View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17648_low_22 (Length: 248)

Name: NF17648_low_22
Description: NF17648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17648_low_22
NF17648_low_22
[»] chr2 (49 HSPs)
chr2 (5-231)||(31578485-31578707)
chr2 (1-142)||(44239083-44239220)
chr2 (1-143)||(36587357-36587493)
chr2 (1-143)||(37316701-37316839)
chr2 (1-142)||(32944391-32944528)
chr2 (1-143)||(11965840-11965978)
chr2 (40-143)||(14871953-14872056)
chr2 (1-142)||(37731087-37731224)
chr2 (69-142)||(2427886-2427959)
chr2 (46-142)||(1079010-1079106)
chr2 (46-143)||(14877077-14877174)
chr2 (1-139)||(8847534-8847669)
chr2 (1-143)||(19916702-19916843)
chr2 (42-144)||(26480975-26481077)
chr2 (40-140)||(18510757-18510857)
chr2 (2-139)||(30831802-30831935)
chr2 (42-129)||(43057148-43057235)
chr2 (1-86)||(9207636-9207717)
chr2 (52-136)||(39234073-39234157)
chr2 (117-151)||(10060468-10060502)
chr2 (1-60)||(40937034-40937088)
chr2 (1-63)||(12889799-12889856)
chr2 (1-86)||(22445968-22446053)
chr2 (1-63)||(36802943-36803000)
chr2 (1-59)||(42372526-42372580)
chr2 (1-60)||(26206894-26206949)
chr2 (1-64)||(33616512-33616573)
chr2 (1-73)||(34945047-34945115)
chr2 (1-60)||(18723641-18723695)
chr2 (1-60)||(28245775-28245829)
chr2 (1-60)||(34119622-34119676)
chr2 (1-64)||(36644045-36644104)
chr2 (1-60)||(40700242-40700297)
chr2 (117-146)||(1574611-1574640)
chr2 (1-59)||(2221040-2221093)
chr2 (1-30)||(3091787-3091816)
chr2 (1-71)||(9647178-9647244)
chr2 (1-71)||(9990737-9990803)
chr2 (1-61)||(12784365-12784423)
chr2 (1-63)||(18254176-18254234)
chr2 (116-153)||(19913941-19913978)
chr2 (1-55)||(20911847-20911897)
chr2 (1-63)||(29449258-29449316)
chr2 (1-63)||(37737938-37738002)
chr2 (1-55)||(42678796-42678845)
chr2 (1-37)||(23352894-23352929)
chr2 (1-37)||(25881591-25881626)
chr2 (1-138)||(31922184-31922317)
chr2 (46-114)||(36417314-36417382)
[»] chr1 (54 HSPs)
chr1 (1-143)||(42468639-42468777)
chr1 (1-142)||(5771631-5771772)
chr1 (1-142)||(48858870-48859007)
chr1 (1-143)||(40439726-40439864)
chr1 (1-143)||(47642493-47642631)
chr1 (1-138)||(7918953-7919086)
chr1 (1-142)||(38878788-38878925)
chr1 (1-143)||(48983554-48983692)
chr1 (41-132)||(23332352-23332443)
chr1 (1-143)||(4213119-4213257)
chr1 (1-133)||(4857957-4858085)
chr1 (1-105)||(17082667-17082767)
chr1 (40-144)||(27742697-27742795)
chr1 (40-141)||(19442593-19442694)
chr1 (1-73)||(37685377-37685443)
chr1 (1-73)||(37700075-37700141)
chr1 (1-86)||(649815-649896)
chr1 (1-86)||(52437541-52437622)
chr1 (1-73)||(33100854-33100922)
chr1 (1-60)||(48326014-48326069)
chr1 (1-63)||(18336193-18336250)
chr1 (1-63)||(33054055-33054112)
chr1 (1-63)||(48220111-48220168)
chr1 (1-63)||(50775123-50775181)
chr1 (1-96)||(24806157-24806246)
chr1 (1-37)||(33358147-33358183)
chr1 (44-88)||(41070908-41070952)
chr1 (2-85)||(2571681-2571761)
chr1 (1-73)||(3851204-3851272)
chr1 (1-73)||(35369746-35369814)
chr1 (1-86)||(740897-740980)
chr1 (1-60)||(10890016-10890070)
chr1 (1-60)||(34040470-34040524)
chr1 (1-60)||(47820470-47820525)
chr1 (1-60)||(48624923-48624977)
chr1 (1-60)||(52362529-52362583)
chr1 (1-30)||(5477159-5477188)
chr1 (1-63)||(9987998-9988056)
chr1 (1-63)||(35136891-35136948)
chr1 (1-37)||(8200122-8200157)
chr1 (1-37)||(8411707-8411742)
chr1 (1-37)||(9008272-9008307)
chr1 (1-37)||(16986985-16987020)
chr1 (1-37)||(21486306-21486341)
chr1 (117-145)||(23554909-23554937)
chr1 (1-86)||(27465001-27465082)
chr1 (1-37)||(29586040-29586075)
chr1 (1-86)||(30745033-30745114)
chr1 (1-86)||(30766484-30766565)
chr1 (5-86)||(31088231-31088308)
chr1 (1-37)||(44632575-44632610)
chr1 (40-144)||(45008049-45008153)
chr1 (1-37)||(47214255-47214290)
chr1 (1-37)||(49241494-49241529)
[»] chr4 (49 HSPs)
chr4 (1-144)||(5386419-5386558)
chr4 (1-143)||(18315984-18316122)
chr4 (1-143)||(29227129-29227267)
chr4 (1-143)||(51577661-51577799)
chr4 (1-137)||(5932656-5932788)
chr4 (1-143)||(39158152-39158290)
chr4 (1-143)||(51255793-51255931)
chr4 (1-143)||(14443245-14443383)
chr4 (42-143)||(19651805-19651906)
chr4 (44-144)||(22813607-22813707)
chr4 (1-143)||(38519840-38519978)
chr4 (1-138)||(54000745-54000878)
chr4 (40-142)||(50506471-50506572)
chr4 (1-143)||(1816562-1816700)
chr4 (40-144)||(10146974-10147078)
chr4 (1-133)||(52204897-52205025)
chr4 (1-107)||(149407-149509)
chr4 (47-144)||(2004074-2004171)
chr4 (42-140)||(41262234-41262332)
chr4 (5-114)||(36130268-36130373)
chr4 (1-133)||(2738164-2738292)
chr4 (1-142)||(26600086-26600223)
chr4 (1-74)||(28458333-28458401)
chr4 (1-86)||(31574883-31574964)
chr4 (5-86)||(37997304-37997381)
chr4 (1-86)||(43175030-43175111)
chr4 (1-142)||(55266072-55266209)
chr4 (1-73)||(37297095-37297163)
chr4 (40-143)||(50050718-50050821)
chr4 (1-86)||(39478481-39478564)
chr4 (1-63)||(38338889-38338946)
chr4 (1-83)||(40348840-40348918)
chr4 (1-86)||(10250459-10250540)
chr4 (2-63)||(19232100-19232157)
chr4 (1-86)||(23369276-23369357)
chr4 (1-73)||(39440530-39440598)
chr4 (40-143)||(43902574-43902677)
chr4 (1-60)||(21617230-21617284)
chr4 (40-86)||(39654905-39654951)
chr4 (1-60)||(51573602-51573656)
chr4 (1-63)||(7632428-7632486)
chr4 (1-55)||(28657416-28657465)
chr4 (117-146)||(37977272-37977301)
chr4 (1-63)||(50890040-50890098)
chr4 (2-63)||(12138900-12138957)
chr4 (1-60)||(27408200-27408256)
chr4 (1-37)||(30079893-30079928)
chr4 (1-37)||(30170009-30170044)
chr4 (1-37)||(43769758-43769793)
[»] chr6 (32 HSPs)
chr6 (1-147)||(8505655-8505798)
chr6 (1-142)||(8645355-8645492)
chr6 (39-142)||(14910257-14910359)
chr6 (44-143)||(5739650-5739749)
chr6 (5-139)||(18064980-18065110)
chr6 (1-143)||(33712367-33712505)
chr6 (40-133)||(11635431-11635524)
chr6 (40-143)||(1286995-1287098)
chr6 (1-108)||(12588297-12588406)
chr6 (1-86)||(32316872-32316953)
chr6 (44-138)||(8990993-8991087)
chr6 (44-138)||(9015440-9015534)
chr6 (44-88)||(3772441-3772485)
chr6 (1-86)||(5080511-5080592)
chr6 (5-86)||(26595399-26595476)
chr6 (1-60)||(6531150-6531207)
chr6 (1-86)||(1376411-1376494)
chr6 (1-86)||(1384159-1384242)
chr6 (42-88)||(10375738-10375784)
chr6 (1-60)||(13143352-13143406)
chr6 (40-142)||(17182180-17182282)
chr6 (1-60)||(18141271-18141325)
chr6 (40-86)||(20998089-20998135)
chr6 (1-84)||(22079509-22079588)
chr6 (1-86)||(25127774-25127857)
chr6 (1-63)||(17551345-17551403)
chr6 (1-63)||(25811805-25811863)
chr6 (1-37)||(2075440-2075475)
chr6 (1-37)||(4820298-4820333)
chr6 (1-37)||(5327580-5327616)
chr6 (1-37)||(11547518-11547553)
chr6 (1-37)||(14986733-14986769)
[»] chr7 (43 HSPs)
chr7 (1-143)||(34978343-34978481)
chr7 (1-142)||(13152639-13152777)
chr7 (1-139)||(21103059-21103193)
chr7 (5-139)||(28249460-28249590)
chr7 (1-145)||(45419945-45420085)
chr7 (1-142)||(29723812-29723951)
chr7 (42-143)||(33845126-33845227)
chr7 (40-142)||(2008719-2008821)
chr7 (1-144)||(12007071-12007210)
chr7 (40-142)||(37352192-37352294)
chr7 (1-143)||(26749051-26749189)
chr7 (5-142)||(43807700-43807833)
chr7 (1-142)||(32777594-32777731)
chr7 (1-139)||(43081780-43081914)
chr7 (40-143)||(15325526-15325629)
chr7 (40-140)||(33057461-33057561)
chr7 (42-144)||(27570427-27570529)
chr7 (1-73)||(30941432-30941504)
chr7 (1-151)||(46880949-46881095)
chr7 (1-88)||(47448873-47448956)
chr7 (2-86)||(4292475-4292555)
chr7 (1-60)||(11564940-11564994)
chr7 (1-63)||(40854621-40854679)
chr7 (1-58)||(42584849-42584902)
chr7 (1-60)||(7817684-7817737)
chr7 (44-139)||(49103479-49103574)
chr7 (1-64)||(10055598-10055656)
chr7 (1-60)||(18111581-18111636)
chr7 (5-60)||(21559849-21559899)
chr7 (5-34)||(17945118-17945147)
chr7 (39-84)||(19643380-19643425)
chr7 (1-59)||(35452544-35452597)
chr7 (1-63)||(43942683-43942741)
chr7 (40-108)||(2300165-2300233)
chr7 (1-37)||(3937110-3937146)
chr7 (117-145)||(9031364-9031392)
chr7 (1-37)||(27163647-27163683)
chr7 (1-37)||(33180699-33180734)
chr7 (3-60)||(36352554-36352607)
chr7 (5-86)||(38956562-38956639)
chr7 (1-37)||(39231717-39231752)
chr7 (1-70)||(44189270-44189335)
chr7 (1-37)||(47078240-47078275)
[»] chr3 (55 HSPs)
chr3 (1-143)||(41443077-41443215)
chr3 (1-143)||(4494123-4494261)
chr3 (1-142)||(34307428-34307565)
chr3 (40-143)||(31104746-31104849)
chr3 (1-142)||(34456837-34456974)
chr3 (1-133)||(9692772-9692900)
chr3 (40-139)||(39713927-39714026)
chr3 (40-144)||(29525945-29526049)
chr3 (40-144)||(32145871-32145975)
chr3 (5-143)||(32362984-32363116)
chr3 (54-143)||(39099413-39099502)
chr3 (40-145)||(25188308-25188414)
chr3 (1-86)||(5114124-5114205)
chr3 (1-73)||(42358595-42358663)
chr3 (1-144)||(27168567-27168706)
chr3 (1-86)||(44813180-44813263)
chr3 (1-143)||(33472305-33472443)
chr3 (1-70)||(288772-288837)
chr3 (1-86)||(5244275-5244356)
chr3 (1-138)||(38671664-38671797)
chr3 (1-86)||(38926674-38926755)
chr3 (1-86)||(41505537-41505618)
chr3 (1-71)||(33939282-33939350)
chr3 (1-73)||(35597208-35597276)
chr3 (1-72)||(6178383-6178450)
chr3 (40-86)||(41309198-41309244)
chr3 (5-111)||(34064024-34064126)
chr3 (1-63)||(49761354-49761411)
chr3 (40-88)||(8502832-8502880)
chr3 (44-88)||(20221569-20221613)
chr3 (1-86)||(20547934-20548015)
chr3 (42-133)||(27089869-27089960)
chr3 (1-86)||(27541446-27541527)
chr3 (1-86)||(55361177-55361258)
chr3 (1-73)||(50314671-50314739)
chr3 (40-86)||(13348078-13348124)
chr3 (1-64)||(48353043-48353102)
chr3 (56-138)||(54870485-54870567)
chr3 (1-34)||(8847156-8847189)
chr3 (1-59)||(26452693-26452747)
chr3 (117-150)||(42102395-42102428)
chr3 (40-133)||(48346908-48347001)
chr3 (1-114)||(52254053-52254163)
chr3 (1-63)||(52714780-52714838)
chr3 (1-37)||(8821677-8821712)
chr3 (1-37)||(8846538-8846573)
chr3 (1-60)||(9719420-9719477)
chr3 (1-37)||(26996363-26996398)
chr3 (1-37)||(32767723-32767758)
chr3 (1-37)||(33375907-33375942)
chr3 (117-145)||(36869722-36869750)
chr3 (1-37)||(44677473-44677508)
chr3 (3-60)||(44813417-44813470)
chr3 (91-143)||(53681184-53681236)
chr3 (1-37)||(54773742-54773778)
[»] chr8 (54 HSPs)
chr8 (5-143)||(25987673-25987807)
chr8 (1-146)||(44061764-44061905)
chr8 (1-142)||(44090933-44091070)
chr8 (40-143)||(28772012-28772115)
chr8 (1-144)||(1068653-1068792)
chr8 (1-143)||(26026943-26027081)
chr8 (42-142)||(9630207-9630307)
chr8 (1-146)||(33451448-33451587)
chr8 (40-143)||(15716862-15716965)
chr8 (1-142)||(34435624-34435761)
chr8 (1-143)||(33107753-33107891)
chr8 (39-143)||(12241153-12241257)
chr8 (1-141)||(2730849-2730985)
chr8 (51-142)||(37172153-37172244)
chr8 (5-119)||(44825493-44825603)
chr8 (40-133)||(45405880-45405973)
chr8 (5-105)||(5600911-5601007)
chr8 (5-105)||(5639613-5639709)
chr8 (1-64)||(34718162-34718220)
chr8 (44-145)||(9629649-9629750)
chr8 (40-141)||(17775312-17775413)
chr8 (40-141)||(36874001-36874102)
chr8 (1-86)||(32501140-32501221)
chr8 (5-63)||(41639764-41639820)
chr8 (1-60)||(30439476-30439530)
chr8 (1-67)||(8671518-8671580)
chr8 (1-63)||(9549166-9549223)
chr8 (5-63)||(16613685-16613738)
chr8 (52-136)||(4672085-4672169)
chr8 (5-86)||(31249468-31249545)
chr8 (1-60)||(5277674-5277728)
chr8 (1-60)||(41159859-41159913)
chr8 (1-63)||(6991775-6991832)
chr8 (1-63)||(10902751-10902809)
chr8 (1-63)||(29028928-29028985)
chr8 (1-63)||(35067207-35067265)
chr8 (1-74)||(36885444-36885511)
chr8 (1-34)||(43397827-43397860)
chr8 (1-37)||(1633879-1633914)
chr8 (1-37)||(6968221-6968257)
chr8 (1-37)||(11017852-11017887)
chr8 (1-86)||(11253486-11253567)
chr8 (5-62)||(12898897-12898950)
chr8 (77-133)||(15794935-15794991)
chr8 (1-86)||(22719486-22719567)
chr8 (1-86)||(27325804-27325885)
chr8 (1-37)||(28646718-28646754)
chr8 (1-37)||(28651302-28651338)
chr8 (1-60)||(32020433-32020490)
chr8 (1-37)||(33589219-33589254)
chr8 (117-156)||(36524625-36524665)
chr8 (2-63)||(36816583-36816640)
chr8 (1-37)||(41521015-41521050)
chr8 (1-37)||(45529235-45529270)
[»] scaffold0618 (1 HSPs)
scaffold0618 (1-142)||(8840-8977)
[»] chr5 (45 HSPs)
chr5 (1-139)||(13089672-13089806)
chr5 (44-143)||(17097689-17097787)
chr5 (40-141)||(39195826-39195927)
chr5 (1-141)||(21210865-21211001)
chr5 (44-145)||(32872782-32872883)
chr5 (1-142)||(611911-612048)
chr5 (1-140)||(42446180-42446315)
chr5 (44-139)||(19981876-19981971)
chr5 (1-144)||(11954478-11954617)
chr5 (40-138)||(12739854-12739951)
chr5 (40-138)||(12802677-12802774)
chr5 (44-142)||(31748422-31748520)
chr5 (40-136)||(35075471-35075567)
chr5 (40-138)||(36562944-36563042)
chr5 (1-86)||(33037566-33037647)
chr5 (59-146)||(32284705-32284791)
chr5 (5-86)||(5168233-5168310)
chr5 (1-74)||(20770178-20770246)
chr5 (1-86)||(35646429-35646510)
chr5 (2-142)||(16971987-16972123)
chr5 (1-73)||(19521960-19522028)
chr5 (40-83)||(32478442-32478485)
chr5 (1-73)||(36738994-36739062)
chr5 (1-61)||(38493671-38493727)
chr5 (40-133)||(29463077-29463170)
chr5 (1-86)||(7287133-7287214)
chr5 (1-63)||(8097296-8097356)
chr5 (117-152)||(38387867-38387902)
chr5 (1-57)||(41175679-41175730)
chr5 (117-151)||(91372-91406)
chr5 (1-60)||(3640167-3640221)
chr5 (1-60)||(8675403-8675457)
chr5 (1-60)||(43196595-43196649)
chr5 (5-63)||(4719701-4719755)
chr5 (1-63)||(7076535-7076593)
chr5 (1-63)||(25871413-25871470)
chr5 (1-37)||(1839334-1839369)
chr5 (1-37)||(8267809-8267844)
chr5 (1-37)||(15478705-15478740)
chr5 (117-145)||(15639542-15639570)
chr5 (1-37)||(16437553-16437589)
chr5 (1-37)||(18842310-18842345)
chr5 (7-86)||(27546116-27546193)
chr5 (1-37)||(35098994-35099029)
chr5 (117-145)||(36581353-36581381)
[»] scaffold0201 (1 HSPs)
scaffold0201 (1-142)||(8519-8656)
[»] scaffold0276 (1 HSPs)
scaffold0276 (1-142)||(1691-1828)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-140)||(101790-101930)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-144)||(10983-11120)
[»] scaffold0184 (1 HSPs)
scaffold0184 (44-142)||(13444-13542)
[»] scaffold0078 (1 HSPs)
scaffold0078 (44-142)||(59302-59400)
[»] scaffold0432 (1 HSPs)
scaffold0432 (5-143)||(6406-6540)
[»] scaffold0067 (1 HSPs)
scaffold0067 (3-86)||(35569-35650)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-139)||(28217-28351)
[»] scaffold0532 (1 HSPs)
scaffold0532 (1-60)||(11011-11065)


Alignment Details
Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 5 - 231
Target Start/End: Original strand, 31578485 - 31578707
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaaca 104  Q
    |||||||||||||||||||||||||||||||||    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31578485 tctctcatactcacattattcttttactttatc----tctctattgctttgatttttgtgtcactacctaaatttctttgtataagttagttgtccaaca 31578580  T
Q  105 aattgtcacaagaaatggttgttcaaatatcattgctctatataatatcactacaaattgaaataataatcaacaaaacgtggatgcagttaacaatgtg 204  Q
    | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31578581 agttgtcacaagaaatgattgttcaaatatcattgctctatataatatcactacaaattgaaataataatcaacaaaacgttgatgcagttaacaatgtg 31578680  T
Q  205 aactggttgcatgcttatagctacatt 231  Q
    ||||||||||||||||||| |||||||    
T  31578681 aactggttgcatgcttataactacatt 31578707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 44239083 - 44239220
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||| | ||| |||||||||| ||||| ||||||    |||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||    
T  44239083 tttctcttttatattcacattattattttattttatc----tctctattgctttgatttttgtgtcactgcctaaatttctttgtataatttagttgtcc 44239178  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    || |||||||||||| ||||||||||||||||| ||||||||    
T  44239179 aaaaaattgtcacaataaatggttgttcaaataacattgctc 44239220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 36587493 - 36587357
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||||||||||||  ||||||| |      |||||||||||||||||||||||  ||||| |||||||||||||||||| ||||||||||    
T  36587493 tttctctctcatactcacattatcattttactct------ctctctattgctttgatttttgtgccactatctaaatttctttgtataatttagttgtcc 36587400  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    || |  |||||| |||||||||||||||||||| |||||||||    
T  36587399 aaaaggttgtcagaagaaatggttgttcaaataacattgctct 36587357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 37316839 - 37316701
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||| |||||| ||||| ||||||     |||||||||||||||||| ||||| |||||||||||||||||||||||||  | |||||||    
T  37316839 tttctctctcatacacacattgttcttctacttt----ctctctctattgctttgatatttgtgtcactacctaaatttctttgtataatgtggttgtcc 37316744  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||| |||||| |  ||| ||||||||||||| |||||||||    
T  37316743 aacaagttgtcatagaaaaaggttgttcaaataacattgctct 37316701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 32944528 - 32944391
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||| ||||||| | ||||||||||     |||||||||||||||||||||||| ||||||||||||||| ||| ||||| ||| ||||||    
T  32944528 tttctctctcatagtcacattctccttttacttt----ttctctctattgctttgatttttgtgtcactacctaaatttttttatataatttaattgtcc 32944433  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    || |  || ||||||||||||||| ||||||||| |||||||    
T  32944432 aaaaggttatcacaagaaatggttattcaaatatgattgctc 32944391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 11965840 - 11965978
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||| |||||| ||||| ||||||     ||||||||||||||||||||||||  ||||| |||||||||| |||||||  | |||||||    
T  11965840 tttctctctcatacacacattgttcttctacttt----ctctctctattgctttgatttttgtgccactatctaaatttctatgtataatgtggttgtcc 11965935  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||| ||||||||  ||| ||||||||||||| |||||||||    
T  11965936 aacaagttgtcacataaaaaggttgttcaaataacattgctct 11965978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 14871953 - 14872056
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||||| ||  ||||| ||||| |||| |||||||||||||||||||||| ||||     
T  14871953 tctctctattgttttgatttttgtgccactacctaaatttctttgtataatttgattgtctaacaagttgttacaagaaatggttgttcaaataacattt 14872052  T
Q  140 ctct 143  Q
    ||||    
T  14872053 ctct 14872056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 37731224 - 37731087
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||| |||||| ||||| ||||||  ||  ||||||||||||||||| |||||  ||||||||||||||||||||||||  | ||||| |    
T  37731224 tttctctctcatacacacattgttcttctacttt--cg--ctctctattgctttgatatttgtgccactacctaaatttctttgtataatgtggttgtgc 37731129  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    ||||| ||||||||  ||| ||||||||||||| ||||||||    
T  37731128 aacaagttgtcacataaaaaggttgttcaaataacattgctc 37731087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 2427959 - 2427886
Alignment:
Q  69 tacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  2427959 tacctaattttctttgtataatttagttgtccaacaaattgtcacaaaaaatggttgttcaaataacattgctc 2427886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 1079106 - 1079010
Alignment:
Q  46 tattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||||| || |  ||||||||||||||||||||||| ||| ||||||||    
T  1079106 tattgctttgatttttgtgtcactgcttaaatttctttgtataatttagttgtctaaaaggttgtcacaagaaatggttgttcatataacattgctc 1079010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 14877077 - 14877174
Alignment:
