View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17648_high_7 (Length: 363)

Name: NF17648_high_7
Description: NF17648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17648_high_7
NF17648_high_7
[»] chr2 (61 HSPs)
chr2 (1-349)||(33455748-33456096)
chr2 (33-80)||(884113-884160)
chr2 (33-80)||(3435487-3435534)
chr2 (17-73)||(3008422-3008478)
chr2 (33-81)||(17727459-17727507)
chr2 (32-80)||(27545116-27545164)
chr2 (33-80)||(883906-883953)
chr2 (33-80)||(20998990-20999037)
chr2 (33-80)||(33985772-33985819)
chr2 (33-80)||(34775413-34775460)
chr2 (32-80)||(11969108-11969156)
chr2 (33-80)||(883602-883649)
chr2 (33-80)||(3976472-3976519)
chr2 (199-238)||(7252261-7252300)
chr2 (33-80)||(21214202-21214249)
chr2 (33-80)||(32667239-32667286)
chr2 (33-80)||(40010030-40010077)
chr2 (33-80)||(42768335-42768382)
chr2 (33-80)||(43195840-43195887)
chr2 (33-79)||(93139-93185)
chr2 (192-238)||(3185946-3185992)
chr2 (187-324)||(11064469-11064604)
chr2 (33-74)||(901985-902026)
chr2 (33-78)||(14408047-14408092)
chr2 (19-79)||(22127003-22127064)
chr2 (33-74)||(25286261-25286302)
chr2 (33-77)||(12431957-12432001)
chr2 (33-73)||(25621286-25621326)
chr2 (37-77)||(39108414-39108454)
chr2 (32-79)||(6114461-6114508)
chr2 (37-76)||(16007037-16007076)
chr2 (146-216)||(16419345-16419416)
chr2 (33-80)||(19860093-19860140)
chr2 (33-80)||(23054382-23054429)
chr2 (36-79)||(25441753-25441796)
chr2 (37-80)||(29684067-29684110)
chr2 (33-80)||(30156264-30156311)
chr2 (33-80)||(30160383-30160430)
chr2 (33-80)||(31761188-31761235)
chr2 (33-80)||(31761387-31761434)
chr2 (33-80)||(33985976-33986023)
chr2 (17-79)||(40005410-40005473)
chr2 (32-78)||(14466425-14466471)
chr2 (32-74)||(28895588-28895630)
chr2 (34-80)||(39386726-39386772)
chr2 (36-78)||(44403945-44403987)
chr2 (34-79)||(93737-93782)
chr2 (33-74)||(2333359-2333400)
chr2 (209-238)||(3186347-3186376)
chr2 (194-266)||(4493128-4493198)
chr2 (37-74)||(5424787-5424824)
chr2 (32-73)||(9889319-9889360)
chr2 (39-80)||(21213892-21213933)
chr2 (185-238)||(26237128-26237181)
chr2 (40-77)||(39108279-39108316)
chr2 (36-80)||(12432161-12432205)
chr2 (281-325)||(12931512-12931556)
chr2 (153-216)||(15124725-15124789)
chr2 (153-216)||(16533390-16533454)
chr2 (37-77)||(29676353-29676393)
chr2 (36-80)||(33532740-33532784)
[»] chr5 (68 HSPs)
chr5 (33-80)||(21633518-21633565)
chr5 (33-80)||(21641765-21641812)
chr5 (36-80)||(30330705-30330749)
chr5 (33-80)||(48105-48152)
chr5 (33-80)||(48312-48359)
chr5 (33-80)||(2908770-2908817)
chr5 (33-80)||(13413640-13413687)
chr5 (33-80)||(35526989-35527036)
chr5 (33-80)||(35527275-35527322)
chr5 (33-80)||(37656733-37656780)
chr5 (33-78)||(34457154-34457199)
chr5 (33-77)||(28358036-28358080)
chr5 (33-77)||(38376790-38376834)
chr5 (37-80)||(2908567-2908610)
chr5 (33-80)||(3015622-3015669)
chr5 (33-80)||(3762962-3763009)
chr5 (33-80)||(28156086-28156133)
chr5 (19-74)||(30366674-30366729)
chr5 (33-80)||(37781845-37781892)
chr5 (33-80)||(37995635-37995682)
chr5 (33-80)||(40169042-40169089)
chr5 (32-74)||(1892090-1892132)
chr5 (38-80)||(27760131-27760173)
chr5 (33-79)||(30770065-30770111)
chr5 (19-73)||(31973137-31973191)
chr5 (33-74)||(12965247-12965288)
chr5 (33-74)||(13843759-13843800)
chr5 (33-78)||(34457361-34457406)
chr5 (33-74)||(38131826-38131867)
chr5 (32-80)||(15287109-15287157)
chr5 (193-225)||(31973407-31973439)
chr5 (32-72)||(38658503-38658543)
chr5 (32-80)||(39205664-39205712)
chr5 (33-77)||(43490217-43490261)
chr5 (33-80)||(873697-873744)
chr5 (33-80)||(1028094-1028141)
chr5 (33-80)||(2716602-2716649)
chr5 (33-80)||(3015418-3015465)
chr5 (33-80)||(11632487-11632534)
chr5 (33-72)||(13844077-13844116)
chr5 (37-76)||(24125122-24125161)
chr5 (33-72)||(24918225-24918264)
chr5 (33-72)||(24994133-24994172)
chr5 (33-80)||(38663303-38663350)
chr5 (33-80)||(40168860-40168907)
chr5 (37-79)||(5090900-5090942)
chr5 (113-163)||(14314742-14314792)
chr5 (19-73)||(16275304-16275358)
chr5 (13-59)||(22198982-22199028)
chr5 (34-72)||(29432476-29432514)
chr5 (33-79)||(30758315-30758361)
chr5 (192-238)||(38815678-38815724)
chr5 (32-73)||(904753-904794)
chr5 (32-73)||(4796421-4796462)
chr5 (280-325)||(14256916-14256961)
chr5 (285-330)||(30366614-30366659)
chr5 (33-78)||(30592485-30592530)
chr5 (17-74)||(32337699-32337756)
chr5 (32-73)||(38603912-38603953)
chr5 (36-80)||(395036-395080)
chr5 (32-80)||(9368616-9368664)
chr5 (33-77)||(18914369-18914413)
chr5 (241-322)||(27379186-27379268)
chr5 (186-234)||(27560666-27560714)
chr5 (38-78)||(30870891-30870931)
chr5 (17-77)||(38069571-38069631)
chr5 (32-72)||(39848899-39848939)
chr5 (33-77)||(43490464-43490508)
[»] chr7 (49 HSPs)
chr7 (185-238)||(25000501-25000554)
chr7 (33-80)||(6783094-6783141)
chr7 (33-80)||(23396665-23396712)
chr7 (20-74)||(39164689-39164743)
chr7 (32-79)||(1596850-1596897)
chr7 (33-80)||(1663605-1663652)
chr7 (37-80)||(31374821-31374864)
chr7 (33-80)||(43384281-43384328)
chr7 (46-80)||(9379056-9379090)
chr7 (38-79)||(4454798-4454839)
chr7 (33-74)||(36092393-36092434)
chr7 (33-74)||(41670895-41670936)
chr7 (33-80)||(257268-257315)
chr7 (33-80)||(1661192-1661239)
chr7 (33-80)||(7135244-7135291)
chr7 (33-80)||(7832964-7833011)
chr7 (23-82)||(27821090-27821149)
chr7 (37-80)||(28910088-28910131)
chr7 (33-80)||(29252632-29252679)
chr7 (32-79)||(29469627-29469674)
chr7 (34-73)||(32000880-32000919)
chr7 (37-80)||(37272050-37272093)
chr7 (33-80)||(39808465-39808512)
chr7 (33-80)||(39808598-39808645)
chr7 (33-80)||(40703412-40703459)
chr7 (33-80)||(43288320-43288367)
chr7 (33-80)||(43288588-43288635)
chr7 (35-74)||(48116299-48116338)
chr7 (38-80)||(2232152-2232194)
chr7 (35-77)||(23821363-23821405)
chr7 (34-72)||(27820910-27820948)
chr7 (33-79)||(35866640-35866686)
chr7 (35-73)||(42440876-42440914)
chr7 (17-73)||(6745608-6745665)
chr7 (35-80)||(6782882-6782927)
chr7 (33-74)||(13310426-13310467)
chr7 (36-73)||(14595885-14595922)
chr7 (32-73)||(14596193-14596233)
chr7 (205-238)||(21048690-21048723)
chr7 (37-78)||(30727375-30727416)
chr7 (33-74)||(40137697-40137738)
chr7 (33-74)||(40703653-40703694)
chr7 (32-73)||(41489954-41489995)
chr7 (32-76)||(23839092-23839136)
chr7 (36-80)||(27585312-27585356)
chr7 (153-216)||(33834269-33834333)
chr7 (193-225)||(38963561-38963593)
chr7 (32-80)||(44760507-44760555)
chr7 (32-76)||(44874361-44874405)
[»] chr4 (68 HSPs)
chr4 (133-237)||(49190101-49190206)
chr4 (33-80)||(35399258-35399305)
chr4 (33-80)||(35399417-35399464)
chr4 (33-81)||(28246048-28246096)
chr4 (33-80)||(12016684-12016731)
chr4 (33-80)||(12016892-12016939)
chr4 (33-80)||(28395233-28395280)
chr4 (33-80)||(43943729-43943776)
chr4 (34-80)||(5488423-5488469)
chr4 (33-79)||(31254423-31254469)
chr4 (28-73)||(22823901-22823946)
chr4 (33-81)||(21498586-21498634)
chr4 (36-80)||(25753609-25753653)
chr4 (33-80)||(17077145-17077192)
chr4 (33-80)||(21497684-21497731)
chr4 (33-80)||(21498243-21498290)
chr4 (33-80)||(23018526-23018573)
chr4 (33-80)||(28245844-28245891)
chr4 (33-80)||(29113505-29113552)
chr4 (33-80)||(29669364-29669411)
chr4 (33-80)||(43972411-43972458)
chr4 (33-80)||(45427253-45427300)
chr4 (15-58)||(50830700-50830743)
chr4 (33-80)||(52214671-52214718)
chr4 (33-80)||(53740238-53740285)
chr4 (34-80)||(15665209-15665255)
chr4 (114-266)||(17905186-17905337)
chr4 (33-79)||(27634097-27634143)
chr4 (19-73)||(30490941-30490995)
chr4 (34-80)||(39110773-39110819)
chr4 (34-75)||(6778463-6778504)
chr4 (185-238)||(24001552-24001605)
chr4 (35-80)||(35565134-35565179)
chr4 (33-74)||(36558467-36558508)
chr4 (33-74)||(41176768-41176809)
chr4 (32-73)||(48046420-48046461)
chr4 (33-74)||(50858074-50858115)
chr4 (33-74)||(51470545-51470586)
chr4 (37-77)||(6778681-6778721)
chr4 (36-80)||(27048412-27048456)
chr4 (32-80)||(52827232-52827280)
chr4 (33-80)||(990603-990650)
chr4 (37-80)||(991260-991303)
chr4 (32-79)||(2220983-2221030)
chr4 (33-80)||(13254439-13254486)
chr4 (281-320)||(16874178-16874217)
chr4 (33-80)||(17076941-17076988)
chr4 (33-80)||(18435927-18435974)
chr4 (33-80)||(27048138-27048185)
chr4 (33-80)||(27634327-27634374)
chr4 (33-80)||(29734617-29734664)
chr4 (33-80)||(34206256-34206303)
chr4 (33-80)||(45426937-45426984)
chr4 (33-80)||(51469537-51469584)
chr4 (33-80)||(56511353-56511400)
chr4 (33-79)||(17222668-17222714)
chr4 (33-79)||(27634532-27634578)
chr4 (35-73)||(28496508-28496546)
chr4 (38-80)||(29669684-29669726)
chr4 (39-77)||(39110966-39111004)
chr4 (37-78)||(14945201-14945242)
chr4 (32-73)||(26942872-26942913)
chr4 (197-226)||(38257020-38257049)
chr4 (37-74)||(55253344-55253381)
chr4 (36-80)||(34205997-34206041)
chr4 (153-216)||(40717383-40717447)
chr4 (23-79)||(46676675-46676731)
chr4 (21-65)||(49824626-49824670)
[»] chr8 (42 HSPs)
chr8 (33-80)||(20760661-20760708)
chr8 (15-79)||(30966065-30966129)
chr8 (33-80)||(8559637-8559684)
chr8 (33-80)||(10989035-10989082)
chr8 (33-80)||(10989242-10989289)
chr8 (33-80)||(16454636-16454683)
chr8 (33-80)||(43599367-43599414)
chr8 (32-79)||(45031376-45031423)
chr8 (185-225)||(25972274-25972314)
chr8 (17-73)||(30590511-30590567)
chr8 (32-76)||(45031167-45031211)
chr8 (33-80)||(3183912-3183959)
chr8 (34-73)||(12605634-12605673)
chr8 (33-80)||(15010822-15010869)
chr8 (33-80)||(15011030-15011077)
chr8 (33-80)||(18905912-18905959)
chr8 (33-80)||(21653860-21653907)
chr8 (33-80)||(32931457-32931504)
chr8 (33-80)||(34248133-34248180)
chr8 (33-80)||(34248415-34248462)
chr8 (33-80)||(36997222-36997269)
chr8 (33-80)||(40902394-40902441)
chr8 (33-79)||(7729963-7730009)
chr8 (34-80)||(36993949-36993995)
chr8 (237-330)||(5940024-5940117)
chr8 (19-71)||(26642652-26642704)
chr8 (16-80)||(34621943-34622007)
chr8 (161-220)||(42584744-42584804)
chr8 (45-80)||(4195963-4195998)
chr8 (32-79)||(11232209-11232256)
chr8 (32-79)||(11232444-11232491)
chr8 (34-81)||(35908733-35908780)
chr8 (32-79)||(38475769-38475816)
chr8 (37-80)||(42228827-42228870)
chr8 (33-80)||(43984317-43984364)
chr8 (32-74)||(25972321-25972363)
chr8 (15-79)||(7338709-7338774)
chr8 (35-72)||(21653391-21653428)
chr8 (37-77)||(33435942-33435982)
chr8 (35-71)||(37312908-37312944)
chr8 (35-71)||(37387085-37387121)
chr8 (36-80)||(39588088-39588132)
[»] chr3 (77 HSPs)
chr3 (32-76)||(37058771-37058815)
chr3 (33-80)||(9264087-9264134)
chr3 (33-80)||(9264294-9264341)
chr3 (34-77)||(19820530-19820573)
chr3 (33-80)||(39078772-39078819)
chr3 (33-80)||(40230640-40230687)
chr3 (33-80)||(49477383-49477430)
chr3 (33-80)||(49477590-49477637)
chr3 (33-80)||(50692379-50692426)
chr3 (33-80)||(50692582-50692629)
chr3 (33-80)||(51642429-51642476)
chr3 (33-80)||(51642636-51642683)
chr3 (19-68)||(39225012-39225061)
chr3 (35-80)||(39956677-39956722)
chr3 (33-78)||(40230436-40230481)
chr3 (33-77)||(4029645-4029689)
chr3 (33-80)||(9264501-9264548)
chr3 (33-80)||(21832200-21832247)
chr3 (33-80)||(22339797-22339844)
chr3 (33-80)||(22407442-22407489)
chr3 (33-80)||(22407649-22407696)
chr3 (33-80)||(29369847-29369894)
chr3 (33-80)||(31564004-31564051)
chr3 (33-80)||(44573695-44573742)
chr3 (33-80)||(44573992-44574039)
chr3 (33-80)||(50203858-50203905)
chr3 (37-80)||(51338446-51338489)
chr3 (33-74)||(3985835-3985876)
chr3 (35-80)||(10453706-10453751)
chr3 (280-325)||(35699978-35700023)
chr3 (33-70)||(41380789-41380826)
chr3 (33-74)||(51338404-51338445)
chr3 (153-216)||(4155402-4155466)
chr3 (33-77)||(4191123-4191167)
chr3 (37-77)||(50338387-50338427)
chr3 (33-80)||(9658301-9658348)
chr3 (34-77)||(11414422-11414465)
chr3 (33-80)||(13769292-13769339)
chr3 (33-80)||(21750531-21750578)
chr3 (33-80)||(25627921-25627968)
chr3 (33-80)||(26366787-26366834)
chr3 (37-80)||(31563704-31563747)
chr3 (33-80)||(34715456-34715503)
chr3 (33-80)||(35011920-35011967)
chr3 (33-80)||(43101372-43101419)
chr3 (33-80)||(44573382-44573429)
chr3 (33-80)||(53640173-53640220)
chr3 (33-80)||(54369095-54369142)
chr3 (37-80)||(54591470-54591513)
chr3 (38-80)||(14170005-14170047)
chr3 (34-80)||(38300754-38300800)
chr3 (33-79)||(45828041-45828087)
chr3 (201-238)||(1348867-1348904)
chr3 (33-74)||(9179195-9179236)
chr3 (276-329)||(11659746-11659799)
chr3 (33-74)||(24539216-24539257)
chr3 (32-73)||(34250352-34250393)
chr3 (33-74)||(34356843-34356884)
chr3 (33-74)||(35011719-35011760)
chr3 (35-80)||(37223631-37223676)
chr3 (47-80)||(37223801-37223834)
chr3 (32-73)||(40337876-40337917)
chr3 (35-80)||(42258966-42259011)
chr3 (19-72)||(43955326-43955379)
chr3 (33-74)||(48407547-48407588)
chr3 (47-80)||(53639980-53640013)
chr3 (32-76)||(1353473-1353517)
chr3 (36-80)||(11244545-11244589)
chr3 (33-81)||(12799925-12799973)
chr3 (32-80)||(24866218-24866266)
chr3 (19-79)||(30326928-30326988)
chr3 (36-79)||(36108606-36108650)
chr3 (36-80)||(38300287-38300331)
chr3 (33-77)||(39956468-39956512)
chr3 (203-239)||(47184537-47184573)
chr3 (32-72)||(49812221-49812261)
chr3 (33-73)||(50057092-50057132)
[»] scaffold0060 (2 HSPs)
scaffold0060 (37-80)||(13637-13680)
scaffold0060 (33-79)||(20597-20643)
[»] chr6 (37 HSPs)
chr6 (33-80)||(15101112-15101159)
chr6 (33-80)||(16876831-16876878)
chr6 (33-80)||(16877011-16877058)
chr6 (33-80)||(28149849-28149896)
chr6 (34-80)||(17147907-17147953)
chr6 (281-330)||(466318-466367)
chr6 (37-81)||(5269278-5269322)
chr6 (33-80)||(1744843-1744890)
chr6 (33-80)||(8144073-8144120)
chr6 (33-80)||(10418339-10418386)
chr6 (33-80)||(11313383-11313430)
chr6 (33-80)||(19712610-19712657)
chr6 (33-80)||(24055110-24055157)
chr6 (33-80)||(24558639-24558686)
chr6 (33-74)||(10733439-10733480)
chr6 (33-74)||(12134484-12134525)
chr6 (38-74)||(4356024-4356060)
chr6 (33-77)||(24558847-24558891)
chr6 (32-79)||(13353223-13353270)
chr6 (37-80)||(16590240-16590283)
chr6 (37-80)||(16605097-16605140)
chr6 (37-80)||(19054549-19054592)
chr6 (33-80)||(19712405-19712452)
chr6 (33-80)||(27914327-27914374)
chr6 (32-79)||(33796348-33796395)
chr6 (50-80)||(3713254-3713284)
chr6 (34-80)||(8427606-8427652)
chr6 (19-73)||(9592385-9592439)
chr6 (33-79)||(11316900-11316946)
chr6 (37-79)||(13316973-13317015)
chr6 (205-266)||(24745752-24745811)
chr6 (33-74)||(1469023-1469064)
chr6 (32-77)||(8566974-8567019)
chr6 (185-238)||(19385597-19385649)
chr6 (198-238)||(2115324-2115364)
chr6 (32-72)||(9601842-9601882)
chr6 (34-78)||(25184268-25184312)
[»] chr1 (73 HSPs)
chr1 (33-80)||(21538935-21538982)
chr1 (33-80)||(29273067-29273114)
chr1 (33-80)||(29273226-29273273)
chr1 (34-80)||(29272909-29272955)
chr1 (19-80)||(17557710-17557771)
chr1 (32-80)||(2104260-2104308)
chr1 (33-81)||(9381154-9381202)
chr1 (14-74)||(13031123-13031183)
chr1 (32-80)||(26366832-26366880)
chr1 (17-72)||(347107-347162)
chr1 (33-80)||(15392081-15392128)
chr1 (33-80)||(15392160-15392207)
chr1 (33-80)||(20735578-20735625)
chr1 (33-80)||(39649085-39649132)
chr1 (37-80)||(43361557-43361600)
chr1 (33-80)||(52846850-52846897)
chr1 (35-73)||(19609188-19609226)
chr1 (33-83)||(25799237-25799287)
chr1 (32-74)||(36332174-36332216)
chr1 (34-80)||(38474339-38474385)
chr1 (33-74)||(463084-463125)
chr1 (33-74)||(11149424-11149465)
chr1 (35-80)||(19937046-19937091)
chr1 (35-80)||(31305767-31305812)
chr1 (32-77)||(40571586-40571631)
chr1 (37-78)||(43361762-43361803)
chr1 (33-78)||(48558322-48558367)
chr1 (35-79)||(102084-102128)
chr1 (36-79)||(10861743-10861787)
chr1 (32-72)||(11924950-11924990)
chr1 (163-325)||(39007307-39007468)
chr1 (19-79)||(39348354-39348414)
chr1 (33-80)||(4022126-4022173)
chr1 (33-80)||(15391875-15391922)
chr1 (37-80)||(17419843-17419886)
chr1 (32-71)||(19809958-19809997)
chr1 (16-79)||(21765145-21765208)
chr1 (33-80)||(22892434-22892481)
chr1 (33-80)||(35024461-35024508)
chr1 (33-80)||(35926249-35926296)
chr1 (186-322)||(38076320-38076454)
chr1 (33-80)||(43423335-43423382)
chr1 (33-80)||(46098533-46098580)
chr1 (192-238)||(2516924-2516970)
chr1 (35-73)||(7525050-7525088)
chr1 (32-74)||(10239493-10239535)
chr1 (193-238)||(19609456-19609502)
chr1 (38-80)||(20735811-20735853)
chr1 (200-238)||(20738713-20738751)
chr1 (13-59)||(21641401-21641447)
chr1 (34-79)||(25799177-25799223)
chr1 (34-80)||(38870951-38870997)
chr1 (192-238)||(41590508-41590553)
chr1 (29-79)||(41590536-41590586)
chr1 (34-80)||(45403496-45403542)
chr1 (34-80)||(51722310-51722356)
chr1 (280-325)||(3951921-3951966)
chr1 (185-238)||(32344731-32344784)
chr1 (33-74)||(33879779-33879820)
chr1 (33-74)||(33964435-33964476)
chr1 (19-72)||(38076376-38076429)
chr1 (38-79)||(45264719-45264760)
chr1 (37-77)||(5222753-5222793)
chr1 (208-266)||(7525052-7525107)
chr1 (33-77)||(9380959-9381003)
chr1 (185-225)||(11584371-11584411)
chr1 (32-80)||(13279561-13279609)
chr1 (33-69)||(19481393-19481429)
chr1 (37-77)||(21428063-21428103)
chr1 (13-64)||(29409945-29409997)
chr1 (32-72)||(31789413-31789453)
chr1 (37-73)||(33342283-33342319)
chr1 (153-216)||(38733229-38733293)
[»] scaffold1138 (1 HSPs)
scaffold1138 (33-80)||(2080-2127)
[»] scaffold0434 (2 HSPs)
scaffold0434 (33-80)||(13362-13409)
scaffold0434 (33-80)||(13569-13616)
[»] scaffold0050 (1 HSPs)
scaffold0050 (34-77)||(51631-51674)
[»] scaffold0029 (1 HSPs)
scaffold0029 (33-80)||(76908-76955)
[»] scaffold0729 (2 HSPs)
scaffold0729 (34-75)||(2752-2793)
scaffold0729 (37-77)||(2535-2575)
[»] scaffold0010 (1 HSPs)
scaffold0010 (19-71)||(161110-161162)
[»] scaffold0989 (1 HSPs)
scaffold0989 (33-80)||(2948-2995)
[»] scaffold0519 (2 HSPs)
scaffold0519 (32-79)||(1938-1985)
scaffold0519 (32-79)||(2173-2220)
