37274536)
chr4 (166-256)||(13015444-13015534)
chr4 (107-141)||(30797700-30797734)
chr4 (159-249)||(40283948-40284038)
chr4 (108-145)||(19602969-19603006)
chr4 (208-273)||(31759669-31759734)
chr4 (208-257)||(38869784-38869833)
chr4 (170-247)||(40058954-40059030)
chr4 (166-215)||(49262653-49262702)
chr4 (237-273)||(1730529-1730565)
chr4 (209-273)||(9241037-9241101)
chr4 (159-247)||(32992638-32992726)
chr4 (159-247)||(46295123-46295211)
[»] chr6 (20 HSPs)
chr6 (159-273)||(21418470-21418584)
chr6 (159-256)||(3715469-3715566)
chr6 (159-272)||(6758384-6758497)
chr6 (181-274)||(12188287-12188380)
chr6 (159-274)||(33549103-33549218)
chr6 (159-249)||(24641152-24641242)
chr6 (159-273)||(1056647-1056761)
chr6 (159-223)||(18263890-18263954)
chr6 (107-146)||(8037039-8037078)
chr6 (159-274)||(12234469-12234584)
chr6 (159-226)||(13441104-13441171)
chr6 (159-262)||(24507498-24507601)
chr6 (159-249)||(346555-346644)
chr6 (159-273)||(13227120-13227234)
chr6 (159-257)||(20213057-20213155)
chr6 (159-257)||(22107080-22107178)
chr6 (170-247)||(11448890-11448966)
chr6 (159-252)||(16405106-16405198)
chr6 (112-148)||(22727231-22727267)
chr6 (161-273)||(30127400-30127512)
[»] chr3 (33 HSPs)
chr3 (159-272)||(47454579-47454692)
chr3 (159-262)||(2667873-2667976)
chr3 (159-274)||(36720380-36720495)
chr3 (159-249)||(14339634-14339724)
chr3 (166-270)||(30510168-30510272)
chr3 (162-274)||(32651403-32651514)
chr3 (159-274)||(8051213-8051328)
chr3 (159-274)||(10499071-10499186)
chr3 (159-273)||(4222141-4222255)
chr3 (211-273)||(31788984-31789046)
chr3 (159-273)||(51903840-51903954)
chr3 (159-240)||(52769945-52770026)
chr3 (166-274)||(31520574-31520682)
chr3 (159-273)||(10445101-10445216)
chr3 (159-246)||(44743817-44743904)
chr3 (161-247)||(19716223-19716309)
chr3 (172-273)||(14186648-14186748)
chr3 (181-273)||(40063619-40063711)
chr3 (211-275)||(46518626-46518690)
chr3 (159-262)||(8075089-8075192)
chr3 (166-249)||(28531027-28531110)
chr3 (195-274)||(30311305-30311384)
chr3 (159-249)||(4844473-4844563)
chr3 (159-249)||(4870169-4870259)
chr3 (170-244)||(39041954-39042027)
chr3 (170-247)||(25289816-25289892)
chr3 (109-145)||(8713841-8713877)
chr3 (109-145)||(9065728-9065764)
chr3 (107-147)||(13586033-13586073)
chr3 (109-141)||(22487761-22487793)
chr3 (162-274)||(26871469-26871581)
chr3 (181-273)||(28703388-28703480)
chr3 (159-247)||(54990728-54990816)
[»] scaffold0172 (1 HSPs)
scaffold0172 (159-274)||(15739-15854)
[»] scaffold0258 (1 HSPs)
scaffold0258 (159-273)||(15285-15399)
[»] scaffold0118 (1 HSPs)
scaffold0118 (166-273)||(41602-41709)
[»] scaffold0417 (1 HSPs)
scaffold0417 (166-274)||(10218-10326)
[»] scaffold0074 (1 HSPs)
scaffold0074 (159-249)||(45721-45811)
[»] scaffold0337 (1 HSPs)
scaffold0337 (159-262)||(1764-1867)
[»] scaffold0299 (1 HSPs)
scaffold0299 (195-249)||(11552-11606)
[»] scaffold0115 (1 HSPs)
scaffold0115 (159-221)||(42626-42688)
[»] scaffold0009 (1 HSPs)
scaffold0009 (196-273)||(19846-19923)
[»] scaffold0368 (1 HSPs)
scaffold0368 (159-235)||(14927-15003)
[»] scaffold0107 (1 HSPs)
scaffold0107 (107-147)||(32851-32891)


Alignment Details
Target: chr1 (Bit Score: 191; Significance: 1e-104; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 19 - 282
Target Start/End: Original strand, 25493888 - 25494154
Alignment:
Q  19 cttatatccttattaccggaatctcttttatctcctttccatccctcgtatttttatccatcatgatccatttatggacgaaattcaacgtaccaagtaa 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||    
T  25493888 cttatatccttattaccggaatctcttttatctcctttccatccctcgtatttttatccatcgtgatccatttatggacgaaattcaacgcaacaagtaa 25493987  T
Q  119 taaagtagtaagtttatcgtctccacatg---annnnnnnnnnaagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctc 215  Q
    ||||||||||||||||||||| |||||||              ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25493988 taaagtagtaagtttatcgtcgccacatggattttttttttttaagaagttaaattagcccatctaaattgtcactagggagaagcgaactcgagacctc 25494087  T
Q  216 gaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtttcgtctcca 282  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  25494088 gaggagaagcaaactcctagatcccaagccaataccactaggtcaattcaagtgggtttcgtctcca 25494154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 31794226 - 31794340
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||| |||||| ||| || | ||| ||||||| |||||| |||||| |||| ||||| |  ||||||||||||| |||||||     
T  31794226 aagaagctaaattagcccacccaaattgacaccagagggaatcgaactctagaccttgaggaggagcacactcccaagtcccaagccaataccactaggc 31794325  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  31794326 caacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 50901695 - 50901581
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa-tatcactagg 257  Q
    |||||| ||||||||||||||||||||| |||| | ||||| |||| | |||||||||||||| |||| ||| | || ||||||||||| || |||||||    
T  50901695 aagaagctaaattagcccacctaaattggcact-gagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaattaccactagg 50901597  T
Q  258 tcaactcaagtgggtt 273  Q
     |||| ||||||||||    
T  50901596 ccaacccaagtgggtt 50901581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 24047064 - 24047154
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    ||||||||||||||||| |||||||||| |||| ||||||| |||||| || ||||||||||| |||| ||||| |  || ||||||||||    
T  24047064 aagaagttaaattagccaacctaaattggcactggggagaatcgaacttgaaacctcgaggaggagcacactcccaagtctcaagccaata 24047154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 271
Target Start/End: Original strand, 33700735 - 33700847
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    ||||||||||| || ||| | ||||||| ||| || ||||| |||||  ||||||| |||||| |||| ||||| |||| ||||||||||| |||||||     
T  33700735 aagaagttaaactaacccccttaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggc 33700834  T
Q  259 caactcaagtggg 271  Q
    |||| ||||||||    
T  33700835 caacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 6122908 - 6122793
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||| |||||| |||||| | ||| |||||  ||||||| |||||| |||| ||||| |  ||||||||| ||| |||||||     
T  6122908 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactaggg 6122809  T
Q  259 caactcaagtgggttt 274  Q
    |||| ||| |||||||    
T  6122808 caacccaaatgggttt 6122793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 17410345 - 17410242
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    ||||||||||||||||| | |||||||| ||  | |||||| |||||| |||| ||||||||| | || ||||| ||||||||| |||||| |||||||     
T  17410345 aagaagttaaattagcctatctaaattggcataaaggagaatcgaacttgagatctcgaggaggaccacactcccagatcccaaaccaataccactaggc 17410246  T
Q  259 caac 262  Q
    ||||    
T  17410245 caac 17410242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 21547442 - 21547557
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    ||||||||||| |||||||||||||||| ||  || ||||| |||||  || ||||||||||| ||||  |||| |  ||||||||||||| |||||||     
T  21547442 aagaagttaaactagcccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccactaggc 21547541  T
Q  259 caactcaagtgggttt 274  Q
    |||| ||||| |||||    
T  21547542 caacccaagtcggttt 21547557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 8177166 - 8177260
Alignment:
Q  181 aaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtttc 275  Q
    |||||| ||| || ||||| |||||  || |||| |||||| |||| ||||| |||||||||||||||| ||||||| |||||||| ||||||||    
T  8177166 aaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactaggccaactcaaatgggtttc 8177260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 253
Target Start/End: Complemental strand, 12587383 - 12587290
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcac 253  Q
    |||||| ||||||||||||||||||||| |||  | ||||| |||||  |||||||||||||| |||| ||||  |||||||||| |||||||||    
T  12587383 aagaagctaaattagcccacctaaattg-caccggagagaatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaatatcac 12587290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 27476733 - 27476823
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    |||||| ||||||||||||||||||| | ||| || ||||| | |||| |||| ||||||||| |||| |||||||  |||||||||||||    
T  27476733 aagaagctaaattagcccacctaaatcggcaccagagagaatcaaacttgagatctcgaggaggagcacactcctaagtcccaagccaata 27476823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 52116743 - 52116857
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||||||||| ||||| ||||||||||||  ||||  ||||| | |||||| |||| ||||| |  ||||||||||||| ||| |||     
T  52116743 aagaagctaaattagcccaccttaattggcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggc 52116842  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||| ||||||    
T  52116843 caacccaactgggtt 52116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 273
Target Start/End: Original strand, 19528323 - 19528403
Alignment:
Q  193 gggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    ||||||| |||||  ||||||| |||||| |||| |||| ||||||||||||||||| ||| ||| |||| ||||||||||    
T  19528323 gggagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 40257513 - 40257398
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||| ||||||||| |||||| |||  |  ||||  ||||| |||||||||||||| |||| ||||| || || |||||||||| ||| |||     
T  40257513 aagaagctaaactagcccacccaaattgacaccggatagaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggc 40257414  T
Q  259 caactcaagtgggttt 274  Q
    |||| |||||||||||    
T  40257413 caacccaagtgggttt 40257398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 17745234 - 17745328
Alignment:
Q  175 ccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtg 269  Q
    |||||||||||| ||| || ||||| |||||  |||||||||||||| |||| || |  || ||||||||||||| ||||||| |||| ||||||    
T  17745234 ccacctaaattgacaccagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaagtg 17745328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 1094639 - 1094567
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactc 231  Q
    |||||||||||||||||||||||||||| |||  | ||||| |||| | ||||||||| |||| |||| ||||    
T  1094639 aagaagttaaattagcccacctaaattggcaccggagagaatcgaatttgagacctcgtggaggagcacactc 1094567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 275
Target Start/End: Complemental strand, 6650693 - 6650593
Alignment:
Q  175 ccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggttt 274  Q
    |||||||||||| ||| || ||||| |||||  ||||| | |||||| |||| |||||  ||||||||||||||| ||||||| ||||  || |||||||    
T  6650693 ccacctaaattgacaccagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccactaggccaacctaattgggttt 6650594  T
Q  275 c 275  Q
    |    
T  6650593 c 6650593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 3800020 - 3799953
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagca 226  Q
    |||||| ||||||||||||||||||||| |||||| ||||| |||||  || || |||||||| ||||    
T  3800020 aagaagctaaattagcccacctaaattggcactagagagaatcgaacctgaaacttcgaggaggagca 3799953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 4566626 - 4566547
Alignment:
Q  195 gagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggttt 274  Q
    ||||| |||||  ||||||  |||||| |||| ||||| || | ||||||||||||||||||| |||| |||||||||||    
T  4566626 gagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaatatcactaggccaacccaagtgggttt 4566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 10526937 - 10526842
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcact 254  Q
    |||||| ||||||| |||||| |||||| | | || ||||| ||||   ||||||| |||||| |||||||||| || ||||||||||||| ||||    
T  10526937 aagaagctaaattaacccacccaaattgactccagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccact 10526842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 52336736 - 52336839
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    ||||| ||||||||||||| | |||||| ||| || || || |||||  |||| ||  ||||| |||| ||||| |||||||||||||||| |||||||     
T  52336736 aagaaattaaattagcccatccaaattgacaccagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaataccactaggc 52336835  T
Q  259 caac 262  Q
    ||||    
T  52336836 caac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 147
Target Start/End: Original strand, 11768923 - 11768953
Alignment:
Q  117 aataaagtagtaagtttatcgtctccacatg 147  Q
    |||||||||||||||||||||||||||||||    
