View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17649_high_13 (Length: 452)

Name: NF17649_high_13
Description: NF17649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17649_high_13
NF17649_high_13
[»] chr8 (19 HSPs)
chr8 (5-357)||(6875114-6875468)
chr8 (1-141)||(6864313-6864456)
chr8 (362-424)||(10383913-10383975)
chr8 (358-434)||(6875498-6875564)
chr8 (378-427)||(20672775-20672824)
chr8 (358-427)||(42215282-42215351)
chr8 (177-279)||(6864478-6864590)
chr8 (358-430)||(7918422-7918494)
chr8 (371-427)||(11183570-11183626)
chr8 (370-430)||(21653103-21653163)
chr8 (358-416)||(32840961-32841020)
chr8 (372-422)||(43704366-43704416)
chr8 (367-432)||(30918133-30918197)
chr8 (358-422)||(926505-926569)
chr8 (361-413)||(3254264-3254316)
chr8 (367-427)||(11569442-11569502)
chr8 (96-164)||(30389163-30389231)
chr8 (177-221)||(42215101-42215145)
chr8 (177-221)||(42215325-42215369)
[»] chr1 (22 HSPs)
chr1 (358-430)||(31517716-31517788)
chr1 (358-430)||(19389923-19389996)
chr1 (371-428)||(6292517-6292574)
chr1 (360-416)||(4481966-4482022)
chr1 (368-424)||(37593670-37593726)
chr1 (367-426)||(4699600-4699659)
chr1 (367-425)||(11639401-11639459)
chr1 (373-430)||(4622115-4622172)
chr1 (177-226)||(32548650-32548699)
chr1 (374-430)||(46252674-46252730)
chr1 (358-413)||(6262777-6262832)
chr1 (358-425)||(10199384-10199451)
chr1 (359-429)||(2777915-2777985)
chr1 (373-427)||(35080060-35080114)
chr1 (367-428)||(6262044-6262105)
chr1 (367-416)||(7119922-7119971)
chr1 (378-427)||(15361065-15361114)
chr1 (362-427)||(35925715-35925780)
chr1 (358-430)||(37473425-37473498)
chr1 (358-427)||(44422724-44422793)
chr1 (367-430)||(15942732-15942796)
chr1 (69-101)||(17420329-17420361)
[»] chr6 (18 HSPs)
chr6 (177-226)||(2455812-2455861)
chr6 (358-432)||(20368156-20368230)
chr6 (87-155)||(31461745-31461813)
chr6 (361-416)||(1575931-1575986)
chr6 (372-430)||(4420665-4420723)
chr6 (361-403)||(26559218-26559260)
chr6 (367-424)||(28641734-28641791)
chr6 (361-430)||(31624112-31624181)
chr6 (360-416)||(33832251-33832307)
chr6 (177-223)||(4420648-4420694)
chr6 (359-428)||(9912167-9912237)
chr6 (178-219)||(2205610-2205651)
chr6 (358-427)||(7945860-7945929)
chr6 (368-413)||(22743520-22743565)
chr6 (68-113)||(30641860-30641905)
chr6 (367-411)||(696483-696527)
chr6 (362-402)||(769188-769228)
chr6 (358-402)||(10616689-10616733)
[»] chr5 (24 HSPs)
chr5 (367-430)||(8089958-8090021)
chr5 (358-424)||(17258859-17258925)
chr5 (358-430)||(12459977-12460049)
chr5 (360-427)||(10125696-10125763)
chr5 (367-430)||(37611200-37611263)
chr5 (367-430)||(37787930-37787993)
chr5 (360-430)||(17368698-17368768)
chr5 (367-413)||(37794683-37794729)
chr5 (371-427)||(6587096-6587152)
chr5 (367-428)||(11615639-11615697)
chr5 (378-424)||(12521556-12521602)
chr5 (177-219)||(33533558-33533600)
chr5 (361-430)||(7674670-7674739)
chr5 (373-422)||(12467163-12467212)
chr5 (367-424)||(32897485-32897542)
chr5 (358-430)||(39105486-39105559)
chr5 (367-427)||(5531060-5531119)
chr5 (177-221)||(11684421-11684465)
chr5 (367-427)||(14295531-14295591)
chr5 (371-427)||(14331392-14331448)
chr5 (362-402)||(37489062-37489102)
chr5 (367-427)||(37526184-37526244)
chr5 (367-427)||(37588345-37588405)
chr5 (367-427)||(37690621-37690681)
[»] chr3 (24 HSPs)
chr3 (360-430)||(50952355-50952425)
chr3 (358-427)||(21574515-21574584)
chr3 (359-427)||(1816608-1816676)
chr3 (372-427)||(3044249-3044304)
chr3 (360-430)||(30573892-30573962)
chr3 (358-430)||(21367689-21367762)
chr3 (359-430)||(24085314-24085386)
chr3 (376-432)||(25925762-25925818)
chr3 (370-430)||(36139900-36139960)
chr3 (370-424)||(36101596-36101650)
chr3 (177-219)||(37273143-37273185)
chr3 (356-430)||(47513675-47513749)
chr3 (358-430)||(402517-402590)
chr3 (367-416)||(5391915-5391964)
chr3 (381-430)||(40665451-40665500)
chr3 (75-124)||(44237521-44237570)
chr3 (361-402)||(45541621-45541662)
chr3 (361-430)||(47249465-47249534)
chr3 (183-223)||(2825152-2825192)
chr3 (183-219)||(22667413-22667449)
chr3 (183-219)||(22724052-22724088)
chr3 (367-427)||(24281072-24281132)
chr3 (367-411)||(39723385-39723429)
chr3 (88-140)||(49605781-49605833)
[»] chr7 (13 HSPs)
chr7 (359-416)||(30535599-30535656)
chr7 (361-416)||(15740390-15740445)
chr7 (367-430)||(25670571-25670634)
chr7 (367-430)||(21247947-21248011)
chr7 (367-427)||(46082061-46082121)
chr7 (361-412)||(11048067-11048118)
chr7 (360-411)||(19719047-19719098)
chr7 (177-219)||(25596042-25596084)
chr7 (367-428)||(36598341-36598402)
chr7 (372-428)||(7244704-7244760)
chr7 (371-411)||(11047908-11047948)
chr7 (360-416)||(36537944-36538000)
chr7 (367-411)||(43219789-43219833)
[»] chr2 (21 HSPs)
chr2 (358-427)||(15120208-15120277)
chr2 (177-219)||(34652055-34652097)
chr2 (358-430)||(16451140-16451213)
chr2 (361-425)||(1647263-1647327)
chr2 (358-430)||(8017456-8017528)
chr2 (360-400)||(16398449-16398489)
chr2 (367-430)||(35379001-35379064)
chr2 (177-219)||(16867748-16867790)