[»] scaffold0419 (1 HSPs)
scaffold0419 (37-76)||(4244-4283)
[»] scaffold0459 (1 HSPs)
scaffold0459 (36-78)||(13356-13398)
[»] scaffold0366 (2 HSPs)
scaffold0366 (36-78)||(10997-11039)
scaffold0366 (36-78)||(14663-14705)
[»] scaffold0054 (1 HSPs)
scaffold0054 (34-80)||(21265-21311)
[»] scaffold0072 (1 HSPs)
scaffold0072 (280-325)||(24530-24575)


Alignment Details
Target: chr2 (Bit Score: 301; Significance: 1e-169; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 33456096 - 33455748
Alignment:
Q  1 acagttcctcagtaactattagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcctttcagttattaaaccatgta 100  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33456096 acagttcctcagtaactattagaatttgggttgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcctttcagttattaacccatgta 33455997  T
Q  101 caggcaatatcacgcccatgactgcacacctcgagtgtgaccctagtggcttgatagcgaaaacctgatggcaggtagcccaacgatcttcgatagactc 200  Q
    |||||||||||| |||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33455996 caggcaatatcatgcccatgactgcacacctcgaacgtgaccctagtggcctgatagcgaaaacctgatggcaggtagcccaatgatcttcgatagactc 33455897  T
Q  201 tgataccatcttagaatttgggttgagtctaactcaacaaccttacaaaacctgcatgtaaggtgaagactatatctatttataaacacattgtcaagcc 300  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33455896 tgataccatcttagaatttgggttgagtctaactcaacatccttacaaaacctgcatgtaaggtgaaaactatatctatttataaacacattgtcaagcc 33455797  T
Q  301 atatctcattcaatgtgagactctttaacagtaaccaagcacaagtgtg 349  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||    
T  33455796 atatctcattcaatatgagactctttaacagtaaccaagaacaagtgtg 33455748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 884160 - 884113
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  884160 gggcctaactcaaccttacaaaaccggcttgtaaggtgaggattgcct 884113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 3435487 - 3435534
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  3435487 gggcctaactcatccttacaaaaccggtttgtaaggtgaggattgcct 3435534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 3008478 - 3008422
Alignment:
Q  17 tattagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    |||||||||| ||| ||||||||||||||||||||||||| || |||||||||||||    
T  3008478 tattagaatttgggttgggcctaactcaaccttacaaaactggcttgtaaggtgagg 3008422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 17727507 - 17727459
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcctt 81  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||    
T  17727507 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcctt 17727459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 27545116 - 27545164
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||    
T  27545116 tgggtctaactcatccttacaaaaccggtttgtaaggtgaggattgcct 27545164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 883953 - 883906
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  883953 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 883906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 20998990 - 20999037
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  20998990 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 20999037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 33985772 - 33985819
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  33985772 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 33985819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 34775460 - 34775413
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  34775460 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 34775413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 11969156 - 11969108
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||| |||||||||||||| |||||||||||||| |||||    
T  11969156 tgggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 11969108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 883602 - 883649
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  883602 gggcataactcatccttacaaaaccggcttgtaaggtgaggattgcct 883649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 3976472 - 3976519
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  3976472 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 3976519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 238
Target Start/End: Complemental strand, 7252300 - 7252261
Alignment:
Q  199 tctgataccatcttagaatttgggttgagtctaactcaac 238  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  7252300 tctgataccatcttagaatttgggttgagcctaactcaac 7252261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 21214202 - 21214249
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  21214202 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 21214249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 32667286 - 32667239
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  32667286 gggcctaactcatccttacaaaaccggcttgtaaggtaaggattgcct 32667239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 40010077 - 40010030
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||| || |||||||||||||| ||||||||||||||||||||    
T  40010077 gggcctaacacatccttacaaaaccggcttgtaaggtgaggattgcct 40010030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 42768335 - 42768382
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  42768335 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 42768382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 43195887 - 43195840
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  43195887 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 43195840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 93139 - 93185
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||||| |||||||||||||| |||||||||||||| ||||    
T  93139 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcc 93185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 3185992 - 3185946
Alignment:
Q  192 gatagactctgataccatcttagaatttgggttgagtctaactcaac 238  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  3185992 gataggctctgataccatcttaaaatttgggtcgagtctaactcaac 3185946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 324
Target Start/End: Original strand, 11064469 - 11064604
Alignment:
Q  187 tcttcgatagactctgataccatcttagaatttgggttgagtctaactcaacaaccttacaaaacctgcatgtaaggtgaagactatatctatttataaa 286  Q
    |||| ||||| ||| |||||||| |||||||||||||||   ||||||||||  ||||  |||||  || ||||||||||||||||   | | ||||| |    
T  11064469 tcttggataggctccgataccatattagaatttgggttgcacctaactcaac--ccttggaaaactggcttgtaaggtgaagactactcccacttataga 11064566  T
Q  287 cacattgtcaagccatatctcattcaatgtgagactct 324  Q
    |||||  ||| |||||||||||| ||||||| ||||||    
T  11064567 cacatcttcatgccatatctcatccaatgtgggactct 11064604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 902026 - 901985
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  902026 gggcctaactcatccttacaaaaccggcttgtaaggtgagga 901985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 14408092 - 14408047
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgc 78  Q
    ||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  14408092 gggcctaactcaaccttacaaaaccggcttgtaaggtaagggttgc 14408047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 22127064 - 22127003
Alignment:
Q  19 ttagaattcggggtgggcctaactcaacc-ttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    ||||||||  || |||||||||||||||| |||||||| |||||||||||||||||| ||||    
T  22127064 ttagaattttggttgggcctaactcaacccttacaaaatcggtttgtaaggtgaggactgcc 22127003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 25286261 - 25286302
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  25286261 gggcctaactcatccttacaaaaccggcttgtaaggtgagga 25286302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 12432001 - 12431957
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    ||||||| |||| |||||||||||||| |||||||||||||||||    
T  12432001 gggcctagctcatccttacaaaaccggcttgtaaggtgaggattg 12431957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 25621286 - 25621326
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  25621286 gggcctaactcatccttacaaaaccggcttgtaaggtgagg 25621326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 39108454 - 39108414
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||||| ||||||||||||||||| ||||||||||||||    
T  39108454 ctaactcatccttacaaaaccggtttataaggtgaggattg 39108414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 6114508 - 6114461
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    ||||||||||||  |||||||||||||| |||||| ||||||||||||    
T  6114508 tgggcctaactcgtccttacaaaaccggcttgtaaagtgaggattgcc 6114461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 16007076 - 16007037
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggatt 76  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  16007076 ctaactcatccttacaaaaccggcttgtaaggtgaggatt 16007037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 16419416 - 16419345
Alignment:
Q  146 gtggcttgatagcgaaaacctgatggcaggtagcccaacg-atcttcgatagactctgataccatcttagaa 216  Q
    |||||| ||||||| ||||||||| |||||| |||||| | ||||| || || |||||||||||||||||||    
T  16419416 gtggctcgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaa 16419345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 19860140 - 19860093
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||| ||| |||||||||||||| |||||||||| |||||||||    
T  19860140 gggcctaaatcatccttacaaaaccggcttgtaaggtgtggattgcct 19860093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 23054429 - 23054382
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||  |||||||||||||| |||||    
T  23054429 gggcctaactcatccttacaaaaccgtcttgtaaggtgaggagtgcct 23054382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 25441796 - 25441753
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||    
T  25441796 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcc 25441753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 29684110 - 29684067
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||| | |||||||||||||| ||||||||||||||||||||    
T  29684110 ctaacttatccttacaaaaccggcttgtaaggtgaggattgcct 29684067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 30156311 - 30156264
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||| | |||||||||||||| |||||||||||||| |||||    
T  30156311 gggcctaacttatccttacaaaaccggcttgtaaggtgaggagtgcct 30156264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 30160430 - 30160383
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||| |||| |||||    
T  30160430 gggcctaactcatccttacaaaaccggcttgtaaggtaaggagtgcct 30160383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 31761235 - 31761188
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||||||||||||   ||||||||||||||||||||    
T  31761235 gggcctaactcatccttacaaaaccaacttgtaaggtgaggattgcct 31761188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 31761434 - 31761387
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||| ||||||| |||||||||| ||| ||||||||||||||||||||    
T  31761434 gggcttaactcatccttacaaaatcggcttgtaaggtgaggattgcct 31761387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 33985976 - 33986023
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||| |||||  |||||||||||||| ||||||||||||||||||||    
T  33985976 gggcccaactcttccttacaaaaccggcttgtaaggtgaggattgcct 33986023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 40005410 - 40005473
Alignment:
Q  17 tattagaattcggggt-gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||| ||||| ||| |||||||||||||||||| |||| || ||||||||||| ||||    
T  40005410 tattagaatttggggttgggactaactcaaccttacaaagccggcttttaaggtgaggaatgcc 40005473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 14466425 - 14466471
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgc 78  Q
    |||||||||| |||||  |||||||||| ||||||||||||||||||    
T  14466425 tgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgc 14466471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 28895630 - 28895588
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||| |||||||| |||||||||||||| ||||||||||||||    
T  28895630 tgggtctaactcatccttacaaaaccggcttgtaaggtgagga 28895588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 39386772 - 39386726
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||| |||||||||||| |||  |||||||||||||||||    
T  39386772 ggcctaactcatccttacaaaaccagttcataaggtgaggattgcct 39386726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 44403945 - 44403987
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgaggattgc 78  Q
    ||||||||| |||||||||||| |||||| |||||||||||||    
T  44403945 cctaactcatccttacaaaaccagtttgtgaggtgaggattgc 44403987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 93737 - 93782
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    ||||||||||| ||| |||||||||| |||| ||||||||||||||    
T  93737 ggcctaactcatcctcacaaaaccggcttgtgaggtgaggattgcc 93782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 2333359 - 2333400
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||| ||||||||||||||||||| || ||||||||||||||    
T  2333359 gggcttaactcaaccttacaaaactggcttgtaaggtgagga 2333400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 238
Target Start/End: Complemental strand, 3186376 - 3186347
Alignment:
Q  209 tcttagaatttgggttgagtctaactcaac 238  Q
    ||||||||||||||||||||||||||||||    
T  3186376 tcttagaatttgggttgagtctaactcaac 3186347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 4493198 - 4493128
Alignment:
Q  194 tagactctgataccatcttagaatttgggttgagtctaactcaacaaccttacaaaacctgcatgtaaggtga 266  Q
    |||||||||||  ||||||||||||||| ||||  ||||||||  | |||||||||||| || ||||||||||    
T  4493198 tagactctgatttcatcttagaatttggtttgaacctaactca--atccttacaaaaccggcttgtaaggtga 4493128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 5424787 - 5424824
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  5424787 ctaactcatccttacaaaaccggcttgtaaggtgagga 5424824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 9889319 - 9889360
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    ||||||||||||| |||||||||||||| ||||| |||||||    
T  9889319 tgggcctaactcatccttacaaaaccggcttgtatggtgagg 9889360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 21213892 - 21213933
Alignment:
Q  39 aactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||| |||||||||||||| |||||||||||||| |||||    
T  21213892 aactcatccttacaaaaccggcttgtaaggtgaggagtgcct 21213933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 26237181 - 26237128
Alignment:
Q  185 gatcttcgatagactctgataccatcttagaatttgggttgagtctaactcaac 238  Q
    |||||| |||||||||||||||||||||| | ||| |||  |||||||||||||    
T  26237181 gatcttggatagactctgataccatcttaaacttttggtcaagtctaactcaac 26237128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 39108316 - 39108279
Alignment:
Q  40 actcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  39108316 actcatccttacaaaaccggcttgtaaggtgaggattg 39108279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 12432205 - 12432161
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||| ||||| ||||||  |||||||||||||||||||||    
T  12432205 cctaactcatccttaaaaaaccaatttgtaaggtgaggattgcct 12432161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 12931556 - 12931512
Alignment:
Q  281 tataaacacattgtcaagccatatctcattcaatgtgagactctt 325  Q
    |||||||||||||||   ||||||||||| |||||||||||||||    
T  12931556 tataaacacattgtctgaccatatctcatccaatgtgagactctt 12931512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 15124725 - 15124789
Alignment:
Q  153 gatagcgaaaacctgatggcaggtagcccaacg-atcttcgatagactctgataccatcttagaa 216  Q
    |||| |||||||||||| |||||| | |||| | ||||| || ||||||||||||||||||||||    
T  15124725 gataacgaaaacctgatagcaggtggtccaatggatcttggagagactctgataccatcttagaa 15124789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 16533454 - 16533390
Alignment:
Q  153 gatagcgaaaacctgatggcaggtagcccaa-cgatcttcgatagactctgataccatcttagaa 216  Q
    ||||||||||||||||| |||||||||||||  ||||||  | || |||||||||||| ||||||    
T  16533454 gatagcgaaaacctgatagcaggtagcccaatggatcttgaagaggctctgataccattttagaa 16533390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 29676393 - 29676353
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||| ||||||||||||||||||  ||||||||||||||    
T  29676393 ctaacttaaccttacaaaaccggttcttaaggtgaggattg 29676353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 33532740 - 33532784
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||||||||||| ||||| |||||||| |||||    
T  33532740 cctaactcaaccctacaaaaccggcttgtacggtgaggagtgcct 33532784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 21633518 - 21633565
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21633518 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 21633565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 21641765 - 21641812
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21641765 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 21641812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 30330749 - 30330705
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  30330749 cctaactcatccttacaaaaccggtttgtaaggtgaggattgcct 30330705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 48105 - 48152