T  11768923 aataaagtagtaagtttatcgtctccacatg 11768953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 16893508 - 16893394
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||  |||||| |||  | || || |||||  |||||||||||||| || | ||||| | ||| |||||||||| ||  ||||    
T  16893508 aagaagctaaattagcccactcaaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaataccaacaggt 16893409  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  16893408 caacccaagtgggtt 16893394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 36124947 - 36124857
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    |||||| ||||||||||||||||||||| | ||||| || | | |||| |||||||| ||||| |||| ||||  || ||||||| |||||    
T  36124947 aagaagctaaattagcccacctaaattggcgctaggaaggatcaaacttgagacctcaaggaggagcacactctcaggtcccaagtcaata 36124857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 36371534 - 36371468
Alignment:
Q  209 agacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtttc 275  Q
    |||||| |||||| |||| ||||| || | ||||||||||| ||||||| |||| ||||||||||||    
T  36371534 agaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtttc 36371468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 44961879 - 44961789
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    |||||| |||||||||||||| |||||| |||||| ||||| |||||  ||||||  |||||| |||| |||| || ||| ||||| ||||    
T  44961879 aagaagctaaattagcccacccaaattgacactagagagaatcgaacctgagaccctgaggaggagcacactcttaaatctcaagctaata 44961789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 8077742 - 8077666
Alignment:
Q  170 ttagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa 247  Q
    |||||||||| |||||| ||| || ||||| |||||  ||||||||  |||| |||||||||| ||||||||||||||    
T  8077742 ttagcccaccgaaattggcaccagagagaatcgaacctgagacctct-ggaggagcaaactccaagatcccaagccaa 8077666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 8904506 - 8904413
Alignment:
Q  181 aaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggttt 274  Q
    |||||| ||| || ||||| |||||| ||||||| |||||| |||| ||||  | |||||||| |||||  |||||| |||| |||||||||||    
T  8904506 aaattggcaccagagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggttt 8904413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 9165214 - 9165271
Alignment:
Q  216 gaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    |||||| |||| ||||| || ||||||||||||| ||||||| |||| ||||||||||    
T  9165214 gaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 10334052 - 10334089
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactaggga 196  Q
    |||||||||||||||||||||||||||| || ||||||    
T  10334052 aagaagttaaattagcccacctaaattgacattaggga 10334089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 247
Target Start/End: Original strand, 31605817 - 31605898
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa 247  Q
    |||| ||||||||| |||||| |||  ||||||| |||||| ||||||| |||||| |||| ||| | || |||||||||||    
T  31605817 taaactagcccacccaaattggcaccggggagaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagccaa 31605898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 42949254 - 42949330
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctag 235  Q
    |||||| ||||||||||||| |||||||||||  | ||||| | ||   |||||||||||||| |||| ||||||||    
T  42949254 aagaagctaaattagcccacttaaattgtcaccggagagaatcaaatatgagacctcgaggaggagcacactcctag 42949330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 51814601 - 51814493
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    |||||||||||||| |||||| |||  | ||||| |||||  ||||||| |||||| |||| ||||  ||||| |||| ||||| ||  ||| |||| ||    
T  51814601 taaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaaccca 51814502  T
Q  266 agtgggttt 274  Q
    |||||||||    
T  51814501 agtgggttt 51814493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 16852454 - 16852339
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||| |||||||||||||||| ||||| |||||| |||||  |||||||||||||| |||| ||||| || ||||||||||||| |||||||     
T  16852454 aagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggc 16852355  T
Q  259 caactcaagtgggttt 274  Q
    |||| |||||||||||    
T  16852354 caacccaagtgggttt 16852339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 23874345 - 23874458
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||  ||||||||||||||  ||| | ||| || ||||||||||||| |||||||     
T  23874345 aagaagttaaattagcccacctaaattgtcactaggaagaa-cgaacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggc 23874443  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  23874444 caacccaagtgggtt 23874458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 162 - 274
Target Start/End: Original strand, 19703452 - 19703564
Alignment:
Q  162 aagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaa 261  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||  ||||||| |||||| |||| ||||  || ||||||||||||| ||||||| |||    
T  19703452 aagttaaattagcccaccttaattgacactagggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaa 19703551  T
Q  262 ctcaagtgggttt 274  Q
    | |||||||||||    
T  19703552 cccaagtgggttt 19703564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 968476 - 968362
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||||||||||||||| ||   | ||||| |||||  |||||||||||||| |||| ||||| || ||||||||||||| ||| |||     
T  968476 aagaagctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggc 968377  T
Q  259 caactcaagtgggtt 273  Q
    |||||||||||||||    
T  968376 caactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 166 - 273
Target Start/End: Original strand, 23361618 - 23361725
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    ||||||||||||||||||||| ||| || |||||  ||||  ||||||| |||||| |||| ||||| | |||||||| ||||| ||| |||||||| ||    
T  23361618 taaattagcccacctaaattgacaccagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaaccca 23361717  T
Q  266 agtgggtt 273  Q
    ||||||||    
T  23361718 agtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 6536634 - 6536538
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcacta 255  Q
    |||||| ||||||| ||||||||||||| ||| || |||||  ||||  ||||||| |||||| |||| |||||||| ||||||||||||| |||||    
T  6536634 aagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccacta 6536538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 262
Target Start/End: Original strand, 43594287 - 43594383
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaac 262  Q
    |||||||||||| | |||||| |||||| ||||| |||||  ||||||| |||||| | || | |||||||||| ||||||||||||||||| ||||    
T  43594287 taaattagcccatccaaattgacactagagagaatcgaacctgagaccttgaggaggaacacattcctagatcctaagccaatatcactaggccaac 43594383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 44780076 - 44780192
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||| |||||| |||||| | ||| | |||  ||||||| |||||| |||| ||||| |  ||||||||||||  |||||||     
T  44780076 aagaagctaaattagcccacccaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggc 44780175  T
Q  259 caactcaagtgggtttc 275  Q
    |||| ||||||||||||    
T  44780176 caacccaagtgggtttc 44780192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 11819890 - 11819776
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||| |||||| |||||| | ||| |||||  ||||||| |||||| |||| ||||| |  ||||||||| ||| |||||||     
T  11819890 aagaagctaaattagcccacccaaattgacactagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactaggg 11819791  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||| ||||||    
T  11819790 caacccaaatgggtt 11819776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 18540412 - 18540298
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||| ||| |  |||||| ||| || ||||| |||||  ||||||| ||||||||| | ||||| || ||||||||||||| |||||||     
T  18540412 aagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactaggc 18540313  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  18540312 caacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 26688979 - 26688865
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||| ||||||||| |||||| ||||||| ||||  ||||  ||||||| |||||| |||| ||||| || ||||||||||| | ||| |||     
T  26688979 aagaagctaaactagcccacccaaattgacactaggaagaactgaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggc 26688880  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  26688879 caacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 262
Target Start/End: Original strand, 35690035 - 35690129
Alignment:
Q  168 aattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaac 262  Q
    |||||||| || ||||||| ||| || ||||| |||||  ||||||| |||||| ||||||| || |||||||||||||||| ||||||| ||||    
T  35690035 aattagcctacttaaattgacaccagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaataccactaggccaac 35690129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 271
Target Start/End: Complemental strand, 2203599 - 2203494
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    |||||||||||||| |||||| |||  |||||||  || |  ||||||| |||||| |||| ||||| || ||||||||||||| ||||||| |||| ||    
T  2203599 taaattagcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaaccca 2203500  T
Q  266 agtggg 271  Q
    ||||||    
T  2203499 agtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 28783174 - 28783058
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||| |||||| |||   |||||| |||||  ||||||| |||||| |||| ||||| || || |||||||||| ||| | |     
T  28783174 aagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaagc 28783075  T
Q  259 caactcaagtgggtttc 275  Q
    |||| ||||||||||||    
T  28783074 caacccaagtgggtttc 28783058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 272
Target Start/End: Original strand, 29858018 - 29858124
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    ||||||||||||||||||||| |||   || ||| |||||  |||||||||||||| |||| |||||  | ||||||||||||| ||| ||| |||  ||    
T  29858018 taaattagcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatcca 29858117  T
Q  266 agtgggt 272  Q
    |||||||    
T  29858118 agtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 3305151 - 3305240
Alignment:
Q  160 agaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    ||||| ||||||||||||||||||||| ||| || || || |||| | ||||||| |||||| ||||  |||| ||||||||| ||||||    
T  3305151 agaagataaattagcccacctaaattggcaccagagataatcgaatttgagaccttgaggaggagcacgctcccagatcccaaaccaata 3305240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 271
Target Start/End: Complemental strand, 3624686 - 3624582
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    ||||||||||||||||||||| | |  | ||||| |||||  ||||||| || ||| |||| ||||| || ||||||||||||| ||||||| |||| ||    
T  3624686 taaattagcccacctaaattgacccg-gagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaaccca 3624588  T
Q  266 agtggg 271  Q
    ||||||    
T  3624587 agtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 274
Target Start/End: Complemental strand, 5801119 - 5801046
Alignment:
Q  201 cgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggttt 274  Q
    |||||| ||||| |||||  | |||| ||||||||||||||||| |||| ||| |||||||| |||||||||||    
T  5801119 cgaacttgagacgtcgagacggagcacactcctagatcccaagctaataccaccaggtcaacccaagtgggttt 5801046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 6569791 - 6569847
Alignment:
Q  217 aggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    ||||| |||| ||||| |||||||||||||||||||||||| ||||  |||||||||    
T  6569791 aggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 8485113 - 8484997
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||||||||||||||| |||  | ||||| ||||   |||||||| | ||| |||| ||||  || |||||||| |||| ||| |||     
T  8485113 aagaagctaaattagcccacctaaattggcaccggagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaataccaccaggc 8485014  T
Q  259 caactcaagtgggtttc 275  Q
    |||| ||||||||||||    
T  8485013 caacccaagtgggtttc 8484997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 274
Target Start/End: Complemental strand, 18897265 - 18897165
Alignment:
Q  174 cccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    ||||||||||||| ||| ||| |||| |||||  ||||||| |||||| |||| ||||  || |||||| |||| | ||||||| |||| ||||||||||    
T  18897265 cccacctaaattggcaccaggaagaatcgaacatgagaccttgaggaggagcacactctaaggtcccaaaccaacaccactaggccaacccaagtgggtt 18897166  T
