View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17648_low_15 (Length: 317)
Name: NF17648_low_15
Description: NF17648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17648_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 14 - 227
Target Start/End: Original strand, 36809904 - 36810117
Alignment:
| Q |
14 |
aggagcaatacaaaaaatgcatttgatgtataagagacattaaatattaagaaagcctatataattaaaagcacctaaataagctatggaacttaaatga |
113 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |
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| T |
36809904 |
aggagcaatacaaaaaatgcatttgatgtataagagacattaaatattaagaaagcatatataattaaaagcacctaaataagctatagaacttaaatga |
36810003 |
T |
|
| Q |
114 |
gagaataagacattgaaaaacactaatatataagattatcacatagtatactttcctaaaattattacaaataatcttgacctagaatgtctaacttctt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36810004 |
gagaataagacattgaaaaacactaatatataagattatcacatagtatactttcctaaaattattacaaataatcttgacctagaatgtctaacttctt |
36810103 |
T |
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| Q |
214 |
ggacttgcaaggtc |
227 |
Q |
| |
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|||||||||||||| |
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| T |
36810104 |
ggacttgcaaggtc |
36810117 |
T |
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