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  48105 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 48152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 48312 - 48359
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  48312 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 48359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 2908770 - 2908817
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  2908770 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 2908817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 13413687 - 13413640
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  13413687 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 13413640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 35526989 - 35527036
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  35526989 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 35527036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 35527275 - 35527322
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  35527275 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 35527322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 37656733 - 37656780
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  37656733 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 37656780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 34457199 - 34457154
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgc 78  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||    
T  34457199 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgc 34457154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 28358036 - 28358080
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  28358036 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattg 28358080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 38376834 - 38376790
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  38376834 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattg 38376790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 2908567 - 2908610
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||| |||||||||||||| ||||||||||||||||||||    
T  2908567 ctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 2908610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 3015622 - 3015669
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  3015622 gggcctaactcaaccttacaaaaccggcttgcaaggtgagggttgcct 3015669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 3763009 - 3762962
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||| ||||||||    
T  3763009 gggcctaactcatccttacaaaaccggcttgtaaggtgaagattgcct 3762962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 28156133 - 28156086
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  28156133 gggcctaattcatccttacaaaaccggcttgtaaggtgaggattgcct 28156086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 30366729 - 30366674
Alignment:
Q  19 ttagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||| ||  ||||||||||||||||||||||| |||| ||||||||||||||    
T  30366729 ttagaatttggtttgggcctaactcaaccttacaaagccggcttgtaaggtgagga 30366674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 37781845 - 37781892
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||||    
T  37781845 gggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcct 37781892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 37995635 - 37995682
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  37995635 gggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgcct 37995682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 40169042 - 40169089
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||| |||||||    
T  40169042 gggcctaactcatccttacaaaaccggcttgtaaggtgagaattgcct 40169089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 1892090 - 1892132
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  1892090 tgggcctaactcatccttacaaaaccggcttgtaaggtgagga 1892132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 27760173 - 27760131
Alignment:
Q  38 taactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||||||||||||| |||||||||||||| |||||    
T  27760173 taactcaaccttacaaaaccggcttgtaaggtgaggagtgcct 27760131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 30770065 - 30770111
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||||| ||||||||||||||||| | ||||||||||||||    
T  30770065 gggcctaactcatccttacaaaaccggtttatgaggtgaggattgcc 30770111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 31973137 - 31973191
Alignment:
Q  19 ttagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    |||||||| ||| ||||||||||| ||||||||||||||||  ||||||||||||    
T  31973137 ttagaatttgggttgggcctaactgaaccttacaaaaccggcatgtaaggtgagg 31973191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 12965247 - 12965288
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  12965247 gggcctaactcatccttacaaaaccggcttgtaaggtgagga 12965288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 13843800 - 13843759
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  13843800 gggcctaactcatccttacaaaaccggcttgtaaggtgagga 13843759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 34457406 - 34457361
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgc 78  Q
    |||||||||||| |||||||||||||| |||||||||||| |||||    
T  34457406 gggcctaactcatccttacaaaaccggcttgtaaggtgagaattgc 34457361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 38131867 - 38131826
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  38131867 gggcctaactcatccttacaaaaccggcttgtaaggtgagga 38131826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 15287157 - 15287109
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||| |||||||| | |||||||||||| ||||||||||||||||||||    
T  15287157 tgggtctaactcatcattacaaaaccggcttgtaaggtgaggattgcct 15287109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 31973407 - 31973439
Alignment:
Q  193 atagactctgataccatcttagaatttgggttg 225  Q
    |||||||||||||||||||||||||||||||||    
T  31973407 atagactctgataccatcttagaatttgggttg 31973439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 38658503 - 38658543
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgag 72  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  38658503 tgggactaactcatccttacaaaaccggtttgtaaggtgag 38658543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 39205664 - 39205712
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||| |||||||||||||| || ||||||||||| |||||    
T  39205664 tgggcctaactcatccttacaaaaccggcttttaaggtgaggagtgcct 39205712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 43490217 - 43490261
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||||||||| ||| |||||||||| |||||||||||||||||    
T  43490217 gggcctaactcatcctcacaaaaccggcttgtaaggtgaggattg 43490261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 873697 - 873744
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||| | |||||||||||||| |||||    
T  873697 gggcctaactcatccttacaaaacctgcttgtaaggtgaggaatgcct 873744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 1028094 - 1028141
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| | | ||||||||||||||||||||||||| |||||    
T  1028094 gggcctaactcatcgtcacaaaaccggtttgtaaggtgaggagtgcct 1028141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 2716649 - 2716602
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| || ||||||||||| |||||    
T  2716649 gggcctaactcatccttacaaaaccggcttataaggtgaggagtgcct 2716602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 3015418 - 3015465
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||||||||||||||||| ||| || |||||| ||||||    
T  3015418 gggcctaactcaaccttacaaaaccggcttgcaatgtgagggttgcct 3015465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 11632534 - 11632487
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||| |||||| |||||||||||||| || |||||||||||||||||    
T  11632534 gggcccaactcatccttacaaaaccggcttataaggtgaggattgcct 11632487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 13844116 - 13844077
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgag 72  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  13844116 gggcctaactcatccttacaaaaccgttttgtaaggtgag 13844077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 24125161 - 24125122
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggatt 76  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  24125161 ctaactcatccttacaaaaccggcttgtaaggtgaggatt 24125122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 24918264 - 24918225
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgag 72  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  24918264 gggcctaactcatccttacaaaaccggcttgtaaggtgag 24918225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 24994172 - 24994133
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgag 72  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  24994172 gggcctaactcatccttacaaaaccggcttgtaaggtgag 24994133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 38663350 - 38663303
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||| || |||||    
T  38663350 gggcctaactcatccttacaaaaccggcttgtaaggtgacgagtgcct 38663303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 40168860 - 40168907
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||| | ||||||| ||||||||||||    
T  40168860 gggcctaactcatccttacaaaaccagcttgtaagatgaggattgcct 40168907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 79
Target Start/End: Original strand, 5090900 - 5090942
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||    
T  5090900 ctaactcaaccctacaaaaccggattgtaaggtgaagattgcc 5090942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 14314792 - 14314742
Alignment:
Q  113 cgcccatgactgcacacctcgagtgtgaccctagtggcttgatagcgaaaa 163  Q
    |||||| ||||| ||| || |||||||||||||||||| ||||||||||||    
T  14314792 cgcccaagactggacatctggagtgtgaccctagtggcctgatagcgaaaa 14314742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 16275358 - 16275304
Alignment:
Q  19 ttagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    |||||||| ||| |||| |||||||||||||||||||||   |||||||||||||    
T  16275358 ttagaatttgggctgggtctaactcaaccttacaaaaccaccttgtaaggtgagg 16275304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 22198982 - 22199028
Alignment:
Q  13 taactattagaattcggggtgggcctaactcaaccttacaaaaccgg 59  Q
    ||||| ||| |||| ||| ||||||||||||||||||||||||||||    
T  22198982 taactcttaaaatttgggttgggcctaactcaaccttacaaaaccgg 22199028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 29432514 - 29432476
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgag 72  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  29432514 ggcctaactcatccttacaaaaccggcttgtaaggtgag 29432476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 30758315 - 30758361
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||||| |||||||||||||| || | ||||||||||||||    
T  30758315 gggcctaactcatccttacaaaaccggcttatgaggtgaggattgcc 30758361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 38815678 - 38815724
Alignment:
Q  192 gatagactctgataccatcttagaatttgggttgagtctaactcaac 238  Q
    ||||||||| |||| ||||||||| |||||||||||||||| |||||    
T  38815678 gatagactccgatatcatcttagagtttgggttgagtctaattcaac 38815724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 904753 - 904794
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    ||||||| ||||| |||||||||||||| |||||||||||||    
T  904753 tgggcctgactcatccttacaaaaccggcttgtaaggtgagg 904794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 4796462 - 4796421
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    ||||||||||||| |||||||||||| | |||||||||||||    
T  4796462 tgggcctaactcatccttacaaaacccgcttgtaaggtgagg 4796421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 14256916 - 14256961
Alignment:
Q  280 ttataaacacattgtcaagccatatctcattcaatgtgagactctt 325  Q
    ||||||||||||| ||| | ||||||||| ||||||||||||||||    
T  14256916 ttataaacacattttcaggtcatatctcaatcaatgtgagactctt 14256961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 30366659 - 30366614
Alignment:
Q  285 aacacattgtcaagccatatctcattcaatgtgagactctttaaca 330  Q
    ||||||| |||| | |||||||||| ||||||||||||||||||||    
T  30366659 aacacatagtcaggtcatatctcatccaatgtgagactctttaaca 30366614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 30592530 - 30592485
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgc 78  Q
    |||||||||||| ||| | |||||||| ||||||||||||||||||    
T  30592530 gggcctaactcatcctcaaaaaaccggcttgtaaggtgaggattgc 30592485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 32337756 - 32337699
Alignment:
Q  17 tattagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||| ||| |||||||||| ||| | ||||||||||| ||||| ||||||||    
T  32337756 tattagaatttgggttgggcctaacacaatcctacaaaaccggcttgtagggtgagga 32337699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 38603912 - 38603953
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    |||| ||||||||  |||||||||||||||||||||||||||    
T  38603912 tgggtctaactcatacttacaaaaccggtttgtaaggtgagg 38603953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 395036 - 395080
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||| |||||||||| ||| |||||||||||||| |||||    
T  395036 cctaactcatccttacaaaatcggcttgtaaggtgaggagtgcct 395080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 9368664 - 9368616
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||| |||||  |||||||||| |||| |||||||||||||||    
T  9368664 tgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcct 9368616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 18914369 - 18914413
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    ||||||||||||  ||||||||||| | |||||||||||||||||    
T  18914369 gggcctaactcattcttacaaaaccagcttgtaaggtgaggattg 18914413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 27379268 - 27379186
Alignment:
Q  241 ccttacaaaacctgcatgtaaggtgaagactat--atctatttataaacacattgtcaagccatatctcattcaatgtgagact 322  Q
    ||||| |||||| || |||||||||| ||||||  ||| |||||||||||||| |||  |||||||||||| ||||||| ||||    
T  27379268 ccttaaaaaaccagcttgtaaggtgaggactattcatc-atttataaacacatggtcgggccatatctcatccaatgtgggact 27379186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 27560666 - 27560714
Alignment:
Q  186 atcttcgatagactctgataccatcttagaatttgggttgagtctaact 234  Q
    ||||| ||||| ||||||||||||||||||||| |||| ||| ||||||    
T  27560666 atcttggataggctctgataccatcttagaattcgggtcgagcctaact 27560714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 30870891 - 30870931
Alignment:
Q  38 taactcaaccttacaaaaccggtttgtaaggtgaggattgc 78  Q
    ||||||||||||| |||||||| || |||||||||||||||    
T  30870891 taactcaaccttataaaaccggcttataaggtgaggattgc 30870931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 38069571 - 38069631
Alignment:
Q  17 tattagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||||||| ||| ||||||||||||||||||| ||||| || |||  ||| ||||||||    
T  38069571 tattagaatttgggttgggcctaactcaaccttataaaacaggcttgcgaggcgaggattg 38069631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 39848899 - 39848939
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgag 72  Q
    ||||||||| |||||| ||||||||| ||||||||||||||    
T  39848899 tgggcctaattcaaccctacaaaaccagtttgtaaggtgag 39848939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 43490464 - 43490508
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||||||||| |||||||||||||| ||| |||||||| ||||    
T  43490464 gggcctaactcatccttacaaaaccggcttggaaggtgagtattg 43490508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 25000554 - 25000501
Alignment:
Q  185 gatcttcgatagactctgataccatcttagaatttgggttgagtctaactcaac 238  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  25000554 gatcttcgatagactctgataccatcttagaattttggttgagtttaactcaac 25000501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 6783141 - 6783094
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  6783141 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 6783094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 23396712 - 23396665
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  23396712 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 23396665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 39164743 - 39164689
Alignment:
Q  20 tagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    ||||||| ||| ||||||||||||||||||| ||||| |||||||||||||||||    
T  39164743 tagaatttgggttgggcctaactcaaccttataaaactggtttgtaaggtgagga 39164689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 1596897 - 1596850
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  1596897 tgggcctaacacaaccctacaaaaccggcttgtaaggtgaggattgcc 1596850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 1663605 - 1663652
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  1663605 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 1663652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 31374864 - 31374821
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||| |||||||||||||| ||||||||||||||||||||    
T  31374864 ctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 31374821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 43384281 - 43384328
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  43384281 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 43384328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 80