Q  274 t 274  Q
    |    
T  18897165 t 18897165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 146
Target Start/End: Complemental strand, 12957590 - 12957551
Alignment:
Q  107 cgtaccaagtaataaagtagtaagtttatcgtctccacat 146  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  12957590 cgtaacaagtaataaagtagtaagcttatcgtctccacat 12957551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 5264609 - 5264543
Alignment:
Q  208 gagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggttt 274  Q
    |||||||||||||| |||| | ||| || | ||||||||||| ||||||| |||| |||||||||||    
T  5264609 gagacctcgaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgggttt 5264543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 10287589 - 10287499
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    |||||| |||||||||||||||||||||  |  | ||||||  ||||  ||||||||||||||||||| ||| | ||||  ||||||||||    
T  10287589 aagaagataaattagcccacctaaattgatataaaggagaattgaacctgagacctcgaggagaagcacacttccagatttcaagccaata 10287499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 11492035 - 11492125
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    |||||| |||||||||||||| |||||| ||||   ||||| |||||   |||||||||| || |||| ||||| ||||| ||||||||||    
T  11492035 aagaagctaaattagcccacccaaattgacactgaagagaatcgaacctaagacctcgagaaggagcacactcccagatctcaagccaata 11492125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 253
Target Start/End: Original strand, 31087220 - 31087314
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcac 253  Q
    ||||||||||||||||| |  ||||||| |||  | || || |||||  ||||||||||||||  | | ||||| ||||||||||||||||||||    
T  31087220 aagaagttaaattagcctatttaaattgacaccggagataatcgaacctgagacctcgaggagggggatactcccagatcccaagccaatatcac 31087314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 13581847 - 13581880
Alignment:
Q  112 caagtaataaagtagtaagtttatcgtctccaca 145  Q
    ||||||||||||||||||||||||||| ||||||    
T  13581847 caagtaataaagtagtaagtttatcgtttccaca 13581880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 29075895 - 29075781
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||| |||||||| ||| || ||||| |||||  |||| ||||||||| |||| ||||| |||||||||||||||| |||||||     
T  29075895 aagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccactaggc 29075796  T
Q  259 caactcaagtgggtt 273  Q
     ||| ||||||||||    
T  29075795 aaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 16773921 - 16773807
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||||||||||||||| ||  || ||||| |||||  |||||||||||||| |||| ||||| || ||||||| ||||| ||| ||      
T  16773921 aagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagac 16773822  T
Q  259 caactcaagtgggtt 273  Q
    |||||||||||||||    
T  16773821 caactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 17028226 - 17028340
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||||||||||||||| |||||| | ||| | |||  ||||||| |||||| |||| ||||| |  |||||| ||||||  |||||||    
T  17028226 aagaagctaaattagcccacctaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaacccaatacaactaggt 17028325  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  17028326 caacccaagtgggtt 17028340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 21589402 - 21589288
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||| |||||||||||||||| ||| || | ||| |||||  ||||| |||||||| |||| ||||| || ||||||||||||| ||| |||     
T  21589402 aagaagctaaactagcccacctaaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggc 21589303  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  21589302 caacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 274
Target Start/End: Original strand, 30883171 - 30883275
Alignment:
Q  170 ttagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtg 269  Q
    |||||||||| |||||| |||| | |||||  ||||| ||||||| |||||| |||| ||||| || ||||||||||||| ||||||  |||| ||||||    
T  30883171 ttagcccacccaaattgacactggtgagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtg 30883270  T
Q  270 ggttt 274  Q
    |||||    
T  30883271 ggttt 30883275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 28285366 - 28285271
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcact 254  Q
    |||||| |||||||||||||| |||||| ||||||  |||| ||||| ||| |||| |||||| ||||||||| | | ||||| ||||||||||||    
T  28285366 aagaagctaaattagcccacccaaattgacactagaaagaatcgaacccgataccttgaggaggagcaaactcttcggtcccatgccaatatcact 28285271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 84938 - 84851
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagcca 246  Q
    |||||| |||||||||||||| | | || |||  ||||||| |||||| ||||||| |||||| |||| ||||| |||||||||||||    
T  84938 aagaagctaaattagcccacccataatggcaccggggagaatcgaacttgagaccttgaggaggagcacactcccagatcccaagcca 84851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 26078035 - 26078129
Alignment:
Q  181 aaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtttc 275  Q
    |||||| |||||| ||||| |||||  ||||||| || |||||||| ||||| |  |||||| |||||| ||||||| |||| ||||||||||||    
T  26078035 aaattggcactagagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgggtttc 26078129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 21549121 - 21549213
Alignment:
Q  181 aaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    |||||| |||||| || || |||||| ||||| |  ||||| |||| ||||| || ||||||||||||| ||||||| |||| ||||||||||    
T  21549121 aaattggcactagagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 22020831 - 22020939
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    ||||||||||||||||||||  |||| | ||||| ||||   ||||| || ||||| |||| ||||| ||||||||||| |||| ||||| | |||| ||    
T  22020831 taaattagcccacctaaattaacactggagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaataccactatgccaaccca 22020930  T
Q  266 agtgggttt 274  Q
    || ||||||    
T  22020931 agagggttt 22020939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 270
Target Start/End: Complemental strand, 12877807 - 12877696
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||||||||||||||   || || ||||| |||||  ||||| | |||||||| || ||||| | ||||||| |||||  ||||||      
T  12877807 aagaagctaaattagcccacctaaattagtaccagagagaatcgaacctgagacattgaggagaaacacactcccaaatcccaaaccaatgccactagac 12877708  T
Q  259 caactcaagtgg 270  Q
    ||||||||||||    
T  12877707 caactcaagtgg 12877696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 29173604 - 29173529
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactccta 234  Q
    |||||| ||||||||||||||||||||| ||| || || || |||||  || ||||||||||| |||| |||||||    
T  29173604 aagaagctaaattagcccacctaaattgacaccagagataatcgaacctgaaacctcgaggaggagcacactccta 29173529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 30109271 - 30109385
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||||||||||||||  |||  ||| ||| |||||  |||||||| ||||| |||| ||||| || || |||||||||| ||| | |     
T  30109271 aagaagctaaattagcccacctaaattagcac-cgggggaatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagc 30109369  T
Q  259 caactcaagtgggttt 274  Q
    |||| |||||||||||    
T  30109370 caacccaagtgggttt 30109385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 4793042 - 4793088
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaac 205  Q
    |||||| ||||||||||||||||||||| |||| ||||||| |||||    
T  4793042 aagaagctaaattagcccacctaaattggcactggggagaatcgaac 4793088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 30000230 - 30000137
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatca 252  Q
    |||||||||||||| ||||| ||||||| ||  || ||||  |||||  ||||||||||||||  ||| |||||  ||||||||||||| ||||    
T  30000230 aagaagttaaattaacccacttaaattggcatcagagagagtcgaacctgagacctcgaggaggtgcatactcccggatcccaagccaaaatca 30000137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 33709603 - 33709679
Alignment:
Q  170 ttagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa 247  Q
    |||||||||| |||||| ||| || | ||| |||||| ||||||||  |||| |||||||||| ||||||||||||||    
T  33709603 ttagcccaccgaaattggcaccagagggaatcgaacttgagacctct-ggaggagcaaactccaagatcccaagccaa 33709679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 247
Target Start/End: Original strand, 2331950 - 2332037
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa 247  Q
    ||||||||||||||||||||  |||||| || ||||||||| | |||  ||||||| ||| | || || ||||| ||||||||||||||    
T  2331950 aagaagttaaattagcccactcaaattgaca-tagggagaatcaaacatgagaccttgagaaaaaacacactccaagatcccaagccaa 2332037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 17877122 - 17877162
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaa 199  Q
    |||||||||||||||||||||||||||| ||| || |||||    
T  17877122 aagaagttaaattagcccacctaaattgacaccagagagaa 17877162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 273
Target Start/End: Complemental strand, 25627149 - 25627057
Alignment:
Q  181 aaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    |||||| ||| || ||||| |||||  ||||||| |||||| |||| ||||| |  | ||||||||||| ||||||| |||| ||||||||||    
T  25627149 aaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 1435177 - 1435064
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||| |||||| ||| || ||||| |||||| ||||||| ||||||||||| ||||||| ||||||||||| || ||||| |     
T  1435177 aagaagctaaattagcccacccaaattgacaccagagagaatcgaact-gagaccttgaggagaagcacactcctaaatcccaagccagtaccactatgc 1435079  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  1435078 caacccaagtgggtt 1435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 270
Target Start/End: Original strand, 33962746 - 33962857
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||| |||||||||||| ||||| |||||| ||||  ||||| ||||||||| |||| ||||| || |||||| ||||||||| ||||     
T  33962746 aagaagataaattagtccacctaaattggcactaaggagaatcgaatccgagatctcgaggaggagcacactcccagttcccaaaccaatatcattaggc 33962845  T
Q  259 caactcaagtgg 270  Q
    |||| |||||||    
T  33962846 caacccaagtgg 33962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 166 - 273
Target Start/End: Original strand, 23052492 - 23052599
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    |||||||||||||| ||| || |||||||||||| |||||  ||||||| ||||||||||| ||||| |  ||||||||||||| ||| ||| ||||  |    
T  23052492 taaattagcccacccaaactggcactagggagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaaccta 23052591  T
Q  266 agtgggtt 273  Q
    ||||||||    
T  23052592 agtgggtt 23052599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 276
Target Start/End: Complemental strand, 39715099 - 39714989
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    |||||||||||||||||||||   || ||||||| |||||  |||||||||||||| |||| ||||| || ||||||| ||||| ||| | | |||| ||    
T  39715099 taaattagcccacctaaattggtgctggggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaaccca 39715000  T
Q  266 agtgggtttcg 276  Q
    |||||||||||    
T  39714999 agtgggtttcg 39714989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 29503384 - 29503270
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||| |||||| ||||||| |||  ||||||| |||||  ||||||| |||||| |||| ||||| || |||||| |||||| |||||||     
T  29503384 aagaagctaaatttgcccacttaaattgacacc-gggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggc 29503286  T
Q  259 caactcaagtgggttt 274  Q
    |||| |||||||||||    
T  29503285 caacccaagtgggttt 29503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 37480189 - 37480074
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||| ||||||  ||  ||||||| |||||  ||||||| |||||| |||| ||||  || ||||||||||||| ||| |||     
T  37480189 aagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggc 37480090  T
Q  259 caactcaagtgggttt 274  Q
    |||| |||||||||||    
T  37480089 caacccaagtgggttt 37480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 273
Target Start/End: Original strand, 42327364 - 42327471
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    |||||||||||||| |||||| |||    ||||| |||||  ||||||| |||||| |||| ||||| || ||||||||||||| ||||||| |||| ||    
T  42327364 taaattagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaaccca 42327463  T
Q  266 agtgggtt 273  Q
    ||||||||    
T  42327464 agtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 271
Target Start/End: Original strand, 12086091 - 12086203