Q  46 tattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||| ||||||||||||  ||||||||||||||||||||  || || |||||| ||||| ||||||||||||||||||||||||||| |||| ||||    
T  14877077 tattgttttgatttttgtgccactacctaaatttctttgttaaatttggttgtctaacaagttgtcacaagaaatggttgttcaaataacatttctct 14877174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 8847534 - 8847669
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||| |||||||| |||||||||||| ||||||     |||||||||||||||||| ||| || ||||| ||||||||||||||||||    |||||||    
T  8847534 tttctttctcatacacacattattcttctacttt----ctctctctattgctttgatatttataccactatctaaatttctttgtataatgcggttgtcc 8847629  T
Q  101 aacaaattgtcaca-agaaatggttgttcaaatatcattg 139  Q
    ||||| |||||||| ||||| | ||||||||||| |||||    
T  8847630 aacaagttgtcacatagaaaagattgttcaaataacattg 8847669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 19916702 - 19916843
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||| |||||| ||||| ||||||     ||||||||||  |||||| ||||| ||||| |||||||||||||||||||  ||||| |||    
T  19916702 tttctctctcatacacacattgttcttctacttt----ctctctctattattttgatatttgtgtcactgcctaaatttctttgtataatgtagttatcc 19916797  T
Q  101 aacaaattgtcaca-ag--aaatggttgttcaaatatcattgctct 143  Q
    |||||||||||||| ||  ||| |||||||||||||  ||||||||    
T  19916798 aacaaattgtcacatagtaaaaaggttgttcaaataatattgctct 19916843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 26481077 - 26480975
Alignment:
Q  42 tctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgct 141  Q
    |||||||| ||||||||||||| |||||| ||||||  |||||||||| || |||||  || || ||||||||| ||| ||||||||||||| |||||||    
T  26481077 tctctattactttgatttttgtgtcactatctaaatccctttgtataatttggttgtataagaagttgtcacaataaagggttgttcaaataacattgct 26480978  T
Q  142 cta 144  Q
    |||    
T  26480977 cta 26480975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 18510757 - 18510857
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    |||||||| | ||||||||||||| ||| ||||||||||||||||||| | || |||||| || |  |||||||||||||  |||||||||||| |||||    
T  18510757 tctctctacttctttgatttttgtgtcattacctaaatttctttgtattatttggttgtctaataggttgtcacaagaaaatgttgttcaaataacattg 18510856  T
Q  140 c 140  Q
    |    
T  18510857 c 18510857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 30831802 - 30831935
Alignment:
Q  2 ttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcca 101  Q
    |||||||||||||||||||| ||||| ||||||     |||||||||| |||||||||||||  ||||| ||||||  |||||||||| ||  ||||  |    
T  30831802 ttctctctcatactcacattgttcttctacttt----ctctctctattactttgatttttgtgccactatctaaatccctttgtataatttgattgtata 30831897  T
Q  102 acaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    | || ||||||||| ||||| ||||||||||| |||||    
T  30831898 agaagttgtcacaataaatgattgttcaaataacattg 30831935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 43057148 - 43057235
Alignment:
Q  42 tctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttca 129  Q
    |||||||||||||||||||||| ||||||| ||||||| ||| ||||| |||||||||||| | ||| |||||| ||||  |||||||    
T  43057148 tctctattgctttgatttttgtgtcactacttaaatttatttatataatttagttgtccaaaagattatcacaaaaaataattgttca 43057235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9207636 - 9207717
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||| |||||||||     |||||||||||||||| |||||||  |||||||| | || |||||||    
T  9207636 tttctctctcatactcacattatttttttacttt----ctctctctattgctttggtttttgtgccactacctcatttcctttgta 9207717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 136
Target Start/End: Complemental strand, 39234157 - 39234073
Alignment:
Q  52 tttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatca 136  Q
    ||||||||||||  ||| |||||||||||||||||| | || |||||| || |  |||||||||||||  |||||||||||||||    
T  39234157 tttgatttttgtgccaccacctaaatttctttgtattatttggttgtctaataggttgtcacaagaaaatgttgttcaaatatca 39234073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 151
Target Start/End: Original strand, 10060468 - 10060502
Alignment:
Q  117 aaatggttgttcaaatatcattgctctatataata 151  Q
    |||||||||||||||||||||||||||||||||||    
T  10060468 aaatggttgttcaaatatcattgctctatataata 10060502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 40937088 - 40937034
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||| |||||||||    ||||||||||||||||||||||    
T  40937088 tttctctctcatactcacattatt-ttttacttt----atctctctattgctttgatttt 40937034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 12889856 - 12889799
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||| ||||| ||||||    ||||||||||||||||||||||    
T  12889856 tttctctctcatactcacattatt-ttttaatttatc----tctctattgctttgatttttgt 12889799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 22446053 - 22445968
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    ||||||||| ||||||| |||||| ||||||||| ||  | ||||||||||||| |||||||| ||| ||||| | || |||||||    
T  22446053 tttctctcttatactcatattatttttttactttttctctttctctattgctttaatttttgtgtcaatacctcatttcctttgta 22445968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 36802943 - 36803000
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||| |||||||||    ||||||||||| |||||||||||||    
T  36802943 tttctctctcatactcacattatt-ttttacttt----atctctctattactttgatttttgt 36803000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 42372526 - 42372580
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgattt 59  Q
    |||||||||||||||||||||||| |||||||||    ||||||||||| |||||||||    
T  42372526 tttctctctcatactcacattatttttttacttt----atctctctattcctttgattt 42372580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26206894 - 26206949
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||| ||||||||||||  ||||| |||||||||||||||    
T  26206894 tttctctctcatactcacattatt-ttttactttatc--tctct-tattgctttgatttt 26206949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33616512 - 33616573
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgta 64  Q
    ||||||||||||| ||| |||||  ||||||||| ||  |||||||||||||||||||||||||    
T  33616512 tttctctctcatattcatattatatttttactttctc--tctctctattgctttgatttttgta 33616573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 34945115 - 34945047
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacct 73  Q
    |||||||||||||||||||| ||  |||||||||     ||||||||||||||||||||||||  ||||||||    
T  34945115 tttctctctcatactcacatgatctttttacttt----ctctctctattgctttgatttttgtgccactacct 34945047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 18723641 - 18723695
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||| |||||||||    |||||| |||||||||||||||    
T  18723641 tttctctctcatactcacattatt-ttttacttt----atctctttattgctttgatttt 18723695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28245775 - 28245829
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||| |||||||||    ||||||||||||||||| ||||    
T  28245775 tttctctctcatactcacattatt-ttttacttt----atctctctattgctttggtttt 28245829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34119676 - 34119622
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||| |||||||||    |||||||||||| |||||||||    
T  34119676 tttctctctcatactcacattatt-ttttacttt----atctctctattgttttgatttt 34119622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36644104 - 36644045
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgta 64  Q
    ||||||| |||||||||||||||| ||||| |||    |||||||| |||||||||||||||||    
T  36644104 tttctctttcatactcacattatttttttaattt----atctctctgttgctttgatttttgta 36644045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 40700242 - 40700297
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||  |||||||||    ||||||||||| ||||||||||    
T  40700242 tttctctctcatactcacattatatttttacttt----atctctctattactttgatttt 40700297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 1574611 - 1574640
Alignment:
Q  117 aaatggttgttcaaatatcattgctctata 146  Q
    ||||||||||||||||||||||||||||||    
T  1574611 aaatggttgttcaaatatcattgctctata 1574640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2221040 - 2221093
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgattt 59  Q
    |||||||||||||||||||||||| ||| |||||    |||||||||||||||||||||    
T  2221040 tttctctctcatactcacattatt-tttcacttt----atctctctattgctttgattt 2221093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 3091787 - 3091816
Alignment:
Q  1 tttctctctcatactcacattattctttta 30  Q
    ||||||||||||||||||||||||||||||    
T  3091787 tttctctctcatactcacattattctttta 3091816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9647178 - 9647244
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactac 71  Q
    ||||||||||||||||| |||||  |||||||||     |||||||||||||||| ||||||| |||||||    
T  9647178 tttctctctcatactcatattatctttttacttt----ctctctctattgctttggtttttgtgtcactac 9647244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9990737 - 9990803
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactac 71  Q
    ||||||||| |||||||||||||  |||||||||     |||||||||||||||| |||||||| ||||||    
T  9990737 tttctctcttatactcacattatctttttacttt----ctctctctattgctttggtttttgtaccactac 9990803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12784423 - 12784365
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgattttt 61  Q
    |||||||||||||||||| ||||  ||||||||| ||  |||||||||| |||||||||||    
T  12784423 tttctctctcatactcacgttatatttttactttctc--tctctctattactttgattttt 12784365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18254234 - 18254176
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||  |||||||||     |||||||||||||||| |||||||    
T  18254234 tttctctctcatactcacattatctttttacttt----ctctctctattgctttggtttttgt 18254176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 19913941 - 19913978
Alignment:
Q  116 gaaatggttgttcaaatatcattgctctatataatatc 153  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  19913941 gaaatggttgttcaaatatcactactctatataatatc 19913978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20911847 - 20911897
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttg 55  Q
    ||||||||||||||||| |||||| |||||||||    |||||||||||||||||    
T  20911847 tttctctctcatactcaaattatttttttacttt----atctctctattgctttg 20911897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 29449258 - 29449316
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||  |||||||||     |||||||||| |||||||||||||    
T  29449258 tttctctctcatactcacattatatttttacttt----ctctctctattactttgatttttgt 29449316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 37738002 - 37737938
Alignment:
Q  1 tttctctctcatactcacattattctttta--ctttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||| | |||||  || | ||  ||||||||||||||||||||||||    
T  37738002 tttctctctcatactcacattacttttttactctctctctctctctctattgctttgatttttgt 37737938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42678796 - 42678845
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttg 55  Q
    |||||||||||||||||||||||| |||||||||    |||||||||||||||||    
T  42678796 tttctctctcatactcacattatt-ttttacttt----atctctctattgctttg 42678845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 23352929 - 23352894
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  23352929 tttctctctcatactcacattatt-ttttactttatc 23352894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 25881591 - 25881626
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  25881591 tttctctctcatactcacattatt-ttttactttatc 25881626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 31922317 - 31922184
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||| ||||||||| |  ||||||||||||    | ||||| | |||| |||| || | ||||||| |||||||||||| |  |||||||| |    
T  31922317 tttctctctcaaactcacattttctttttactttatc----tttctatcgttttggttttcgtgtaactacctgaatttctttgtaaattttagttgttc 31922222  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcatt 138  Q
    || || |||||  ||||||  |||||||||||| ||||    
T  31922221 aagaagttgtccaaagaaagagttgttcaaataacatt 31922184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 36417382 - 36417314
Alignment:
Q  46 tattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcaca 114  Q
    ||||||||||||||||||| ||| ||||||| || ||| |||||  | ||||||||| || ||||||||    
T  36417382 tattgctttgatttttgtaccaccacctaaacttttttatataacgtggttgtccaataagttgtcaca 36417314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 9e-51; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 42468639 - 42468777
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||| |||||||| ||||||||||||    ||| ||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  42468639 tttctctctcatacttacattattattttactttatc----tctttattgttttaatttttgtgtcactacctaaatttctttgtataagttagttgtcc 42468734  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42468735 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 42468777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 5771772 - 5771631
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||||||||||||  ||||||||| ||  ||| |||||||||||||||||| |  |||||||||||||||||||||||| |||||||||     
T  5771772 tttctctctcatactcacattatcattttactttctctctctatctattgctttgatttttctgccactacctaaatttctttgtataatttagttgtct 5771673  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    || |  ||||||||||||||| ||||||||||| ||||||||    
T  5771672 aaaaggttgtcacaagaaatgattgttcaaataacattgctc 5771631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 48858870 - 48859007
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||||||||||||  ||||||||  ||    |||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||    
T  48858870 tttctctctcatactcacattatcattttacttcctc----tctctattgctttgatttttgtgtcactatctaaatttctttgtataatttagttgtcc 48858965  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    || |  ||||||||||||||||||||||| ||| ||||||||    
T  48858966 aaaaggttgtcacaagaaatggttgttcatataacattgctc 48859007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 40439864 - 40439726
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||| |||||| ||||| ||||||     |||||||||||||||||| |||||  ||||||||||||||||||||||||  | |||||||    
T  40439864 tttctctctcatacacacattgttcttctacttt----ctctctctattgctttgatatttgtgacactacctaaatttctttgtataatgtggttgtcc 40439769  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||||||||||||  ||| ||||||||||||| |||||||||    
T  40439768 aacaaattgtcacataaaaaggttgttcaaataacattgctct 40439726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 47642631 - 47642493
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||||||||||||  | ||||||| ||    | ||||||||||| |||||||| |||||| |||||||||||||||||| || |||||||    
T  47642631 tttctctctcatactcacattatcatattactttctc----tttctattgctttaatttttgtgtcactatctaaatttctttgtataatttggttgtcc 47642536  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||| ||||| ||| ||||||||||||||||| |||||||||    
T  47642535 aacaagttgtcccaaaaaatggttgttcaaataacattgctct 47642493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 7919086 - 7918953
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||||| ||| | ||| |||||||||    |||||||| |||||||||||||  |||||||||||||||||||||||| || ||||||     
T  7919086 tttctctctcatactcatattgtccttctactttatc----tctctattactttgatttttgtgccactacctaaatttctttgtataatttggttgtct 7918991  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcatt 138  Q
    ||||| ||||||||||||| ||||||||||||| ||||    
T  7918990 aacaagttgtcacaagaaagggttgttcaaataacatt 7918953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 38878925 - 38878788
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||  |||||| ||||| |||||| ||    | |||||||||||||||||||| ||||||||||||||||||| |||||  |||||||||    
T  38878925 tttctctctcatatacacattgttcttctactttttc----tttctattgctttgatttttgtgtcactacctaaatttctttatataatatagttgtcc 38878830  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    ||||| ||||||||  |||  |||||||||||| ||||||||    
T  38878829 aacaagttgtcacataaaaatgttgttcaaataacattgctc 38878788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 48983692 - 48983554
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||||||||| ||| || |||||| ||    | ||||||||||||||||||||  || || ||||||||||||||| || || |||||||    
T  48983692 tttctctctcatactcacatgattattctactttctc----tttctattgctttgatttttgtgccattatctaaatttctttgtaaaatttggttgtcc 48983597  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||| ||||||||| |||||||||| | |||| |||||||||    
T  48983596 aacaagttgtcacaataaatggttgtaccaataacattgctct 48983554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 23332352 - 23332443
Alignment:
Q  41 ctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaat 132  Q
    ||||||||||||||||| ||||| | |||||||||||||||||||||||  | ||||||||||||||| |||||  ||| ||||||||||||    
T  23332352 ctctctattgctttgatatttgtgttactacctaaatttctttgtataatgtggttgtccaacaaattatcacataaaaaggttgttcaaat 23332443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 4213119 - 4213257
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||||||||| ||||| ||| ||     |||||||||| ||||||||||||| |||||| |||||| | ||| ||||| || |||||      
T  4213119 tttctctctcatactcacattgttcttctacctt----ctctctctattactttgatttttgtgtcactatctaaatctttttatataatttggttgtat 4213214  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    || || ||||||||| ||| ||||||||||||| |||||||||    
T  4213215 aagaagttgtcacaataaagggttgttcaaataacattgctct 4213257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 4857957 - 4858085
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||| | |||||| ||||| ||||||     |||||||||||||||||| |||||  |||||| |||||||||||||||||  | |||||||    
T  4857957 tttctctctcatgcacacattgttcttctacttt----ctctctctattgctttgatatttgtgccactacttaaatttctttgtataatgtggttgtcc 4858052  T
Q  101 aacaaattgtcacaagaaatggttgttcaaata 133  Q
    || ||||| |||||  ||| |||||||||||||    
T  4858053 aataaattatcacataaaaaggttgttcaaata 4858085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 17082767 - 17082667
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||| |||||||||||| || |||     |||||||||| ||||||| |||||  ||||||||||||||||||||||||  | |||||||    
T  17082767 tttctctctcatacacacattattcttctatttt----ctctctctattactttgatatttgtgccactacctaaatttctttgtataatatggttgtcc 17082672  T
Q  101 aacaa 105  Q
    |||||    
T  17082671 aacaa 17082667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 27742697 - 27742795
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    |||||||||||||||||||||||||      ||||||||||||||||||   | |||||||||||| |||| |||  ||| ||||||||||||| |||||    
T  27742697 tctctctattgctttgatttttgta------cctaaatttctttgtatagtgttgttgtccaacaagttgttacataaaaaggttgttcaaataacattg 27742790  T

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Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 19442593 - 19442694
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    |||||||||||||||| |||||||  ||  ||||| || ||||||||||  |||||||||||| || |||| |||  |||| |||||||||||| |||||    
T  19442593 tctctctattgctttggtttttgtgccaagacctatatatctttgtatattttagttgtccaataagttgttacataaaatagttgttcaaataacattg 19442692  T