Target Start/End: Complemental strand, 9379090 - 9379056
Alignment:
Q  46 ccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||||||||||||||||||||||||||    
T  9379090 ccttacaaaaccggtttgtaaggtgaggattgcct 9379056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 4454839 - 4454798
Alignment:
Q  38 taactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    ||||||| ||||||||||||||||||| ||||||||||||||    
T  4454839 taactcatccttacaaaaccggtttgtgaggtgaggattgcc 4454798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 36092393 - 36092434
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  36092393 gggcctaactcatccttacaaaaccggcttgtaaggtgagga 36092434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 41670936 - 41670895
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  41670936 gggcctaactcatccttacaaaaccggcttgtaaggtgagga 41670895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 257268 - 257315
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| | |||||||||||| |||||    
T  257268 gggcctaactcatccttacaaaaccggctagtaaggtgaggagtgcct 257315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 1661192 - 1661239
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||  ||||||||||||| |||||||||||||| |||||    
T  1661192 gggcctaactcattcttacaaaaccggcttgtaaggtgaggagtgcct 1661239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 7135244 - 7135291
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| | |||||||||||| |||||||||||||| |||||    
T  7135244 gggcctaactcatctttacaaaaccggcttgtaaggtgaggagtgcct 7135291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 7832964 - 7833011
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||||| ||||||||||  |||||||||||||||||    
T  7832964 gggcctaactcatccttaaaaaaccggttcataaggtgaggattgcct 7833011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 27821149 - 27821090
Alignment:
Q  23 aattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgccttt 82  Q
    |||| ||| ||| ||||||||||||||| |||||||||||||| |||||| | |||||||    
T  27821149 aatttgggttggacctaactcaaccttaaaaaaccggtttgtatggtgagcagtgccttt 27821090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 28910131 - 28910088
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||| |||||||||||||| |||||||||||||| |||||    
T  28910131 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 28910088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 29252679 - 29252632
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| | | |||||||||| ||||||||||||||||||||    
T  29252679 gggcctaactcatcatcacaaaaccggcttgtaaggtgaggattgcct 29252632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 29469674 - 29469627
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||| |||||  |||||||||| |||||||||||||||||||    
T  29469674 tgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcc 29469627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 32000919 - 32000880
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    ||||||||||| |||||||||||||| |||||||||||||    
T  32000919 ggcctaactcatccttacaaaaccggcttgtaaggtgagg 32000880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 37272050 - 37272093
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||| |||||||||||||| |||||||||||||| |||||    
T  37272050 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 37272093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 39808465 - 39808512
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||| |||||||||| || |||||||||||||||||    
T  39808465 gggcctaactcatcctcacaaaaccggcttttaaggtgaggattgcct 39808512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 39808598 - 39808645
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||| ||||||| || ||||||||||||||||||||    
T  39808598 gggcctaactcatcctcacaaaactggcttgtaaggtgaggattgcct 39808645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 40703412 - 40703459
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||| ||||||||| |||||    
T  40703412 gggcctaactcatccttacaaaaccggcttgtgaggtgaggagtgcct 40703459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 43288367 - 43288320
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||| |||||| |||||    
T  43288367 gggcctaactcacccttacaaaaccggattgtaagatgaggagtgcct 43288320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 43288635 - 43288588
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||| | |||||||||||||| |||||||||||||| |||||    
T  43288635 gggcctaactaatccttacaaaaccggcttgtaaggtgaggagtgcct 43288588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 48116299 - 48116338
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  48116299 gcctaactcatccttacaaaaccggcttgtaaggtgagga 48116338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 2232194 - 2232152
Alignment:
Q  38 taactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||||||||| ||| |||| |||||||||||||||    
T  2232194 taactcaaccttacaaaatcggcttgtgaggtgaggattgcct 2232152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 23821363 - 23821405
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||||||| |||||||||||||| ||||||||||| |||||    
T  23821363 gcctaactcatccttacaaaaccggcttgtaaggtgatgattg 23821405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 27820948 - 27820910
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgag 72  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  27820948 ggcctaactcaaccttacaaaactggcttgtaaggtgag 27820910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 35866640 - 35866686
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||||| |||||||||||||| ||||||| |||| ||||||    
T  35866640 gggcctaactcatccttacaaaaccggcttgtaagttgagtattgcc 35866686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 42440914 - 42440876
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  42440914 gcctaactcatccttacaaaaccggtttgcaaggtgagg 42440876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 6745608 - 6745665
Alignment:
Q  17 tattagaattcggggtgggcctaactcaaccttacaaaacc-ggtttgtaaggtgagg 73  Q
    |||||||||| ||| |||||| ||| ||||||||||||||| |||| |||||||||||    
T  6745608 tattagaatttgggttgggccaaacacaaccttacaaaacctggttggtaaggtgagg 6745665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 6782927 - 6782882
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||| |||||  |||||||||| ||||||||||||||||||||    
T  6782927 gcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcct 6782882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 13310426 - 13310467
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| ||||||||||||||||||| | |||||||    
T  13310426 gggcctaactcatccttacaaaaccggtttgtgaagtgagga 13310467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 14595885 - 14595922
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    |||||||||||||||||||||||| || ||||||||||    
T  14595885 cctaactcaaccttacaaaaccggcttttaaggtgagg 14595922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 14596193 - 14596233
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    |||||||||||||||||||| ||||||| |||||||||||||    
T  14596193 tgggcctaactcaaccttac-aaaccggcttgtaaggtgagg 14596233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 21048690 - 21048723
Alignment:
Q  205 accatcttagaatttgggttgagtctaactcaac 238  Q
    ||||||||||||||||||||||| ||||||||||    
T  21048690 accatcttagaatttgggttgagcctaactcaac 21048723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 30727375 - 30727416
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgc 78  Q
    |||||||||||| |||||||||| |||| |||||||||||||    
T  30727375 ctaactcaacctcacaaaaccggcttgtgaggtgaggattgc 30727416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 40137697 - 40137738
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| | ||||||||||||    
T  40137697 gggcctaactcatccttacaaaaccggctcgtaaggtgagga 40137738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 40703653 - 40703694
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| |||| |||||||||    
T  40703653 gggcctaactcatccttacaaaaccggcttgtgaggtgagga 40703694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 41489995 - 41489954
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    |||||||| |||| |||||||||||||| |||||||||||||    
T  41489995 tgggcctagctcatccttacaaaaccggcttgtaaggtgagg 41489954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 23839092 - 23839136
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggatt 76  Q
    |||||||||| |||||| |||||||||| |||| |||||||||||    
T  23839092 tgggcctaacacaacctcacaaaaccggcttgtgaggtgaggatt 23839136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 27585356 - 27585312
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||| |||||||||||||| ||||| |||||||| |||||    
T  27585356 cctaactcatccttacaaaaccggcttgtacggtgaggagtgcct 27585312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 33834333 - 33834269
Alignment:
Q  153 gatagcgaaaacctgatggcaggtagcccaacg-atcttcgatagactctgataccatcttagaa 216  Q
    ||||| ||||||||||| |||||| |||||| | ||||| || || |||||||||||||||||||    
T  33834333 gatagggaaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaa 33834269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 38963561 - 38963593
Alignment:
Q  193 atagactctgataccatcttagaatttgggttg 225  Q
    ||||||||||||||||||||||||||| |||||    
T  38963561 atagactctgataccatcttagaattttggttg 38963593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 44760507 - 44760555
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||| ||||||||||| || ||| |||||||||| |||||    
T  44760507 tgggcctaactcatccttacaaaactggcttgaaaggtgaggagtgcct 44760555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 44874361 - 44874405
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggatt 76  Q
    |||||||||| ||||| ||||||| |||||||| |||||||||||    
T  44874361 tgggcctaacacaaccatacaaaatcggtttgtgaggtgaggatt 44874405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 49190101 - 49190206
Alignment:
Q  133 gagtgtgaccctagtggcttgatagcgaaaacctgatggcaggtagcccaacg-atcttcgatagactctgataccatcttagaatttgggttgagtcta 231  Q
    ||||||||||| ||||| | ||||||| |||||| |  |||||| | |||||| ||||| ||||| |||||||||||||||||||||||||||||| | |    
T  49190101 gagtgtgacccaagtggttcgatagcggaaacctaaaagcaggtggtccaacggatcttggataggctctgataccatcttagaatttgggttgagccaa 49190200  T
Q  232 actcaa 237  Q
    ||||||    
T  49190201 actcaa 49190206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 35399258 - 35399305
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35399258 gggcctaactcaaccttacaaaaccggcttgtaaggtgaggattgcct 35399305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 35399417 - 35399464
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35399417 gggcctaactcaaccttacaaaaccggcttgtaaggtgaggattgcct 35399464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 28246096 - 28246048
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcctt 81  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  28246096 gggcctaactcatccttacaaaaccggtttgcaaggtgaggattgcctt 28246048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 12016684 - 12016731
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  12016684 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 12016731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 12016892 - 12016939
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  12016892 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 12016939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 28395280 - 28395233
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  28395280 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 28395233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 43943776 - 43943729
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  43943776 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 43943729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 5488469 - 5488423
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  5488469 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 5488423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 31254423 - 31254469
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||    
T  31254423 gggcctaactcatcctcacaaaaccggtttgtaaggtgaggattgcc 31254469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 22823901 - 22823946
Alignment:
Q  28 ggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||    
T  22823901 ggggtgggcctaactcaaccgtacaaaaccggcttgtaaggtgagg 22823946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 21498634 - 21498586
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcctt 81  Q
    |||||||||||| |||||||||||||| |||||||||||||||| ||||    
T  21498634 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattacctt 21498586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 25753609 - 25753653
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||    
T  25753609 cctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 25753653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 17077145 - 17077192
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  17077145 gggcctaactcaaccttacaaaaccggcttgcaaggtgagggttgcct 17077192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 21497684 - 21497731
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  21497684 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 21497731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 21498290 - 21498243
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  21498290 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 21498243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 23018573 - 23018526
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  23018573 gggcctaactcatccttacaaaaccggcttgtaaggtgaggaatgcct 23018526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 28245891 - 28245844
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  28245891 gggcctaactcatccttacaaaaccggcttgcaaggtgaggattgcct 28245844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 29113552 - 29113505
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||||    
T  29113552 gggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcct 29113505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 29669364 - 29669411
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  29669364 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 29669411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 43972458 - 43972411
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  43972458 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 43972411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 45427253 - 45427300
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  45427253 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 45427300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 50830700 - 50830743
Alignment:
Q  15 actattagaattcggggtgggcctaactcaaccttacaaaaccg 58  Q
    |||||||||||| ||| |||||||||||||||||||||||||||    
T  50830700 actattagaatttgggttgggcctaactcaaccttacaaaaccg 50830743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 52214718 - 52214671
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  52214718 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 52214671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 53740285 - 53740238
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  53740285 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 53740238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 15665255 - 15665209
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||||    
T  15665255 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 15665209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 17905337 - 17905186
Alignment:
Q  114 gcccatgactgcacacctcgagtgtgaccctagtggcttgatagcgaaaacctgatggcaggtagcccaac-gatcttcgatagactctgataccatctt 212  Q
    ||||||||| | ||| || ||||||||||| |||||   ||||||| ||||||||| |||||| ||||||| ||| |  ||||| || | ||||||||||    
T  17905337 gcccatgacaggacatctggagtgtgacccgagtggtacgatagcggaaacctgatagcaggttgcccaacagatttaggataggctttaataccatctt 17905238  T
Q  213 agaatttgggttgagtctaactcaacaaccttacaaaacctgcatgtaaggtga 266  Q
    ||||||||| ||  | ||||||||  | |||||| ||||| || ||||||||||    
T  17905237 agaatttggcttaggcctaactca--agccttaccaaaccggcttgtaaggtga 17905186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 27634097 - 27634143
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||    
T  27634097 gggcctaactcatccttacaaaatcggtttgtgaggtgaggattgcc 27634143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 30490941 - 30490995
Alignment:
Q  19 ttagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    |||||||| ||| |||||||||||||||||||| ||| ||| |||||||||||||    
T  30490941 ttagaatttgggttgggcctaactcaaccttacgaaaacggcttgtaaggtgagg 30490995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 39110819 - 39110773
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  39110819 ggcctaactcaatcttacaaaatcggcttgtaaggtgaggattgcct 39110773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 6778504 - 6778463
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggat 75  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  6778504 ggcctaactcaaccttacaaaaccggcttgtgaggtgaggat 6778463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 24001605 - 24001552
