View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17647_high_32 (Length: 288)
Name: NF17647_high_32
Description: NF17647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17647_high_32 |
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Alignment Details
Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 13 - 270
Target Start/End: Original strand, 41521289 - 41521546
Alignment:
| Q |
13 |
gagatgaatattatggcaagtgcaaacaaagcaactatttctcttttaagttggacccatatctttaatatgagaaagaattataagtagctcacacctc |
112 |
Q |
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| T |
41521289 |
gagaggaatattatggcaagtgcaaacaaagcaactatttctcttttaagttggacccatatctttaatatgagaaagaattataagtagctcacacctc |
41521388 |
T |
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| Q |
113 |
aacctacctctatttcaaagcttactcaccacattttctctaaattcgctttctcttccccaatggacagggaagactctgtccttatacacaatagtct |
212 |
Q |
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| T |
41521389 |
aacctacctctatttcaaagcttactcaccacattttctctaaactcgctttctcttccccaatggacagggaagactctgtccttatacacaatagtct |
41521488 |
T |
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| Q |
213 |
ttgtcttcaaccaaccacttccttgtcttcctacattattgcctcaacctcttctaat |
270 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41521489 |
ttgtcctcaaccaaccacttccttgtcttcctacattattgcctcaacctcttctaat |
41521546 |
T |
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