chr2 (358-428)||(28677635-28677705)
chr2 (372-430)||(34652026-34652084)
chr2 (358-430)||(4606947-4607020)
chr2 (360-413)||(13220472-13220525)
chr2 (369-430)||(14451037-14451098)
chr2 (367-419)||(1494431-1494483)
chr2 (358-398)||(1801722-1801762)
chr2 (362-414)||(2091014-2091066)
chr2 (358-430)||(12313149-12313221)
chr2 (365-393)||(15870283-15870311)
chr2 (360-428)||(24347746-24347814)
chr2 (367-430)||(36043926-36043990)
chr2 (288-324)||(43808473-43808509)
[»] scaffold0608 (1 HSPs)
scaffold0608 (360-416)||(9615-9671)
[»] chr4 (14 HSPs)
chr4 (367-427)||(20936214-20936274)
chr4 (358-413)||(22662223-22662278)
chr4 (371-421)||(30631987-30632037)
chr4 (367-424)||(679746-679803)
chr4 (361-430)||(30066745-30066814)
chr4 (359-430)||(17822841-17822913)
chr4 (358-398)||(22666702-22666742)
chr4 (367-402)||(1965991-1966026)
chr4 (367-430)||(2996595-2996658)
chr4 (359-414)||(25571298-25571353)
chr4 (205-248)||(54462156-54462199)
chr4 (359-425)||(1137739-1137805)
chr4 (177-221)||(28300318-28300362)
chr4 (372-424)||(29263398-29263450)


Alignment Details
Target: chr8 (Bit Score: 299; Significance: 1e-168; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 5 - 357
Target Start/End: Original strand, 6875114 - 6875468
Alignment:
Q  5 caaaacacagacaacaaggtattagatacccatataaacagcatatatggatcactgagtcatttaaggtcctgtttcaattggtttatttgagtttatc 104  Q
    ||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6875114 caaaacacagacaactagatagtagatacccatataaacagcatatatggatcactgagtcatttaaggtcctgtttcaattggtttatttgagtttatc 6875213  T
Q  105 tatttgcataagtacttgtggaagtgtttgaaagagcataggaaaatagctaatggcatgcccatnnnnnnntttcaacttatttccttaagctctccaa 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  6875214 tatttgcataagtacttgtggaagtgtttgaaagagcataggaaaatagctaatggcatgcccataaatttttttcaacttatttccttaagctctccaa 6875313  T
Q  205 gatagcatatgaaaataac--atatgaaaatagtttgtctttattttgtcttttatgttacagaaacagcttaggcataactgcgtatatgatacgcgct 302  Q
    |||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  6875314 gatagcatatgaaaataacttatatgaaaatagtttgactttattttgtcttttatgttatagaaacagcttaggcataactacgtatatgatacgcgct 6875413  T
Q  303 tatgatataagcacttaattaagggactgtttgaattggtttatttaagcttatc 357  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6875414 tatgatataagcacttaattaagggactgtttgaattggtttatttaagcttatc 6875468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 6864313 - 6864456
Alignment:
Q  1 tacgcaaaacacagacaacaaggtattagatacccatataaacagcatatat-ggatcactg--agtcatttaaggtcctgtttcaattggtttatttga 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||  |||||||| |||| ||||||||||||||||||||||    
T  6864313 tacgcaaaacacagacaacaaggtattagatacccatataaacagcattttttggatcactgtgagtcattttaggttctgtttcaattggtttatttga 6864412  T
Q  98 gtttatctatttgcataagtacttgtggaagtgtttgaaagagc 141  Q
    || |||||||||||||||| ||||  | ||||||||| ||||||    
T  6864413 gtctatctatttgcataagcacttaagaaagtgtttggaagagc 6864456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 424
Target Start/End: Complemental strand, 10383975 - 10383913
Alignment:
Q  362 gaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctct 424  Q
    |||| |||||||||| ||||||| || ||||||||||||||| ||||||||| || |||||||    
T  10383975 gaacttatgaaaacagcttatgacattttcataagctgtttacagcttatttccataagctct 10383913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 434
Target Start/End: Original strand, 6875498 - 6875564
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaagaaatt 434  Q
    |||||||||||||||||||  |||||||||||||||          |||||||||||||||||||||||||||||||    
T  6875498 gggagaacatatgaaaacagattatgatatgttcat----------aagcttattttcaaaagctctccaagaaatt 6875564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 427
Target Start/End: Complemental strand, 20672824 - 20672775
Alignment:
Q  378 cttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    ||||||| |||||||||||||||||  |||||||||||| ||||||||||    
T  20672824 cttatgacatgttcataagctgttttcagcttattttcataagctctcca 20672775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 427
Target Start/End: Original strand, 42215282 - 42215351
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    ||||||||  ||||||||| |||||||  ||||||||||||||||  ||||||||| || ||||||||||    
T  42215282 gggagaactaatgaaaacagcttatgacttgttcataagctgttttcagcttatttacataagctctcca 42215351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 6864478 - 6864590
Alignment:
Q  177 tttcaacttatttccttaagctctccaagatagcatatgaaaataacatat---------gaaaatagtttgtctttattttgt-cttttatgttacaga 266  Q
    ||||| |||||||||| ||||||||||| ||||| |||||||| ||| |||         |||||||||||| ||||||||| | ||||||||||| |||    
T  6864478 tttcagcttatttcctcaagctctccaaaatagcttatgaaaacaacttataacttacatgaaaatagtttgactttattttatccttttatgttataga 6864577  T
Q  267 aacagcttaggca 279  Q
    || ||||||||||    
T  6864578 aatagcttaggca 6864590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 430
Target Start/End: Original strand, 7918422 - 7918494