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||||||||||||||  |||  | | ||| ||||| |||||||| |||||| |||| ||| | || ||||||||||||| ||| |||     
T  12086091 aagaagctaaattagcccacctaaattagcaccggagggaatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaataccaccaggc 12086190  T
Q  259 caactcaagtggg 271  Q
    ||||| |||||||    
T  12086191 caacttaagtggg 12086203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 25637265 - 25637182
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaa 242  Q
    |||||||||||||||||||||||||||| ||   | ||||| |||||  ||||||||||| || |||| ||||| |||||||||    
T  25637265 aagaagttaaattagcccacctaaattggcatcggagagaaccgaacctgagacctcgagaaggagcacactcccagatcccaa 25637182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 42602668 - 42602553
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||| |||||| |||  | ||||| | |||   |||||| ||| || |||| ||||| || ||||||||||||| |||||||     
T  42602668 aagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactaggc 42602569  T
Q  259 caactcaagtgggttt 274  Q
    |||| |||||||||||    
T  42602568 caacccaagtgggttt 42602553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 11062425 - 11062360
Alignment:
Q  208 gagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    ||||||| ||||||||||| ||||| |  | ||||||||||||||||||| |||| ||||||||||    
T  11062425 gagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgggtt 11062360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 275
Target Start/End: Complemental strand, 11251198 - 11251085
Alignment:
Q  162 aagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaa 261  Q
    ||||||||||||| ||||||||||| ||| || ||||| | |||  ||||||| |||||| |||| ||| | |  ||||||||||||| ||||| | |||    
T  11251198 aagttaaattagcacacctaaattgacaccagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaataccactaagccaa 11251099  T
Q  262 ctcaagtgggtttc 275  Q
    |  |||||||||||    
T  11251098 cctaagtgggtttc 11251085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 3001486 - 3001378
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    ||||||||||||| |||| || ||| || || || |||||  |||| ||| ||||| |||| ||||||||||| |||| ||||| ||||||| |||| ||    
T  3001486 taaattagcccacataaactggcaccagagataatcgaacctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggccaaccca 3001387  T
Q  266 agtgggttt 274  Q
    |||| ||||    
T  3001386 agtgagttt 3001378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 247
Target Start/End: Original strand, 12517716 - 12517803
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa 247  Q
    |||||| |||||||||||||| || ||| ||| |||||||| | |||  ||||||| |||||| |||||||||| || |||||||||||    
T  12517716 aagaagctaaattagcccacccaa-ttggcaccagggagaatcaaacatgagaccttgaggaggagcaaactccaaggtcccaagccaa 12517803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 274
Target Start/End: Original strand, 29197341 - 29197453
Alignment:
Q  162 aagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaa 261  Q
    ||||||||||||||||||||||||| |||  || |||| |||||  ||||| || ||||| |||| ||||| |  ||||||| ||||| ||| | | |||    
T  29197341 aagttaaattagcccacctaaattggcaccgggaagaatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaataccaccaagccaa 29197440  T
Q  262 ctcaagtgggttt 274  Q
    | |||||||||||    
T  29197441 cccaagtgggttt 29197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 273
Target Start/End: Complemental strand, 42860420 - 42860348
Alignment:
Q  201 cgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    |||||| |||||||||||||| |||| ||||| || || |||| ||||||||| ||| |||||||||| ||||    
T  42860420 cgaacttgagacctcgaggaggagcacactcccaggtctcaagtcaatatcaccaggccaactcaagtaggtt 42860348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 7798998 - 7799112
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||| || ||||||| |||| | ||||| ||||   |||| ||||||||| |||| ||||| |  ||||||||||||| ||| |||     
T  7798998 aagaagctaaattagcc-acttaaattggcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccaccagga 7799096  T
Q  259 caactcaagtgggttt 274  Q
    |||| |||||||||||    
T  7799097 caacccaagtgggttt 7799112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 21195638 - 21195753
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||| | |||||| |||||| | ||| |||||  ||||||| |||||| |||| ||||| |  | ||||||| ||| |||||||     
T  21195638 aagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagttccaagcctataccactaggg 21195737  T
Q  259 caactcaagtgggttt 274  Q
    |||| ||| |||||||    
T  21195738 caacccaaatgggttt 21195753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 147
Target Start/End: Original strand, 21503420 - 21503451
Alignment:
Q  116 taataaagtagtaagtttatcgtctccacatg 147  Q
    ||||||||||||||||||||||||||||||||    
T  21503420 taataaagtagtaagtttatcgtctccacatg 21503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 30359766 - 30359680
Alignment:
Q  160 agaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa 247  Q
    ||||| |||| ||||||||| |||||| |||| ||||||| |||| | ||||||| |||||| |||| ||||| || |||||||||||    
T  30359766 agaagctaaactagcccacccaaattggcactggggagaatcgaaat-gagaccttgaggaggagcacactccaaggtcccaagccaa 30359680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 3677351 - 3677405
Alignment:
Q  195 gagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    ||||| ||||||  |||||||||||||||||| |||| ||||||| |||||||||    
T  3677351 gagaatcgaacttaagacctcgaggagaagcatactcttagatcctaagccaata 3677405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 19016145 - 19016055
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    |||||| |||||||||| || ||||||| |||  ||||||| | |||| |||||||||||||| |||| ||||| |  || ||||||||||    
T  19016145 aagaagctaaattagcctacttaaattggcaccggggagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaata 19016055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 249
Target Start/End: Complemental strand, 21213871 - 21213793
Alignment:
Q  171 tagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    |||||||||||||||| |||  ||||||| |||||  |||||||| ||||| | || ||||| || |||||||||||||    
T  21213871 tagcccacctaaattggcaccggggagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaata 21213793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 13803560 - 13803495
Alignment:
Q  208 gagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    ||||||| |||||| |||| |||||||  || ||||||||||||||||| ||||| ||| ||||||    
T  13803560 gagaccttgaggaggagcacactcctaagtctcaagccaatatcactagatcaacccaaatgggtt 13803495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 19322860 - 19322767
Alignment:
Q  181 aaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggttt 274  Q
    |||||| |||||| ||||| | |||  ||||||| || ||| |||| ||||| || |||||| |||||| |||||| ||||| |||||||||||    
T  19322860 aaattggcactagagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccactagatcaacccaagtgggttt 19322767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 33582087 - 33582015
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactc 231  Q
    |||||| |||||||| |||||||||||| || ||| ||||| |||||  |||||||| ||||| |||| ||||    
T  33582087 aagaagctaaattagtccacctaaattgacattagagagaatcgaacctgagacctcaaggaggagcacactc 33582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 41138426 - 41138386
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaact 206  Q
    ||||||||| ||||||||||| |||||||||||| ||||||    
T  41138426 taaattagctcacctaaattgacactagggagaatcgaact 41138386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 268
Target Start/End: Original strand, 41519227 - 41519335
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||||||||||||||| ||| || |||||||||||  ||||||| |||||| |||| ||||||| |||||||| ||||| |||||||     
T  41519227 aagaagctaaattagcccacctaaattgacac-agagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggc 41519325  T
Q  259 caactcaagt 268  Q
    |||| |||||    
T  41519326 caacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 37473728 - 37473640
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa 247  Q
    |||||| ||||||| ||||||||||||| || ||||||||| |||||  |||||||| ||||| |||||||||||||||||||| ||||    
T  37473728 aagaagctaaattaacccacctaaattgacattagggagaatcgaacctgagacctcaaggaggagcaaactcctagatcccaaaccaa 37473640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 48772052 - 48771938
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||||||||||  ||| |||| || |||||  |||||||| ||||| |||| ||||| |||||||||||||||| ||| | |     
T  48772052 aagaagctaaattagcccacctaaattggtacttgggataatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagc 48771953  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  48771952 caacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 24513911 - 24513797
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    ||||||||||||||||||||| |||||| ||  || || || |||||  |||||||| |||||||| | ||||| | ||| |||||||||| |||||||     
T  24513911 aagaagttaaattagcccacccaaattgacatcagtgaaaatcgaacctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggc 24513812  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  24513811 caacccaagtgggtt 24513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 43591021 - 43590907
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||||||||| ||||| |||||||||||| |||||  ||||| | |||||| |||| ||||| |  ||||||||||||| ||| |||     
T  43591021 aagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggc 43590922  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||| ||||||    
T  43590921 caacccaactgggtt 43590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 23552212 - 23552116
Alignment:
Q  179 ctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtttc 275  Q
    |||||||| || ||| ||||| |||||| ||||||| |||||| |||| ||||| || ||||||| ||||| ||||||| |||| ||||||||||||    
T  23552212 ctaaattggcattagagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggtttc 23552116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 26703232 - 26703148
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatat 250  Q
    ||||||||||||||||||||| || |||||| ||  ||||  ||||||||||| || |||| ||||| |||||||||||||||||    
T  26703232 taaattagcccacctaaattggcattagggataaatgaacctgagacctcgagaaggagcacactcccagatcccaagccaatat 26703148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 42712065 - 42711957
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    ||||||||||||||||||||| |||||||||||| |||||  ||||||| |||||| |||| ||||| |  | |||||| |||| ||||| | |||| ||    
T  42712065 taaattagcccacctaaattgacactagggagaatcgaacatgagaccttgaggaggagcacactcccatgtaccaagctaataccactaagccaaccca 42711966  T
Q  266 agtgggttt 274  Q
    |||| ||||    
T  42711965 agtgagttt 42711957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 25590725 - 25590611
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||  |||||| |||    || || ||||| ||||||||||||||| |||| ||||| ||||| |||||||||| ||  ||||    
T  25590725 aagaagctaaattagcccactcaaattgacaccgaagaaaatcgaacccgagacctcgaggaggagcacactcccagatctcaagccaataccaacaggt 25590626  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  25590625 caacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 275
Target Start/End: Complemental strand, 2446422 - 2446306
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||||||||||||| | |||  | ||||| |||||| |||| ||||||||| |||| ||||| |  ||||||||||||| ||  ||      
T  2446422 aagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagac 2446323  T
Q  259 caactcaagtgggtttc 275  Q
    |||| ||||||||||||    
T  2446322 caacccaagtgggtttc 2446306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 26459394 - 26459486
Alignment:
Q  181 aaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    |||||| ||| || ||||| |||||  ||||||| |||||| |||| ||||| || ||||||||||||| ||||||| |||| ||||||||||    
T  26459394 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 273
Target Start/End: Complemental strand, 15137660 - 15137553
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    |||||||||||||| |||||| ||| || ||||| | |||  ||||||| |||||| |||| ||||||| |||||||| || || ||| ||| |||| ||    
T  15137660 taaattagcccacccaaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaaccca 15137561  T
Q  266 agtgggtt 273  Q
    ||||||||    
T  15137560 agtgggtt 15137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 17040974 - 17041089