Q  140 ct 141  Q
    ||    
T  19442693 ct 19442694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37685377 - 37685443
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacct 73  Q
    |||||||||||||||||||||||  |||||||||      ||||||||||||||||||||||| |||||||||    
T  37685377 tttctctctcatactcacattatctttttacttt------ctctctattgctttgatttttgtgtcactacct 37685443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37700141 - 37700075
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacct 73  Q
    |||||||||||||||||||||||  |||||||||      ||||||||||||||||||||||| |||||||||    
T  37700141 tttctctctcatactcacattatctttttacttt------ctctctattgctttgatttttgtgtcactacct 37700075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 649815 - 649896
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||  |||||||||     |||||||||||||||| ||||||| ||||||||| | || |||||||    
T  649815 tttctctctcatactcacattatctttttacttt----ctctctctattgctttggtttttgtgtcactacctcatttcctttgta 649896  T

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Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 52437541 - 52437622
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||  |||||||||    |||| ||||||||||||||||| |||||| ||| ||| ||| ||||||    
T  52437541 tttctctctcatactcacattatatttttacttt----atctttctattgctttgattttcgtatcaatacataattttatttgta 52437622  T

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Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 33100854 - 33100922
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacct 73  Q
    |||||||||||||||||||||||  |||||||||     ||||||||||| |||||||||||| |||||||||    
T  33100854 tttctctctcatactcacattatctttttacttt----ctctctctattgttttgatttttgtgtcactacct 33100922  T

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Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 48326014 - 48326069
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    ||||||||||||||| |||||||| |||||||||    ||||||||||||||||||||||    
T  48326014 tttctctctcatacttacattatttttttacttt----atctctctattgctttgatttt 48326069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18336193 - 18336250
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||| | ||||||||||||    ||||||||||||||||||||||    
T  18336193 tttctctctcatactcacattagt-ttttactttatc----tctctattgctttgatttttgt 18336250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 33054112 - 33054055
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||| |||||||||    |||||||||| ||||||||||||||    
T  33054112 tttctctctcatactcacattatt-ttttacttt----atctctctatggctttgatttttgt 33054055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 48220168 - 48220111
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||| |||||||||    ||||||||||| |||||||||||||    
T  48220168 tttctctctcatactcacattatt-ttttacttt----atctctctatttctttgatttttgt 48220111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 50775181 - 50775123
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||  |||||||||    ||||||||||||||||| |||||||    
T  50775181 tttctctctcatactcacattatgtttttacttt----atctctctattgctttggtttttgt 50775123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 24806246 - 24806157
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagtt 96  Q
    ||||||||||||||||| |||||  ||||||||||||      ||  |||||||||||||||| |||||  |||||||||||| ||||| ||||||    
T  24806246 tttctctctcatactcatattatcattttactttatc------tcgtttgctttgatttttgtgtcactgtctaaatttctttatataatttagtt 24806157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33358183 - 33358147
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  33358183 tttctctctcatactcacattatttttttactttatc 33358147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 41070908 - 41070952
Alignment:
Q  44 tctattgctttgatttttgtatcactacctaaatttctttgtata 88  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||    
T  41070908 tctattgctttgatttttatgtcaatacctaaatttctttgtata 41070952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 2571681 - 2571761
Alignment:
Q  2 ttctctctcatactcacattattcttttactttatcgatctctctattgctttg-atttttgtatcactacctaaatttctttgt 85  Q
    |||||||||||| ||||||||| ||||||||||     ||||||||||| |||| |||||||| ||||||||| | |||||||||    
T  2571681 ttctctctcatagtcacattatccttttacttt----ttctctctattgttttgtatttttgtgtcactacctcattttctttgt 2571761  T

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Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3851204 - 3851272
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacct 73  Q
    |||||||||||||||||||||||  ||||||||    ||||||||||||| |||| ||||| | |||||||||    
T  3851204 tttctctctcatactcacattatctttttactt----gatctctctattgttttggtttttctgtcactacct 3851272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35369746 - 35369814
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacct 73  Q
    ||||| ||||||||||||||| |  |||||||||     |||||||||||||||||||||||| |||||||||    
T  35369746 tttctatctcatactcacattgtctttttacttt----ctctctctattgctttgatttttgtgtcactacct 35369814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 740980 - 740897
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||  ||||||||| ||  ||||||||||  |||| ||||||| | | ||| ||| ||||||||||    
T  740980 tttctctctcatactcacattatatttttactttctc--tctctctattattttggtttttgtgttaatacataattttctttgta 740897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 10890070 - 10890016
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||| | ||||||||||||    |||||||||||||||||||    
T  10890070 tttctctctcatactcacattact-ttttactttatc----tctctattgctttgatttt 10890016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34040524 - 34040470
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||| |||||||||    ||||||||||| ||||||||||    
T  34040524 tttctctctcatactcacattatt-ttttacttt----atctctctattactttgatttt 34040470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 47820525 - 47820470
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    ||||||| |||||||||||| ||| |||||||||    ||||||||||||||||||||||    
T  47820525 tttctctttcatactcacatcatttttttacttt----atctctctattgctttgatttt 47820470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 48624923 - 48624977
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    ||||||||| |||||||||||||| ||||||||||||    |||||||||||||||||||    
T  48624923 tttctctcttatactcacattatt-ttttactttatc----tctctattgctttgatttt 48624977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 52362529 - 52362583
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||| |||||||||    ||||||||||||||||| ||||    
T  52362529 tttctctctcatactcacattatt-ttttacttt----atctctctattgctttggtttt 52362583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 5477188 - 5477159
Alignment:
Q  1 tttctctctcatactcacattattctttta 30  Q
    ||||||||||||||||||||||||||||||    
T  5477188 tttctctctcatactcacattattctttta 5477159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9987998 - 9988056
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    ||||||| |||||||||||||||  |||||||||     ||||||||||||||||||||||||    
T  9987998 tttctctttcatactcacattatatttttacttt----ctctctctattgctttgatttttgt 9988056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35136891 - 35136948
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    ||||| |||||||||||||||| | ||||||||||||    ||||||||||||||||||||||    
T  35136891 tttctttctcatactcacattact-ttttactttatc----tctctattgctttgatttttgt 35136948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8200122 - 8200157
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8200122 tttctctctcatactcacattatt-ttttactttatc 8200157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8411742 - 8411707
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8411742 tttctctctcatactcacattatt-ttttactttatc 8411707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9008272 - 9008307
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  9008272 tttctctctcatactcacattatt-ttttactttatc 9008307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 16986985 - 16987020
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  16986985 tttctctctcatactcacattatt-ttttactttatc 16987020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21486341 - 21486306
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  21486341 tttctctctcatactcacattatt-ttttactttatc 21486306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 23554909 - 23554937
Alignment:
Q  117 aaatggttgttcaaatatcattgctctat 145  Q
    |||||||||||||||||||||||||||||    
T  23554909 aaatggttgttcaaatatcattgctctat 23554937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 27465082 - 27465001
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||| ||  |||||||||     |||||||||||||||| |||||||  |||||||| | || |||||||    
T  27465082 tttctctctcatactcacatgatctttttacttt----gtctctctattgctttggtttttgtgccactacctcatttcctttgta 27465001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 29586040 - 29586075
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  29586040 tttctctctcatactcacattatt-ttttactttatc 29586075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30745033 - 30745114
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    ||||||| ||||||||| |||||  ||||||||||||    ||||||||| |||| ||||||| ||| ||| ||| ||||||||||    
T  30745033 tttctctatcatactcatattataattttactttatc----tctctattgttttggtttttgtgtcaatacataattttctttgta 30745114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 30766484 - 30766565
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    ||||||| ||||||||| |||||  ||||||||||||    ||||||||| |||| ||||||| ||| ||| ||| ||||||||||    
T  30766484 tttctctatcatactcatattataattttactttatc----tctctattgttttggtttttgtgtcaatacataattttctttgta 30766565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 31088231 - 31088308
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||  |||||||||     |||||||||||||||| |||||||  |||||||| | ||| ||||||    
T  31088231 tctctcatactcacattatctttttacttt----ctctctctattgctttggtttttgtgccactacctcattttttttgta 31088308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 44632575 - 44632610
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  44632575 tttctctctcatactcacattatt-ttttactttatc 44632610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 45008153 - 45008049
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    |||||| |||| |||  ||||||||||| | | || |||||||||||||  ||  |||||||||||||| ||  || |||| |||||||||||| ||||     
T  45008153 tctctccattgttttagtttttgtatcaatccttacatttctttgtatattttgattgtccaacaaattatcttaaaaaattgttgttcaaataacattc 45008054  T
Q  140 ctcta 144  Q
    |||||    
T  45008053 ctcta 45008049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 47214255 - 47214290
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  47214255 tttctctctcatactcacattatt-ttttactttatc 47214290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 49241529 - 49241494
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  49241529 tttctctctcatactcacattatt-ttttactttatc 49241494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 5386419 - 5386558
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||| | |||| |||||||||||||||||| |||||||||     
T  5386419 tttctctctcatactcacattattcttttacttt----ctctctctattgctttgatttttgtgttactatctaaatttctttgtataatttagttgtct 5386514  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctcta 144  Q
    || || ||||||||||||||||||||||||||||||||||||||    
T  5386515 aaaaagttgtcacaagaaatggttgttcaaatatcattgctcta 5386558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 18315984 - 18316122
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||| |||||||||| ||  ||||||||| ||    | |||||||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  18315984 tttctctcttatactcacatcatcattttactttctc----tttctattgctttgatttttgtgtcactacctaaatttctttgtataatttggttgtcc 18316079  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||| |||||| |||||||||||||||||||| |||||||||    
T  18316080 aacaagttgtcataagaaatggttgttcaaataacattgctct 18316122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 29227267 - 29227129
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||| |||||| ||||| ||||||     |||||||||||||||||| ||||| |||||||||||||||||||||||||  | |||||||    
T  29227267 tttctctctcatacacacattgttcttctacttt----ctctctctattgctttgatatttgtgtcactacctaaatttctttgtataatatggttgtcc 29227172  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||||||||||||  ||| ||||||||||||| |||||||||    
T  29227171 aacaaattgtcacataaaaaggttgttcaaataacattgctct 29227129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 51577661 - 51577799
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||||| |||||  |||||||||     ||||||||||||||||||||||||  |||||||||||||||||| ||||| ||||||||||    
T  51577661 tttctctctcatactcatattatcattttacttt----ctctctctattgctttgatttttgtgccactacctaaatttctttatataatttagttgtcc 51577756  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    || |  |||||||||||||||||| ||||||||||| ||||||    
T  51577757 aaaaggttgtcacaagaaatggttattcaaatatcactgctct 51577799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 5932788 - 5932656
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||||||||||| |||||| | | || ||||    |||| |||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  5932788 tttctctctcatactcacattatccttttagtgtctctatct----attgttttgatttttgtgtcactacctaaatttctttgtataatttaattgtcc 5932693  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcat 137  Q
    || ||||||| | ||||||||||||||||||||||||    
T  5932692 aaaaaattgttagaagaaatggttgttcaaatatcat 5932656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 39158152 - 39158290
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||||||||||||||| |||||| ||    | ||||||| |||| |||||||  | |||||||||||||||||||||| || |||||||    
T  39158152 tttctctctcatactcacattattcttctactttctc----tttctattgttttggtttttgtgccgctacctaaatttctttgtataatttggttgtcc 39158247  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    || || ||||||||| ||||||||||||||||| |||||||||    
T  39158248 aataagttgtcacaataaatggttgttcaaataacattgctct 39158290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 51255793 - 51255931
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||||||||| ||| || ||||||     ||||||||||||||||||||||||  ||||| ||||||||||||||| || || |||||||    
T  51255793 tttctctctcatactcacatgattattctacttt----ctctctctattgctttgatttttgtgccactatctaaatttctttgtaaaatttggttgtcc 51255888  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||| ||||||||| |||||||||| |||||| |||||||||    
T  51255889 aacaagttgtcacaataaatggttgtacaaataacattgctct 51255931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 14443245 - 14443383
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||| | |||||| |||||||||     ||||||||||||||| ||||||    ||||||||||||| |||||||||| ||||||||||    
T  14443245 tttctctctcatacttatattattattttacttt----ctctctctattgctttaatttttacgccactacctaaattcctttgtataatttagttgtcc 14443340  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    || |  ||||||||| |||||||||||||||||||||||||||    
T  14443341 aaaaggttgtcacaaaaaatggttgttcaaatatcattgctct 14443383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 19651906 - 19651805
Alignment:
Q  42 tctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgct 141  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||| |||||||||||| |  ||||||||| |||||||||||||||||||||| ||    
T  19651906 tctctattactttgatttttatgtcactacctaaatttctttgtataatttagttgtccaaaaggttgtcacaaaaaatggttgttcaaatatcattact 19651807  T
Q  142 ct 143  Q
    ||    
T  19651806 ct 19651805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 22813707 - 22813607
Alignment:
Q  44 tctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||| |||||||||||||  |||||| ||||| |||||||||    
T  22813707 tctattgctttgatttttgtgtcactacctaaatttctttatataatttaattgtccaacaagttgtcacaagaaaaagttgtttaaataacattgctct 22813608  T
Q  144 a 144  Q
    |    
T  22813607 a 22813607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 38519840 - 38519978
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||||||||| ||| || ||||||     ||||||||||||||||||||||||  |||||  |||||||||||||| || || |||||||    
T  38519840 tttctctctcatactcacatgattattctacttt----ctctctctattgctttgatttttgtgccactatttaaatttctttgtaaaatttggttgtcc 38519935  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||| ||||||||| |||||||| | |||||| |||||||||    
T  38519936 aacaagttgtcacaataaatggttatacaaataacattgctct 38519978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 54000745 - 54000878
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||||||||||||  |||||||||     ||||||||||||||  |||| |||  |||||||||||||||||||||||| ||||||||||    
T  54000745 tttctctctcatactcacattatcattttacttt----ctctctctattgcttaaatttgtgtgccactacctaaatttctttgtataatttagttgtcc 54000840  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcatt 138  Q
    || |  ||||||||| |||| |||||||||||| ||||    
T  54000841 aaaaggttgtcacaataaatagttgttcaaataacatt 54000878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 50506471 - 50506572
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    |||| |||||||||||||||| ||  |||||||||||||||||||||||| |||||||||||| |  |||||||||||||| |||||||||||| |||||    
T  50506471 tctccctattgctttgatttt-gtgccactacctaaatttctttgtataatttagttgtccaaaaggttgtcacaagaaatagttgttcaaataacattg 50506569  T
Q  140 ctc 142  Q
    |||    
T  50506570 ctc 50506572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 1816700 - 1816562
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||| ||||||||||| |||||  ||||||||||||    |||||||||||||||||||||| ||||||||||| ||| ||| ||||| ||| |||||     
T  1816700 tttctttctcatactcatattatcattttactttatc----tctctattgctttgatttttgtgtcactacctaattttttttatataatttaattgtct 1816605  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    || | ||| |||||||||||| ||||||| ||| |||||||||    
T  1816604 aaaagattatcacaagaaatgattgttcatataacattgctct 1816562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 10147078 - 10146974
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||  ||||||||||| || |||||||||||| ||||| ||||| ||||     
T  10147078 tctctcttttgcttttatttttgtgtcactacctaaatttctttgtataatttgattgtccaacaagttatcacaagaaatgattgtttaaataacatta 10146979  T
Q  140 ctcta 144  Q
    |||||    
T  10146978 ctcta 10146974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 52204897 - 52205025
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||| ||||||||||||| || || ||||||     |||||||||||||||||||||||| ||||||| ||||||||||| ||||| || |||||||    
T  52204897 tttctctttcatactcacattgtttttctacttt----ctctctctattgctttgatttttgtgtcactacttaaatttctttttataatttggttgtcc 52204992  T
Q  101 aacaaattgtcacaagaaatggttgttcaaata 133  Q
    ||||| || ||| |||||| | |||||||||||    
T  52204993 aacaagttatcataagaaaagattgttcaaata 52205025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 149509 - 149407