Alignment:
Q  185 gatcttcgatagactctgataccatcttagaatttgggttgagtctaactcaac 238  Q
    |||||| ||||||||||||||| |||||||||||||||||| |  |||||||||    
T  24001605 gatcttggatagactctgatactatcttagaatttgggttgggcttaactcaac 24001552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 35565179 - 35565134
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||    
T  35565179 gcctaactcatccttacaaaaccggcttgtaaggggaggattgcct 35565134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 36558467 - 36558508
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  36558467 gggcctaactcatccttacaaaaccggcttgtaaggtgagga 36558508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 41176809 - 41176768
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  41176809 gggcctaactcatccttacaaaaccggcttgtaaggtgagga 41176768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 48046461 - 48046420
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    ||||||||||||||| |||||||||||| |||||||||||||    
T  48046461 tgggcctaactcaacgttacaaaaccggcttgtaaggtgagg 48046420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 50858115 - 50858074
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  50858115 gggcctaactcatccttacaaaaccggcttgtaaggtgagga 50858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 51470586 - 51470545
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  51470586 gggcctaactcatccttacaaaaccggcttgtaaggtgagga 51470545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 6778681 - 6778721
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  6778681 ctaactcaaccttacaaaaccggcttgtgaggtgaggattg 6778721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 27048412 - 27048456
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||    
T  27048412 cctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 27048456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 52827232 - 52827280
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||| ||||| |||||||||||||| |||||||||||||| |||||    
T  52827232 tgggcctgactcatccttacaaaaccggcttgtaaggtgaggagtgcct 52827280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 990650 - 990603
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||  |||||||||||||| |||||    
T  990650 gggcctaactcatccttacaaaaccgacttgtaaggtgaggagtgcct 990603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 991303 - 991260
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||| |||||||||||||| |||||||||||||| |||||    
T  991303 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 991260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 2220983 - 2221030
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    ||||||||||||  |||||||||||||| |||| ||||||||||||||    
T  2220983 tgggcctaactcgtccttacaaaaccggcttgtgaggtgaggattgcc 2221030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 13254486 - 13254439
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||  ||||||||||||| |||||||||||||| |||||    
T  13254486 gggcctaactcatgcttacaaaaccgggttgtaaggtgaggagtgcct 13254439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 16874178 - 16874217
Alignment:
Q  281 tataaacacattgtcaagccatatctcattcaatgtgaga 320  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  16874178 tataaacacattttcaagccatatctcatccaatgtgaga 16874217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 17076941 - 17076988
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||||||||||||||||| ||| || |||||| ||||||    
T  17076941 gggcctaactcaaccttacaaaaccggcttgcaaagtgagggttgcct 17076988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 18435927 - 18435974
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||| || |||||||||||||| |||||||||||||| |||||    
T  18435927 gggcctaacacatccttacaaaaccggcttgtaaggtgaggagtgcct 18435974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 27048138 - 27048185
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||| |||||||||| |||||    
T  27048138 gggcctaactcatccttacaaaaccggcttgcaaggtgaggagtgcct 27048185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 27634327 - 27634374
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||| ||| |||||||||||| |||||||    
T  27634327 gggcctaactcatccttacaaaatcggcttgtaaggtgagaattgcct 27634374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 29734664 - 29734617
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||| |||||| |||||||||||||| |||||||||||||| |||||    
T  29734664 gggcccaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 29734617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 34206256 - 34206303
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||| ||||||| |||||||||||||| |||||    
T  34206256 gggcctaactcatccttacgaaaccggcttgtaaggtgaggagtgcct 34206303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 45426937 - 45426984
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||  |||||||||||||| |||||    
T  45426937 gggcctaactcatccttacaaaaccgacttgtaaggtgaggagtgcct 45426984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 51469584 - 51469537
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||||||| |||||| |||||||||||||| |||||    
T  51469584 gggcctaactcatccttacacaaccggcttgtaaggtgaggagtgcct 51469537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 56511400 - 56511353
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||||||||||||||||  ||||||||||| |||||    
T  56511400 gggcctaactcatccttacaaaaccggttcataaggtgaggagtgcct 56511353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 17222668 - 17222714
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    ||||||||| || |||||||||||||| |||| ||||||||||||||    
T  17222668 gggcctaacacatccttacaaaaccggcttgtgaggtgaggattgcc 17222714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 27634532 - 27634578
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||||| | |||||||||||| |||| ||||||||||||||    
T  27634532 gggcctaactcatcgttacaaaaccggcttgtgaggtgaggattgcc 27634578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 28496508 - 28496546
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  28496508 gcctaactcatccttacaaaaccggcttgtaaggtgagg 28496546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 29669684 - 29669726
Alignment:
Q  38 taactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||| |||||||||||||| |||||||||||||| |||||    
T  29669684 taactcatccttacaaaaccggcttgtaaggtgaggagtgcct 29669726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 39111004 - 39110966
Alignment:
Q  39 aactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  39111004 aactcaaccttacaaaaccggcttgtaaggcgaggattg 39110966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 14945242 - 14945201
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgc 78  Q
    |||||||| ||||||||||||||||  |||||||||||||||    
T  14945242 ctaactcatccttacaaaaccggttcataaggtgaggattgc 14945201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 26942872 - 26942913
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    ||||||||||||| |||||||||| ||| |||||||||||||    
T  26942872 tgggcctaactcatccttacaaaatcggcttgtaaggtgagg 26942913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 226
Target Start/End: Complemental strand, 38257049 - 38257020
Alignment:
Q  197 actctgataccatcttagaatttgggttga 226  Q
    ||||||||||||||||||||||||||||||    
T  38257049 actctgataccatcttagaatttgggttga 38257020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 55253381 - 55253344
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  55253381 ctaactcaaccttacaaaaccgacttgtaaggtgagga 55253344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 34205997 - 34206041
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||| |||||||||||| | |||||||||||||| |||||    
T  34205997 cctaactcatccttacaaaaccagcttgtaaggtgaggagtgcct 34206041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 40717383 - 40717447
Alignment:
Q  153 gatagcgaaaacctgatggcaggtagcccaa-cgatcttcgatagactctgataccatcttagaa 216  Q
    ||||||| |||||||||||||||| ||||||  ||| || || || |||||||||||||||||||    
T  40717383 gatagcggaaacctgatggcaggtggcccaatggatattggagaggctctgataccatcttagaa 40717447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 46676731 - 46676675
Alignment:
Q  23 aattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||| ||| ||| |||||||||||| |||||||||   |||||||||||||||||||    
T  46676731 aatttgggttggacctaactcaaccctacaaaaccatcttgtaaggtgaggattgcc 46676675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 49824670 - 49824626
Alignment:
Q  21 agaattcggggtgggcctaactcaaccttacaaaaccggtttgta 65  Q
    |||||| ||| | |||||||||||||| |||||||||||||||||    
T  49824670 agaatttgggtttggcctaactcaaccctacaaaaccggtttgta 49824626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 20760661 - 20760708
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  20760661 gggcctaactcatccttacaaaaccggtttgtaaggtgaggattgcct 20760708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 30966065 - 30966129
Alignment:
Q  15 actattagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||||| ||| ||||||||||||||  |||||||||||| |||||||||||||| ||||    
T  30966065 actattagaatttgggttgggcctaactcaaatttacaaaaccggcttgtaaggtgaggactgcc 30966129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 8559684 - 8559637
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  8559684 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 8559637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 10989035 - 10989082
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  10989035 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 10989082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 10989242 - 10989289
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  10989242 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 10989289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 16454636 - 16454683
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  16454636 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 16454683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 43599414 - 43599367
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  43599414 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 43599367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 45031376 - 45031423
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||    
T  45031376 tgggcctaacacaaccttacaaaaccggcttgtaaggtgaggattgcc 45031423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 25972274 - 25972314
Alignment:
Q  185 gatcttcgatagactctgataccatcttagaatttgggttg 225  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  25972274 gatctttgatagactctgataccatcttagaatttgggttg 25972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 30590567 - 30590511
Alignment:
Q  17 tattagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    |||||||||| ||| | ||||||| |||||||||||||||||| |||||||||||||    
T  30590567 tattagaatttgggctaggcctaagtcaaccttacaaaaccggcttgtaaggtgagg 30590511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 45031167 - 45031211
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggatt 76  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  45031167 tgggcctaactcaaccttacaaaaccggcttgaaaggtgaggatt 45031211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 3183912 - 3183959
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| | |||||||||||| ||||||||||||||||||||    
T  3183912 gggcctaactcatcgttacaaaaccggcttgtaaggtgaggattgcct 3183959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 12605673 - 12605634
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  12605673 ggcctaactcatccttacaaaaccggtttgtaaggtgagg 12605634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 15010822 - 15010869
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  15010822 gggcctaactcatccttataaaaccggcttgtaaggtgaggattgcct 15010869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 15011030 - 15011077
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  15011030 gggcttaactcatccttacaaaaccggcttgtaaggtgaggattgcct 15011077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 18905959 - 18905912
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  18905959 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 18905912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 21653907 - 21653860
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  21653907 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 21653860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 32931504 - 32931457
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  32931504 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 32931457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 34248180 - 34248133
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  34248180 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 34248133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 34248462 - 34248415
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  34248462 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 34248415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 36997269 - 36997222
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  36997269 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 36997222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 40902394 - 40902441
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||| | |||||||||||||| ||||||||||||||||||||    
T  40902394 gggcctaacttatccttacaaaaccggcttgtaaggtgaggattgcct 40902441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 7730009 - 7729963
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||||| |||||||||||||| |||| ||||||||||||||    
T  7730009 gggcctaactcatccttacaaaaccggcttgtgaggtgaggattgcc 7729963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 36993949 - 36993995
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||||    
T  36993949 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 36993995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 330
Target Start/End: Complemental strand, 5940117 - 5940024
Alignment:
Q  237 acaaccttacaaaacctgcatgtaaggtgaagactatatctatttataaacacattgtcaagccatatctcattcaatgtgagactctttaaca 330  Q
    |||||| |||||||| ||| ||| |||||| || | |  | |||||||||||||||||||| |||| |||||| | ||||| ||||||||||||    
T  5940117 acaaccctacaaaacttgcttgtgaggtgaggattgtccccatttataaacacattgtcaaaccatctctcatccgatgtgggactctttaaca 5940024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 26642704 - 26642652
Alignment:
Q  19 ttagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtga 71  Q
    |||||||| ||| ||||||||| |||||||||| ||||||| |||||||||||    
T  26642704 ttagaatttgggttgggcctaaatcaaccttaccaaaccggcttgtaaggtga 26642652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 34622007 - 34621943
Alignment:
Q  16 ctattagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||| ||||| ||| ||||||||||||| |||||||| ||||| ||||||||||| || |||||    
T  34622007 ctattggaatttgggttgggcctaactcagccttacaacaccggcttgtaaggtgaagactgcct 34621943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 42584804 - 42584744
Alignment:
Q  161 aaacctgatggcaggtagcccaacg-atcttcgatagactctgataccatcttagaatttg 220  Q
    |||| |||| ||||||||||||||| ||||| ||||| |||||||||| ||||||||||||    
T  42584804 aaacatgatagcaggtagcccaacggatcttggataggctctgataccgtcttagaatttg 42584744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 80
Target Start/End: Original strand, 4195963 - 4195998
Alignment:
Q  45 accttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||||| ||||||||||||||||||||    
T  4195963 accttacaaaaccggcttgtaaggtgaggattgcct 4195998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 11232209 - 11232256
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||| |||||  |||||||||| |||||||||||||||||||    
T  11232209 tgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcc 11232256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 11232444 - 11232491
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||| |||||  |||||||||| |||||||||||||||||||    
T  11232444 tgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcc 11232491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 35908780 - 35908733
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcctt 81  Q
    ||||||||||| |||||||||||||| ||||| |||||||| ||||||    
T  35908780 ggcctaactcatccttacaaaaccggcttgtacggtgaggagtgcctt 35908733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 38475816 - 38475769
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||| ||||| ||||||||||| |||| ||||||||||||||    
T  38475816 tgggcctaacacaaccctacaaaaccggcttgtgaggtgaggattgcc 38475769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 42228870 - 42228827
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||    
T  42228870 ctaactcatccttacaaaatcggcttgtaaggtgaggattgcct 42228827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 43984317 - 43984364
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||| |||||||| |||||    
T  43984317 gggcctaactcatccttacaaaaccggcttgtatggtgaggagtgcct 43984364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 25972321 - 25972363
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||||||| ||||||||| | ||||||||||||||    