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||  |||||| |||||| |||| | ||||| |||||  ||||||| |||||| |||| ||| | |||||||||||||||  ||||||      
T  17040974 aagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccactagac 17041073  T
Q  259 caactcaagtgggttt 274  Q
    |||| |||||||||||    
T  17041074 caacccaagtgggttt 17041089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 22927548 - 22927477
Alignment:
Q  201 cgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggt 272  Q
    |||||| |||||||  |||||||||| ||||||||||||||||  |||| ||||||| |||| |||||||||    
T  22927548 cgaactggagacctttaggagaagcacactcctagatcccaagttaataccactaggccaacccaagtgggt 22927477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 30579449 - 30579334
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||||||||||||||| ||| || || || |||||  ||||||| ||||||  | | ||||| || || |||||||||| ||| |||     
T  30579449 aagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggc 30579350  T
Q  259 caactcaagtgggttt 274  Q
    |||| |||||||||||    
T  30579349 caacccaagtgggttt 30579334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 7499918 - 7499984
Alignment:
Q  191 tagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactagg 257  Q
    ||||||||| |||||  |||||||||| ||| |||||||||  || |||||||||||||||||||||    
T  7499918 tagggagaatcgaacctgagacctcgaagaggagcaaactctcaggtcccaagccaatatcactagg 7499984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 20335793 - 20335907
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    ||||||||||||||||||| | |||||| ||   | ||||| |||||  |||||||||||||| |||| ||||| |  ||||||||||||| | ||||      
T  20335793 aagaagttaaattagcccatccaaattgacatcggtgagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctagac 20335892  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  20335893 caacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 37085511 - 37085601
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    |||||||||||||||||||| |||||||  | | ||||||| |||||  || ||||||||||  |||| ||||| | ||||||||||||||    
T  37085511 aagaagttaaattagcccacttaaattggtattggggagaatcgaacctgaaacctcgaggatgagcacactcccaaatcccaagccaata 37085601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 41487473 - 41487361
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||||||||||||||| |||  || |||| |||||  ||||||| |||||||   | ||||| |  ||||||||||||| ||| |||     
T  41487473 aagaagctaaattagcccacctaaattggcaccgggaagaatcgaacctgagaccttgaggaga---acactcccaagtcccaagccaataccaccaggc 41487377  T
Q  259 caactcaagtgggttt 274  Q
    |||| |||||||||||    
T  41487376 caacccaagtgggttt 41487361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 14074517 - 14074477
Alignment:
Q  107 cgtaccaagtaataaagtagtaagtttatcgtctccacatg 147  Q
    |||| ||||||||||||||||||||||||||||| ||||||    
T  14074517 cgtaacaagtaataaagtagtaagtttatcgtcttcacatg 14074477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 14384545 - 14384505
Alignment:
Q  107 cgtaccaagtaataaagtagtaagtttatcgtctccacatg 147  Q
    |||| ||||||||||||||||||||||||||||| ||||||    
T  14384545 cgtaacaagtaataaagtagtaagtttatcgtcttcacatg 14384505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 273
Target Start/End: Complemental strand, 30442552 - 30442488
Alignment:
Q  209 agacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    |||||| |||||| |||||||||| || ||||||||||||| |||| || |||| ||||||||||    
T  30442552 agaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 273
Target Start/End: Complemental strand, 39631936 - 39631844
Alignment:
Q  181 aaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    |||||| ||| || ||||| |||||  ||||||| |||||| |||  ||||| || ||||||||||||| ||||||| |||| ||||||||||    
T  39631936 aaattggcacaagagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 41976001 - 41975945
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctc 215  Q
    |||||| ||||||||||||| ||||||| |||||| ||||| |||||| ||||||||    
T  41976001 aagaagctaaattagcccacttaaattgacactagagagaatcgaacttgagacctc 41975945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 45709670 - 45709786
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||| |||||||||||||||||  |   | || || |||||  |||||||||||||| |||| ||||  ||||||||||| |||| |||||||     
T  45709670 aagaagctaagttagcccacctaaattggtatcggagataatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggc 45709769  T
Q  259 caactcaagtgggtttc 275  Q
    |||| ||| ||||||||    
T  45709770 caacccaaatgggtttc 45709786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 270
Target Start/End: Original strand, 15905636 - 15905746
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||| |||||| |||||| || ||||||||| |||||  |||||||  ||||| |||| ||||| || ||||||||||||| | | |||     
T  15905636 aagaagctaaattaacccacccaaattgacattagggagaatcgaacctgagaccta-aggaggagcacactcccaggtcccaagccaataccgccaggc 15905734  T
Q  259 caactcaagtgg 270  Q
    |||| |||||||    
T  15905735 caacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 148
Target Start/End: Complemental strand, 30406820 - 30406785
Alignment:
Q  113 aagtaataaagtagtaagtttatcgtctccacatga 148  Q
    |||||||||||||||||||| |||||||||||||||    
T  30406820 aagtaataaagtagtaagttaatcgtctccacatga 30406785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 43215262 - 43215183
Alignment:
Q  195 gagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggttt 274  Q
    ||||| |||||  ||||||| |||||| |||| ||||| || ||||||||||||| ||||||  |||| |||||||||||    
T  43215262 gagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggttt 43215183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 273
Target Start/End: Original strand, 5579204 - 5579310
Alignment:
Q  167 aaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaa 266  Q
    |||||| |||||| |||||| |||  ||||||  | |||  ||||||| |||||| |||| ||||| || ||||||||||| | ||| |||||||| |||    
T  5579204 aaattatcccacccaaattggcaccggggagagtcaaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaa 5579303  T
Q  267 gtgggtt 273  Q
    |||||||    
T  5579304 gtgggtt 5579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 23301564 - 23301678
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    ||||||||||||||| ||||  |||||  |||||  ||||| | |||| |||||||| ||||| |||| ||||| |  ||||||| ||||| ||| |||     
T  23301564 aagaagttaaattagtccactcaaattagcactaaagagaatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggc 23301663  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  23301664 caacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 26199623 - 26199509
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||| | ||||||||||| |  ||||||||| |||||  |||| ||| | ||| || | | ||  || ||||||||||||| |||||||     
T  26199623 aagaagctaaattaactcacctaaattggctgtagggagaatcgaacctgagatctcaaagaggagtacattctcaggtcccaagccaataccactaggc 26199524  T
Q  259 caactcaagtgggtt 273  Q
    |||||||||||||||    
T  26199523 caactcaagtgggtt 26199509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 275
Target Start/End: Original strand, 38374563 - 38374677
Alignment:
Q  161 gaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtca 260  Q
    |||| |||| |||||||||||||||| |||  ||||||| |||||   |||||| |||||| |||| ||||  || ||||||||||| | ||| | | ||    
T  38374563 gaagctaaactagcccacctaaattggcaccggggagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccacgcca 38374662  T
Q  261 actcaagtgggtttc 275  Q
    || ||||||||||||    
T  38374663 acccaagtgggtttc 38374677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 45228987 - 45229077
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    |||||| ||||||||||||| ||||||| |||| | ||||| |||||   | ||||| || ||||||| |||||||| |||||| ||||||    
T  45228987 aagaagctaaattagcccacttaaattgacactggagagaatcgaacctaaaacctcaagaagaagcacactcctaggtcccaaaccaata 45229077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 3401108 - 3401067
Alignment:
Q  107 cgtaccaagtaataaagtagtaagtttatcgtctccacatga 148  Q
    |||| |||||||||||||||||| ||||||||||||| ||||    
T  3401108 cgtaacaagtaataaagtagtaattttatcgtctccatatga 3401067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 5934228 - 5934147
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa 247  Q
    |||||||| |||||||||||| ||| || | ||| |||||  || ||||| ||||| |||| ||||| ||||||||||||||    
T  5934228 taaattagtccacctaaattgacaccagagggaatcgaacatgaaacctcaaggaggagcacactcccagatcccaagccaa 5934147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 7309469 - 7309397
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcc 232  Q
    |||||| ||||||||||||| ||||||| |||  | ||||| |||||| |||||||||||||| |||| |||||    
T  7309469 aagaagctaaattagcccacttaaattgacacg-gagagaatcgaacttgagacctcgaggaggagcacactcc 7309397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 25021354 - 25021411
Alignment:
Q  216 gaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    |||||| |||| ||||| || ||||||||||||| ||||||| |||| ||||||||||    
T  25021354 gaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 37233583 - 37233648
Alignment:
Q  208 gagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    |||||||  ||||| |||| ||||| | |||||||||||||||||| | |||||| ||||||||||    
T  37233583 gagaccttaaggaggagcacactcccacatcccaagccaatatcaccaagtcaacccaagtgggtt 37233648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 267
Target Start/End: Complemental strand, 21877922 - 21877814
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    ||||||||||||||||||||  || ||| |||   |||||| |||||  |||||||  ||||| ||||  |||| || ||||||| ||||| |||||||     
T  21877922 aagaagttaaattagcccactcaatttggcaccgtggagaatcgaacgtgagaccttaaggaggagcaccctcccaggtcccaagtcaataccactaggc 21877823  T
Q  259 caactcaag 267  Q
    |||||||||    
T  21877822 caactcaag 21877814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 29196941 - 29196905
Alignment:
Q  237 tcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    |||||| |||||||||||||||||||||| |||||||    
T  29196941 tcccaaaccaatatcactaggtcaactcatgtgggtt 29196905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 48983695 - 48983755
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgagg 219  Q
    ||||||||||||||||||||| |||||| |||||| | ||| |||||  ||||||| ||||    
T  48983695 aagaagttaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgagg 48983755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 7949416 - 7949532
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||||||||||||||| ||| || ||||| |||||  ||||||| |||||| |||| ||||| || ||||||||||||| | |||||     
T  7949416 aagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgctaggc 7949515  T
Q  259 caactcaagtgggtttc 275  Q
    || | ||||||||||||    
T  7949516 cagcccaagtgggtttc 7949532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 4185200 - 4185092
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    ||||||||||||||||||||| |||||||||||| ||| || |||||||||||||| | || |||| ||  |||||| |||||| ||| || |||||  |    
T  4185200 taaattagcccacctaaattgacactagggagaatcgatcttgagacctcgaggaggatcacactcttaagtcccaaaccaataccaccagatcaaccaa 4185101  T
Q  266 agtgggttt 274  Q
    |||||||||    
T  4185100 agtgggttt 4185092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 39509177 - 39509097
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagcca 246  Q
    ||||||| ||||||||||||| |||| ||||||| |||||  |||||||||||||| |||| ||||| |||||||||||||    
T  39509177 taaattaacccacctaaattgccactggggagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 39509097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 166 - 273
Target Start/End: Original strand, 19238546 - 19238653
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    |||||||||||||| ||||||  ||  ||||||| ||||| ||||||||||||||| |||| ||||| |  ||||||||||||| ||| ||| |||| ||    
T  19238546 taaattagcccacccaaattggtaccggggagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaaccca 19238645  T
Q  266 agtgggtt 273  Q
    ||||||||    
T  19238646 agtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 8030166 - 8030280
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||| |||||| |||||| | ||| |||||| ||||||| |||||| |||| ||||| |  ||||||||| ||| |||||||     
T  8030166 aagaagctaaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctataccactaggg 8030265  T
