View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17647_low_6 (Length: 528)

Name: NF17647_low_6
Description: NF17647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17647_low_6
NF17647_low_6
[»] chr5 (13 HSPs)
chr5 (20-269)||(41975594-41975835)
chr5 (322-436)||(41977917-41978031)
chr5 (431-490)||(41978356-41978415)
chr5 (267-317)||(41976916-41976966)
chr5 (430-486)||(27803082-27803138)
chr5 (437-480)||(16585346-16585389)
chr5 (430-480)||(3719104-3719154)
chr5 (430-489)||(8483857-8483916)
chr5 (430-473)||(39055535-39055578)
chr5 (430-479)||(4597435-4597485)
chr5 (436-481)||(5324503-5324548)
chr5 (433-478)||(16585110-16585155)
chr5 (423-479)||(20497231-20497287)
[»] chr3 (6 HSPs)
chr3 (10-269)||(1222426-1222667)
chr3 (430-482)||(39789535-39789587)
chr3 (430-479)||(39963061-39963110)
chr3 (432-480)||(28525590-28525638)
chr3 (430-479)||(37772620-37772669)
chr3 (430-474)||(6720496-6720540)
[»] chr2 (4 HSPs)
chr2 (430-486)||(9163976-9164032)
chr2 (434-478)||(9151165-9151209)
chr2 (430-467)||(12942424-12942461)
chr2 (430-478)||(17257084-17257132)
[»] chr1 (8 HSPs)
chr1 (430-478)||(11229081-11229129)
chr1 (431-479)||(33763692-33763740)
chr1 (429-465)||(34987196-34987232)
chr1 (431-465)||(34993688-34993722)
chr1 (430-472)||(38941155-38941197)
chr1 (431-480)||(10323871-10323920)
chr1 (430-481)||(31686685-31686736)
chr1 (432-465)||(25101905-25101938)
[»] chr7 (5 HSPs)
chr7 (430-478)||(48996777-48996825)
chr7 (430-480)||(30187458-30187509)
chr7 (430-477)||(48411256-48411303)
chr7 (438-478)||(30187703-30187743)
chr7 (438-490)||(39682018-39682069)
[»] chr8 (1 HSPs)
chr8 (430-480)||(40641175-40641225)


Alignment Details
Target: chr5 (Bit Score: 196; Significance: 1e-106; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 20 - 269
Target Start/End: Original strand, 41975594 - 41975835
Alignment:
Q  20 tacacttcaagaaatttgtacttgaagctgcagaatggtaatttttcccataaacacaagtgtatatgaatttacttagctttgaggatcactaactcat 119  Q
    ||||||||||| |||||||   ||||||||||||||||||||||| |||||||||||||||||||||||||||||||     ||||||||||||||||||    
T  41975594 tacacttcaaggaatttgt---tgaagctgcagaatggtaattttgcccataaacacaagtgtatatgaatttactt-----tgaggatcactaactcat 41975685  T
Q  120 catcctctggaagcccctgatgaaagaggacttgtttgcaatctcatcatatctataaaccttctcttggaagttaggtatcacactgaaggcaaatgct 219  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41975686 cctcctctggaagcccctgatgaaagaggacttgtttgcaatctcatcatatctataaaccttctcttggaagtgaggtatcacactgaaggcaaatgct 41975785  T
Q  220 tgatttcaaagcattaagatttgtagagacacaaatcatggcagaagcaa 269  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41975786 tgatttcaaagcattaagatttgtagagacagaaatcatggcagaagcaa 41975835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 322 - 436
Target Start/End: Original strand, 41977917 - 41978031
Alignment:
Q  322 ccaattacctaagtgattctagttggtgactcgtatattgtatcatgcacaagagaatatggtgaagaaactaaactcctacaaatacatgaacatgaat 421  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41977917 ccaattacctaagtgattctagttggtgactcgtatattgtatcatgcacaagagaatatggtgaagaaactaaactcctactaatacatgaacatgaat 41978016  T
Q  422 ttaaaacataacaca 436  Q
    |||||||||||||||    
T  41978017 ttaaaacataacaca 41978031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 431 - 490
Target Start/End: Original strand, 41978356 - 41978415
Alignment:
Q  431 aacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaacgaaccctaaga 490  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41978356 aacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaacgaaccctaaga 41978415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 41976916 - 41976966
Alignment:
Q  267 caaagagaattagagaatttatggctttacgtggatgctgcatccagaagc 317  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41976916 caaagagaagtagagaatttatggctttacgtggatgctgcatccagaagc 41976966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 430 - 486
Target Start/End: Original strand, 27803082 - 27803138
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaacgaaccct 486  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  27803082 taacacaagttttaggaaatgaaaatagaaaatatttttacaaagtaaacaaaccct 27803138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 437 - 480
Target Start/End: Original strand, 16585346 - 16585389
Alignment:
Q  437 aattttaggaaatgaaaatagaaaatgttttaacaaagtaaacg 480  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  16585346 aattttaggaaatgaaaataaaaaatgttttcacaaagtaaacg 16585389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 480
Target Start/End: Complemental strand, 3719154 - 3719104
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaacg 480  Q
    ||||||||||||||||||||||||| |||| ||| ||| ||||||||||||    
T  3719154 taacacaaattttaggaaatgaaaacagaacatgatttcacaaagtaaacg 3719104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 8483916 - 8483857
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaacgaaccctaag 489  Q
    |||||||||||| || |||| ||||||||||||||||| || ||||||||  ||||||||    