T  25972321 tgggcctaactcaaccctacaaaacctgcttgtaaggtgagga 25972363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 7338709 - 7338774
Alignment:
Q  15 actattagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggt-gaggattgcc 79  Q
    ||||||| |||| ||| | |||||||||||| |||||||||| || ||||||||| ||||||||||    
T  7338709 actattataattagggtttggcctaactcaatcttacaaaacaggcttgtaaggtggaggattgcc 7338774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 21653428 - 21653391
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtgag 72  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  21653428 gcctaactcatccttacaaaaccggcttgtaaggtgag 21653391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 33435982 - 33435942
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||||| | |||||||||||| |||||||||||||||||    
T  33435982 ctaactcatctttacaaaaccggcttgtaaggtgaggattg 33435942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 37312944 - 37312908
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtga 71  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  37312944 gcctaactccaccttacaaaatcggtttgtaaggtga 37312908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 37387085 - 37387121
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtga 71  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  37387085 gcctaactccaccttacaaaatcggtttgtaaggtga 37387121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 39588088 - 39588132
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||| |||||||||||||| || ||||||||||| |||||    
T  39588088 cctaactcatccttacaaaaccggcttataaggtgaggagtgcct 39588132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 37058771 - 37058815
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggatt 76  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  37058771 tgggcctaactcatccttacaaaaccggtttgtaaggtgaggatt 37058815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 9264087 - 9264134
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  9264087 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 9264134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 9264294 - 9264341
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  9264294 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 9264341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 19820530 - 19820573
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  19820530 ggcctaactcatccttacaaaaccggtttgtaaggtgaggattg 19820573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 39078772 - 39078819
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  39078772 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 39078819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 40230640 - 40230687
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  40230640 gggcttaactcaaccttacaaaaccggcttgtaaggtgaggattgcct 40230687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 49477430 - 49477383
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  49477430 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 49477383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 49477637 - 49477590
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  49477637 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 49477590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 50692426 - 50692379
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  50692426 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 50692379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 50692629 - 50692582
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  50692629 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 50692582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 51642429 - 51642476
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  51642429 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 51642476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 51642636 - 51642683
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  51642636 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 51642683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 39225012 - 39225061
Alignment:
Q  19 ttagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaagg 68  Q
    |||||||| ||| |||||||||||||||||||||| ||||||||||||||    
T  39225012 ttagaatttgggttgggcctaactcaaccttacaagaccggtttgtaagg 39225061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 39956677 - 39956722
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||    
T  39956677 gcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 39956722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 40230436 - 40230481
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgc 78  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||    
T  40230436 gggcctaactcaaccttacaaaaccggctcgtaaggtgaggattgc 40230481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 4029645 - 4029689
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||||||||| |||||||||||||||||||||||||| |||||    
T  4029645 gggcctaactcatccttacaaaaccggtttgtaaggtgaagattg 4029689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 9264501 - 9264548
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||| |||||||||||||    
T  9264501 gggcctaactcatccttacaaaaccggcttgtaaagtgaggattgcct 9264548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 21832200 - 21832247
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||| |||||||||||||||    
T  21832200 gggcctaactcatccttacaaaaccggcttgtgaggtgaggattgcct 21832247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 22339844 - 22339797
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||  ||||||||||||||||||||    
T  22339844 gggcctaactcatccttacaaaaccgacttgtaaggtgaggattgcct 22339797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 22407442 - 22407489
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  22407442 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 22407489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 22407649 - 22407696
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  22407649 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 22407696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 29369894 - 29369847
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||| ||||||| ||||||||||||||||||||    
T  29369894 gggcctaactcatccttactaaaccggcttgtaaggtgaggattgcct 29369847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 31564004 - 31564051
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||||| |||||||||||| |||||||||||||| |||||    
T  31564004 gggcctaactcaactttacaaaaccggcttgtaaggtgaggagtgcct 31564051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 44573742 - 44573695
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  44573742 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 44573695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 44574039 - 44573992
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  44574039 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 44573992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 50203858 - 50203905
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  50203858 gggcctaactcatccttacaaaaccggtttataaggtgaggagtgcct 50203905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 51338446 - 51338489
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||| |||||||||||||| ||||||||||||||||||||    
T  51338446 ctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 51338489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 3985876 - 3985835
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  3985876 gggcctaactcatccttacaaaaccggcttgtaaggtgagga 3985835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 10453706 - 10453751
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||| |||||||||||||| |||||||||||||| |||||    
T  10453706 gcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 10453751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 35699978 - 35700023
Alignment:
Q  280 ttataaacacattgtcaagccatatctcattcaatgtgagactctt 325  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||    
T  35699978 ttataaacacattgtcatgccatatctcatcaaatgtgagactctt 35700023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 41380826 - 41380789
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtg 70  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  41380826 gggcctaactcaaccttacaaaaccggcttgtaaggtg 41380789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 51338404 - 51338445
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  51338404 gggcctaactcatccttacaaaaccggcttgtaaggtgagga 51338445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 4155466 - 4155402
Alignment:
Q  153 gatagcgaaaacctgatggcaggtagcccaacga-tcttcgatagactctgataccatcttagaa 216  Q
    ||||||| ||||||||| |||||| |||||| || |||| || ||||||||||||||||||||||    
T  4155466 gatagcggaaacctgatagcaggtggcccaatgaatcttggagagactctgataccatcttagaa 4155402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 4191123 - 4191167
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||    
T  4191123 gggcctaactcatccttacaaaaccggcttgtaaggtcaggattg 4191167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 50338387 - 50338427
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  50338387 ctaactcaaccttacaaaaccggcttgtaaggtgaagattg 50338427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 9658348 - 9658301
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||| ||||||| ||||||||||| ||||||||||||||||| |||||    
T  9658348 gggcttaactcatccttacaaaacaggtttgtaaggtgaggaatgcct 9658301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 11414465 - 11414422
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    ||||||||||| |||||||||||||| || ||||||||||||||    
T  11414465 ggcctaactcatccttacaaaaccggcttctaaggtgaggattg 11414422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 13769292 - 13769339
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||| | |||||||||||||| |||||    
T  13769292 gggcctaactcatccttacaaaaccagcttgtaaggtgaggagtgcct 13769339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 21750578 - 21750531
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||||||||||| || |||||||||||||| |||||    
T  21750578 gggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcct 21750531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 25627921 - 25627968
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||||||||||||   ||||||||||||||||||||    
T  25627921 gggcctaactcatccttacaaaaccaacttgtaaggtgaggattgcct 25627968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 26366834 - 26366787
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||| |||  |||||||||||||||||||    
T  26366834 gggcctaactcatccttacaaaaacggcatgtaaggtgaggattgcct 26366787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 31563704 - 31563747
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||||||||||||| || ||||||||||| |||||    
T  31563704 ctaactcaaccttacaaaaccggcttctaaggtgaggagtgcct 31563747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 34715456 - 34715503
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||| ||||||| |||||||||||||| |||||||||||||| |||||    
T  34715456 gggcataactcatccttacaaaaccggcttgtaaggtgaggagtgcct 34715503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 35011967 - 35011920
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||||||||||||||||  ||||||||||| |||||    
T  35011967 gggcctaactcatccttacaaaaccggttcataaggtgaggagtgcct 35011920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 43101372 - 43101419
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||| |||||| ||||||||||||| ||||||||||||||| |||||    
T  43101372 gggccaaactcatccttacaaaaccgatttgtaaggtgaggagtgcct 43101419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 44573429 - 44573382
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||| |||||||| |||||    
T  44573429 gggcctaactcatccttacaaaaccggcttgtagggtgaggagtgcct 44573382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 53640173 - 53640220
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||| ||||||| ||||||| |||||| ||||||||||||||||||||    
T  53640173 gggcataactcatccttacataaccggcttgtaaggtgaggattgcct 53640220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 54369142 - 54369095
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||| |||||||||||||| ||||||| |||||    
T  54369142 gggcctaactcatccttacgaaaccggtttgtaaagtgaggagtgcct 54369095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 54591470 - 54591513
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||    
T  54591470 ctaactcatgcttacaaaaccggcttgtaaggtgaggattgcct 54591513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 14170005 - 14170047
Alignment:
Q  38 taactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||| |||||||||||||| |||||||||||||| |||||    
T  14170005 taactcatccttacaaaaccggcttgtaaggtgaggagtgcct 14170047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 38300754 - 38300800
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||| || ||||||||||| |||||||||||||| |||||    
T  38300754 ggcctaactcatccgtacaaaaccggcttgtaaggtgaggagtgcct 38300800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 45828087 - 45828041
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    ||||||||| |||||| |||||||||| |||| ||||||||||||||    
T  45828087 gggcctaacacaacctcacaaaaccggcttgtgaggtgaggattgcc 45828041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 1348867 - 1348904
Alignment:
Q  201 tgataccatcttagaatttgggttgagtctaactcaac 238  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  1348867 tgatatcatcttaaaatttgggttgagtctaactcaac 1348904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 9179236 - 9179195
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||  ||||||||||||||    
T  9179236 gggcctaactcatccttacaaaaccgacttgtaaggtgagga 9179195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 329
Target Start/End: Original strand, 11659746 - 11659799
Alignment:
Q  276 ctatttataaacacattgtcaagccatatctcattcaatgtgagactctttaac 329  Q
    |||||||||||||||||||||   ||| ||| |||| |||||||||||||||||    
T  11659746 ctatttataaacacattgtcagatcatctcttattcgatgtgagactctttaac 11659799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 24539257 - 24539216
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||| ||| ||||||||||||||    
T  24539257 gggcctaactcatccttacaaaatcggcttgtaaggtgagga 24539216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 34250352 - 34250393
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    ||||||||||||| |||||||||||||  |||||||||||||    
T  34250352 tgggcctaactcatccttacaaaaccgacttgtaaggtgagg 34250393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 34356843 - 34356884
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||| ||||||| |||||||||||||| ||||||||||||||    
T  34356843 gggcataactcatccttacaaaaccggcttgtaaggtgagga 34356884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 35011760 - 35011719
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| ||||||||||||||||  |||||||||||    
T  35011760 gggcctaactcatccttacaaaaccggttcataaggtgagga 35011719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 37223676 - 37223631
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||  |||||||||||||| ||||||||||| ||||||||    
T  37223676 gcctaactcttccttacaaaaccggcttgtaaggtgatgattgcct 37223631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 80
Target Start/End: Complemental strand, 37223834 - 37223801
Alignment:
Q  47 cttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||| ||||||||||||||||||||    
T  37223834 cttacaaaaccggcttgtaaggtgaggattgcct 37223801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 40337876 - 40337917
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    ||||||||||||| |||||||||| ||| |||||||||||||    
T  40337876 tgggcctaactcatccttacaaaatcggcttgtaaggtgagg 40337917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 42259011 - 42258966
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||| |||| ||||| ||| ||||||||||||||||||||    
T  42259011 gcctaactcatccttgcaaaatcggcttgtaaggtgaggattgcct 42258966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 43955326 - 43955379
Alignment:
Q  19 ttagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgag 72  Q
    |||||||| ||| || |||||||||||||||| ||||||||||  |||||||||    
T  43955326 ttagaatttgggttgagcctaactcaaccttataaaaccggttcataaggtgag 43955379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 48407588 - 48407547
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||| ||||||| |||||||||||||| ||||||||||||||    
T  48407588 gggcataactcatccttacaaaaccggcttgtaaggtgagga 48407547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 53639980 - 53640013
Alignment:
Q  47 cttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||| ||||||||||||||||||||    
T  53639980 cttacaaaaccggcttgtaaggtgaggattgcct 53640013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 1353517 - 1353473
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggatt 76  Q
    |||||||||| |||||  |||||||||||||||||||||| ||||    
T  1353517 tgggcctaacacaaccccacaaaaccggtttgtaaggtgatgatt 1353473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 11244545 - 11244589
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||| |||||||||||||| ||||| |||||||| |||||    
