View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17644_low_12 (Length: 246)
Name: NF17644_low_12
Description: NF17644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17644_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 8 - 241
Target Start/End: Original strand, 3592686 - 3592919
Alignment:
| Q |
8 |
tgatttgttaacacatggtagtttagtgtctaatgtccataggttagttatttacttggggtgttgtgtttttgatacagattagtaagtgttcttgttc |
107 |
Q |
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| T |
3592686 |
tgatttgttaacacatggtagtttagtttctaatgtccataggttagttatttacttggggtgttgtgtttttgatacagattagtaagtgttcttgttc |
3592785 |
T |
|
| Q |
108 |
tcatatggaacatattatgcagtggtgtatgagtatttggagctgacttattttagtttcagcttcagattcaagcaagagggtctaattaatattaatg |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3592786 |
tcatatggaacatattatgcagtggtgtatgagtatttggagctgacttattttagtttcagcttcagattcaagcaagagggtctaattaatattaatg |
3592885 |
T |
|
| Q |
208 |
taatccactgtgtttacctacctattcctatgtt |
241 |
Q |
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||||||||||||||||||||| |||||||||||| |
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| T |
3592886 |
taatccactgtgtttacctacttattcctatgtt |
3592919 |
T |
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