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||| | ||||||||||||||| || |||||||||||||||||  | |||||||  | |||||||||||||    
T  7918422 gggagagcttatgaaaacaacttaagacatgttcataagctgtttccaacttatttcaataagctctccaaga 7918494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 427
Target Start/End: Complemental strand, 11183626 - 11183570
Alignment:
Q  371 aaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||||||||||||||||||  |||||||||||  ||||||||| || ||||||||||    
T  11183626 aaaacaacttatgatatgtctataagctgttttcagcttatttccataagctctcca 11183570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 21653163 - 21653103
Alignment:
Q  370 gaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||| |||||||||| | ||||||||||| |||  |||||||||||| |||||||||||||    
T  21653163 gaaatcaacttatgacacgttcataagctattttcagcttattttcataagctctccaaga 21653103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 416
Target Start/End: Original strand, 32840961 - 32841020
Alignment:
Q  358 gggagaacatatgaaaacaacttatgata-tgttcataagctgtttaaagcttattttca 416  Q
    |||||||| |||||||||||||||||| | |||||||||| |||||  ||||||||||||    
T  32840961 gggagaacttatgaaaacaacttatgacattgttcataagttgttttcagcttattttca 32841020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 422
Target Start/End: Original strand, 43704366 - 43704416
Alignment:
Q  372 aaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagct 422  Q
    ||||||||||||| |||||||||| |||||| |||||||||| || |||||    
T  43704366 aaacaacttatgacatgttcataaactgttttaagcttatttccataagct 43704416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 432
Target Start/End: Complemental strand, 30918197 - 30918133
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaagaaa 432  Q
    |||||||||||||| ||| || |||||||| |||||  ||||||||| || |||||||||||||||    
T  30918197 tatgaaaacaacttgtgacat-ttcataagttgttttcagcttatttccataagctctccaagaaa 30918133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 422
Target Start/End: Complemental strand, 926569 - 926505
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagct 422  Q
    |||||||  ||| |||||||||||||| |||||||||||| ||||  ||||||||| || |||||    
T  926569 gggagaatttatcaaaacaacttatgacatgttcataagccgttttcagcttatttccacaagct 926505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 3254316 - 3254264
Alignment:
Q  361 agaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattt 413  Q
    ||||| || ||||||| ||||||| |||||||||||||||||  |||||||||    
T  3254316 agaacttaagaaaacagcttatgacatgttcataagctgttttcagcttattt 3254264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 11569442 - 11569502
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||| ||||| ||||||| |||| |||||| |||||  ||||||||||||||| |||||||    
T  11569442 tatggaaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctctcca 11569502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 30389231 - 30389163
Alignment:
Q  96 gagtttatctatttgcataagtacttgtggaagtgtttgaaagagcataggaaaatagctaatggcatg 164  Q
    ||||||| ||| | ||||||||||| |||  | ||||||| |||||||| |||||||||||||| ||||    
T  30389231 gagtttaactactggcataagtactcgtgacactgtttgagagagcatatgaaaatagctaatgacatg 30389163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 42215101 - 42215145
Alignment:
Q  177 tttcaacttatttccttaagctctccaagatagcatatgaaaata 221  Q
    ||||| ||||||| | |||||||||||||||||| ||||||||||    
T  42215101 tttcagcttatttacataagctctccaagatagcttatgaaaata 42215145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 42215325 - 42215369
Alignment:
Q  177 tttcaacttatttccttaagctctccaagatagcatatgaaaata 221  Q
    ||||| ||||||| | ||||||||||| |||||||||||||||||    
T  42215325 tttcagcttatttacataagctctccaggatagcatatgaaaata 42215369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 430
Target Start/End: Original strand, 31517716 - 31517788
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||| ||| ||||||||| |||| |||||||||||||||||  |||||||||||| |||||||||||||    
T  31517716 gggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttattttcataagctctccaaga 31517788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 430
Target Start/End: Complemental strand, 19389996 - 19389923
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctg-tttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||| |||||||| ||||||||||||||||||||| || |||  |||||||||||| |||||||||||||    
T  19389996 gggagaacgtatgaaaaaaacttatgatatgttcataagttgttttttagcttattttcacaagctctccaaga 19389923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 428
Target Start/End: Complemental strand, 6292574 - 6292517
Alignment:
Q  371 aaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaa 428  Q
    |||||| ||||||| |||||||||||||||||  |||||||||||| |||||||||||    
T  6292574 aaaacagcttatgacatgttcataagctgttttcagcttattttcataagctctccaa 6292517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 4482022 - 4481966
Alignment:
Q  360 gagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttca 416  Q