T  11244545 cctaactcatccttacaaaaccggcttgtacggtgaggagtgcct 11244589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 12799973 - 12799925
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcctt 81  Q
    |||| ||||||| || ||||||| | |||||||||||||||||||||||    
T  12799973 gggcttaactcatccatacaaaatcagtttgtaaggtgaggattgcctt 12799925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 24866266 - 24866218
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||| |||||  |||||||||| |||| |||||||||||||||    
T  24866266 tgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcct 24866218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 30326988 - 30326928
Alignment:
Q  19 ttagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||  ||| ||||||||||| || || |||||||||| |||||||||||||| ||||    
T  30326988 ttagaatctgggttgggcctaacttaaactcacaaaaccggcttgtaaggtgaggactgcc 30326928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 36108650 - 36108606
Alignment:
Q  36 cctaactcaa-ccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||||    
T  36108650 cctaactcaagccttacaaaaccgatttataaggtgaggattgcc 36108606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 38300287 - 38300331
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||| |||||||||||||| |||||||||| ||| |||||    
T  38300287 cctaactcatccttacaaaaccggcttgtaaggtggggagtgcct 38300331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 39956468 - 39956512
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||||| ||| ||||||||||| || |||||||||||||||||    
T  39956468 gggcctaattcatccttacaaaactggcttgtaaggtgaggattg 39956512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 47184537 - 47184573
Alignment:
Q  203 ataccatcttagaatttgggttgagtctaactcaaca 239  Q
    |||||||||||||||||| || |||||||||||||||    
T  47184537 ataccatcttagaatttgagtcgagtctaactcaaca 47184573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 49812261 - 49812221
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgag 72  Q
    ||||||||||||||| |||||||| ||| ||||||||||||    
T  49812261 tgggcctaactcaactttacaaaatcggcttgtaaggtgag 49812221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 50057132 - 50057092
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    |||||||||||| ||||||||||| || |||||||||||||    
T  50057132 gggcctaactcatccttacaaaactggcttgtaaggtgagg 50057092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 13637 - 13680
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  13637 ctaactcaaccttacaaaaccggcttgtaaggtgaggattgcct 13680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 20643 - 20597
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||||| |||||||||||| | |||||||||||||||||||    
T  20643 gggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcc 20597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 15101112 - 15101159
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  15101112 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 15101159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 16876831 - 16876878
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  16876831 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 16876878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 16877011 - 16877058
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  16877011 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 16877058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 28149896 - 28149849
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  28149896 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 28149849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 17147907 - 17147953
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  17147907 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 17147953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 466318 - 466367
Alignment:
Q  281 tataaacacattgtcaagccatatctcattcaatgtgagactctttaaca 330  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  466318 tataaacacattgtcaggccatatctcatccaatgtgggactctttaaca 466367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 5269278 - 5269322
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcctt 81  Q
    |||||||| |||||||||||||| |||||||||||||||||||||    
T  5269278 ctaactcatccttacaaaaccggcttgtaaggtgaggattgcctt 5269322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 1744843 - 1744890
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  1744843 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 1744890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 8144120 - 8144073
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  8144120 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 8144073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 10418339 - 10418386
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  10418339 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 10418386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 11313383 - 11313430
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||||||||||| || ||||||||||||||||||||    
T  11313383 gggcctaactcatccttacaaaactggcttgtaaggtgaggattgcct 11313430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 19712610 - 19712657
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||||    
T  19712610 gggcctaactcatccttacaaaaccagcttgtaaggtgaggattgcct 19712657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 24055110 - 24055157
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  24055110 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 24055157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 24558686 - 24558639
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  24558686 gggcctaactcatcctcacaaaaccggcttgtaaggtgaggattgcct 24558639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 10733439 - 10733480
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  10733439 gggcctaactcatccttacaaaaccggcttgtaaggtgagga 10733480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 12134484 - 12134525
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  12134484 gggcctaactcatccttacaaaaccggtttgtaaggttagga 12134525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 4356060 - 4356024
Alignment:
Q  38 taactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    ||||||||||||||||||||||||||||||| |||||    
T  4356060 taactcaaccttacaaaaccggtttgtaaggcgagga 4356024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 24558891 - 24558847
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||||||||| |||||||||||| | |||||||||||||||||    
T  24558891 gggcctaactcatccttacaaaaccagcttgtaaggtgaggattg 24558847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 13353270 - 13353223
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||| |||||  |||||||||| |||||||||||||||||||    
T  13353270 tgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcc 13353223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 16590283 - 16590240
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||| |||||||||||||| |||||| |||||||||||||    
T  16590283 ctaactcatccttacaaaaccggcttgtaaagtgaggattgcct 16590240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 16605097 - 16605140
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||| |||||||||||||| |||||| |||||||||||||    
T  16605097 ctaactcatccttacaaaaccggcttgtaaagtgaggattgcct 16605140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 19054592 - 19054549
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||| |||||||||||||| |||||||||||||| |||||    
T  19054592 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 19054549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 19712405 - 19712452
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||| ||| |||||||||| |||||||||    
T  19712405 gggcctaactcatccttacaaaatcggcttgtaaggtggggattgcct 19712452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 27914327 - 27914374
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||| |||| |||||    
T  27914327 gggcctaactcatccttacaaaaccggcttgtaaggtaaggagtgcct 27914374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 33796395 - 33796348
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||| |||||  |||||||||| |||||||||||||||||||    
T  33796395 tgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcc 33796348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 80
Target Start/End: Complemental strand, 3713284 - 3713254
Alignment:
Q  50 acaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||||||||||||||||||||||    
T  3713284 acaaaaccggtttgtaaggtgaggattgcct 3713254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 8427652 - 8427606
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||||||||||||||||  ||||| |||||||| |||||    
T  8427652 ggcctaactcaaccttacaaaaccgacttgtacggtgaggagtgcct 8427606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 9592385 - 9592439
Alignment:
Q  19 ttagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    |||||||| ||| ||||||| ||||||||||| |||||||| ||||||| |||||    
T  9592385 ttagaatttgggatgggcctgactcaaccttagaaaaccggcttgtaagatgagg 9592439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 11316946 - 11316900
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    ||||||||||||||||||||||||||| |||| | ||||||| ||||    
T  11316946 gggcctaactcaaccttacaaaaccggcttgtgaagtgaggagtgcc 11316900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 13317015 - 13316973
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||| |||||||||||||||||||||| ||||| |||||    
T  13317015 ctaactcatccttacaaaaccggtttgtaagatgagggttgcc 13316973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 24745752 - 24745811
Alignment:
Q  205 accatcttagaatttgggttgagtctaactcaacaaccttacaaaacctgcatgtaaggtga 266  Q
    ||||||||||||||||||||||| | ||||||||  |||| ||||||| || ||||||||||    
T  24745752 accatcttagaatttgggttgagccgaactcaac--cctttcaaaaccggcttgtaaggtga 24745811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 1469064 - 1469023
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| |||||||| |||||    
T  1469064 gggcctaactcatccttacaaaaccggcttgtaaggcgagga 1469023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 8566974 - 8567019
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||||||| |||||  ||||||||||||||| ||||||||||||    
T  8566974 tgggcctaacacaaccccacaaaaccggtttgtgaggtgaggattg 8567019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 19385649 - 19385597
Alignment:
Q  185 gatcttcgatagactctgataccatcttagaatttgggttgagtctaactcaac 238  Q
    |||||| ||||| || |||||||||||||||||||||| |||| ||||||||||    
T  19385649 gatcttggataggctttgataccatcttagaatttggg-tgagcctaactcaac 19385597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 2115364 - 2115324
Alignment:
Q  198 ctctgataccatcttagaatttgggttgagtctaactcaac 238  Q
    |||| ||||||||||||||||| ||||||| ||||||||||    
T  2115364 ctctaataccatcttagaattttggttgagcctaactcaac 2115324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 9601842 - 9601882
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgag 72  Q
    ||||||||||||| ||||||| |||||| ||||||||||||    
T  9601842 tgggcctaactcatccttacacaaccggcttgtaaggtgag 9601882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 25184312 - 25184268
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgc 78  Q
    ||||||||||| ||  |||||||||| ||||||||||||||||||    
T  25184312 ggcctaactcatccccacaaaaccggcttgtaaggtgaggattgc 25184268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 21538935 - 21538982
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  21538935 gggcctaaatcatccttacaaaaccggtttgtaaggtgaggattgcct 21538982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 29273067 - 29273114
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  29273067 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 29273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 29273226 - 29273273
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  29273226 gggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 29273273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 29272909 - 29272955
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  29272909 ggcctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 29272955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 17557710 - 17557771
Alignment:
Q  19 ttagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||| ||| |||||||||||||||||||||||| | | ||||||||||||| ||||||    
T  17557710 ttagaatttgggttgggcctaactcaaccttacaaaatcagcttgtaaggtgagggttgcct 17557771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 2104260 - 2104308
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||||| |||||||||||||| |||||||||||||| |||||    
T  2104260 tgggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 2104308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 9381202 - 9381154
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcctt 81  Q
    |||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  9381202 gggcctaactcatccttacaaagccggcttgtaaggtgaggattgcctt 9381154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 13031123 - 13031183
Alignment:
Q  14 aactattagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||| |||||||| ||| ||| |||||||||||| ||||||||| ||||||||||||||||    
T  13031123 aactcttagaatttgggttggacctaactcaaccctacaaaaccagtttgtaaggtgagga 13031183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 26366832 - 26366880
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  26366832 tgggcgtaactcatccttacaaaaccggcttgtaaggtgaggattgcct 26366880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 347162 - 347107
Alignment:
Q  17 tattagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgag 72  Q
    |||||||||| ||| ||| |||||||||||||||||||||| | ||||||||||||    
T  347162 tattagaatttgggttggccctaactcaaccttacaaaaccagcttgtaaggtgag 347107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 15392128 - 15392081
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||| |||||||||||||    
T  15392128 gggcctaactcatccttacaaaaccggcttgtaaagtgaggattgcct 15392081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 15392207 - 15392160
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||    
T  15392207 gggcctaactcatccttacaaaatcggcttgtaaggtgaggattgcct 15392160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 20735625 - 20735578
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||||||||||||| |||||    
T  20735625 gggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 20735578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 39649085 - 39649132
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  39649085 gggcataactcatccttacaaaaccggcttgtaaggtgaggattgcct 39649132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 80
Target Start/End: Original strand, 43361557 - 43361600
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||| |||||||||||||| ||||||||||||||||||||    
T  43361557 ctaactcatccttacaaaaccggcttgtaaggtgaggattgcct 43361600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 52846850 - 52846897
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  52846850 gggcttaactcatccttacaaaaccggcttgtaaggtgaggattgcct 52846897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 19609188 - 19609226
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  19609188 gcctaactcaaccttacaaaaccggcttgtaaggtgagg 19609226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 25799287 - 25799237
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcctttc 83  Q
    |||||||||||| ||||||||||| ||||  ||||||||||||||||||||    
T  25799287 gggcctaactcatccttacaaaactggttcataaggtgaggattgcctttc 25799237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 36332216 - 36332174
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  36332216 tgggcctaactcatccttacaaaaccggcttgtaaggtgagga 36332174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 38474385 - 38474339
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||||    
T  38474385 ggcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 38474339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 463084 - 463125
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  463084 gggcctaactcatccttacaaaaccggcttgtaaggtgagga 463125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 11149424 - 11149465
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  11149424 gggcctaactcatccttacaaaaccggcttgtaaggtgagga 11149465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 19937046 - 19937091
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||| |||||||||||||| |||||||||||||| |||||    
T  19937046 gcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 19937091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 31305812 - 31305767
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||| |||||||||||||| |||||||||||||| |||||    
T  31305812 gcctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 31305767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 40571631 - 40571586
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    ||||||||||||||||||||||||||   |||||||||||||||||    
T  40571631 tgggcctaactcaaccttacaaaaccaacttgtaaggtgaggattg 40571586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 43361762 - 43361803