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||||||||||||  ||  ||||| ||    |||||||||||||  ||||||| ||||||||||||||||||||||||  ||||||||||    
T  149509 tttctctctcatactcacattatgtttcaactttctc----tctctattgctttagtttttgtgtcactacctaaatttctttgtatattttagttgtcc 149414  T
Q  101 aacaaat 107  Q
    |||||||    
T  149413 aacaaat 149407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 2004171 - 2004074
Alignment:
Q  47 attgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctcta 144  Q
    ||||||||||||||||||||||||||||||||||||| ||| | ||  ||||| || |  || |||||||||| ||||||||||||| ||||||||||    
T  2004171 attgctttgatttttgtatcactacctaaatttctttatattatttgattgtctaataggttatcacaagaaaaggttgttcaaataacattgctcta 2004074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 140
Target Start/End: Complemental strand, 41262332 - 41262234
Alignment:
Q  42 tctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgc 140  Q
    ||||||||||||||||||||||  || || |||||||||||||||| | || |||||| || |  ||||||||||||| ||||||||||||| ||||||    
T  41262332 tctctattgctttgatttttgtgccattatctaaatttctttgtattatttggttgtctaataggttgtcacaagaaaaggttgttcaaataacattgc 41262234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 36130373 - 36130268
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaaca 104  Q
    |||||||||| |||||| ||||| |||||| ||    |||||||||| ||||||||||| ||| |||||||||||||||||||||  |  ||||||||||    
T  36130373 tctctcatacacacattgttcttctactttttc----tctctattgccttgatttttgtgtcattacctaaatttctttgtataatgtgattgtccaaca 36130278  T
Q  105 aattgtcaca 114  Q
    | ||||||||    
T  36130277 agttgtcaca 36130268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 2738292 - 2738164
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||| |||||||||  || ||||||     |||||||||| |||||||| ||||  ||| ||||||| |||||||||||| ||| ||||||    
T  2738292 tttctctctcatattcacattatctttctacttt----ctctctctatttctttgattgttgtgccacaacctaaaattctttgtataatttaattgtcc 2738197  T
Q  101 aacaaattgtcacaagaaatggttgttcaaata 133  Q
    || |  ||||||||||||||| ||||| |||||    
T  2738196 aaaaggttgtcacaagaaatgattgtttaaata 2738164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 26600223 - 26600086
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||| |||||| ||||| |||||| |     ||||||||||||| ||| ||||  ||||| |||| | | |||||||||  | |||||||    
T  26600223 tttctctctcatacacacattgttcttctactttctt----tctctattgcttttattattgtgccactatctaattctttttgtataatgtggttgtcc 26600128  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    ||||||||||||||  |||  |||||||||||| ||||||||    
T  26600127 aacaaattgtcacataaaaatgttgttcaaataacattgctc 26600086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28458401 - 28458333
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactaccta 74  Q
    |||||||||||||||||||||||| ||||||||||||    ||||||||||||||||||| || ||| ||||||    
T  28458401 tttctctctcatactcacattatt-ttttactttatc----tctctattgctttgattttcgtgtcaataccta 28458333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 31574964 - 31574883
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||  ||||| |||     |||||||||||||||||||||||||||| ||| | | ||||||||||    
T  31574964 tttctctctcatactcacattatatttttatttt----ctctctctattgctttgatttttgtatcaatacatgattttctttgta 31574883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 37997304 - 37997381
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||  |||||||||     |||||||||||||||||||||||| ||| ||||| | ||||||||||    
T  37997304 tctctcatactcacattatctttttacttt----ctctctctattgctttgatttttgtgtcaatacctcattttctttgta 37997381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 43175030 - 43175111
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||| |||||||||     ||||||||| |||||| ||||||| ||||||||| | || |||||||    
T  43175030 tttctctctcatactcacattatttttttacttt----ctctctctatggctttggtttttgtgtcactacctcatttcctttgta 43175111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 55266072 - 55266209
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||| ||||||| | ||||||||||     ||||| |||| ||||||||||||| |||||| ||||||   ||| ||||| ||||||||      
T  55266072 tttctctctcatattcacattgtccttttacttt----ctctctttattactttgatttttgtgtcactatctaaatccatttatataatttagttgtat 55266167  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    || || || |||||| ||| | ||||||||||| ||||||||    
T  55266168 aagaagttatcacaataaaggattgttcaaataacattgctc 55266209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37297095 - 37297163
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacct 73  Q
    |||||||||||||||||||||||  |||||||||     |||||||||||||||| ||||||| |||||||||    
T  37297095 tttctctctcatactcacattatctttttacttt----ctctctctattgctttggtttttgtgtcactacct 37297163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 50050718 - 50050821
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    |||||||| | ||||||||||| |  ||||| ||||||  |||||||||| ||||||||  || || ||||||||| |||| |||||||| ||| |||||    
T  50050718 tctctctaatactttgatttttatgccactatctaaatccctttgtataacttagttgtataaaaagttgtcacaataaatagttgttcatataacattg 50050817  T
Q  140 ctct 143  Q
    ||||    
T  50050818 ctct 50050821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 39478481 - 39478564
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    ||||||||||||||||| |||||| ||||||||  ||  ||||| |||| ||||||||||||| ||| ||||| | ||||||||||    
T  39478481 tttctctctcatactcatattatttttttactt--tctttctctatattactttgatttttgtgtcaatacctcattttctttgta 39478564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38338946 - 38338889
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||| | ||||||||||||    ||||||||||||||||||||||    
T  38338946 tttctctctcatactcacattact-ttttactttatc----tctctattgctttgatttttgt 38338889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 40348840 - 40348918
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttcttt 83  Q
    |||||||||||||||||||||||  |||||||||     |||||||||||||||| ||||||| |||||| || | |||||||    
T  40348840 tttctctctcatactcacattatctttttacttt----ctctctctattgctttggtttttgtgtcactatctcattttcttt 40348918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 10250540 - 10250459
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||  |||||||||     |||||||||||||||| |||||||  |||||| | | ||||||||||    
T  10250540 tttctctctcatactcacattatctttttacttt----ctctctctattgctttggtttttgtgccactacttcattttctttgta 10250459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 19232157 - 19232100
Alignment:
Q  2 ttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    ||||||||||||||||||||||  |||||||||     ||||||||||||||||||||||||    
T  19232157 ttctctctcatactcacattatatttttacttt----ctctctctattgctttgatttttgt 19232100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 23369357 - 23369276
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||| ||||||||||||  |||||||||    ||||||||||||||||| |||||||  |||||||| | || |||||||    
T  23369357 tttctctctcttactcacattatctttttacttt----atctctctattgctttggtttttgtgccactacctcatttcctttgta 23369276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39440530 - 39440598
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacct 73  Q
    ||||||| ||||||||||||| |  |||||||||     |||||||||||||||||||||||| |||||||||    
T  39440530 tttctctttcatactcacattttcattttacttt----ctctctctattgctttgatttttgtgtcactacct 39440598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 43902677 - 43902574
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    |||||||||||||||||| ||| | ||| || |||||||||||| | |||  | ||||||||| ||||||||| |  ||| ||||||| || || |||||    
T  43902677 tctctctattgctttgatatttatgtcattatctaaatttctttttctaacgtggttgtccaataaattgtcatataaaaaggttgtttaagtaacattg 43902578  T
Q  140 ctct 143  Q
    ||||    
T  43902577 ctct 43902574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21617230 - 21617284
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||| |||||||||    |||||||||||| |||||||||    
T  21617230 tttctctctcatactcacattatt-ttttacttt----atctctctattgttttgatttt 21617284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 39654905 - 39654951
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||| ||| ||||| | ||||||||||    
T  39654905 tctctctattgctttgatttttgtgtcaatacctcattttctttgta 39654951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 51573656 - 51573602
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    ||||||| |||||||||||||||| ||||||||||||    |||||||||||||||||||    
T  51573656 tttctctttcatactcacattatt-ttttactttatc----tctctattgctttgatttt 51573602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7632486 - 7632428
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    ||||||| |||||||||||||||  |||||||||     ||||||||||||||||||||||||    
T  7632486 tttctctttcatactcacattatatttttacttt----ctctctctattgctttgatttttgt 7632428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 28657465 - 28657416
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttg 55  Q
    |||||||||||||||||||||||| |||||||||    |||||||||||||||||    
T  28657465 tttctctctcatactcacattatt-ttttacttt----atctctctattgctttg 28657416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 146
Target Start/End: Original strand, 37977272 - 37977301
Alignment:
Q  117 aaatggttgttcaaatatcattgctctata 146  Q
    ||||||||||||||||||||||||||||||    
T  37977272 aaatggttgttcaaatatcattgctctata 37977301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 50890098 - 50890040
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||  |||| ||||     ||||||||||||||||||||||||    
T  50890098 tttctctctcatactcacattatatttttgcttt----ctctctctattgctttgatttttgt 50890040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 12138900 - 12138957
Alignment:
Q  2 ttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    ||||||||  ||||||||||||| |||||||||    ||||||||||| |||||||||||||    
T  12138900 ttctctcttctactcacattatttttttacttt----atctctctattactttgatttttgt 12138957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27408200 - 27408256
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    ||||| ||||||||| |||||| | ||||||||||||  |||||||||||||||||||||    
T  27408200 tttctttctcatacttacattact-ttttactttatc--tctctctattgctttgatttt 27408256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 30079893 - 30079928
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  30079893 tttctctctcatactcacattatt-ttttactttatc 30079928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30170044 - 30170009
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  30170044 tttctctctcatactcacattatt-ttttactttatc 30170009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43769758 - 43769793
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  43769758 tttctctctcatactcacattatt-ttttactttatc 43769793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 3e-44; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 8505798 - 8505655
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagtt-agttgtc 99  Q
    ||||||||||||| ||||||||| ||||||||||     |||||||||||||||||||||||||  ||||||||||||||||||||||| || |||||||    
T  8505798 tttctctctcatattcacattatccttttacttt----ttctctctattgctttgatttttgtacaactacctaaatttctttgtataatttaagttgtc 8505703  T
Q  100 caacaaattgtcacaagaaatggttgttcaaatatcattgctctatat 147  Q
    ||| |||||||||||||||||| |||||||||||||||||||||||||    
T  8505702 caaaaaattgtcacaagaaatgattgttcaaatatcattgctctatat 8505655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 8645355 - 8645492
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||||||||||| ||||||||||     |||||||||||||||||||| ||  ||||||||||||||||||||||||| ||||||||||    
T  8645355 tttctctctcatactcacattatccttttacttt----ctctctctattgctttgatttatgcgtcactacctaaatttctttgtataatttagttgtcc 8645450  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    || |  ||||||||||||||||||||||||||||||||||||    
T  8645451 aaaaggttgtcacaagaaatggttgttcaaatatcattgctc 8645492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 14910257 - 14910359
Alignment:
Q  39 atctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcatt 138  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |  || ||| ||||||| |||||||||||| | ||    
T  14910257 atctctctattgctttgatttttgtgtcactacctaaatttctttgtataatttagttgtccaaaaggttctcaaaagaaat-gttgttcaaataacgtt 14910355  T
Q  139 gctc 142  Q
    ||||    
T  14910356 gctc 14910359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 143
Target Start/End: Complemental strand, 5739749 - 5739650
Alignment:
Q  44 tctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    |||||||||||||||||||| ||||||||||| ||||||| | ||| ||  ||||||||||| |||||| ||||||||| |||||||||| |||||||||    
T  5739749 tctattgctttgatttttgtgtcactacctaattttctttatttaatttgattgtccaacaagttgtcataagaaatggatgttcaaataacattgctct 5739650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 18065110 - 18064980
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaaca 104  Q
    |||||||||| |||||| ||||| |||||| ||    |||||||||||||||| |||||  ||||||||||||||||||||||||  | |||||||||||    
T  18065110 tctctcatacacacattgttcttctactttctc----tctctattgctttgatatttgtgccactacctaaatttctttgtataatgtggttgtccaaca 18065015  T
Q  105 aattgtcacaagaaatggttgttcaaatatcattg 139  Q
    | ||||||||  |||  |||||||||||| |||||    
T  18065014 agttgtcacataaaaaagttgttcaaataacattg 18064980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 33712367 - 33712505
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||| |||||| ||||| ||||||     ||||||| |||||||||| |||||   |||||||||||||||||||||||  | |||||||    
T  33712367 tttctctctcatacacacattgttcttctacttt----ctctctctgttgctttgatatttgtgcaactacctaaatttctttgtataatgtggttgtcc 33712462  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||| |||| |||  ||| ||||||||||||| |||||||||    
T  33712463 aacaagttgttacataaaaaggttgttcaaataacattgctct 33712505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 11635524 - 11635431
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaata 133  Q
    |||||||||| |||||||||||||  ||||| |||||| ||||||||||| || |||||  || |||||||||||| ||| |||||||||||||    
T  11635524 tctctctattactttgatttttgtgccactatctaaatctctttgtataatttggttgtataagaaattgtcacaataaagggttgttcaaata 11635431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 1286995 - 1287098
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    |||||| ||| ||||||||||||| |||||| |||||||  ||||||||| ||||||||  || || ||||||||| ||| | ||||||||||| |||||    
T  1286995 tctctcgattactttgatttttgtgtcactatctaaattcttttgtataatttagttgtataagaagttgtcacaataaaggattgttcaaataacattg 1287094  T
Q  140 ctct 143  Q
    ||||    
T  1287095 ctct 1287098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 12588406 - 12588297
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctct--attgctttgatttttgtatcactacctaaatttctttgtataagttagttgt 98  Q
    ||||||||||| | ||||||| |||||||||||| ||  |||||||  |||||||||||||||||  |||||| || ||||||||||| |  ||| ||||    
T  12588406 tttctctctcaaattcacattcttcttttactttttctctctctctctattgctttgatttttgtgccactacatatatttctttgtaaattttaattgt 12588307  T
Q  99 ccaacaaatt 108  Q
    |||| |||||    
T  12588306 ccaaaaaatt 12588297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 32316953 - 32316872
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    ||||||| |||||||||||||||  ||||||||||||    |||||||||||||| ||||||| ||| ||||| | ||||||||||    
T  32316953 tttctctttcatactcacattatctttttactttatc----tctctattgctttggtttttgtgtcagtacctcattttctttgta 32316872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 8990993 - 8991087
Alignment:
Q  44 tctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcatt 138  Q
    ||||||| ||||||||||||  |||||| | |||||||||||| |  |||||||||||| |   |||| ||||||| ||||||||||||| ||||    
T  8990993 tctattgttttgatttttgtgccactactttaatttctttgtaaattttagttgtccaagaggctgtctcaagaaagggttgttcaaataacatt 8991087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 9015440 - 9015534
Alignment:
Q  44 tctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcatt 138  Q
    ||||||| ||||||||||||  |||||| | |||||||||||| |  |||||||||||| |   |||| ||||||| ||||||||||||| ||||    
T  9015440 tctattgttttgatttttgtgccactactttaatttctttgtaaattttagttgtccaagaggctgtctcaagaaagggttgttcaaataacatt 9015534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 3772441 - 3772485
Alignment:
Q  44 tctattgctttgatttttgtatcactacctaaatttctttgtata 88  Q
    ||||||| |||||||||||| |||||| |||||||||||||||||    
T  3772441 tctattgatttgatttttgtgtcactatctaaatttctttgtata 3772485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 5080592 - 5080511
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    ||||||| |||||||||||||||| |||||||||     |||||||||||||||  ||||||| ||||||||| | || |||||||    
T  5080592 tttctctttcatactcacattatttttttacttt----ctctctctattgctttagtttttgtgtcactacctcatttcctttgta 5080511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 26595399 - 26595476
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||  |||||||||     |||||||||||||||| ||||||| ||| ||||| | ||||||||||    
T  26595399 tctctcatactcacattatgtttttacttt----ctctctctattgctttggtttttgtgtcaatacctcattttctttgta 26595476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6531207 - 6531150
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||| ||||||||||||  ||| | |||||||||||||||    
T  6531207 tttctctctcatactcacattatt-ttttactttatctctctat-tattgctttgatttt 6531150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1376411 - 1376494
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    ||||||||| |||||||||||||  ||||||||||||  |||||||||| |||| || ||||| ||| ||| ||  ||||||||||    
T  1376411 tttctctcttatactcacattatatttttactttatc--tctctctattacttttatatttgtgtcaatacatatttttctttgta 1376494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 1384159 - 1384242
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    ||||||||| |||||||||||||  ||||||||||||  |||||||||| |||| || ||||| ||| ||| ||  ||||||||||    
T  1384159 tttctctcttatactcacattatatttttactttatc--tctctctattacttttatatttgtgtcaatacatatttttctttgta 1384242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 10375738 - 10375784
Alignment:
Q  42 tctctattgctttgatttttgtatcactacctaaatttctttgtata 88  Q
    ||||||||| |||||||||||| ||| |||||| |||||||||||||    
T  10375738 tctctattgttttgatttttgtgtcaatacctatatttctttgtata 10375784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13143406 - 13143352
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||| | ||||||||||||    |||||||||||||||||||    
T  13143406 tttctctctcatactcacattact-ttttactttatc----tctctattgctttgatttt 13143352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 17182180 - 17182282
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    |||||||||| ||||||||||| |  ||||| ||||||  |||||||||| ||  ||||  || || |||||| || ||| ||||||||||||| |||||    
T  17182180 tctctctattactttgatttttatgccactatctaaatccctttgtataatttgattgtataagaagttgtcataataaagggttgttcaaataacattg 17182279  T
Q  140 ctc 142  Q
    |||    