Q  259 caactcaagtgggtt 273  Q
    |||  ||||||||||    
T  8030266 caatccaagtgggtt 8030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 31826723 - 31826609
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||| |||||| |||||  | ||| |||||| ||||||| |||||| |||| ||||  | |||||||||| ||| |||||||     
T  31826723 aagaaggtaaattagcccacccaaattgacactaaagggaatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagcctataccactaggg 31826624  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  31826623 caacccaagtgggtt 31826609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 256
Target Start/End: Original strand, 30938181 - 30938278
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactag 256  Q
    |||||| |||| || ||||||||||||| || | ||||||| |||||  |||||||||||||| |||| ||||| ||||||||| |||||| ||||||    
T  30938181 aagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaataccactag 30938278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 51250484 - 51250600
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||| |||||| |||  | | ||| |||||| |||| || |||| | |||| ||||| |||||||||||||||| ||| |||     
T  51250484 aagaagctaaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggc 51250583  T
Q  259 caactcaagtgggtttc 275  Q
    |||| ||||||||||||    
T  51250584 caacccaagtgggtttc 51250600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 273
Target Start/End: Original strand, 55427169 - 55427276
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    |||||||||||||| |||||| |||   |||||| |||||  ||||||||||| || |||| ||||| || ||||||||||||| ||| ||| |||| ||    
T  55427169 taaattagcccacccaaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaaccca 55427268  T
Q  266 agtgggtt 273  Q
    ||||||||    
T  55427269 agtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 28635810 - 28635696
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||| |||||| ||| || ||||| |||||   ||||||| ||||| |||| ||||| |||||||||| || || ||| |||     
T  28635810 aagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccagga 28635711  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  28635710 caacccaagtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 47044830 - 47044717
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    ||||||||| ||| | |||||||||||| | || ||||||| |||||  |||||||||||||| |||||||||  |||||||||| ||||| ||| |||     
T  47044830 aagaagttatatttgtccacctaaattgacgct-gggagaatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggc 47044732  T
Q  259 caactcaagtgggtt 273  Q
    |||  ||||||||||    
T  47044731 caatccaagtgggtt 47044717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 51948594 - 51948480
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    ||||||||||||||| |||  ||||||| |||| | |||||  ||||  ||||||||||||||  ||| |||||||||||||||| |||||  || |||     
T  51948594 aagaagttaaattagtccatttaaattgacactggagagaattgaacctgagacctcgaggaggggcacactcctagatcccaagtcaatactaccagga 51948495  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  51948494 caacccaagtgggtt 51948480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 273
Target Start/End: Complemental strand, 37443806 - 37443702
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    ||||||||||||| ||||||| ||| || || || |||||  || ||||||||||| |    ||||| |||||||||||||||| |||||||||||| ||    
T  37443806 taaattagcccacataaattggcaccagagataatcgaacatgaaacctcgaggagtac---actcccagatcccaagccaataccactaggtcaaccca 37443710  T
Q  266 agtgggtt 273  Q
    ||||||||    
T  37443709 agtgggtt 37443702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 27965465 - 27965587
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaag-------caaactcctagatcccaagccaatatc 251  Q
    |||||| ||||||||||||| ||||| | || ||| ||||| |||||| |||||||| ||||| ||       || ||||| |||||||||||||||| |    
T  27965465 aagaaggtaaattagcccacttaaatcgacattagagagaatcgaacttgagacctcaaggaggagtccactgcacactcccagatcccaagccaatacc 27965564  T
Q  252 actaggtcaactcaagtgggttt 274  Q
    |||||| |||| |||||||||||    
T  27965565 actaggccaacccaagtgggttt 27965587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 37109335 - 37109427
Alignment:
Q  181 aaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    |||||| ||| || ||||| |||||  ||||||| |||||| |||| ||||| || ||||||||||||| ||||||| |||| ||||||||||    
T  37109335 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 37720176 - 37720291
Alignment:
Q  159 aagaagttaaattagcccacctaaattg-tcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactagg 257  Q
    |||||| ||||||||||||||||||||| || || ||||||| |||||  | ||||| ||||||  ||| ||||| || ||||||||||||| ||| |||    
T  37720176 aagaagctaaattagcccacctaaattgatccct-gggagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacaccagg 37720274  T
Q  258 tcaactcaagtgggttt 274  Q
     |||| |||||||||||    
T  37720275 ccaacccaagtgggttt 37720291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 3606984 - 3607031
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaact 206  Q
    |||||||||||||||||||||||||||| |||||||| ||| ||||||    
T  3606984 aagaagttaaattagcccacctaaattgacactagggggaatcgaact 3607031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 21660106 - 21660221
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||| | |||||||||| |||||| || || |||||| |||||||||||||  |||| ||||| ||||| |||| ||||| ||| ||      
T  21660106 aagaagctaaattagtctacctaaattgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagac 21660205  T
Q  259 caactcaagtgggttt 274  Q
    |||| ||||| |||||    
T  21660206 caacccaagttggttt 21660221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 21668870 - 21668985
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||| | |||||||||| |||||| || || |||||| |||||||||||||  |||| ||||| ||||| |||| ||||| ||| ||      
T  21668870 aagaagctaaattagtctacctaaattgacactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagac 21668969  T
Q  259 caactcaagtgggttt 274  Q
    |||| ||||| |||||    
T  21668970 caacccaagttggttt 21668985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 256
Target Start/End: Original strand, 12793873 - 12793970
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactag 256  Q
    |||||| ||||||||||||||||||||| ||| || ||||| ||||||  | || ||| |||  |||| ||||  |||||| ||||||||||||||||    
T  12793873 aagaagctaaattagcccacctaaattggcaccagagagaatcgaacttaatacttcgtggaagagcacactcacagatccgaagccaatatcactag 12793970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 22096577 - 22096629
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgag 218  Q
    ||||||||||||| ||||||| |||||||||||| |||||  |||||||||||    
T  22096577 taaattagcccacttaaattggcactagggagaatcgaacctgagacctcgag 22096629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 23378070 - 23377974
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcacta 255  Q
    |||||| |||| |||||| |  |||||| |||||| ||||| |||||  ||||||| |||||| |||| ||||| || ||||||||||||| |||||    
T  23378070 aagaagctaaactagccccctcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataacacta 23377974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 247
Target Start/End: Original strand, 47386753 - 47386841
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa 247  Q
    |||||| ||||||||||||||||||||| |||||| |||||  ||||  |||||||| || ||||||  ||||  ||||||| ||||||    
T  47386753 aagaagctaaattagcccacctaaattgacactagagagaattgaacctgagacctcaagaagaagcgcactctcagatccctagccaa 47386841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 274
Target Start/End: Complemental strand, 12798746 - 12798683
Alignment:
Q  211 acctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggttt 274  Q
    ||||||||||| |||| ||||| ||||| ||| |||||| |||| ||||||| |||||||||||    
T  12798746 acctcgaggagcagcacactcccagatctcaaaccaataccactcggtcaacccaagtgggttt 12798683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 274
Target Start/End: Complemental strand, 21344918 - 21344816
Alignment:
Q  171 tagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgg 270  Q
    |||||||||||||||| |||| |||||||  ||||  ||||||| || ||| |||| ||||| || ||||||||||| ||||  ||| |||| |||||||    
T  21344918 tagcccacctaaattgacactggggagaattgaacatgagaccttga-gaggagcacactccaaggtcccaagccaacatcatcaggccaacccaagtgg 21344820  T
Q  271 gttt 274  Q
    ||||    
T  21344819 gttt 21344816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 37274421 - 37274536
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa-tatcactagg 257  Q
    |||||| ||||||||||||| ||||||  ||| || ||||| |||||   |||||| |||||| |||| ||||| || ||||||||||| ||  ||||||    
T  37274421 aagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaattacgactagg 37274520  T
Q  258 tcaactcaagtgggtt 273  Q
     |||| ||||||||||    
T  37274521 ccaacccaagtgggtt 37274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 256
Target Start/End: Complemental strand, 13015534 - 13015444
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactag 256  Q
    ||||||| ||||||||||||| |||  | ||||| |||||  ||||| |||||||| |||| ||||| |  ||||||||||||| ||||||    
T  13015534 taaattaacccacctaaattgacacctgagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaataccactag 13015444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 141
Target Start/End: Complemental strand, 30797734 - 30797700
Alignment:
Q  107 cgtaccaagtaataaagtagtaagtttatcgtctc 141  Q
    |||| ||||||||||||||||||||||||||||||    
T  30797734 cgtaacaagtaataaagtagtaagtttatcgtctc 30797700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 40283948 - 40284038
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    |||||||||||||||||||||||||||| ||| | | |||| | |||   |||||| ||||||| ||| ||||| |  |||||||||||||    
T  40283948 aagaagttaaattagcccacctaaattggcaccaagcagaatcaaaccttagaccttgaggagatgcacactcccaagtcccaagccaata 40284038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 145
Target Start/End: Complemental strand, 19603006 - 19602969
Alignment:
Q  108 gtaccaagtaataaagtagtaagtttatcgtctccaca 145  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  19603006 gtaccaagtaataaagcagtaagttaatcgtctccaca 19602969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 31759669 - 31759734
Alignment:
Q  208 gagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    ||||||| |||||| |||| ||||| |  ||||||||||||| |||||| ||||| ||||||||||    
T  31759669 gagaccttgaggaggagcacactcccaagtcccaagccaataccactagatcaacccaagtgggtt 31759734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 38869833 - 38869784
Alignment:
Q  208 gagacctcgaggagaagcaaactcctagatcccaagccaatatcactagg 257  Q
    ||||||| |||||| |||| ||||| |||||||||||||||| |||||||    
T  38869833 gagaccttgaggaggagcacactcccagatcccaagccaataccactagg 38869784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 40058954 - 40059030
Alignment:
Q  170 ttagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa 247  Q
    |||||||||| |||||| ||| || ||||| |||||  |||||||| || || |||||||||| ||||||||||||||    
T  40058954 ttagcccaccgaaattggcaccagagagaatcgaacctgagacctctag-aggagcaaactccaagatcccaagccaa 40059030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 49262653 - 49262702
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctc 215  Q
    ||||||||||||||||||||| |||| ||||||| |||||  ||||||||    
T  49262653 taaattagcccacctaaattggcactggggagaatcgaacctgagacctc 49262702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 1730529 - 1730565
Alignment:
Q  237 tcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  1730529 tcccaagccaataccactaggtcaacccaagtgggtt 1730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 273
Target Start/End: Original strand, 9241037 - 9241101
Alignment:
Q  209 agacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    |||||||||| || |||| ||| | |||||||||||||||| ||| ||| |||| ||||||||||    
T  9241037 agacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggtt 9241101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 32992726 - 32992638
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa 247  Q
    |||||| |||| ||| ||||  |||||| |||  ||||||| |||||| ||||||| |||||| |||| ||||| || |||||||||||    
T  32992726 aagaagctaaactagtccactcaaattgacaccggggagaatcgaacttgagaccttgaggaggagcacactccaaggtcccaagccaa 32992638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 46295211 - 46295123
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa 247  Q