T  8483916 taacacaaatttaagaaaataaaaatagaaaatgttttcacgaagtaaacagaccctaag 8483857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 473
Target Start/End: Complemental strand, 39055578 - 39055535
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgttttaacaaa 473  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||    
T  39055578 taacacaaattttaagaaatgaaaatagaaaatgctttcacaaa 39055535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 479
Target Start/End: Complemental strand, 4597485 - 4597435
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatg-ttttaacaaagtaaac 479  Q
    ||||||||||||||| ||| |||||||||||||| |||| |||||||||||    
T  4597485 taacacaaattttagaaaaagaaaatagaaaatgtttttcacaaagtaaac 4597435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 481
Target Start/End: Complemental strand, 5324548 - 5324503
Alignment:
Q  436 aaattttaggaaatgaaaatagaaaatgttttaacaaagtaaacga 481  Q
    ||||||||||||||||||  ||||||||||||  ||||||||||||    
T  5324548 aaattttaggaaatgaaatgagaaaatgttttcccaaagtaaacga 5324503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 478
Target Start/End: Complemental strand, 16585155 - 16585110
Alignment:
Q  433 cacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaa 478  Q
    ||||| |||||||||||||||||||| |||| ||| ||||||||||    
T  16585155 cacaagttttaggaaatgaaaatagagaatgatttcacaaagtaaa 16585110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 479
Target Start/End: Complemental strand, 20497287 - 20497231
Alignment:
Q  423 taaaacataacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaac 479  Q
    |||||| |||||||| ||||| ||||| |||||| ||||| |||| |||||||||||    
T  20497287 taaaacttaacacaacttttaagaaatcaaaataaaaaatattttcacaaagtaaac 20497231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 159; Significance: 2e-84; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 10 - 269
Target Start/End: Complemental strand, 1222667 - 1222426
Alignment:
Q  10 tccaagaatatacacttcaagaaatttgtacttgaagctgcagaatggtaatttttcccataaacacaagtgtatatgaatttacttagctttgaggatc 109  Q
    ||||| ||||||||||||||| |||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||    
T  1222667 tccaataatatacacttcaaggaatttgt---tgaagctgcagaatggtaatttttcccataaacacaagtgtatatgaatttactt-----tgaggatc 1222576  T
Q  110 actaactcatcatcctctggaagcccctgatgaaagaggacttgtttgcaatctcatcatatctataaaccttctcttggaagttaggtatcacactgaa 209  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  1222575 actaactcatcatcctctggaagcccctgttgaaagaggacttgtttgcaatctcatcatatctataaaccttctcttggaagtgaggtatcacaccgaa 1222476  T
Q  210 ggcaaatgcttgatttcaaagcattaagatttgtagagacacaaatcatggcagaagcaa 269  Q
    |||||||||||           |||| |||||||||||||| ||||||||||||||||||    
T  1222475 ggcaaatgctt----------aattaggatttgtagagacagaaatcatggcagaagcaa 1222426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 39789535 - 39789587
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaacgaa 482  Q
    |||||||||||||||| |||||||||||||||| |||| ||||||||||||||    
T  39789535 taacacaaattttaggcaatgaaaatagaaaatattttcacaaagtaaacgaa 39789587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 430 - 479
Target Start/End: Complemental strand, 39963110 - 39963061
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaac 479  Q
    |||||||||||||||||||| |||||| |||||||||| |||||||||||    
T  39963110 taacacaaattttaggaaatcaaaataaaaaatgttttcacaaagtaaac 39963061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 28525590 - 28525638
Alignment:
Q  432 acacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaacg 480  Q
    |||||||||||| ||||||||| |||||||| |||| ||||||||||||    
T  28525590 acacaaattttaagaaatgaaactagaaaatatttttacaaagtaaacg 28525638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 479
Target Start/End: Complemental strand, 37772669 - 37772620
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaac 479  Q
    |||||||||||| |||||||||||| |||||||||  | |||||||||||    
T  37772669 taacacaaatttcaggaaatgaaaacagaaaatgtaatcacaaagtaaac 37772620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 474
Target Start/End: Original strand, 6720496 - 6720540
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgttttaacaaag 474  Q
    ||||||||||||||| | ||||||||| |||||||||| ||||||    
T  6720496 taacacaaattttagaatatgaaaatataaaatgtttttacaaag 6720540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 430 - 486
Target Start/End: Complemental strand, 9164032 - 9163976
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaacgaaccct 486  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||    
T  9164032 taacacaaattttaggaagtgaaaatagaaaatgttttcacaaagtaaacggaccct 9163976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 478
Target Start/End: Complemental strand, 9151209 - 9151165
Alignment:
Q  434 acaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaa 478  Q
    |||||||||||||||||| || |||||||||||| ||||||||||    
T  9151209 acaaattttaggaaatgataacagaaaatgttttcacaaagtaaa 9151165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 467