T  17182280 ctc 17182282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18141325 - 18141271
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||| | ||||||||||||    |||||||||||||||||||    
T  18141325 tttctctctcatactcacattact-ttttactttatc----tctctattgctttgatttt 18141271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 20998135 - 20998089
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||| ||||||||||| ||||| | ||||||||||    
T  20998135 tctctctattgctttggtttttgtatcaatacctcattttctttgta 20998089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 22079588 - 22079509
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttg 84  Q
    ||||||||||| |||||||||||  |||||||||     |||||||||||||||||||||||| ||| ||| | | ||||||||    
T  22079588 tttctctctcacactcacattatgtttttacttt----ctctctctattgctttgatttttgtgtcaatacatcattttctttg 22079509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25127857 - 25127774
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    ||||||||| |||||||||||||  ||||||||| ||  |||||||||||||||| |||  || ||| ||||||  ||||||||||    
T  25127857 tttctctctgatactcacattatgtttttactttctc--tctctctattgctttggtttccgtgtcaatacctacttttctttgta 25127774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 17551403 - 17551345
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||  |||||||||    |||||||||||| |||| |||||||    
T  17551403 tttctctctcatactcacattatgtttttacttt----atctctctattgttttggtttttgt 17551345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25811863 - 25811805
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||  |||||||||     |||||||||||||||| |||||||    
T  25811863 tttctctctcatactcacattatctttttacttt----ctctctctattgctttggtttttgt 25811805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2075475 - 2075440
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  2075475 tttctctctcatactcacattatt-ttttactttatc 2075440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 4820298 - 4820333
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  4820298 tttctctctcatactcacattatt-ttttactttatc 4820333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 5327616 - 5327580
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  5327616 tttctctctcatactcatattatttttttactttatc 5327580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11547553 - 11547518
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  11547553 tttctctctcatactcacattatt-ttttactttatc 11547518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14986769 - 14986733
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  14986769 tttctctctcatactcacactatttttttactttatc 14986733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 34978343 - 34978481
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||||||||||| ||||||||||     |||||||||||||||| |||||||  |||||||||||||||||||||||| ||||||||||    
T  34978343 tttctctctcatactcacattatccttttacttt----ctctctctattgctttgttttttgtgccactacctaaatttctttgtataatttagttgtcc 34978438  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    || |  ||||||||||||||||||||| |||||||||||||||    
T  34978439 aaaaggttgtcacaagaaatggttgttaaaatatcattgctct 34978481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 13152639 - 13152777
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgc-tttgatttttgtatcactacctaaatttctttgtataagttagttgtc 99  Q
    ||||||||||||||||||||||| ||||||||||     |||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||||||    
T  13152639 tttctctctcatactcacattatccttttacttt----ctctctctattgcttttgatttttgtgccactacctaaatttctttgtataatttagttgtc 13152734  T
Q  100 caacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    ||| |  |||||| |||||||||||||||||||||||||||||    
T  13152735 caaaaggttgtcataagaaatggttgttcaaatatcattgctc 13152777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 21103059 - 21103193
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||| ||| ||||| |||||||| ||||||||||||    ||| |||||||||||||||| |  ||||| |||||||||||||||||||||||||||||    
T  21103059 tttctatcttatacttacattatttttttactttatc----tctttattgctttgatttttatgccactatctaaatttctttgtataagttagttgtcc 21103154  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  21103155 aacaagttatcacaagaaatggttgttcaaatatcattg 21103193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 28249590 - 28249460
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaaca 104  Q
    ||||||||| |||||||||| ||||| ||||||    ||||| |||||||||||||||| ||||||| ||||||||||||||||| |||||||||||| |    
T  28249590 tctctcatattcacattattattttattttatc----tctcttttgctttgatttttgtgtcactacttaaatttctttgtataatttagttgtccaaaa 28249495  T
Q  105 aattgtcacaagaaatggttgttcaaatatcattg 139  Q
    | ||||||||||||||||||||||||||| |||||    
T  28249494 agttgtcacaagaaatggttgttcaaataacattg 28249460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 45420085 - 45419945
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||| |||||||||  |||||||||     ||||||||||| ||||||||||||  |||||||||||||||||||||||| ||||||||||    
T  45420085 tttctctctcatattcacattatcattttacttt----ctctctctattgttttgatttttgtgccactacctaaatttctttgtataatttagttgtcc 45419990  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctctat 145  Q
    || |  |||||| ||||||||||||||||||||  ||||||||||    
T  45419989 aaaaggttgtcaaaagaaatggttgttcaaataatattgctctat 45419945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 29723951 - 29723812
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||||||||| ||  || || ||| ||  ||||||||||||||||||||||||| ||||| ||||||||||||||| || || |||||||    
T  29723951 tttctctctcatactcacatgatcattctattttctc--tctctctattgctttgatttttgtaccactatctaaatttctttgtaaaatttggttgtcc 29723854  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    ||||| ||||||||| |||||||||| |||||| ||||||||    
T  29723853 aacaagttgtcacaataaatggttgtacaaataacattgctc 29723812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 33845126 - 33845227
Alignment:
Q  42 tctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgct 141  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||  | ||||||||||||||||||||| |||| ||||||||||||| |||||||    
T  33845126 tctctgttgctttgatttttgtgtcactacctaaatttctttgtataatgtggttgtccaacaaattgtcacatgaaaaggttgttcaaataacattgct 33845225  T
Q  142 ct 143  Q
    ||    
T  33845226 ct 33845227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 142
Target Start/End: Complemental strand, 2008821 - 2008719
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||||  | |||||||||||| ||||||||  ||||||||||||||||| |||||    
T  2008821 tctctctattgctttgatatttgtgccactacctaaatttctttgtataatgtggttgtccaacaagttgtcacataaaatggttgttcaaataacattg 2008722  T
Q  140 ctc 142  Q
    |||    
T  2008721 ctc 2008719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 12007210 - 12007071
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||||||||| ||  || |||||| ||    ||||||||||||||||||||||  ||||| ||||||||||||||| || || |||||||    
T  12007210 tttctctctcatactcacatgatcattctactttctc----tctctattgctttgatttttgtgccactatctaaatttctttgtaaaatttggttgtcc 12007115  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctcta 144  Q
    ||||| ||||||||| |||| ||||| |||||| ||||||||||    
T  12007114 aacaagttgtcacaataaatagttgtacaaataacattgctcta 12007071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 142
Target Start/End: Original strand, 37352192 - 37352294
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    |||||||| || |||||||||||| ||||||||||||||| ||||||||| || |||||||||||| |||  |||||||||||||||||||||| |||||    
T  37352192 tctctctactgttttgatttttgtgtcactacctaaatttatttgtataatttggttgtccaacaagttggtacaagaaatggttgttcaaataacattg 37352291  T
Q  140 ctc 142  Q
    |||    
T  37352292 ctc 37352294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 26749051 - 26749189
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||||||| ||||| || |||||| |     ||||||||||||||||| ||||  ||  |||||||| ||||||||||| ||||||||||    
T  26749051 tttctctctcatactcactttatttttatactttctt----tctctattgctttgattgttgtgccataacctaaatctctttgtataatttagttgtcc 26749146  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    || | |||||||||| ||||||||||||||||| |||||||||    
T  26749147 aaaagattgtcacaaaaaatggttgttcaaataacattgctct 26749189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 43807833 - 43807700
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaaca 104  Q
    ||||||||||||||||| |||||||||||| ||    | ||||||  |||||||||||| ||||||| ||||| ||||||||||| || ||||| |||||    
T  43807833 tctctcatactcacattgttcttttactttctc----tttctattaatttgatttttgtgtcactacttaaatgtctttgtataatttggttgtacaaca 43807738  T
Q  105 aattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    |||||||| |||||| ||||||||||||| || |||||    
T  43807737 aattgtcataagaaagggttgttcaaataacactgctc 43807700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 32777731 - 32777594
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||||||| | | ||| ||||||     |||||| ||| |||||||||||||  |||||||||||||||||||||||| || |||||||    
T  32777731 tttctctctcatactcacactgtccttctacttt----ctctctccattactttgatttttgtgccactacctaaatttctttgtataatttggttgtcc 32777636  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    ||||| || | |||||||| | ||||||||||| ||||||||    
T  32777635 aacaagttattacaagaaaagattgttcaaataacattgctc 32777594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 43081914 - 43081780
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||| |||| |||||| ||||| |||||| ||    ||||||||||||| || ||||| |||||||||||||||||||||||||  | ||||||     
T  43081914 tttctctcttatacacacattgttcttctactttctc----tctctattgctttaatatttgtgtcactacctaaatttctttgtataatgtggttgtct 43081819  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    ||||||||||||||  |||  |||||||||||| |||||    
T  43081818 aacaaattgtcacataaaaatgttgttcaaataacattg 43081780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 15325629 - 15325526
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    ||||||||||| ||| |||||||| |||||| |||||||| |||||||||  | |||||||||||| ||||||||  ||| ||||||||||||| |||||    
T  15325629 tctctctattgtttttatttttgtgtcactatctaaatttttttgtataatgtggttgtccaacaagttgtcacataaaaaggttgttcaaataacattg 15325530  T
Q  140 ctct 143  Q
    ||||    
T  15325529 ctct 15325526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 33057461 - 33057561
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    |||||||||||||||||||||||| | | ||||||||||||||||||| | || |||||| || |  ||||||||||||| | ||||||||||| |||||    
T  33057461 tctctctattgctttgatttttgtgttattacctaaatttctttgtattatttggttgtctaataggttgtcacaagaaaagattgttcaaataacattg 33057560  T
Q  140 c 140  Q
    |    
T  33057561 c 33057561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 27570427 - 27570529
Alignment:
Q  42 tctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgct 141  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||| || || ||||||||| || ||||||||| |||| ||||| || ||| |||||||    
T  27570427 tctctattgctttgatttttgtgccactatcaaaatttctttgtaaaatttggttgtccaataagttgtcacaataaatagttgtacagataacattgct 27570526  T
Q  142 cta 144  Q
    |||    
T  27570527 cta 27570529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 30941432 - 30941504
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacct 73  Q
    |||||||||||||||||||||||  ||||||||| ||  |||||||||||||||||||||||| ||| |||||    
T  30941432 tttctctctcatactcacattatctttttactttctctctctctctattgctttgatttttgtgtcaatacct 30941504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 46880949 - 46881095
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||||| ||| ||||| ||||  |||  |||||||||| |||||||||||    ||||| |||||| || |||||||| || |||||      
T  46880949 tttctctctcatactcatattgttcttctact--atc--tctctctattactttgattttttcgccactatctaaatgtcgttgtataatttggttgtat 46881044  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctctatataata 151  Q
    || ||||||||| || ||| ||||||||||||| |||||||| ||||||||    
T  46881045 aaaaaattgtcataataaagggttgttcaaataacattgctcaatataata 46881095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 47448873 - 47448956
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtata 88  Q
    ||||||||||||||||||||| |  ||||||||| |     |||||||||||||| |||||||  |||||||||||||||||||||||    
T  47448873 tttctctctcatactcacattgtgtttttactttctt----tctctattgctttggtttttgtgccactacctaaatttctttgtata 47448956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 4292475 - 4292555
Alignment:
Q  2 ttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    ||||||||||||||||||||||  |||||||||     ||||||||||||||||||||||||| || ||  ||| ||||||||||    
T  4292475 ttctctctcatactcacattatgtttttacttt----ctctctctattgctttgatttttgtaccaatatttaattttctttgta 4292555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11564940 - 11564994
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||| |||||||||    ||||||||||||||||||||||    
T  11564940 tttctctctcatactcacattatt-ttttacttt----atctctctattgctttgatttt 11564994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40854679 - 40854621
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||  |||||||||     ||||||||||||||||||||||||    
T  40854679 tttctctctcatactcacattatatttttacttt----ctctctctattgctttgatttttgt 40854621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42584849 - 42584902
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatt 58  Q
    |||||||||||||||||||||||  |||||||||    ||||||||||||||||||||    
T  42584849 tttctctctcatactcacattatatttttacttt----atctctctattgctttgatt 42584902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7817684 - 7817737
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||  |||||||||    ||||||||||||||||||||||    
T  7817684 tttctctctcatactcacattat--ttttacttt----atctctctattgctttgatttt 7817737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 139
Target Start/End: Complemental strand, 49103574 - 49103479
Alignment:
Q  44 tctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    ||||| |||||| ||||||| |||  || || |||||||||||||  || ||||||| |||| ||||| || ||||||||| |||||||| |||||    
T  49103574 tctatagctttggtttttgtgtcaagacatacatttctttgtatattttggttgtcccacaagttgtctcatgaaatggttattcaaataacattg 49103479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10055656 - 10055598
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgta 64  Q
    ||||| |||||||||||||||||| ||||||||||||    |||||||||||||| ||||||||    
T  10055656 tttctttctcatactcacattatt-ttttactttatc----tctctattgctttggtttttgta 10055598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18111636 - 18111581
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||  |||||||||    ||||||||||| ||||||||||    
T  18111636 tttctctctcatactcacattatatttttacttt----atctctctattactttgatttt 18111581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 21559849 - 21559899
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||| ||||||||||||    |||||||||||||||||||    
T  21559849 tctctcatactcacattatt-ttttactttatc----tctctattgctttgatttt 21559899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 34
Target Start/End: Original strand, 17945118 - 17945147
Alignment:
Q  5 tctctcatactcacattattcttttacttt 34  Q
    ||||||||||||||||||||||||||||||    
T  17945118 tctctcatactcacattattcttttacttt 17945147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 19643425 - 19643380
Alignment:
Q  39 atctctctattgctttgatttttgtatcactacctaaatttctttg 84  Q
    ||||||||||||||||||||||||| |||||| |  ||||||||||    
T  19643425 atctctctattgctttgatttttgtgtcactatccgaatttctttg 19643380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 35452597 - 35452544
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgattt 59  Q
    |||||||||||||||||||| ||| ||||||||||||    ||||||||||||||||||    
T  35452597 tttctctctcatactcacataatt-ttttactttatc----tctctattgctttgattt 35452544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43942683 - 43942741
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||  |||||||||     |||||||||||||||| |||||||    
T  43942683 tttctctctcatactcacattatctttttacttt----ctctctctattgctttggtttttgt 43942741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 2300165 - 2300233
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaatt 108  Q
    ||||||||||| ||||| |||||| | | |||||| |||||||| ||||  |||||||||| |||||||    
T  2300165 tctctctattgttttgaattttgtgtgaatacctatatttctttctatattttagttgtcccacaaatt 2300233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 3937146 - 3937110
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||  ||||||||||||    
T  3937146 tttctctctcatactcacattatctttttactttatc 3937110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 9031364 - 9031392
Alignment:
Q  117 aaatggttgttcaaatatcattgctctat 145  Q
    |||||||||||||||||||||||||||||    
T  9031364 aaatggttgttcaaatatcattgctctat 9031392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 27163683 - 27163647
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  27163683 tttctctcttatactcacattatttttttactttatc 27163647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33180734 - 33180699
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  33180734 tttctctctcatactcacattatt-ttttactttatc 33180699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 36352607 - 36352554
Alignment:
Q  3 tctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    ||||||||||||| |||||||  |||||||||    ||||||||||||||||||||||    
T  36352607 tctctctcatacttacattatatttttacttt----atctctctattgctttgatttt 36352554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 38956639 - 38956562
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||  |||||||||     |||||||||||||||| |||||||  |||||||| | || |||||||    
T  38956639 tctctcatactcacattatctttttacttt----ctctctctattgctttgttttttgtgccactacctcatttcctttgta 38956562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39231752 - 39231717
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  39231752 tttctctctcatactcacattatt-ttttactttatc 39231717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 44189335 - 44189270
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcacta 70  Q
    |||||||||||||||||||||||  |||||||||     |||||||||| ||||| ||||||| ||||||    
T  44189335 tttctctctcatactcacattatctttttacttt----ctctctctattactttggtttttgtgtcacta 44189270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 47078275 - 47078240
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  47078275 tttctctctcatactcacattatt-ttttactttatc 47078240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 8e-39; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 41443215 - 41443077
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||||||||||||||||||||||     ||||||||||| ||||||||||||   | ||||||||||||||||||||| ||||||||||    
T  41443215 tttctctctcatactcacattattcttttacttt----ctctctctattgttttgatttttgtgcaaatacctaaatttctttgtataatttagttgtcc 41443120  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    || |  ||||||||||||||| |||||||||||||||||||||    
