View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17647_high_41 (Length: 237)
Name: NF17647_high_41
Description: NF17647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17647_high_41 |
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Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 28261695 - 28261915
Alignment:
| Q |
1 |
ttcatatctatattaggtttcaaactgcttatattgctccttcatctcgtgtttctggtcgaggagaactcattattgattcctcaaagattgcatcaaa |
100 |
Q |
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| T |
28261695 |
ttcatatctatattaggtttcaaactgcttatattgctccttcatctcgtgtttctggtcgaggagaactcattattgattcctcaaagattgcatcaaa |
28261794 |
T |
|
| Q |
101 |
ctacatgaaaaaagaactttggtctgatcttgttgcagcactaccacttcctcaggtatattcctgatattcatttttaattatcaatatgaatcatttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28261795 |
ctacatgaaaaaagaactttggtctgatcttgttgcagcactaccacttcctcaggtatattcctgatattcatttttaattatcaatatgaatcatttc |
28261894 |
T |
|
| Q |
201 |
accctcaaagggcatcgtcac |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
28261895 |
accctcaaagggcatcgtcac |
28261915 |
T |
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