    |||||| |||||||||||||||| | |||||||||||||||||  ||||||||||||    
T  4482022 gagaacttatgaaaacaacttattacatgttcataagctgtttttagcttattttca 4481966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 424
Target Start/End: Original strand, 37593670 - 37593726
Alignment:
Q  368 atgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctct 424  Q
    ||||| ||||||||||| |||||||||||||||||  |||||||||||| |||||||    
T  37593670 atgaacacaacttatgacatgttcataagctgttttcagcttattttcataagctct 37593726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 426
Target Start/End: Original strand, 4699600 - 4699659
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcc 426  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||  | |||||||||    
T  4699600 tatgaaaacaacttatgacatgttcataagctgtttttagcttatttctataagctctcc 4699659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 425
Target Start/End: Original strand, 11639401 - 11639459
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctc 425  Q
    |||||||||| ||||||| |||| ||||||||||||  |||||||||||| ||||||||    
T  11639401 tatgaaaacagcttatgacatgtccataagctgtttttagcttattttcataagctctc 11639459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 373 - 430
Target Start/End: Complemental strand, 4622172 - 4622115
Alignment:
Q  373 aacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||| ||||||| |||| ||||||||||||  |||||||||||| |||||||||||||    
T  4622172 aacatcttatgacatgtccataagctgtttttagcttattttcacaagctctccaaga 4622115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 32548650 - 32548699
Alignment:
Q  177 tttcaacttatttccttaagctctccaagatagcatatgaaaataacata 226  Q
    ||||||||||||||| ||||||| |||||||||| |||||||| ||||||    
T  32548650 tttcaacttatttccataagctccccaagatagcttatgaaaacaacata 32548699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 430
Target Start/End: Original strand, 46252674 - 46252730
Alignment:
Q  374 acaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    ||||||||||| ||||||||||| |||||  || ||||||||| |||||||||||||    
T  46252674 acaacttatgacatgttcataagttgttttcaggttattttcataagctctccaaga 46252730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 413
Target Start/End: Complemental strand, 6262832 - 6262777
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattt 413  Q
    |||||| | |||||||| |||||||||||||| |||||| ||||| ||||||||||    
T  6262832 gggagagcttatgaaaataacttatgatatgtccataagttgttttaagcttattt 6262777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 425
Target Start/End: Original strand, 10199384 - 10199451
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctc 425  Q
    ||||||||  ||||||| | ||||||| ||||||||||| |||||  |||||||||||| ||||||||    
T  10199384 gggagaactcatgaaaatagcttatgacatgttcataagttgttttcagcttattttcataagctctc 10199451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 429
Target Start/End: Complemental strand, 2777985 - 2777915
Alignment:
Q  359 ggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaag 429  Q
    ||||||| ||||||| ||||||||||  | ||||||||| ||||  |||||||||||| ||| ||||||||    
T  2777985 ggagaacttatgaaaccaacttatgacgtattcataagccgttttcagcttattttcataagttctccaag 2777915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 35080060 - 35080114
Alignment:
Q  373 aacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||||||||||| |||||||||||||||||  |||||||||  | ||||||||||    
T  35080060 aacaacttatgacatgttcataagctgttttgagcttatttcgacaagctctcca 35080114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 428
Target Start/End: Complemental strand, 6262105 - 6262044
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaa 428  Q
    ||||| |||||||||||| ||||||||||||| |||  | ||||||| || |||||||||||    
T  6262105 tatgagaacaacttatgacatgttcataagctattttcaacttatttccacaagctctccaa 6262044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 7119922 - 7119971
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttca 416  Q
    ||||||||||||||||||||| ||||||||||| ||  ||||||| ||||    
T  7119922 tatgaaaacaacttatgatatcttcataagctgctttcagcttatattca 7119971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 427
Target Start/End: Complemental strand, 15361114 - 15361065
Alignment:
Q  378 cttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||||| |||||||||||| |||||  |||||||||||| ||||||||||    
T  15361114 cttatgctatgttcataagttgttttcagcttattttcataagctctcca 15361065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 35925780 - 35925715
Alignment:
Q  362 gaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||| |||||||||| ||||||| |||||||||||||||||  | ||||||| || || |||||||    
T  35925780 gaacttatgaaaacagcttatgacatgttcataagctgttttcaacttatttccataaactctcca 35925715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 430
Target Start/End: Complemental strand, 37473498 - 37473425
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgtt-cataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||| | |||||||||||||||| || || |||||||| |||  |||||||||||| ||| |||||||||    