    |||||| |||| ||||||||| |||||| |||  ||||||| |||||  ||||||| |||||| |||| ||||| |  |||||||||||    
T  46295211 aagaagctaaactagcccacccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaa 46295123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 7e-18; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 21418584 - 21418470
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||||||||| ||||| |||||||||||| |||||| ||||| | |||||| |||| ||||| |  ||||||||||||| ||| |||     
T  21418584 aagaagctaaattagcccaccttaattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaataccaccaggc 21418485  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||| ||||||    
T  21418484 caacccaactgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 256
Target Start/End: Complemental strand, 3715566 - 3715469
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactag 256  Q
    |||||| ||||| ||||||||||||||| |||| | ||||| |||||| |||||||||| |||||||| ||||| ||||| |||| ||||| ||||||    
T  3715566 aagaagctaaatcagcccacctaaattgacactggagagaatcgaacttgagacctcgacgagaagcatactcccagatctcaagtcaataccactag 3715469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 272
Target Start/End: Original strand, 6758384 - 6758497
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||| |||||||||||||| ||| || ||||| ||| || |||||||||||| | |||| ||||| | |||| ||||||||| ||| |||     
T  6758384 aagaagctaaatttgcccacctaaattgacaccagagagaatcgatcttgagacctcgaggtggagcacactcccaaatcctaagccaataccaccaggc 6758483  T
Q  259 caactcaagtgggt 272  Q
    |||| |||||||||    
T  6758484 caacacaagtgggt 6758497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 12188287 - 12188380
Alignment:
Q  181 aaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggttt 274  Q
    |||||| |||||| ||||| |||||| || |||| |||||| |||| ||||| || ||||||||||||| ||||||| |||| |||||||||||    
T  12188287 aaattggcactagagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 12188380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 33549218 - 33549103
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||| ||||||||||| ||   | ||||| |||||  |||||||||||||| |||| ||||| || ||||||||||||| ||| ||      
T  33549218 aagaagctaaattagctcacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagac 33549119  T
Q  259 caactcaagtgggttt 274  Q
    |||| |||||||||||    
T  33549118 caacccaagtgggttt 33549103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 24641152 - 24641242
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    |||||||||||||||||||||||||||| || |  |||||| |||||   | ||||||||||| |||| ||||| |||||||||| |||||    
T  24641152 aagaagttaaattagcccacctaaattggcagtgaggagaatcgaaccttaaacctcgaggaggagcacactcccagatcccaagtcaata 24641242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 1056647 - 1056761
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||| ||||||||| ||| ||| || ||||| ||||||  | |||| |||||  |||| ||||| |  ||||| ||||||| ||||||||    
T  1056647 aagaagctaaattaacccacctaacttggcaccagagagaatcgaacttaaaaccttgaggatgagcatactcccaagtcccaggccaataccactaggt 1056746  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  1056747 caacccaagtgggtt 1056761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 18263954 - 18263890
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaa 223  Q
    |||||| ||||||||||||||||||||| |||| ||||||| |||||  | |||||| |||||||    
T  18263954 aagaagctaaattagcccacctaaattggcactggggagaatcgaacctgggacctcaaggagaa 18263890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 146
Target Start/End: Complemental strand, 8037078 - 8037039
Alignment:
Q  107 cgtaccaagtaataaagtagtaagtttatcgtctccacat 146  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  8037078 cgtaacaagtaataaagtagtaagtttaccgtctccacat 8037039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 12234469 - 12234584
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||| |||| |||||||| |||| | ||||| |||||  |||||||||||  | |||| ||||| || ||||||| ||||| ||| |||     
T  12234469 aagaagctaaattatcccatctaaattgacactggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggc 12234568  T
Q  259 caactcaagtgggttt 274  Q
    ||||  ||||||||||    
T  12234569 caacctaagtgggttt 12234584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 13441171 - 13441104
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagca 226  Q
    |||||||||||||||||||| ||||||| ||||  | |||| |||||| ||||||||| |||| ||||    
T  13441171 aagaagttaaattagcccacttaaattggcactgagaagaatcgaacttgagacctcgtggaggagca 13441104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 24507498 - 24507601
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    ||||||||||| || |||||||||||||  ||  | |||||  |||| | |||||| |||||| |||||||||| || ||||||||||| | |||||||     
T  24507498 aagaagttaaactaacccacctaaattgataccggagagaattgaaccctagaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggc 24507597  T
Q  259 caac 262  Q
    ||||    
T  24507598 caac 24507601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 346644 - 346555
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    |||||| |||||||||| || ||||||| |||  | ||||| |||||  ||||||||||||||||||| ||||| || ||||||| |||||    
T  346644 aagaagataaattagcctacttaaattgacacgggtgagaatcgaacatgagacctcgaggagaagcacactcc-aggtcccaagtcaata 346555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 13227120 - 13227234
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    ||||||||||||| ||||||||||| || ||   | ||||| |||||| ||||| |||||||| |||| ||||| ||||| ||  |||||| |||  ||     
T  13227120 aagaagttaaattggcccacctaaactgacatatgagagaatcgaacttgagacttcgaggaggagcacactcccagatctcataccaataccacatggc 13227219  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  13227220 caacccaagtgggtt 13227234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 257
Target Start/End: Complemental strand, 20213155 - 20213057
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactagg 257  Q
    |||||| |||||||||||||| |||||| |||||| | ||| |||||  ||||| | |||||| |||| ||||| || ||||||||  ||| |||||||    
T  20213155 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccactagg 20213057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 257
Target Start/End: Complemental strand, 22107178 - 22107080
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactagg 257  Q
    |||||| |||||||||||||| |||||| |||||| | ||| |||||  ||||| | |||||| |||| ||||| || ||||||||  ||| |||||||    
T  22107178 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagcgtataccactagg 22107080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 11448966 - 11448890
Alignment:
Q  170 ttagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa 247  Q
    |||||||||| |||||| ||| || ||||| |||||  ||||||||  |||| |||||||||| ||||||||||||||    
T  11448966 ttagcccaccgaaattggcaccagagagaatcgaacctgagacctct-ggaggagcaaactccaagatcccaagccaa 11448890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 16405198 - 16405106
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatca 252  Q
    |||||| |||||||| | |||||||||| |||  | ||||| ||||   ||||||||||||||||||| ||||| || |||||| |||||||||    
T  16405198 aagaagctaaattagtc-acctaaattgacacaggtgagaatcgaaactgagacctcgaggagaagcacactcccaggtcccaaaccaatatca 16405106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 148
Target Start/End: Complemental strand, 22727267 - 22727231
Alignment:
Q  112 caagtaataaagtagtaagtttatcgtctccacatga 148  Q
    |||||||||||||||||| |||||||||| |||||||    
T  22727267 caagtaataaagtagtaaatttatcgtctgcacatga 22727231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 30127512 - 30127400
Alignment:
Q  161 gaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtca 260  Q
    |||| ||||||| || |||||||||| |||  |  |||| |||||  |||||||||| ||| |||| ||||| ||| |||||||||||| ||| ||  ||    
T  30127512 gaagctaaattaacctacctaaattggcaccggaaagaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagacca 30127413  T
Q  261 actcaagtgggtt 273  Q
    || ||||||||||    
T  30127412 acccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 272
Target Start/End: Original strand, 47454579 - 47454692
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||| || ||||||||||||| || | ||||||| |||||  |||||||||||||| |||| ||||| ||||| |||||||||| ||||||      
T  47454579 aagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccactagaa 47454678  T
Q  259 caactcaagtgggt 272  Q
    |||| |||||||||    
T  47454679 caacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 2667976 - 2667873
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||| |||||||||||||||| |||||| || || |||||  |||||||||||||  |||| ||||| |||||||||||||||| ||| |||     
T  2667976 aagaagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccaccaggc 2667877  T
Q  259 caac 262  Q
    ||||    
T  2667876 caac 2667873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 36720495 - 36720380
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||  ||||||||||||||| |||||| ||||| |||||  || ||||||||||| |||| ||||| | |||||||||||||| ||| ||      
T  36720495 aagaagctaaaccagcccacctaaattgacactagagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagac 36720396  T
Q  259 caactcaagtgggttt 274  Q
    |||| |||||||||||    
T  36720395 caacccaagtgggttt 36720380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 14339724 - 14339634
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    |||||| ||||||||||||||| ||||| |||||||||||| |||||  ||||| | |||||| |||| ||||| | ||||||||||||||    
T  14339724 aagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaata 14339634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 270
Target Start/End: Original strand, 30510168 - 30510272
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    ||||||||||||| || |||| |||||| ||||| |||||  ||||||||||| || |||| |||||||| |||||||||| || ||| ||| |||| ||    
T  30510168 taaattagcccacttagattgacactagagagaatcgaacctgagacctcgagaaggagcatactcctaggtcccaagccagtaccaccaggacaaccca 30510267  T
Q  266 agtgg 270  Q
    |||||    
T  30510268 agtgg 30510272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 274
Target Start/End: Original strand, 32651403 - 32651514
Alignment:
Q  162 aagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaa 261  Q
    |||||||| ||||||| |||||||| |||||| ||||| ||||   |||| || |||||| |||| ||||| || ||||||||||||| ||||||| |||    
T  32651403 aagttaaactagcccatctaaattgacactagagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaataccactaggccaa 32651502  T
Q  262 ctcaagtgggttt 274  Q
    || ||||||||||    
T  32651503 ct-aagtgggttt 32651514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 8051328 - 8051213
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||  |||||| |||||||| |||  | | ||| |||||| ||||||||||||||||||| ||| | || ||||||||||||| ||| |||     
T  8051328 aagaagctaaacgagcccaactaaattggcaccggagggaatcgaacttgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggc 8051229  T
Q  259 caactcaagtgggttt 274  Q
    |||| |||||||||||    
T  8051228 caacccaagtgggttt 8051213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 10499071 - 10499186
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||| |||||| ||   | ||||| |||||  |||||||| ||||  |||| ||||| |||||||||||||||| ||| |||     
T  10499071 aagaagctaaattagcccacccaaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggc 10499170  T
Q  259 caactcaagtgggttt 274  Q
    |||| |||||||||||    
T  10499171 caacccaagtgggttt 10499186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 4222255 - 4222141
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    ||||||||||| || | ||||||||||| ||| || ||||| |||||   |||| | |||||| |||| ||||| |||||||||||||||| ||||| |     
T  4222255 aagaagttaaactaactcacctaaattgacaccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagc 4222156  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  4222155 caacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 31788984 - 31789046
Alignment:
Q  211 acctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    ||||||||||| |||| ||||| |||||||||||||||| ||||||| |||| ||||||||||    
T  31788984 acctcgaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 51903840 - 51903954
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||  |||||| |||  | ||||| |||||  |||||| ||||||| |||| ||||| |||||||||||||||| ||  ||||    