T  41443119 aaaaggttgtcacaagaaatgattgttcaaatatcattgctct 41443077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 4494261 - 4494123
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||| |||||||||| ||  ||||||||| ||    | |||||||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  4494261 tttctctcttatactcacatcatcattttactttctc----tttctattgctttgatttttgtgtcactacctaaatttctttgtataatttggttgtcc 4494166  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||| |||||| |||||||||||||||||||| |||||||||    
T  4494165 aacaagttgtcataagaaatggttgttcaaataacattgctct 4494123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 34307565 - 34307428
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||| ||||||||||||| ||||| |||||| ||    | |||||||||||| ||||||||||||||||||||||||||||||||| || |||||||    
T  34307565 tttctctttcatactcacattgttcttctactttctc----tttctattgctttggtttttgtatcactacctaaatttctttgtataatttggttgtcc 34307470  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    || || ||||||||||||| | ||||||||||| ||||||||    
T  34307469 aataagttgtcacaagaaaggattgttcaaataacattgctc 34307428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 31104746 - 31104849
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    ||||||||||| |||||||||||| |||||||||||||||||| |||||| ||||||||| |||||||||||||||||||  |||||||||||| |||||    
T  31104746 tctctctattgttttgatttttgtgtcactacctaaatttcttcgtataatttagttgtcaaacaaattgtcacaagaaaaagttgttcaaataacattg 31104845  T
Q  140 ctct 143  Q
    ||||    
T  31104846 ctct 31104849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 34456837 - 34456974
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||||| |||||  |||||||||     ||||||||||||||| ||||||||  || ||||||||||||||||||||| |||||||||     
T  34456837 tttctctctcatactcatattatctttttacttt----ctctctctattgctttaatttttgtgccaatacctaaatttctttgtataatttagttgtct 34456932  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    || | |||||||||||||||  ||||||||||||||||||||    
T  34456933 aaaagattgtcacaagaaataattgttcaaatatcattgctc 34456974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 9692772 - 9692900
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||| |||||||||  |||||||||     |||||||||||||||||||||||| ||||| ||||| ||||||||||||| |||||||||     
T  9692772 tttctctctcatattcacattatcattttacttt----ctctctctattgctttgatttttgtgtcactgcctaactttctttgtataatttagttgtct 9692867  T
Q  101 aacaaattgtcacaagaaatggttgttcaaata 133  Q
    || |  |||||||||||||||||||||||||||    
T  9692868 aaaaggttgtcacaagaaatggttgttcaaata 9692900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 39714026 - 39713927
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    |||||||||||||||||||||||| | |||| ||||| || ||||||||| || ||||||||||||||| |||||| ||||||||||||||||| |||||    
T  39714026 tctctctattgctttgatttttgtgttactatctaaaattttttgtataatttggttgtccaacaaattatcacaaaaaatggttgttcaaataacattg 39713927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 29525945 - 29526049
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    ||||||||||| ||||||||||||  ||||| |||||||| |||||| || || |||||||||||| ||||||||| |||||||||| |||||| |||||    
T  29525945 tctctctattgttttgatttttgtgccactatctaaatttttttgtaaaatttggttgtccaacaagttgtcacaataaatggttgtacaaataacattg 29526044  T
Q  140 ctcta 144  Q
    |||||    
T  29526045 ctcta 29526049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 32145975 - 32145871
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||| || ||| || |||||||| ||||| |   ||||||||||||||||| |||||    
T  32145975 tctctctattgttttgatttttgtgtcactacctaaatttctttgtaaaatttaattatccaacaagttgtccccgtaaatggttgttcaaataacattg 32145876  T
Q  140 ctcta 144  Q
    |||||    
T  32145875 ctcta 32145871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 32362984 - 32363116
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaaca 104  Q
    |||||||||| |||||| ||||||||||||      ||||||||||||||||| ||| |  |||||||||||| |||||||||||  | ||||||||| |    
T  32362984 tctctcatacacacattgttcttttacttt------ctctctattgctttgatatttatgccactacctaaatctctttgtataatgtggttgtccaata 32363077  T
Q  105 aattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    |||||||||| |||| ||||||||||||| |||| ||||    
T  32363078 aattgtcacatgaaaaggttgttcaaataacatttctct 32363116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 39099413 - 39099502
Alignment:
Q  54 tgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||||||| |  ||||||||| ||||  ||||||||||| |||||||||    
T  39099413 tgatttttgtaccactacctaaatttctttgtataatttaattgtccaaaatgttgtcacaaaaaataattgttcaaataacattgctct 39099502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 25188414 - 25188308
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcac-aagaaatggttgttcaaatatcatt 138  Q
    ||||||||||||||||||||| || ||| ||||||||||||||||||| | ||||||||| || |  ||||||| || ||| ||||||||||||| ||||    
T  25188414 tctctctattgctttgattttggtgtcattacctaaatttctttgtattatttagttgtctaataggttgtcacaaaaaaaaggttgttcaaataacatt 25188315  T
Q  139 gctctat 145  Q
    || ||||    
T  25188314 gccctat 25188308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 5114124 - 5114205
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    ||||||||||| |||||||||||  |||||||||     |||||||||||||||||||||||| ||||||||| | ||||||||||    
T  5114124 tttctctctcacactcacattatctttttacttt----ctctctctattgctttgatttttgtgtcactacctcattttctttgta 5114205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42358663 - 42358595
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacct 73  Q
    |||||||||||||||||||||||  |||||||||    ||||||||||||||||||||||||| ||| |||||    
T  42358663 tttctctctcatactcacattatctttttacttt----atctctctattgctttgatttttgtgtcaatacct 42358595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 27168706 - 27168567
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||||| ||||||||| |||||  ||    |||||||| |||||||||||||  |||||  |||||  |||||||||| || |||||      
T  27168706 tttctctctcatactcatattattcttctacttcctc----tctctattactttgatttttgtgccactatttaaatccctttgtataatttggttgtat 27168611  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctcta 144  Q
    || || |||||| || ||| ||||||||||||| ||||| ||||    
T  27168610 aagaagttgtcataataaagggttgttcaaataacattgttcta 27168567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 44813180 - 44813263
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||| ||| ||||| ||  |||||||||||||| | |||||||  |||||||||| || |||||||    
T  44813180 tttctctctcatactcacattattttttaactttctc--tctctctattgcttgggtttttgtgccactacctaatttcctttgta 44813263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 33472443 - 33472305
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||| ||| ||| |||||||||||| |     | |||||| |||||||||||||||||||| |||||| ||||||||||| ||  ||||      
T  33472443 tttctctctcatattcatattgttcttttactttctt----tttctattactttgatttttgtatcactatctaaatctctttgtataatttgattgtat 33472348  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    || || |||||| || ||| ||||||| ||||| |||| ||||    
T  33472347 aagaagttgtcataataaagggttgtttaaataacattactct 33472305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 288772 - 288837
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcacta 70  Q
    |||||||||||||||||||||||| |||||||||     |||||||||||||||| ||||||| ||||||    
T  288772 tttctctctcatactcacattatttttttacttt----ctctctctattgctttggtttttgtgtcacta 288837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 5244275 - 5244356
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||| |||||||||     |||||||||||||||| |||||||  |||||||| | || |||||||    
T  5244275 tttctctctcatactcacattatttttttacttt----ctctctctattgctttggtttttgtgccactacctcatttcctttgta 5244356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 38671664 - 38671797
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||| |||||||||| ||||| ||||||||     |||||||| |||| ||||||||||||||| ||||||  |||| ||||| ||| ||||      
T  38671664 tttctctctcgtactcacattgttcttatactttatt----tctctattactttaatttttgtatcactatctaaatcactttatataatttaattgtat 38671759  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcatt 138  Q
    |  || || | |||| ||||||||||||||||| ||||    
T  38671760 aggaagttattacaataaatggttgttcaaataacatt 38671797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 38926674 - 38926755
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||  |||||||||     |||||||||||||||| ||||||| ||||||||| | || |||||||    
T  38926674 tttctctctcatactcacattatctttttacttt----ctctctctattgctttggtttttgtgtcactaccttatttcctttgta 38926755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41505537 - 41505618
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||  |||||||||     |||||||||||||||| ||||||| ||||||||| | || |||||||    
T  41505537 tttctctctcatactcacattatctttttacttt----ctctctctattgctttggtttttgtgtcactacctcatttcctttgta 41505618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 33939282 - 33939350
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactac 71  Q
    ||||||||||||| |||||||||  ||||||||| ||  |||||||||||||||| ||||||| |||||||    
T  33939282 tttctctctcatattcacattatctttttactttctc--tctctctattgctttggtttttgtgtcactac 33939350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35597208 - 35597276
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacct 73  Q
    |||||||||||||||||||||||| |||||||||     ||||||||||| |||| ||||||| |||||||||    
T  35597208 tttctctctcatactcacattatttttttacttt----ctctctctattgttttggtttttgtgtcactacct 35597276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 6178450 - 6178383
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacc 72  Q
    |||||||||||||||||||||||  |||||||||     |||||||||||||||||||||||| ||| ||||    
T  6178450 tttctctctcatactcacattatgtttttacttt----ctctctctattgctttgatttttgtgtcaatacc 6178383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 41309198 - 41309244
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||    
T  41309198 tctctctattgctttgatttttgtgtcactacctcattttctttgta 41309244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 34064126 - 34064024
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaaca 104  Q
    |||||||||||||||||||| || |||||| |     |||||||| ||||||||||| ||||||||||||| ||| | ||||||| ||  ||||| ||||    
T  34064126 tctctcatactcacattatttttctactttctt----tctctattactttgatttttatatcactacctaagtttatctgtataatttgtttgtctaaca 34064031  T
Q  105 aattgtc 111  Q
    | |||||    
T  34064030 agttgtc 34064024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 49761354 - 49761411
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||| |||||||||    ||||||||||||||||| |||||||    
T  49761354 tttctctctcatactcacattatt-ttttacttt----atctctctattgctttggtttttgt 49761411  T

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Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 8502880 - 8502832
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtata 88  Q
    |||||||||||||||||||||| | ||| ||| ||||||||||||||||    
T  8502880 tctctctattgctttgatttttatctcaatacataaatttctttgtata 8502832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 20221613 - 20221569
Alignment:
Q  44 tctattgctttgatttttgtatcactacctaaatttctttgtata 88  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||    
T  20221613 tctaatgctttgatttttgtatcaatacctacatttctttgtata 20221569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20548015 - 20547934
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||| ||||  |||||||||     ||||||||||||||||||||||||  |||||||| | || |||||||    
T  20548015 tttctctctcatactcacgttatctttttacttt----ctctctctattgctttgatttttgtgccactacctcatttcctttgta 20547934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 27089960 - 27089869
Alignment:
Q  42 tctctattgctttgatttttgtatcactacctaaatttctttgtataagttag-ttgtccaacaaattgtcacaagaaatggttgttcaaata 133  Q
    |||||||||||||| ||||||||||| |||  | |||||||||||| | |||| |||||| | |||||||||  | |||||||||||||||||    
T  27089960 tctctattgctttggtttttgtatcaatactcatatttctttgtat-atttagattgtcccagaaattgtcaacaaaaatggttgttcaaata 27089869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 27541527 - 27541446
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||  |||||||||     |||||||||||||||| |||||||  |||||||| | || |||||||    
T  27541527 tttctctctcatactcacattatctttttacttt----ctctctctattgctttggtttttgtgccactacctcatttcctttgta 27541446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 55361258 - 55361177
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    ||||||||| |||||||||||||| |||||||||     |||||||||||||||| ||||||| ||| ||| | | ||||||||||    
T  55361258 tttctctcttatactcacattatttttttacttt----ctctctctattgctttggtttttgtgtcaatacttcattttctttgta 55361177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 50314671 - 50314739
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacct 73  Q
    |||||||||||||||||||||||  |||||||||     |||||||||| ||||||||||||| ||| |||||    
T  50314671 tttctctctcatactcacattatgtttttacttt----ctctctctattactttgatttttgtgtcaatacct 50314739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 13348124 - 13348078
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||| ||||||||||| ||||| | ||||||||||    
T  13348124 tctctctattgctttggtttttgtatcaatacctcattttctttgta 13348078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 48353043 - 48353102
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgta 64  Q
    ||||||||||||||||| |||||  |||||||||     |||||||||||||||||||||||||    
T  48353043 tttctctctcatactcatattatatttttacttt----ctctctctattgctttgatttttgta 48353102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 138
Target Start/End: Complemental strand, 54870567 - 54870485
Alignment:
Q  56 atttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcatt 138  Q
    ||||||||||||  ||||| |||||||||||||  || ||||||| ||||||| |   | |||||||||||||||||| ||||    
T  54870567 atttttgtatcaaaacctatatttctttgtatattttggttgtcctacaaattatatgatgaaatggttgttcaaataacatt 54870485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 8847156 - 8847189
Alignment:
Q  1 tttctctctcatactcacattattcttttacttt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  8847156 tttctctctcatactcacattatttttttacttt 8847189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26452747 - 26452693
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgattt 59  Q
    |||||||||||||||||||||||  |||||||||     ||||||||||||||||||||    
T  26452747 tttctctctcatactcacattatatttttacttt----ctctctctattgctttgattt 26452693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 42102395 - 42102428
Alignment:
Q  117 aaatggttgttcaaatatcattgctctatataat 150  Q
    |||||||||||||||||||||||||||| |||||    
T  42102395 aaatggttgttcaaatatcattgctctaaataat 42102428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 48346908 - 48347001
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaata 133  Q
    |||||||||||||||| ||||||| ||| ||   | |||||||||||||  |  ||||||| |||||||||||  | |||| ||||||||||||    
T  48346908 tctctctattgctttggtttttgtgtcaatattcatatttctttgtatatttaggttgtcccacaaattgtcaacaaaaatagttgttcaaata 48347001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 52254163 - 52254053
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataa-gttagttgtc 99  Q
    |||||||||||||||| |||| |  |||||||||     |||||||||||||||| ||||||| ||||||||| | || ||||||| ||  |||||||||    
T  52254163 tttctctctcatactcgcattgtctttttacttt----ctctctctattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgtc 52254068  T
Q  100 caacaaattgtcaca 114  Q
      | |||||||||||    
T  52254067 acaaaaattgtcaca 52254053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 52714780 - 52714838
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    ||||||||||||||| |||||||  |||||||||     ||||||||||||||||||||||||    
T  52714780 tttctctctcatacttacattatatttttacttt----ctctctctattgctttgatttttgt 52714838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8821677 - 8821712
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8821677 tttctctctcatactcacattatt-ttttactttatc 8821712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8846538 - 8846573
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8846538 tttctctctcatactcacattatt-ttttactttatc 8846573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9719477 - 9719420
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||| ||||||||||||||||||   |||||||| ||  |||||||||||||||||||||    
T  9719477 tttccctctcatactcacattatgtctttactttctc--tctctctattgctttgatttt 9719420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 26996363 - 26996398
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  26996363 tttctctctcatactcacattatt-ttttactttatc 26996398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 32767723 - 32767758
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  32767723 tttctctctcatactcacattatt-ttttactttatc 32767758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 33375907 - 33375942
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  33375907 tttctctctcatactcacattatt-ttttactttatc 33375942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 36869750 - 36869722
Alignment:
Q  117 aaatggttgttcaaatatcattgctctat 145  Q
    |||||||||||||||||||||||||||||    
T  36869750 aaatggttgttcaaatatcattgctctat 36869722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44677508 - 44677473
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  44677508 tttctctctcatactcacattatt-ttttactttatc 44677473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 44813470 - 44813417
Alignment:
Q  3 tctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||  |||||||||    ||||||||||||||||| ||||    
T  44813470 tctctctcatactcacattatatttttacttt----atctctctattgctttggtttt 44813417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 53681184 - 53681236
Alignment:
Q  91 ttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    |||||||||||| |  ||||||||| ||||||||||||| ||| |||||||||    
T  53681184 ttagttgtccaaaaggttgtcacaaaaaatggttgttcatataacattgctct 53681236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 54773778 - 54773742
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  54773778 tttctctctcatactcatattatttttttactttatc 54773742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 143
Target Start/End: Complemental strand, 25987807 - 25987673
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaaca 104  Q
    |||||||||||||||||||  || |||||||||    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||| |    
T  25987807 tctctcatactcacattatcattctactttatc----tctctattgctttgatttttgtgtcactacctaaatttctttgtataatttagttgttcaaaa 25987712  T
Q  105 aattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
      ||||||||||||||||||||||||||| |||| ||||    
T  25987711 ggttgtcacaagaaatggttgttcaaataacattactct 25987673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 44061764 - 44061905
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||||||||||||  ||||||||| ||    | ||| |||||||||||||||| |||||| |||||||||||||||||| || |||||||    