T  37473498 gggagaacttttgaaaacaacttatgacatttttcataagctttttccagcttattttcataagttctccaaga 37473425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 427
Target Start/End: Complemental strand, 44422793 - 44422724
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||||| | |||||||| | ||||||| |||| |||||||||  || |||||||||||| ||||||||||    
T  44422793 gggagagcttatgaaaatagcttatgacatgtccataagctgactacagcttattttcataagctctcca 44422724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 430
Target Start/End: Original strand, 15942732 - 15942796
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagc-tgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||||||||||||| |||||||||||| |||||  |||||||||  | ||| |||||||||    
T  15942732 tatgaaaacaacttatgacatgttcataagcatgttttcagcttatttcaataagttctccaaga 15942796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 17420361 - 17420329
Alignment:
Q  69 taaggtcctgtttcaattggtttatttgagttt 101  Q
    ||||| |||||||||||||||||||||||||||    
T  17420361 taagggcctgtttcaattggtttatttgagttt 17420329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 2455861 - 2455812
Alignment:
Q  177 tttcaacttatttccttaagctctccaagatagcatatgaaaataacata 226  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  2455861 tttcaacttatttccataagctctccaagatagcttatgaaaataacata 2455812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 432
Target Start/End: Original strand, 20368156 - 20368230
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagct-gtttaaagcttattttcaaaagctctccaagaaa 432  Q
    |||||||| |||||||||||||||||| ||||||||||||| |||| || |||||||||| ||| |||||||||||    
T  20368156 gggagaacttatgaaaacaacttatgacatgttcataagctagtttcaa-cttattttcataagttctccaagaaa 20368230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 155
Target Start/End: Complemental strand, 31461813 - 31461745
Alignment:
Q  87 ggtttatttgagtttatctatttgcataagtacttgtggaagtgtttgaaagagcataggaaaatagct 155  Q
    |||||||||||| |||||||||||||||||||||||||  | |||| | |||||| || ||||||||||    
T  31461813 ggtttatttgagcttatctatttgcataagtacttgtgagactgttcgcaagagcttacgaaaatagct 31461745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 416
Target Start/End: Complemental strand, 1575986 - 1575931
Alignment:
Q  361 agaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttca 416  Q
    ||||| |||||||||||||||||| |||||||||||||||||  | ||||||||||    
T  1575986 agaacttatgaaaacaacttatgacatgttcataagctgtttttaacttattttca 1575931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 430
Target Start/End: Complemental strand, 4420723 - 4420665
Alignment:
Q  372 aaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||| |||||| |||||||||||||||||  ||||||||| || |||||||||||||    
T  4420723 aaacaaattatgacatgttcataagctgttttcagcttatttccataagctctccaaga 4420665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 403
Target Start/End: Original strand, 26559218 - 26559260
Alignment:
Q  361 agaacatatgaaaacaacttatgatatgttcataagctgttta 403  Q
    ||||| |||||||||||||||||||||||||| ||||||||||    
T  26559218 agaacttatgaaaacaacttatgatatgttcacaagctgttta 26559260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 28641734 - 28641791
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctct 424  Q
    |||||||||| ||||| | |||||||||||||||||  |||||||||||| |||||||    
T  28641734 tatgaaaacagcttataacatgttcataagctgtttttagcttattttcataagctct 28641791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 430
Target Start/End: Complemental strand, 31624181 - 31624112
Alignment:
Q  361 agaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    ||||| |||||||||| ||||||| |||||||||||||||||  | |||||||||| ||  |||||||||    
T  31624181 agaacttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataatttctccaaga 31624112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 33832251 - 33832307
Alignment:
Q  360 gagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttca 416  Q
    |||||| |||||||||||||||||| ||||| ||||| |||||  ||||||||||||    
T  33832251 gagaacttatgaaaacaacttatgacatgtttataagttgtttttagcttattttca 33832307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 4420694 - 4420648
Alignment:
Q  177 tttcaacttatttccttaagctctccaagatagcatatgaaaataac 223  Q
    ||||| ||||||||| |||||||||||||||||| || |||||||||    
T  4420694 tttcagcttatttccataagctctccaagatagcttaggaaaataac 4420648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 428
Target Start/End: Original strand, 9912167 - 9912237
Alignment:
Q  359 ggagaacatatgaaaacaacttatgatat-gttcataagctgtttaaagcttattttcaaaagctctccaa 428  Q
    ||||||| ||||||| || ||||||| || |||||||||||||||  |||||||||||| ||| |||||||    
T  9912167 ggagaacttatgaaaccagcttatgacattgttcataagctgttttgagcttattttcataagttctccaa 9912237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 2205610 - 2205651
Alignment:
Q  178 ttcaacttatttccttaagctctccaagatagcatatgaaaa 219  Q
    |||| ||||||||| |||||||||||||||||| ||||||||    