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgc 78  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  43361762 ctaactcatccttacaaaaccggcttgtaaggtgaggattgc 43361803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 48558322 - 48558367
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgc 78  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||||    
T  48558322 gggcttaactcatccttacaaaaccggcttgtaaggtgaggattgc 48558367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 102084 - 102128
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    ||||||||||||| ||||||||||| |||||||||||||| ||||    
T  102084 gcctaactcaaccctacaaaaccggcttgtaaggtgaggaatgcc 102128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 10861787 - 10861743
Alignment:
Q  36 cctaactcaa-ccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||    
T  10861787 cctaactcaagccttacaaaaccggtttataaggtgaggattgcc 10861743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 11924990 - 11924950
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgag 72  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  11924990 tgggcctaacacaacctcacaaaaccggtttgtaaggtgag 11924950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 325
Target Start/End: Complemental strand, 39007468 - 39007307
Alignment:
Q  163 acctgatggcaggtagcccaacg-atcttcgatagactctgataccatcttagaatttgggttgagtctaactcaacaaccttacaaaacctgcatgtaa 261  Q
    |||||||  ||||| |||||||| || || ||||| || | |||||||||||||| |||| ||| |||||||| |||  |||||||||||| |   ||||    
T  39007468 acctgataacaggtggcccaacggatattggataggctttaataccatcttagaaattggattgggtctaacttaac--ccttacaaaaccggttggtaa 39007371  T
Q  262 ggtgaagactatatctatttataaacacattgtcaagccatatctcattcaatgtgagactctt 325  Q
    ||||| ||||   |||| ||||||||| ||  ||| | ||||| |||||||||||| |||||||    
T  39007370 ggtgaggactgcctctacttataaacatatgttcaggtcatatttcattcaatgtgggactctt 39007307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 39348354 - 39348414
Alignment:
Q  19 ttagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||| ||| | |||||||||| |||||  ||||||||||||||| ||||||||||||||    
T  39348354 ttagaaatcgtgttgggcctaacacaaccccacaaaaccggtttgtgaggtgaggattgcc 39348414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 4022126 - 4022173
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||||||||||| || |||||||||||||| |||||    
T  4022126 gggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcct 4022173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 15391922 - 15391875
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||| ||||| ||||||||||| || ||||||||||||||||||||    
T  15391922 gggccttactcatccttacaaaactggcttgtaaggtgaggattgcct 15391875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 17419886 - 17419843
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||| |||||||||||||| |||||||||||||| |||||    
T  17419886 ctaactcatccttacaaaaccggcttgtaaggtgaggagtgcct 17419843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 19809958 - 19809997
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtga 71  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  19809958 tgggcctaactcaaccttacaaaatcggcttgtaaggtga 19809997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 21765208 - 21765145
Alignment:
Q  16 ctattagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    ||||||||||||| | || |||||||||| ||| ||||||| || |||||||||||||| ||||    
T  21765208 ctattagaattcgagttgagcctaactcagcctaacaaaactggcttgtaaggtgaggactgcc 21765145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 22892434 - 22892481
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||||| |||| ||||||||| |||||    
T  22892434 gggcctaactcatccttacaaaaccggattgtgaggtgaggagtgcct 22892481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 35024461 - 35024508
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||| || |||||||||||||| |||||||||||||| |||||    
T  35024461 gggcctaacccatccttacaaaaccggcttgtaaggtgaggagtgcct 35024508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 35926249 - 35926296
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||| | |||||||||||||| |||||    
T  35926249 gggcctaactcatccttacaaaaccagcttgtaaggtgaggagtgcct 35926296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 322
Target Start/End: Complemental strand, 38076454 - 38076320
Alignment:
Q  186 atcttcgatagactctgataccatcttagaatttgggttgagtctaactcaacaaccttacaaaacctgcatgtaaggtgaagacta-tatctatttata 284  Q
    ||||| |||||||||||| ||||||||||||||||||||    ||||   | || |||||||||||| |  ||||||||||  | || |  ||| |||||    
T  38076454 atcttggatagactctgaaaccatcttagaatttgggtttgtcctaa---atcacccttacaaaaccggtttgtaaggtgagaaatactcactacttata 38076358  T
Q  285 aacacattgtcaagccatatctcattcaatgtgagact 322  Q
    |||||||  |||||||||||||||||||  ||||||||    
T  38076357 aacacatattcaagccatatctcattcagcgtgagact 38076320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 43423382 - 43423335
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||||||||||| || |||||||||||||| |||||    
T  43423382 gggcctaactcatccttacaaaactggcttgtaaggtgaggagtgcct 43423335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 46098580 - 46098533
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||| ||||||||| ||||| ||||||||||||||    
T  46098580 gggcctaactcatccttgcaaaaccggcttgtatggtgaggattgcct 46098533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 2516924 - 2516970
Alignment:
Q  192 gatagactctgataccatcttagaatttgggttgagtctaactcaac 238  Q
    |||||||| |||||| |||| |||||||| |||||||||||||||||    
T  2516924 gatagactttgatacaatctaagaatttgtgttgagtctaactcaac 2516970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 7525088 - 7525050
Alignment:
Q  35 gcctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  7525088 gcctaactcaaccttacaaaaccagcttgtaaggtgagg 7525050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 10239535 - 10239493
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    ||||||||||||||||||||||||| || ||||||| ||||||    
T  10239535 tgggcctaactcaaccttacaaaactggcttgtaagctgagga 10239493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 19609456 - 19609502
Alignment:
Q  193 atagactctgataccatcttagaattt-gggttgagtctaactcaac 238  Q
    ||||||||||||||||||||||||||| |||||| | ||||||||||    
T  19609456 atagactctgataccatcttagaatttcgggttgtgcctaactcaac 19609502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 20735853 - 20735811
Alignment:
Q  38 taactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||| |||||||||||||| |||||||||||||| |||||    
T  20735853 taactcatccttacaaaaccggcttgtaaggtgaggagtgcct 20735811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 20738713 - 20738751
Alignment:
Q  200 ctgataccatcttagaatttgggttgagtctaactcaac 238  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  20738713 ctgataccatcttagaatttgggatgagcctaactcaac 20738751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 21641401 - 21641447
Alignment:
Q  13 taactattagaattcggggtgggcctaactcaaccttacaaaaccgg 59  Q
    ||||| ||| |||| ||| ||||||||||||||||||||||||||||    
T  21641401 taactcttaaaatttgggttgggcctaactcaaccttacaaaaccgg 21641447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 25799223 - 25799177
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtt-tgtaaggtgaggattgcc 79  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||||    
T  25799223 ggcctaactcatccttacaaaaccagttctgtaaggtgaggattgcc 25799177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 38870951 - 38870997
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||| ||||||||||||||||  ||||||||||| |||||    
T  38870951 ggcctaactcatccttacaaaaccggttcttaaggtgaggagtgcct 38870997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 41590508 - 41590553
Alignment:
Q  192 gatagactctgataccatcttagaatttgggttgagtctaactcaac 238  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||    
T  41590508 gataggctctgataccatcttagaatttgggttg-gcctaactcaac 41590553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 41590536 - 41590586
Alignment:
Q  29 gggtgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||| |||||||||||||||||| ||||||| ||||||| ||||| |||||    
T  41590536 gggttggcctaactcaaccttacgaaaccggcttgtaagatgagggttgcc 41590586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 45403542 - 45403496
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||| |||||||||||| | |||||||||||||| |||||    
T  45403542 ggcctaactcatccttacaaaaccagcttgtaaggtgaggagtgcct 45403496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 51722356 - 51722310
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||| |||||||||||||| ||||| |||||||| |||||    
T  51722356 ggcctaactcatccttacaaaaccggcttgtacggtgaggagtgcct 51722310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 3951966 - 3951921
Alignment:
Q  280 ttataaacacattgtcaagccatatctcattcaatgtgagactctt 325  Q
    ||||||||||||| ||| | |||||||||||||||||| |||||||    
T  3951966 ttataaacacattttcaggtcatatctcattcaatgtgggactctt 3951921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 32344731 - 32344784
Alignment:
Q  185 gatcttcgatagactctgataccatcttagaatttgggttgagtctaactcaac 238  Q
    |||||| |||||||||| ||||||||||| || |||||||||  ||||||||||    
T  32344731 gatcttggatagactcttataccatcttaaaaattgggttgaacctaactcaac 32344784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 33879779 - 33879820
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||| | ||||||||||||||    
T  33879779 gggcctaactcatccttacaaaaccagcttgtaaggtgagga 33879820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 33964476 - 33964435
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgagga 74  Q
    |||||||||||| |||||||||||| | ||||||||||||||    
T  33964476 gggcctaactcatccttacaaaaccagcttgtaaggtgagga 33964435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 38076429 - 38076376
Alignment:
Q  19 ttagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtgag 72  Q
    |||||||| ||| | | ||||| ||| |||||||||||||||||||||||||||    
T  38076429 ttagaatttgggtttgtcctaaatcacccttacaaaaccggtttgtaaggtgag 38076376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 45264760 - 45264719
Alignment:
Q  38 taactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    ||||||| |||||||||||||| |||||||||||||| ||||    
T  45264760 taactcatccttacaaaaccggcttgtaaggtgaggagtgcc 45264719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 5222793 - 5222753
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||||| ||||| |||||||| |||||||||||||||||    
T  5222793 ctaactcatccttataaaaccggcttgtaaggtgaggattg 5222753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 7525107 - 7525052
Alignment:
Q  208 atcttagaatttgggttgagtctaactcaacaaccttacaaaacctgcatgtaaggtga 266  Q
    |||||||||||||| ||||| ||||||   ||||||||||||||| || ||||||||||    
T  7525107 atcttagaatttggattgagcctaact---caaccttacaaaaccagcttgtaaggtga 7525052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 9381003 - 9380959
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||||||||| |||||||||||||| |||||  ||||||||||    
T  9381003 gggcctaactcatccttacaaaaccggcttgtattgtgaggattg 9380959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 11584411 - 11584371
Alignment:
Q  185 gatcttcgatagactctgataccatcttagaatttgggttg 225  Q
    |||||| | |||||||||||||||| |||||||||||||||    
T  11584411 gatcttgggtagactctgataccatattagaatttgggttg 11584371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 13279561 - 13279609
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||| |||||||||||||||||| ||  |||||||||||| |||||||    
T  13279561 tgggcataactcaaccttacaaaatcgacttgtaaggtgagaattgcct 13279609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 19481393 - 19481429
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggt 69  Q
    |||||||||||| |||||||||||||| |||||||||    
T  19481393 gggcctaactcatccttacaaaaccggcttgtaaggt 19481429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 21428063 - 21428103
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    |||||||| ||| |||||||||||||||||||| |||||||    
T  21428063 ctaactcatcctcacaaaaccggtttgtaaggtaaggattg 21428103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 29409945 - 29409997
Alignment:
Q  13 taactattagaattcggggtgggcctaactcaa-ccttacaaaaccggtttgt 64  Q
    ||||| ||||||||  ||||||||||||||||| |||||||||||||| ||||    
T  29409945 taactcttagaatttagggtgggcctaactcaacccttacaaaaccggcttgt 29409997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 31789453 - 31789413
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgag 72  Q
    ||||||||| ||| |||||||||||||| ||||||||||||    
T  31789453 tgggcctaattcatccttacaaaaccggcttgtaaggtgag 31789413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 33342283 - 33342319
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgagg 73  Q
    |||||||| |||||||||||||| |||||||||||||    
T  33342283 ctaactcatccttacaaaaccggcttgtaaggtgagg 33342319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 38733293 - 38733229
Alignment:
Q  153 gatagcgaaaacctgatggcaggtagcccaacg-atcttcgatagactctgataccatcttagaa 216  Q
    ||||||| ||||||||| |||||| | |||| | ||||| || ||||||||||||||||||||||    
T  38733293 gatagcggaaacctgatagcaggtggtccaatggatcttggagagactctgataccatcttagaa 38733229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 2080 - 2127
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||||||||||| || ||||||||||||||||||||    
T  2080 gggcctaactcatccttacaaaactggcttgtaaggtgaggattgcct 2127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 13409 - 13362
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  13409 gggcctaactcatcctcacaaaaccggcttgtaaggtgaggattgcct 13362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 13616 - 13569
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||  ||||||||| ||||||||||||||||||||    
T  13616 gggcctaactcatcctcgcaaaaccggcttgtaaggtgaggattgcct 13569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 51674 - 51631
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  51674 ggcctaactcatccttacaaaaccggtttgtaaggcgaggattg 51631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 76955 - 76908
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| | |||||||||||| ||||||||||||||||||||    
T  76955 gggcctaactcatctttacaaaaccggcttgtaaggtgaggattgcct 76908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 2752 - 2793
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggat 75  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  2752 ggcctaactcaaccttacaaaaccggcttgtgaggtgaggat 2793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 2575 - 2535
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggattg 77  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  2575 ctaactcaaccttacaaaaccggcttgtgaggtgaggattg 2535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 161110 - 161162
Alignment:
Q  19 ttagaattcggggtgggcctaactcaaccttacaaaaccggtttgtaaggtga 71  Q
    ||||||||| || |||||||||||||||  ||||||||| |||||||||||||    
T  161110 ttagaattcaggttgggcctaactcaacgctacaaaaccagtttgtaaggtga 161162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 2948 - 2995
Alignment:
Q  33 gggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    |||||||||||| |||||||||||| | |||||| |||||||||||||    
T  2948 gggcctaactcatccttacaaaaccagcttgtaaagtgaggattgcct 2995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 1985 - 1938
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||| |||||  |||||||||| |||||||||||||||||||    
T  1985 tgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcc 1938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 2220 - 2173
Alignment:
Q  32 tgggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcc 79  Q
    |||||||||| |||||  |||||||||| |||||||||||||||||||    
T  2220 tgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcc 2173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 4244 - 4283
Alignment:
Q  37 ctaactcaaccttacaaaaccggtttgtaaggtgaggatt 76  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  4244 ctaactcatccttacaaaaccggcttgtaaggtgaggatt 4283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 13398 - 13356
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgaggattgc 78  Q
    ||||||||| |||||||||||| |||||| |||||||||||||    
T  13398 cctaactcatccttacaaaaccagtttgtgaggtgaggattgc 13356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 11039 - 10997
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgaggattgc 78  Q
    ||||||||| |||||||||||| |||||| |||||||||||||    
T  11039 cctaactcatccttacaaaaccagtttgtgaggtgaggattgc 10997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 14705 - 14663
Alignment:
Q  36 cctaactcaaccttacaaaaccggtttgtaaggtgaggattgc 78  Q
    ||||||||| |||||||||||| |||||| |||||||||||||    
T  14705 cctaactcatccttacaaaaccagtttgtgaggtgaggattgc 14663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 21265 - 21311
Alignment:
Q  34 ggcctaactcaaccttacaaaaccggtttgtaaggtgaggattgcct 80  Q
    ||||||||||| ||||||||||||   ||||||||||||||||||||    
T  21265 ggcctaactcatccttacaaaaccaacttgtaaggtgaggattgcct 21311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 24530 - 24575
Alignment:
Q  280 ttataaacacattgtcaagccatatctcattcaatgtgagactctt 325  Q
    |||||||| |||| ||| |||||||||||| |||||||||||||||    
T  24530 ttataaactcattttcacgccatatctcatccaatgtgagactctt 24575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University