T  51903840 aagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaataccaacaggt 51903939  T
Q  259 caactcaagtgggtt 273  Q
    |||| || |||||||    
T  51903940 caacccaggtgggtt 51903954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 52769945 - 52770026
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatccc 240  Q
    |||||| ||||||||||||||||||||| |||||  ||||| |||||  |||||||| ||||| |||| ||||| |||||||    
T  52769945 aagaagctaaattagcccacctaaattgacactaaagagaatcgaacctgagacctcaaggaggagcacactcccagatccc 52770026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 31520574 - 31520682
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    |||||||||||||  |||||| |||| | ||||| | |||   ||||||||||||| |||| ||||| |||||||||||||||  ||| ||| |||| ||    
T  31520574 taaattagcccactcaaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaaccca 31520673  T
Q  266 agtgggttt 274  Q
    |||||||||    
T  31520674 agtgggttt 31520682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 10445101 - 10445216
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa-tatcactagg 257  Q
    |||||| |||||||||||||  |||||  ||| || ||||| |||||  |||||||||||||| |||| ||||| || ||||||||||| |  |||||||    
T  10445101 aagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaattgccactagg 10445200  T
Q  258 tcaactcaagtgggtt 273  Q
     |||| ||||||||||    
T  10445201 ccaacccaagtgggtt 10445216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 44743817 - 44743904
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagcca 246  Q
    |||||| ||||||| |||||| |||||| |||| | || || |||||  |||||||||||||| |||| ||||| |||||||||||||    
T  44743817 aagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 44743904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 19716309 - 19716223
Alignment:
Q  161 gaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa 247  Q
    |||| |||||||||||||| ||||||||||  ||||||| |||||  ||||||| |||||| |||| |||||  | |||||||||||    
T  19716309 gaagctaaattagcccacccaaattgtcaccggggagaatcgaaccagagaccttgaggaggagcacactccatggtcccaagccaa 19716223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 273
Target Start/End: Complemental strand, 14186748 - 14186648
Alignment:
Q  172 agcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtggg 271  Q
    ||||||||||||||| |||  | ||||| |||||  ||||||| |||||| |||| ||||| || ||||||| ||||| ||||||| |||| ||||||||    
T  14186748 agcccacctaaattgacaccggagagaatcgaacctgagaccttgaggaggagcacactcc-aggtcccaagacaataccactaggccaacccaagtggg 14186650  T
Q  272 tt 273  Q
    ||    
T  14186649 tt 14186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 273
Target Start/End: Complemental strand, 40063711 - 40063619
Alignment:
Q  181 aaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    |||||| |||| | ||||| |||||| |||||||  ||||| |||| ||||  ||||||||||||||||  |||| |||||| ||||||||||    
T  40063711 aaattggcactggagagaatcgaacttgagaccttaaggaggagcatactctcagatcccaagccaatactactaagtcaacccaagtgggtt 40063619  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 46518690 - 46518626
Alignment:
Q  211 acctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtttc 275  Q
    |||| |||||| |||| ||||| |||||||||||||||| ||||| | |||| ||||||||||||    
T  46518690 accttgaggaggagcacactcccagatcccaagccaataccactatgccaacccaagtgggtttc 46518626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 8075089 - 8075192
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||| |||||| |||||| | ||| |||||  || |||| |||||| |||| ||||| |  ||||||||| ||| |||||||     
T  8075089 aagaagctaaattagcccacccaaattgacactagagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcctataccactaggg 8075188  T
Q  259 caac 262  Q
    ||||    
T  8075189 caac 8075192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 28531027 - 28531110
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    |||||||||||||| |||||| ||| || |||||  || |   ||||||||||||| |||| ||||| ||||||||||||||||    
T  28531027 taaattagcccacccaaattgacaccagagagaattgagcctaagacctcgaggaggagcatactcccagatcccaagccaata 28531110  T

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Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 30311384 - 30311305
Alignment:
Q  195 gagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggttt 274  Q
    ||||| |||||  ||||||| |||||| |||| ||||| |||||||||||| ||| ||||||| |||| || ||||||||    
T  30311384 gagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggttt 30311305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 4844473 - 4844563
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    |||||| |||||||||||||  |||||| |||  | ||||| ||| |  |||||||||||||| |||| ||||| |||||||||| |||||    
T  4844473 aagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaata 4844563  T

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Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 4870169 - 4870259
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    |||||| |||||||||||||  |||||| |||  | ||||| ||| |  |||||||||||||| |||| ||||| |||||||||| |||||    
T  4870169 aagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaata 4870259  T

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Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 39041954 - 39042027
Alignment:
Q  170 ttagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagc 244  Q
    |||||||||| |||||| ||| || ||||| |||||| ||||||||  |||| |||||||||| |||||||||||    
T  39041954 ttagcccaccgaaattggcaccagagagaatcgaacttgagacctct-ggaggagcaaactccaagatcccaagc 39042027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 25289816 - 25289892
Alignment:
Q  170 ttagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa 247  Q
    |||||||||| |||||| |||||| | ||| |||||  ||||||||  |||| |||||||||| ||||||||||||||    
T  25289816 ttagcccaccgaaattggcactagagggaatcgaacctgagacctct-ggaggagcaaactccaagatcccaagccaa 25289892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 145
Target Start/End: Original strand, 8713841 - 8713877
Alignment:
Q  109 taccaagtaataaagtagtaagtttatcgtctccaca 145  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  8713841 taccaagtaataaagtagtaagttaatcgtttccaca 8713877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 145
Target Start/End: Original strand, 9065728 - 9065764
Alignment:
Q  109 taccaagtaataaagtagtaagtttatcgtctccaca 145  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  9065728 taccaagtaataaagtagtaagttaatcgtttccaca 9065764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 13586033 - 13586073
Alignment:
Q  107 cgtaccaagtaataaagtagtaagtttatcgtctccacatg 147  Q
    |||| ||| ||||||||||||||||| ||||||||||||||    
T  13586033 cgtatcaaataataaagtagtaagttaatcgtctccacatg 13586073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 22487761 - 22487793
Alignment:
Q  109 taccaagtaataaagtagtaagtttatcgtctc 141  Q
    |||||||||||||||||||||||| ||||||||    
T  22487761 taccaagtaataaagtagtaagttaatcgtctc 22487793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 274
Target Start/End: Original strand, 26871469 - 26871581
Alignment:
Q  162 aagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaa 261  Q
    |||||||||||||||||| |||||| || | || |||| | |||   |||| | |||||| || ||||||| || ||||||||||| | ||| ||| |||    
T  26871469 aagttaaattagcccacccaaattggcattgggtagaatcaaacctcagactttgaggaggagaaaactccaaggtcccaagccaacaccaccaggccaa 26871568  T
Q  262 ctcaagtgggttt 274  Q
    | |||||||||||    
T  26871569 cccaagtgggttt 26871581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 28703388 - 28703480
Alignment:
Q  181 aaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    |||||| ||| || ||||| |||||  ||||||| || ||| |||| ||||| ||||||||||| ||||||||| |  |||| ||||||||||    
T  28703388 aaattggcaccagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgggtt 28703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 54990816 - 54990728
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaa 247  Q
    |||||| ||||||||||||||||||||| ||    |||||| |||||  ||||||| |||||| ||||  |||| || |||||||||||    
T  54990816 aagaagctaaattagcccacctaaattgccatcgaggagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagccaa 54990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 274
Target Start/End: Original strand, 15739 - 15854
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| |||||||||||||| |||||| |||   |||||| | |||| ||||||| |||||| |||| ||||| | |||||||||||||| ||| |||     
T  15739 aagaagctaaattagcccacccaaattggcaccgcggagaatcaaacttgagaccttgaggaggagcatactccaaaatcccaagccaataccaccaggc 15838  T
Q  259 caactcaagtgggttt 274  Q
    ||||| ||||||||||    
T  15839 caacttaagtgggttt 15854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 15285 - 15399
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    |||||| ||||||||||||||||||||| ||   | ||||| |||||  |||||||||||||| |||| ||||| || ||||||||||||| ||| ||      
T  15285 aagaagctaaattagcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagac 15384  T
Q  259 caactcaagtgggtt 273  Q
    |||| ||||||||||    
T  15385 caacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 273
Target Start/End: Original strand, 41602 - 41709
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    |||||||||||||| |||||| ||  || |||||  ||||  |||||||||||||| |||| ||||  ||||| |||||||||| ||||||| |||| ||    
T  41602 taaattagcccacccaaattgacatcagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaaccca 41701  T
Q  266 agtgggtt 273  Q
    ||||||||    
T  41702 agtgggtt 41709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 10326 - 10218
Alignment:
Q  166 taaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactca 265  Q
    ||||||||||||| ||||||| || | | ||||| | ||||  |||| ||||||||| ||  ||||| |||||||||||||||||||  ||| |||| ||    
T  10326 taaattagcccacttaaattggcatttgagagaatcaaacttaagacttcgaggagaggcgcactcccagatcccaagccaatatcatcaggccaaccca 10227  T
Q  266 agtgggttt 274  Q
    |||||||||    
T  10226 agtgggttt 10218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 45721 - 45811
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    ||||||||||| || ||||||||||||| ||| || ||||| |||||  |||||||| ||||| | || |||||||| ||||||| |||||    
T  45721 aagaagttaaactaacccacctaaattgacaccagagagaatcgaacatgagacctcaaggaggaacacactcctaggtcccaaggcaata 45811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 1867 - 1764
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggt 258  Q
    ||||||||||| || |||||||||||||  ||  | |||||  |||| | |||||| |||||| |||||||||| || ||||||||||| | |||||||     
T  1867 aagaagttaaactaacccacctaaattgataccggagagaattgaaccctagaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggc 1768  T
Q  259 caac 262  Q
    ||||    
T  1767 caac 1764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 11606 - 11552
Alignment:
Q  195 gagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaata 249  Q
    ||||| |||||  |||||||||||||| |||| ||||| ||||||||||||||||    
T  11606 gagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaata 11552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 42626 - 42688
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggag 221  Q
    |||||||||||||||||||||||||||| ||| |  ||||| |||||| |||| || ||||||    
T  42626 aagaagttaaattagcccacctaaattgacaccatagagaatcgaacttgagatcttgaggag 42688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 19846 - 19923
Alignment:
Q  196 agaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatatcactaggtcaactcaagtgggtt 273  Q
    |||| |||||| |||||||| ||||| |||| ||||| |||||||||||||||| ||  | | ||| |||||||||||    
T  19846 agaatcgaacttgagacctcaaggaggagcagactcccagatcccaagccaataccatcatgccaattcaagtgggtt 19923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 14927 - 15003
Alignment:
Q  159 aagaagttaaattagcccacctaaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctag 235  Q
    |||||| ||||||||||||| |||||||||||  | ||||| | ||   |||||||||||||| |||| ||||||||    
T  14927 aagaagctaaattagcccacttaaattgtcaccggagagaatcaaatatgagacctcgaggaggagcacactcctag 15003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 32891 - 32851
Alignment:
Q  107 cgtaccaagtaataaagtagtaagtttatcgtctccacatg 147  Q
    ||||||||||||||||||||| |||| || |||||||||||    
T  32891 cgtaccaagtaataaagtagttagttaattgtctccacatg 32851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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