T  2205610 ttcagcttatttccataagctctccaagatagcttatgaaaa 2205651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 427
Target Start/End: Original strand, 7945860 - 7945929
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||||||  |||||||||||||||||  ||||| || || ||||| |||||||||| || ||||||||||    
T  7945860 gggagaaattatgaaaacaacttatggcatgtttattagttgttttaagcttatttccataagctctcca 7945929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 413
Target Start/End: Complemental strand, 22743565 - 22743520
Alignment:
Q  368 atgaaaacaacttatgatatgttcataagctgtttaaagcttattt 413  Q
    ||||||||||||||| | |||||||||||||||||  |||||||||    
T  22743565 atgaaaacaacttattacatgttcataagctgttttcagcttattt 22743520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 30641905 - 30641860
Alignment:
Q  68 ttaaggtcctgtttcaattggtttatttgagtttatctatttgcat 113  Q
    |||||| ||||||| |||||| |||||||||||||||||| |||||    
T  30641905 ttaagggcctgtttgaattggcttatttgagtttatctatatgcat 30641860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 411
Target Start/End: Complemental strand, 696527 - 696483
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttat 411  Q
    |||||||||| ||||||| |||||||||||||||||  |||||||    
T  696527 tatgaaaacagcttatgacatgttcataagctgtttttagcttat 696483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 402
Target Start/End: Complemental strand, 769228 - 769188
Alignment:
Q  362 gaacatatgaaaacaacttatgatatgttcataagctgttt 402  Q
    |||| |||||||||| ||||||| |||||||||||||||||    
T  769228 gaacttatgaaaacatcttatgacatgttcataagctgttt 769188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 402
Target Start/End: Original strand, 10616689 - 10616733
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgttt 402  Q
    |||||||| ||| |||||| ||||||| |||||||||||||||||    
T  10616689 gggagaacttatcaaaacaccttatgacatgttcataagctgttt 10616733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 430
Target Start/End: Complemental strand, 8090021 - 8089958
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    ||||||||||||||||||||| ||| ||||||||||  |||||||||||| ||||||| |||||    
T  8090021 tatgaaaacaacttatgatatattcctaagctgttttcagcttattttcataagctcttcaaga 8089958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 358 - 424
Target Start/End: Original strand, 17258859 - 17258925
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctct 424  Q
    |||||||| |||||||| | ||||||| |||||||||||||||||  |||||||||||| |||||||    
T  17258859 gggagaacctatgaaaatagcttatgacatgttcataagctgttttcagcttattttcataagctct 17258925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 430
Target Start/End: Original strand, 12459977 - 12460049
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||| |||||||||||||||||| ||||||||| | |||||   ||||||||||| ||||||| |||||    
T  12459977 gggagaacctatgaaaacaacttatgacatgttcatatgttgtttttggcttattttcataagctctgcaaga 12460049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 427
Target Start/End: Original strand, 10125696 - 10125763
Alignment:
Q  360 gagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||||| |||| ||||||||||||| ||||| ||||| |||||  |||||||||||| ||||||||||    
T  10125696 gagaacttatgtaaacaacttatgacatgttgataaggtgttttcagcttattttcataagctctcca 10125763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 430
Target Start/End: Original strand, 37611200 - 37611263
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||||||||| ||| |||||||||||||||||  || |||||| || |||||||||||||    
T  37611200 tatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaaga 37611263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 430
Target Start/End: Original strand, 37787930 - 37787993
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||||||||| ||| |||||||||||||||||  || |||||| || |||||||||||||    
T  37787930 tatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaaga 37787993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 17368768 - 17368698
Alignment:
Q  360 gagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||| |||||||||||||||||| ||||||||| || ||||  ||||||||| || || ||||||||||    
T  17368768 gagaacttatgaaaacaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaaga 17368698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 413
Target Start/End: Original strand, 37794683 - 37794729
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattt 413  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||    
T  37794683 tatgaaaacaacttatgacatgttcataagctgttttgagcttattt 37794729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 427
Target Start/End: Original strand, 6587096 - 6587152
Alignment:
Q  371 aaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||||| ||||||| | |||||||||||||||| |||||||||||| ||| ||||||    
T  6587096 aaaacagcttatgacaggttcataagctgtttacagcttattttcacaagttctcca 6587152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 428
Target Start/End: Original strand, 11615639 - 11615697
