View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17647_low_23 (Length: 332)
Name: NF17647_low_23
Description: NF17647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17647_low_23 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 15 - 332
Target Start/End: Complemental strand, 43476103 - 43475786
Alignment:
| Q |
15 |
aattagaaccatacgaaaaggaaatgaccaaaacttgagggcatttgtctaatatgttcaaaaggatttatgaagccttcattttgattaggaaaacaaa |
114 |
Q |
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| T |
43476103 |
aattagaaccatacgaaaaggaaatgaccaaaacttgagggcatttgtccaatacgttcaaaaggatttatgaagccttcattttgattaggaaaacaaa |
43476004 |
T |
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| Q |
115 |
gaaaaataataattttaaaccgttggtagctcaatgatttggggaataaatgcttgaatgttggctctaaaggaccataacaagatgtatttagttacct |
214 |
Q |
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| T |
43476003 |
gaaaaaaaaaatttttaaaccgttggtagctcaatgatttggggaataaatgcttgaatgttggctctaaaggaccataacaagatgtatttagttacct |
43475904 |
T |
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| Q |
215 |
taccataaacttcaaaggggaccattctaaatgcagtgtagaaagggcaatcagatgtcaaatagtaatacacaaatggtttattaaataataaatgaat |
314 |
Q |
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| T |
43475903 |
taccataaacttcaaaggggaccattctaaatgcagtgtagaaagggcaatcagatgtcaaatagtaatacacaaatggtttattaaataataaatgaat |
43475804 |
T |
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| Q |
315 |
tataaaggcattttaaac |
332 |
Q |
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| T |
43475803 |
tataaaggcattttaaac |
43475786 |
T |
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