Target Start/End: Complemental strand, 12942461 - 12942424
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgtttt 467  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  12942461 taacacaaattttaataaatgaaaatagaaaatgtttt 12942424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 478
Target Start/End: Original strand, 17257084 - 17257132
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaa 478  Q
    ||||||||||||||| |||||||||||||| ||||| | ||||| ||||    
T  17257084 taacacaaattttagaaaatgaaaatagaagatgttcttacaaattaaa 17257132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 430 - 478
Target Start/End: Complemental strand, 11229129 - 11229081
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaa 478  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11229129 taacacaaattttaggaaatgaaaatagaaaatgttttcacaaagtaaa 11229081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 431 - 479
Target Start/End: Original strand, 33763692 - 33763740
Alignment:
Q  431 aacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaac 479  Q
    ||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  33763692 aacacaaattttaagaaataaaaatagaaaatgttttcacaaagtaaac 33763740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 429 - 465
Target Start/End: Original strand, 34987196 - 34987232
Alignment:
Q  429 ataacacaaattttaggaaatgaaaatagaaaatgtt 465  Q
    |||||||||||||||||||||||||||||||||||||    
T  34987196 ataacacaaattttaggaaatgaaaatagaaaatgtt 34987232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 465
Target Start/End: Original strand, 34993688 - 34993722
Alignment:
Q  431 aacacaaattttaggaaatgaaaatagaaaatgtt 465  Q
    |||||||||||||||||||||||||||||||||||    
T  34993688 aacacaaattttaggaaatgaaaatagaaaatgtt 34993722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 472
Target Start/End: Complemental strand, 38941197 - 38941155
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgttttaacaa 472  Q
    ||||||| |||||||||||||||||||||||||||||| ||||    
T  38941197 taacacatattttaggaaatgaaaatagaaaatgttttcacaa 38941155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 431 - 480
Target Start/End: Original strand, 10323871 - 10323920
Alignment:
Q  431 aacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaacg 480  Q
    |||||||| ||||||||||||||||||| ||| |||| ||||||||||||    
T  10323871 aacacaaactttaggaaatgaaaatagacaatattttcacaaagtaaacg 10323920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 481
Target Start/End: Complemental strand, 31686736 - 31686685
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaacga 481  Q
    ||||||||||||| ||| |  ||||||||||||||||| |||||||||||||    
T  31686736 taacacaaattttgggagaaaaaaatagaaaatgttttcacaaagtaaacga 31686685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 465
Target Start/End: Complemental strand, 25101938 - 25101905
Alignment:
Q  432 acacaaattttaggaaatgaaaatagaaaatgtt 465  Q
    |||||||||||| |||||||||||||||||||||    
T  25101938 acacaaattttaagaaatgaaaatagaaaatgtt 25101905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 478
Target Start/End: Complemental strand, 48996825 - 48996777
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaa 478  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  48996825 taacacaaattttatgaaatgaaaatagaaaatgttttcataaagtaaa 48996777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 480
Target Start/End: Complemental strand, 30187509 - 30187458
Alignment:
Q  430 taacacaaattttaggaaatgaaaatag-aaaatgttttaacaaagtaaacg 480  Q
    |||||||||||| || |||||||||||| |||||||||| ||||||||||||    
T  30187509 taacacaaatttcagaaaatgaaaatagaaaaatgttttcacaaagtaaacg 30187458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 477
Target Start/End: Complemental strand, 48411303 - 48411256
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaa 477  Q
    |||| |||||||||  |||||||||||||||||||||| |||||||||    
T  48411303 taactcaaattttaaaaaatgaaaatagaaaatgttttcacaaagtaa 48411256  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 438 - 478
Target Start/End: Original strand, 30187703 - 30187743
Alignment:
Q  438 attttaggaaatgaaaatagaaaatgttttaacaaagtaaa 478  Q
    ||||||||||| |||||||||||||||||| | ||||||||    
T  30187703 attttaggaaaggaaaatagaaaatgttttcataaagtaaa 30187743  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 438 - 490
Target Start/End: Original strand, 39682018 - 39682069
Alignment:
Q  438 attttaggaaatgaaaatagaaaatgttttaacaaagtaaacgaaccctaaga 490  Q
    ||||||| ||||||||| | |||||||||| |||||||||||||| |||||||    
T  39682018 attttagaaaatgaaaaaa-aaaatgttttcacaaagtaaacgaagcctaaga 39682069  T

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Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 480
Target Start/End: Original strand, 40641175 - 40641225
Alignment:
Q  430 taacacaaattttaggaaatgaaaatagaaaatgttttaacaaagtaaacg 480  Q
    ||||||||||||||| ||||||||||||||||||||||  |||| ||||||    
T  40641175 taacacaaattttagaaaatgaaaatagaaaatgttttcgcaaaataaacg 40641225  T

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