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaa 428  Q
    |||||||||||||||||| | |||||| ||||||||   ||||||||||| |||||||||||    
T  11615639 tatgaaaacaacttatgacacgttcattagctgttt---gcttattttcataagctctccaa 11615697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 424
Target Start/End: Complemental strand, 12521602 - 12521556
Alignment:
Q  378 cttatgatatgttcataagctgtttaaagcttattttcaaaagctct 424  Q
    |||||||||||||||||||||||||  ||||||||| || |||||||    
T  12521602 cttatgatatgttcataagctgttttcagcttatttccataagctct 12521556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 33533558 - 33533600
Alignment:
Q  177 tttcaacttatttccttaagctctccaagatagcatatgaaaa 219  Q
    ||||||||||||||| |||||||||||||||||| | ||||||    
T  33533558 tttcaacttatttccataagctctccaagatagcttgtgaaaa 33533600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 430
Target Start/End: Complemental strand, 7674739 - 7674670
Alignment:
Q  361 agaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    ||||| |||| ||||||||||||| ||||| ||||| |||||  |||||||||||| ||  |||||||||    
T  7674739 agaacttatggaaacaacttatgacatgtttataaggtgttttcagcttattttcacaaattctccaaga 7674670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 422
Target Start/End: Complemental strand, 12467212 - 12467163
Alignment:
Q  373 aacaacttatgatatgttcataagctgtttaaagcttattttcaaaagct 422  Q
    |||||||||||| ||||| |||||||||||  |||||||||||| |||||    
T  12467212 aacaacttatgacatgtttataagctgttttcagcttattttcataagct 12467163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 32897542 - 32897485
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctct 424  Q
    |||| |||||||||||||||| ||||||| ||||||   ||||||||||| |||||||    
T  32897542 tatggaaacaacttatgatattttcataacctgttttctgcttattttcataagctct 32897485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 430
Target Start/End: Complemental strand, 39105559 - 39105486
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatat-gttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||  |||||||||| ||||||| || ||||||||||| |||  |||||||||||| ||| |||||||||    
T  39105559 gggagaatttatgaaaacagcttatgacattgttcataagctatttttagcttattttcataagttctccaaga 39105486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 427
Target Start/End: Complemental strand, 5531119 - 5531060
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    ||||||||||||||||||||||| |||||| |||||  | ||||||| || ||||||||||    
T  5531119 tatgaaaacaacttatgatatgtccataagttgttttta-cttatttccagaagctctcca 5531060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 11684465 - 11684421
Alignment:
Q  177 tttcaacttatttccttaagctctccaagatagcatatgaaaata 221  Q
    ||||||||||||||| |||||||||||  ||||| ||||||||||    
T  11684465 tttcaacttatttccgtaagctctccagcatagcttatgaaaata 11684421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 427
Target Start/End: Complemental strand, 14295591 - 14295531
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||||||||| ||||||||||||  |||||||||||  |||||| ||  ||||||||||||    
T  14295591 tatgaaaacagcttatgatatgtcgataagctgttttcagcttacttctaaaagctctcca 14295531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 427
Target Start/End: Complemental strand, 14331448 - 14331392
Alignment:
Q  371 aaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||||| ||||||| |||| ||||||||| ||  |||||||||||| ||||||||||    
T  14331448 aaaacagcttatgacatgtccataagctgatttcagcttattttcataagctctcca 14331392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 402
Target Start/End: Original strand, 37489062 - 37489102
Alignment:
Q  362 gaacatatgaaaacaacttatgatatgttcataagctgttt 402  Q
    |||| |||||||||||||||||| ||||| |||||||||||    
T  37489062 gaacttatgaaaacaacttatgacatgttgataagctgttt 37489102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 37526184 - 37526244
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||||| ||||| ||||| ||||| |||||||||||  ||||||||| || ||||||||||    
T  37526184 tatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctcca 37526244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 37588345 - 37588405
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||||| ||||| ||||| ||||| |||||||||||  ||||||||| || ||||||||||    
T  37588345 tatgaatacaacctatgaaatgttaataagctgttttcagcttatttccataagctctcca 37588405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 37690621 - 37690681
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||||| ||||| ||||| ||||| |||||||||||  ||||||||| || ||||||||||    
T  37690621 tatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctcca 37690681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 50952425 - 50952355
Alignment:
Q  360 gagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||| || ||||||| ||||||| |||||||||| |||||| |||||||||| || |||||||||||||    
T  50952425 gagaacgtacgaaaacagcttatgacatgttcataaactgttttaagcttatttccataagctctccaaga 50952355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 427
Target Start/End: Complemental strand, 21574584 - 21574515