T  44061764 tttctctctcatactcacattatcattttactttctc----tttctgttgctttgatttttgtgtcactatctaaatttctttgtataatttggttgtcc 44061859  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctctata 146  Q
    |||||||| ||||||||||| |||||||||||| |||| |||||||    
T  44061860 aacaaattatcacaagaaatagttgttcaaataacattactctata 44061905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 44090933 - 44091070
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||| |||||| ||||| ||||||     |||||||||||||||||||||||| |||||||||||||||||||||||||  | |||||||    
T  44090933 tttctctctcatacacacattgttcttctacttt----ctctctctattgctttgatttttgtgtcactacctaaatttctttgtataatgtggttgtcc 44091028  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    || || |||||||| |||| ||||||||||||| ||||||||    
T  44091029 aaaaagttgtcacatgaaaaggttgttcaaataacattgctc 44091070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 28772115 - 28772012
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    ||||| ||||| ||||||||||||  |||||||||||||||||||||||| |||||||||||| |  |||||||||||||||||||||||||||||||||    
T  28772115 tctctttattgttttgatttttgtgccactacctaaatttctttgtataatttagttgtccaaaaggttgtcacaagaaatggttgttcaaatatcattg 28772016  T
Q  140 ctct 143  Q
    ||||    
T  28772015 ctct 28772012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 1068653 - 1068792
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||| |||||| ||||| ||||||     |||||||||||||||||| |||||| ||||||||||||||||||||||||  | |||||||    
T  1068653 tttctctctcatacacacattgttcttctacttt----ctctctctattgctttgatatttgtaacactacctaaatttctttgtataatgtggttgtcc 1068748  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctcta 144  Q
    ||||| ||||||||  ||| ||||||||||||| ||||||||||    
T  1068749 aacaagttgtcacataaaaaggttgttcaaataacattgctcta 1068792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 26026943 - 26027081
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||| |||||||||||||||||  ||||| ||| ||    | ||||||||||| ||||||||||||||| |||||||||||||||||| || |||| ||    
T  26026943 tttctttctcatactcacattatcattttattttctc----tttctattgctttaatttttgtatcactatctaaatttctttgtataatttggttggcc 26027038  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||| |||||||||||||| | |||||||||| |||||||||    
T  26027039 aacaagttgtcacaagaaatagctgttcaaataacattgctct 26027081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 9630207 - 9630307
Alignment:
Q  42 tctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgct 141  Q
    |||||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||| |||||| ||||| |||||||    
T  9630207 tctctatttctttgatttttatatcactacctaaatttctttatataatttagttgtctaacaaattgtcacaaaaaatagttgtttaaataacattgct 9630306  T
Q  142 c 142  Q
    |    
T  9630307 c 9630307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 33451587 - 33451448
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||||||||| | ||| |||||| ||    ||||||||||||||||||||||  |||||||||| ||||||||||||| ||  |||||     
T  33451587 tttctctctcatactcacattgt-cttctactttctc----tctctattgctttgatttttgtgccactacctaa-tttctttgtataatttgattgtct 33451494  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctctata 146  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  33451493 aacaagttgtcacaagaaagggttgttcaaataacattgctctata 33451448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 15716965 - 15716862
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||  | |||||||||||| ||||||||  |||  |||||||||||| |||||    
T  15716965 tctctctattgctttgatatttgtatcactacctaaatttctttgtataatgtggttgtccaacaagttgtcacataaaaaagttgttcaaataacattg 15716866  T
Q  140 ctct 143  Q
    ||||    
T  15716865 ctct 15716862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 34435761 - 34435624
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||| |||||| ||||| ||||||  ||  ||||||||||||||||| |||||  ||||||||||||||||||||||||  | ||||| |    
T  34435761 tttctctctcatacacacattgttcttctacttt--cg--ctctctattgctttgatatttgtgccactacctaaatttctttgtataatgtggttgtgc 34435666  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    ||||| ||||||||  ||| ||||||||||||| ||||||||    
T  34435665 aacaagttgtcacataaaaaggttgttcaaataacattgctc 34435624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 33107891 - 33107753
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||| ||||||| |||||| ||||| |||||| ||    ||||| |||||||||| |||||   |||||||||||||||||||||||  | |||||||    
T  33107891 tttctccctcatacacacattgttcttctactttctc----tctctgttgctttgatatttgtgcaactacctaaatttctttgtataatgtggttgtcc 33107796  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||||||||||||  ||| ||||||||||||| |||||||||    
T  33107795 aacaaattgtcacataaaaaggttgttcaaataacattgctct 33107753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 12241153 - 12241257
Alignment:
Q  39 atctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcatt 138  Q
    ||||||||||||||||||||||| | |||||| ||||||||||||||||||  | ||||||||||||||| |||||  |||  |||||||||||| ||||    
T  12241153 atctctctattgctttgatttttatgtcactatctaaatttctttgtataatgtggttgtccaacaaattatcacataaaaaagttgttcaaataacatt 12241252  T
Q  139 gctct 143  Q
    |||||    
T  12241253 gctct 12241257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 2730985 - 2730849
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||| |||||||||  |||||||||     |||||| | |||||||||||||||  ||||| |||||||| ||||||||| |||||| | |    
T  2730985 tttctctctcatattcacattatctttttacttt----ctctctcaactgctttgatttttgtgccactatctaaatttatttgtataatttagttattc 2730890  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgct 141  Q
    || |  |||||||||||||| ||||||||||||||||||||    
T  2730889 aaaaggttgtcacaagaaattgttgttcaaatatcattgct 2730849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 142
Target Start/End: Original strand, 37172153 - 37172244
Alignment:
Q  51 ctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    ||||||||||||| ||| ||||||||||||||||||||| || ||||||||||||||||| ||||||||   ||||||||||| ||||||||    
T  37172153 ctttgatttttgtgtcattacctaaatttctttgtataatttggttgtccaacaaattgttacaagaaaaaattgttcaaataacattgctc 37172244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 44825493 - 44825603
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaaca 104  Q
    ||||||||||||||||||||  | |||||| ||    ||||||||||||||||||||||||   || |||||||||||||||||| ||  ||||| | ||    
T  44825493 tctctcatactcacattatttatctactttctc----tctctattgctttgatttttgtatatttatctaaatttctttgtataatttgattgtcaatca 44825588  T
Q  105 aattgtcacaagaaa 119  Q
    | |||||||||||||    
T  44825589 agttgtcacaagaaa 44825603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 45405973 - 45405880
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaata 133  Q
    ||||||||||| |||||||||||| | | ||  ||||||| ||||||||| || |||||||||||| || ||| ||||||||||| ||||||||    
T  45405973 tctctctattgttttgatttttgtgttattatataaatttatttgtataatttggttgtccaacaagttctcataagaaatggttattcaaata 45405880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 5601007 - 5600911
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaaca 104  Q
    |||||||||||||||| ||| || ||||||     ||||| |||||||||||||||||| |||| | ||||||||||||||| || || |||||||||||    
T  5601007 tctctcatactcacatgattattctacttt----ctctctttattgctttgatttttgtgtcaccatctaaatttctttgtaaaatttggttgtccaaca 5600912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 5639613 - 5639709
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaaca 104  Q
    |||||||||||||||| ||| || ||||||     ||||| |||||||||||||||||| |||| | ||||||||||||||| || || |||||||||||    
T  5639613 tctctcatactcacatgattattctacttt----ctctctttattgctttgatttttgtgtcaccatctaaatttctttgtaaaatttggttgtccaaca 5639708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34718162 - 34718220
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgta 64  Q
    |||||||||||||||||||||||| ||||||||||||    |||||||||||||||||||||||    
T  34718162 tttctctctcatactcacattatt-ttttactttatc----tctctattgctttgatttttgta 34718220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 145
Target Start/End: Original strand, 9629649 - 9629750
Alignment:
Q  44 tctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||||| ||||||||||||   | || | |||||||||||||||| || |||||||||||| ||||||  |||||  |||||||||||| ||||| |||    
T  9629649 tctattgttttgatttttgtgcaattatccaaatttctttgtataatttggttgtccaacaagttgtcatgagaaaaagttgttcaaataacattgttct 9629748  T
Q  144 at 145  Q
    ||    
T  9629749 at 9629750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 17775413 - 17775312
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    |||||||| ||||||| ||||||| |||  | ||| |||||||||||||  |||||||||| |||| |||| |||  |||| |||||||||||| |||||    
T  17775413 tctctctagtgctttggtttttgtgtcaagatctatatttctttgtatattttagttgtcctacaagttgttacataaaatagttgttcaaataacattg 17775314  T
Q  140 ct 141  Q
    ||    
T  17775313 ct 17775312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 36874102 - 36874001
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    ||||||||||  ||||||||||||| ||||| ||||||  |||| ||||| || |||||  || ||||| |||||| ||| ||||||||||||| |||||    
T  36874102 tctctctattattttgatttttgtaccactatctaaatccctttatataatttggttgtataaaaaattatcacaataaagggttgttcaaataacattg 36874003  T
Q  140 ct 141  Q
    ||    
T  36874002 ct 36874001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 32501221 - 32501140
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||| |||||| ||     |||||||||| ||||||||||||| ||||||||| | || |||||||    
T  32501221 tttctctctcatactcacattatttttttacgtt----ctctctctattactttgatttttgtgtcactacctcatttcctttgta 32501140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 41639820 - 41639764
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||  ||||||||| ||  ||||||||||||||||||||||||    
T  41639820 tctctcatactcacattatatttttactttctc--tctctctattgctttgatttttgt 41639764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30439530 - 30439476
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||| |||||||||    ||||||||||||||||||||||    
T  30439530 tttctctctcatactcacattatt-ttttacttt----atctctctattgctttgatttt 30439476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8671580 - 8671518
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatca 67  Q
    |||||||||||||||| ||||||  ||||||||||||    |||||||| |||||||||||||||||    
T  8671580 tttctctctcatactcgcattatatttttactttatc----tctctattactttgatttttgtatca 8671518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9549223 - 9549166
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||| |||||||||    ||||||||||||| |||||||||||    
T  9549223 tttctctctcatactcacattatt-ttttacttt----atctctctattgcattgatttttgt 9549166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 16613685 - 16613738
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||| ||||||||||||    ||||||||||||||||||||||    
T  16613685 tctctcatactcacattatt-ttttactttatc----tctctattgctttgatttttgt 16613738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 136
Target Start/End: Original strand, 4672085 - 4672169
Alignment:
Q  52 tttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatca 136  Q
    ||||||||||||| |||  ||||||||||||||||| | || |||||| || |   ||||||||||||  |||||||||||||||    
T  4672085 tttgatttttgtaccaccgcctaaatttctttgtattatttggttgtctaatagggtgtcacaagaaaaagttgttcaaatatca 4672169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 31249545 - 31249468
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||  |||||||||     |||||||||||||||| |||||||| |||||||| | || |||||||    
T  31249545 tctctcatactcacattatctttttacttt----ctctctctattgctttggtttttgtaccactacctcatttcctttgta 31249468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 5277728 - 5277674
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||| ||||| |||    ||||||||||||||||||||||    
T  5277728 tttctctctcatactcacattatt-ttttatttt----atctctctattgctttgatttt 5277674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41159913 - 41159859
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||| |||||||||    ||||||||||||||||| ||||    
T  41159913 tttctctctcatactcacattatt-ttttacttt----atctctctattgctttggtttt 41159859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6991832 - 6991775
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||| |||||||||    |||||||| |||||||| |||||||    
T  6991832 tttctctctcatactcacattatt-ttttacttt----atctctcttttgctttggtttttgt 6991775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10902751 - 10902809
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    ||||||||||| |||||||||||  |||||||||     ||||||||||||||||||||||||    
T  10902751 tttctctctcacactcacattatgtttttacttt----ctctctctattgctttgatttttgt 10902809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29028985 - 29028928
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    ||||||||| |||||||||||||| ||||| ||||||    ||||||||||||||||||||||    
T  29028985 tttctctcttatactcacattatt-ttttaatttatc----tctctattgctttgatttttgt 29028928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35067207 - 35067265
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||||||  |||||||||     |||||||||||||||| |||||||    
T  35067207 tttctctctcatactcacattatatttttacttt----ctctctctattgctttggtttttgt 35067265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36885511 - 36885444
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactaccta 74  Q
    |||||||||||||||||||||||  |||||||||    |||||| ||||||||||||||| || ||| ||||||    
T  36885511 tttctctctcatactcacattat--ttttacttt----atctctttattgctttgattttcgtgtcaataccta 36885444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 43397827 - 43397860
Alignment:
Q  1 tttctctctcatactcacattattcttttacttt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  43397827 tttctctctcatactcacattatttttttacttt 43397860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1633914 - 1633879
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  1633914 tttctctctcatactcacattatt-ttttactttatc 1633879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6968257 - 6968221
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||| | ||||||||||||    
T  6968257 tttctctctcatactcacattacttttttactttatc 6968221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 11017852 - 11017887
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  11017852 tttctctctcatactcacattatt-ttttactttatc 11017887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 11253567 - 11253486
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    ||||||||||||||| |||||||  ||||| |||     |||||||||||||||| ||||||| ||| ||||| | ||||||||||    
T  11253567 tttctctctcatacttacattatctttttatttt----ctctctctattgctttggtttttgtgtcaatacctcattttctttgta 11253486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 12898950 - 12898897
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttg 62  Q
    |||||||||||||||||||  |||||||||    ||||||||||||||||| ||||||    
T  12898950 tctctcatactcacattatctttttacttt----atctctctattgctttggtttttg 12898897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 15794991 - 15794935
Alignment:
Q  77 tttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaata 133  Q
    ||||||||||||  |||||||||| |||| ||||| ||  |||||||||||||||||    
T  15794991 tttctttgtatattttagttgtcctacaagttgtctcataaaatggttgttcaaata 15794935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 22719486 - 22719567
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||| ||||||||||  |||||||||     |||||||||||||||| |||||||   ||||||| | ||||||||||    
T  22719486 tttctctctcatgctcacattatctttttacttt----ctctctctattgctttggtttttgtgcaactacctcattttctttgta 22719567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 27325804 - 27325885
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||| ||  |||||||||     |||||||||||||||| |||||||  |||||||| | || |||||||    
T  27325804 tttctctctcatactcacatgatctttttacttt----ctctctctattgctttggtttttgtgccactacctcatttcctttgta 27325885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28646718 - 28646754
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  28646718 tttctctctcatactcacataatttttttactttatc 28646754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28651302 - 28651338
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  28651302 tttctctctcatactcacataatttttttactttatc 28651338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 32020490 - 32020433
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||| ||||||  ||||||||| ||  |||| ||||||||||||||||    
T  32020490 tttctctctcatactcgcattatgtttttactttctc--tctcgctattgctttgatttt 32020433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33589254 - 33589219
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  33589254 tttctctctcatactcacattatt-ttttactttatc 33589219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 156
Target Start/End: Complemental strand, 36524665 - 36524625
Alignment:
Q  117 aaatggttgttcaaatatcattgct-ctatataatatcact 156  Q
    ||||||||||||||||||||||||| ||||||| |||||||    
T  36524665 aaatggttgttcaaatatcattgctcctatatattatcact 36524625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 36816640 - 36816583
Alignment:
Q  2 ttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||| |||||||||||||||  |||||||||     ||||||||||||||||||||||||    
T  36816640 ttctctatcatactcacattatctttttacttt----ttctctctattgctttgatttttgt 36816583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 41521015 - 41521050
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  41521015 tttctctctcatactcacattatt-ttttactttatc 41521050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 45529270 - 45529235
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  45529270 tttctctctcatactcacattatt-ttttactttatc 45529235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 8977 - 8840
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||| |||||| ||||| ||||||     |||||||||||||||||||||||| |||||||||||||||||||||||||  | |||||||    
T  8977 tttctctctcatacacacattgttcttctacttt----ctctctctattgctttgatttttgtgtcactacctaaatttctttgtataatgtggttgtcc 8882  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    || || |||||||| |||| ||||||||||||| ||||||||    
T  8881 aaaaagttgtcacatgaaaaggttgttcaaataacattgctc 8840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 13089806 - 13089672
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||| |||||||||||||||  || |||||||||    |||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||| |    
T  13089806 tttctctttcatactcacattatcattctactttatc----tctctattgctttgatttttgtgtcactacctaaatttctttgtataatttaattgttc 13089711  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    || |  |||||| |||||||||||||||||||| |||||    
T  13089710 aaaaggttgtcataagaaatggttgttcaaataacattg 13089672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 44 - 143
Target Start/End: Complemental strand, 17097787 - 17097689
Alignment:
Q  44 tctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||| ||||    
T  17097787 tctattactttgatttttgtgtcactacctaattttctttgtataatttagttgtccaacaaattgtcacaagaaatgg-tgttcaaataacattactct 17097689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 39195826 - 39195927
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||  |||   ||||||||||| |||||    
T  39195826 tctctctattgctttgatttttgtatcactacctaaatttctttgtataatgtggttgtccaacaaattgtcacataaaaaaattgttcaaataacattg 39195925  T
Q  140 ct 141  Q
    ||    
T  39195926 ct 39195927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 21210865 - 21211001
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||| |||||||||||| ||||||     ||||||||||||||| |||||||||  |||||||||||||||||||||||  | ||||| |    
T  21210865 tttctctctcatacacacattattcttctacttt----ctctctctattgctttaatttttgtactactacctaaatttctttgtataatgtggttgttc 21210960  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgct 141  Q
    || || ||||||||  ||| ||||||||||||| |||||||    
T  21210961 aataagttgtcacataaaaaggttgttcaaataacattgct 21211001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 145
Target Start/End: Complemental strand, 32872883 - 32872782
Alignment:
Q  44 tctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    ||||||||||||| |||||| | ||||||||||||||||| ||||  ||  ||||||||||| ||||||||||||| ||||||||||||| |||||||||    
T  32872883 tctattgctttgacttttgtgttactacctaaatttctttttatattttgattgtccaacaagttgtcacaagaaagggttgttcaaataacattgctct 32872784  T
Q  144 at 145  Q
    ||    
T  32872783 at 32872782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 611911 - 612048
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||||||||||||  ||||| |||     |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||     
T  611911 tttctctctcatactcacattatcattttatttt----ctctctctactgctttgatttttgtgtcactacctaaatttctttgtataatttagttgtct 612006  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    || |  ||||||| ||||||  || |||| ||| ||||||||    
T  612007 aaaaggttgtcacgagaaattatttttcatataacattgctc 612048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 42446315 - 42446180
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||| |||||||||| | ||| |||||| ||    ||||||||||||||||||||||  || ||||||||||||||||||| | || ||||||     
T  42446315 tttctctctcttactcacattgtccttctactttttc----tctctattgctttgatttttgtgccattacctaaatttctttgtattatttggttgtct 42446220  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgc 140  Q
    || |  |||||||||||||  |||||||||||| ||||||    
T  42446219 aataggttgtcacaagaaaatgttgttcaaataacattgc 42446180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 139
Target Start/End: Complemental strand, 19981971 - 19981876
Alignment:
Q  44 tctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    |||||| |||||||||||||  ||||| |||||||| ||||||||| ||| |||||||||||||||||| ||||||  |||||| ||||| |||||    
T  19981971 tctattactttgatttttgtgccactatctaaatttttttgtataatttaattgtccaacaaattgtcataagaaaatgttgtttaaataacattg 19981876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 11954478 - 11954617
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||||||||| || ||||| ||| |     |||||||| |||||||||||||  ||||| |||| |  |||||||||| ||||||||      
T  11954478 tttctctctcatactcacattgttattttattttctt----tctctattactttgatttttgtgccactatctaagtcactttgtataatttagttgtat 11954573  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctcta 144  Q
    || || |||||| || ||||||||||||||||| ||||||||||    
T  11954574 aagaagttgtcaaaataaatggttgttcaaataacattgctcta 11954617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 12739854 - 12739951
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcatt 138  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||| || ||||||||||||||| ||| || ||||  ||||||||||| ||||    
T  12739854 tctctctattgctttgatttttgtgcttctacctaaatttctttgtataatttggttgtccaacaaattatcataaaaaat-attgttcaaataacatt 12739951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 12802677 - 12802774
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcatt 138  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||| || ||||||||||||||| ||| || ||||  ||||||||||| ||||    
T  12802677 tctctctattgctttgatttttgtgcttctacctaaatttctttgtataatttggttgtccaacaaattatcataaaaaat-attgttcaaataacatt 12802774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 31748422 - 31748520
Alignment:
Q  44 tctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    ||||||||||||||||||||   || |||||||||||||||||||| ||  |||||||| || ||||||||| ||||| ||||||||||| ||| ||||    
T  31748422 tctattgctttgatttttgtgctacaacctaaatttctttgtataatttgattgtccaataagttgtcacaaaaaatgattgttcaaataacatcgctc 31748520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 35075567 - 35075471
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatca 136  Q
    ||||||||||||||||||||||||| || || |||||||| |||||||| | | |||||| || || ||||| ||| ||| ||||||||||||||||    
T  35075567 tctctctattgctttgatttttgtaccaatatctaaatttgtttgtatatgatggttgtctaagaagttgtcccaataaagggttgttcaaatatca 35075471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 138
Target Start/End: Complemental strand, 36563042 - 36562944
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcatt 138  Q
    |||||||||||||| | ||||||| ||| ||||| ||||||||||| ||  || |||||||||||| ||||| ||| ||| ||||||||||||| ||||    
T  36563042 tctctctattgcttaggtttttgtgtcaataccttaatttctttgtgtagtttggttgtccaacaagttgtcccaacaaagggttgttcaaataacatt 36562944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 33037566 - 33037647
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||  |||||||||     |||||||||||||||||||||||| ||||||||| | || |||||||    
T  33037566 tttctctctcatactcacattatctttttacttt----ttctctctattgctttgatttttgtgtcactacctcatttcctttgta 33037647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 32284791 - 32284705
Alignment:
Q  59 tttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctctata 146  Q
    ||||| |||||||||||||||||||| |||  ||||||||||||||| ||||| ||| ||| ||||||| ||||| |||| |||||||    
T  32284791 tttgtgtcactacctaaatttctttggatat-ttagttgtccaacaagttgtctcaacaaaaggttgtttaaataacatttctctata 32284705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 5168233 - 5168310
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||  |||||||||     ||||||||||||||||||||||||  |||||||| | ||||||||||    
T  5168233 tctctcatactcacattatctttttacttt----ctctctctattgctttgatttttgtgccactacctcattttctttgta 5168310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20770178 - 20770246
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactaccta 74  Q
    |||||||||||||||||||||||| |||||||||    |||||||||||||||||||||| || ||| ||||||    
T  20770178 tttctctctcatactcacattatt-ttttacttt----atctctctattgctttgattttcgtgtcaataccta 20770246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35646429 - 35646510
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||||||||| |||||||||     ||||| |||||||||| ||||||| ||||||||| | || |||||||    
T  35646429 tttctctctcatactcacattatttttttacttt----ctctctatattgctttggtttttgtgtcactacctcatttcctttgta 35646510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 16972123 - 16971987
Alignment:
Q  2 ttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcca 101  Q
    |||||||||||| | ||||| ||||| ||||||     |||||||||| ||||||||||||| ||| |  ||||||  |||||||||| ||  ||||  |    
T  16972123 ttctctctcatatttacattgttcttctacttt----ctctctctattactttgatttttgtgtcagtctctaaatccctttgtataatttgattgtata 16972028  T
Q  102 acaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    | || ||||||||| ||||| ||||||||||| ||||||||    
T  16972027 agaagttgtcacaataaatgattgttcaaataacattgctc 16971987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19522028 - 19521960
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacct 73  Q
    ||||||| |||||||||||||||  |||||||||     |||||||||||||||||||||||| |||||||||    
T  19522028 tttctctttcatactcacattatctttttacttt----ctctctctattgctttgatttttgtgtcactacct 19521960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 32478485 - 32478442
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttcttt 83  Q
    |||||||||||||||||||||| | |||||||||||||||||||    
T  32478485 tctctctattgctttgatttttatgtcactacctaaatttcttt 32478442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36738994 - 36739062
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacct 73  Q
    |||||||||||||||||||||||  |||||||||     |||||||||||||||| ||||||| |||||||||    
T  36738994 tttctctctcatactcacattatctttttacttt----ctctctctattgctttggtttttgtgtcactacct 36739062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38493671 - 38493727
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgattttt 61  Q
    |||||||||||||||||||||||  |||||||||    |||||||||||||||||||||||    
T  38493671 tttctctctcatactcacattataattttacttt----atctctctattgctttgattttt 38493727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 29463077 - 29463170
Alignment:
Q  40 tctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaata 133  Q
    ||||||||||||||||||||||||  || |||  | |||||||||||||  |  ||||||| |||| ||||||  | |||||||||||||||||    
T  29463077 tctctctattgctttgatttttgtgccaatactcatatttctttgtatatttaggttgtcccacaagttgtcaacaaaaatggttgttcaaata 29463170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 7287214 - 7287133
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    ||||||| |||||||||||||||  |||||||||     ||||||||||| |||| ||||||| ||||||||| | ||||||||||    
T  7287214 tttctctttcatactcacattatatttttacttt----ctctctctattgttttggtttttgtgtcactacctcattttctttgta 7287133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8097296 - 8097356
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||| |||||||||| |||||| ||||| ||| ||  ||||||||||||||||||||||||    
T  8097296 tttctcactcatactcatattatttttttattttttc--tctctctattgctttgatttttgt 8097356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 152
Target Start/End: Original strand, 38387867 - 38387902
Alignment:
Q  117 aaatggttgttcaaatatcattgctctatataatat 152  Q
    ||||||||||||||||||||||||||||| ||||||    
T  38387867 aaatggttgttcaaatatcattgctctatgtaatat 38387902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41175730 - 41175679
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgat 57  Q
    |||||||||||||||||||||||| |||||||||    |||||||||||||||||||    
T  41175730 tttctctctcatactcacattatt-ttttacttt----atctctctattgctttgat 41175679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 151
Target Start/End: Original strand, 91372 - 91406
Alignment:
Q  117 aaatggttgttcaaatatcattgctctatataata 151  Q
    ||||||||||||||||||||||||||| |||||||    
T  91372 aaatggttgttcaaatatcattgctctttataata 91406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3640221 - 3640167
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||| |||||||||    |||| |||||||||||||||||    
T  3640221 tttctctctcatactcacattatt-ttttacttt----atctttctattgctttgatttt 3640167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 8675457 - 8675403
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||| | ||||||||||||    |||||||||||||||||||    
T  8675457 tttctctctcatactcacattact-ttttactttatc----tctctattgctttgatttt 8675403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 43196649 - 43196595
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    ||||| |||||||||||||||||| ||||||||||||    |||||||||||||||||||    
T  43196649 tttctttctcatactcacattatt-ttttactttatc----tctctattgctttgatttt 43196595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 4719701 - 4719755
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||||||||||  |||||||||     ||||||||||||||||||||||||    
T  4719701 tctctcatactcacattatgtttttacttt----ttctctctattgctttgatttttgt 4719755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7076593 - 7076535
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    ||||||||||||||||| |||||| |||||||||     |||||||||||||||| |||||||    
T  7076593 tttctctctcatactcatattatttttttacttt----ctctctctattgctttggtttttgt 7076535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25871470 - 25871413
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgt 63  Q
    |||||||||||| ||||||||||| ||||||||||||    |||||||| |||||||||||||    
T  25871470 tttctctctcatgctcacattatt-ttttactttatc----tctctattcctttgatttttgt 25871413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1839369 - 1839334
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  1839369 tttctctctcatactcacattatt-ttttactttatc 1839334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8267844 - 8267809
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8267844 tttctctctcatactcacattatt-ttttactttatc 8267809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 15478705 - 15478740
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  15478705 tttctctctcatactcacattatt-ttttactttatc 15478740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 15639542 - 15639570
Alignment:
Q  117 aaatggttgttcaaatatcattgctctat 145  Q
    |||||||||||||||||||||||||||||    
T  15639542 aaatggttgttcaaatatcattgctctat 15639570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 16437589 - 16437553
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| |||||| |||||    
T  16437589 tttctctctcatactcacattatttttttaccttatc 16437553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 18842345 - 18842310
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  18842345 tttctctctcatactcacattatt-ttttactttatc 18842310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 27546116 - 27546193
Alignment:
Q  7 tctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    |||||||||||||||||  |||||||||||  |||||| | |||||||||||||| | ||| || |||  ||||||||||    
T  27546116 tctcatactcacattatatttttactttat--atctctattttgctttgatttttatgtcaatatctatttttctttgta 27546193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 35099029 - 35098994
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  35099029 tttctctctcatactcacattatt-ttttactttatc 35098994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 36581381 - 36581353
Alignment:
Q  117 aaatggttgttcaaatatcattgctctat 145  Q
    |||||||||||||||||||||||||||||    
T  36581381 aaatggttgttcaaatatcattgctctat 36581353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 8519 - 8656
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    ||||||||||||||||||||| | ||| |||||| ||    | |||||||||||||||||||| |||| | |||||||||||| ||||| |||||||||     
T  8519 tttctctctcatactcacattgtccttctactttctc----tttctattgctttgatttttgtgtcaccaactaaatttctttatataatttagttgtct 8614  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    ||||| |||||||||||||| |||||||||||| ||||||||    
T  8615 aacaagttgtcacaagaaatagttgttcaaataacattgctc 8656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 1691 - 1828
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||||| ||||||  |||||||||     ||||| ||||||||||||||||||  ||||| |||||||||||||||||| ||||||||||    
T  1691 tttctctctcatactctcattatcattttacttt----ctctctttattgctttgatttttgtgccactatctaaatttctttgtataatttagttgtcc 1786  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    || |  ||||| ||||||||||||||||| ||| ||||||||    
T  1787 aaaaggttgtcgcaagaaatggttgttcacataacattgctc 1828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 101930 - 101790
Alignment:
Q  1 tttctctctcatactcacattattcttttactt--tatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgt 98  Q
    ||||||||||||||||||||| | ||| || ||  | ||  |||||||||||||||||||||| | ||||||||||||||||||||||||| || |||||    
T  101930 tttctctctcatactcacattgtccttctattttctctctctctctctattgctttgatttttatgtcactacctaaatttctttgtataatttggttgt 101831  T
Q  99 ccaacaaattgtcacaagaaatggttgttcaaatatcattgc 140  Q
     |||||| ||||||||||||| |||||| |||||| ||||||    
T  101830 -caacaagttgtcacaagaaagggttgtgcaaataacattgc 101790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 10983 - 11120
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||||||||||||  ||||||| |      |||||||||||||||||||||||  ||||| |||||||||||||||||| |||||||||     
T  10983 tttctctctcatactcacattatcattttactct------ctctctattgctttgatttttgtgccactaactaaatttctttgtataatttagttgtcg 11076  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattgctcta 144  Q
    || |  || ||| |||||| ||||||||||||| ||||||||||    
T  11077 aaaaggttttcaaaagaaagggttgttcaaataacattgctcta 11120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 13542 - 13444
Alignment:
Q  44 tctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    |||||| ||| ||||||||||||||| ||||||||||||||||||| |||||||||||| || ||||||||| |||  |||||| ||||| ||||||||    
T  13542 tctattacttcgatttttgtatcactgcctaaatttctttgtataatttagttgtccaataagttgtcacaaaaaagagttgtttaaataacattgctc 13444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 59302 - 59400
Alignment:
Q  44 tctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctc 142  Q
    |||||| ||| ||||||||||||||| ||||||||||||||||||| |||||||||||| || ||||||||| |||  |||||| ||||| ||||||||    
T  59302 tctattacttcgatttttgtatcactgcctaaatttctttgtataatttagttgtccaataagttgtcacaaaaaagagttgtttaaataacattgctc 59400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 143
Target Start/End: Complemental strand, 6540 - 6406
Alignment:
Q  5 tctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtccaaca 104  Q
    ||||||||||||||||| ||||| ||||||     |||||||||| ||||||||||||| |||||| ||||||  |||||||||  || |||||  || |    
T  6540 tctctcatactcacattgttcttctacttt----ctctctctattactttgatttttgtgtcactatctaaatccctttgtatagtttggttgtataaga 6445  T
Q  105 aattgtcacaagaaatggttgttcaaatatcattgctct 143  Q
    | |||| |||| ||| ||||||||||||| |||||||||    
T  6444 agttgtaacaataaaaggttgttcaaatagcattgctct 6406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 35569 - 35650
Alignment:
Q  3 tctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgta 86  Q
    ||||||||||||||| |||||  ||||||||| ||  |||||||||||||||| ||||||| ||||||||| | ||||||||||    
T  35569 tctctctcatactcatattatctttttactttctc--tctctctattgctttggtttttgtgtcactacctcattttctttgta 35650  T

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Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 28351 - 28217
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttttgtatcactacctaaatttctttgtataagttagttgtcc 100  Q
    |||||||||||||| |||||| ||||| ||||||     |||||||||| ||||||||||| |  |||||  ||||||||| | |||||  | ||||||     
T  28351 tttctctctcatacacacattgttcttctacttt----ctctctctattactttgatttttatgccactatataaatttctatatataacgtggttgtct 28256  T
Q  101 aacaaattgtcacaagaaatggttgttcaaatatcattg 139  Q
    ||||| |||||| |  |||  ||||||||||||||||||    
T  28255 aacaagttgtcagataaaaaagttgttcaaatatcattg 28217  T

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Target: scaffold0532 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11011 - 11065
Alignment:
Q  1 tttctctctcatactcacattattcttttactttatcgatctctctattgctttgatttt 60  Q
    |||||||||||||||||||||||| |||||||||    |||||||||||| |||||||||    
T  11011 tttctctctcatactcacattatt-ttttacttt----atctctctattgttttgatttt 11065  T

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