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||||| | |||||||||||||||||| |||||||||||||| ||  ||||||||| || ||||||||||    
T  21574584 gggagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttatttccataagctctcca 21574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 427
Target Start/End: Complemental strand, 1816676 - 1816608
Alignment:
Q  359 ggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||||||||||||||| ||||||||| || |||||| |||||||  |||||||||| | ||||||||||    
T  1816676 ggagaacatatgaaaataacttatgacattttcataggctgttttcagcttattttgataagctctcca 1816608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 427
Target Start/End: Original strand, 3044249 - 3044304
Alignment:
Q  372 aaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    ||||||||||||| |||||||||||||||||  | |||||||||| ||||||||||    
T  3044249 aaacaacttatgacatgttcataagctgttttcaacttattttcataagctctcca 3044304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 430
Target Start/End: Original strand, 30573892 - 30573962
Alignment:
Q  360 gagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||| ||||||||||| |||||  |||||||||||||||||  ||||||| ||||  ||||||||||||    
T  30573892 gagaacttatgaaaacaaattatggcatgttcataagctgttttcagcttatgttcatcagctctccaaga 30573962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 430
Target Start/End: Complemental strand, 21367762 - 21367689
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatat-gttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||| |||||||||| ||||||| || ||||| |||||||||  |||||||||||| ||| |||||||||    
T  21367762 gggagaacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaaga 21367689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 430
Target Start/End: Original strand, 24085314 - 24085386
Alignment:
Q  359 ggagaacatatgaaaacaacttatgata-tgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    ||||||| |||||||||| |||||| || |||||||| |||||||  |||||||||||| ||| |||||||||    
T  24085314 ggagaacttatgaaaacagcttatggtactgttcatacgctgttttcagcttattttcacaagttctccaaga 24085386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 432
Target Start/End: Complemental strand, 25925818 - 25925762
Alignment:
Q  376 aacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaagaaa 432  Q
    ||||||||| |||||||||||||||||  | |||||||||| |||||||||| ||||    
T  25925818 aacttatgacatgttcataagctgttttcaacttattttcataagctctccaggaaa 25925762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 430
Target Start/End: Complemental strand, 36139960 - 36139900
Alignment:
Q  370 gaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    ||||||| ||||||| ||||||| |||||||||  |||||||||||| ||||||| |||||    
T  36139960 gaaaacagcttatgacatgttcacaagctgttttcagcttattttcataagctcttcaaga 36139900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 424
Target Start/End: Complemental strand, 36101650 - 36101596
Alignment:
Q  370 gaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctct 424  Q
    ||||||| ||||||| ||||||| |||||||||  |||||||||||| |||||||    
T  36101650 gaaaacagcttatgacatgttcacaagctgttttcagcttattttcataagctct 36101596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 37273185 - 37273143
Alignment:
Q  177 tttcaacttatttccttaagctctccaagatagcatatgaaaa 219  Q
    ||||||||||||||| |||| ||||||||||||| ||||||||    
T  37273185 tttcaacttatttccataagttctccaagatagcttatgaaaa 37273143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 430
Target Start/End: Complemental strand, 47513749 - 47513675
Alignment:
Q  356 tcgggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    ||||||| || ||||||||||| |||||| | ||||||||| |||||  |  ||||||||| |||||||||||||    
T  47513749 tcgggaggacttatgaaaacaagttatgacacgttcataagttgttttcaatttattttcataagctctccaaga 47513675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 430
Target Start/End: Original strand, 402517 - 402590
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatat-gttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||| |||||||||| ||||||| || |||||||||||||||  |||||| ||||| ||| ||| |||||    
T  402517 gggagaacgtatgaaaacagcttatgacattgttcataagctgttttcagcttaatttcacaagttcttcaaga 402590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 416
Target Start/End: Complemental strand, 5391964 - 5391915
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttca 416  Q
    |||||||||| ||||||| |||||||||||||||||  | ||||||||||    
T  5391964 tatgaaaacagcttatgacatgttcataagctgttttcaacttattttca 5391915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 430
Target Start/End: Complemental strand, 40665500 - 40665451
Alignment:
Q  381 atgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||| |||||||||||||||||  |||||||||| | |||||||||||||    
T  40665500 atgacatgttcataagctgttttcagcttatttttataagctctccaaga 40665451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 44237570 - 44237521
Alignment:
Q  75 cctgtttcaattggtttatttgagtttatctatttgcataagtacttgtg 124  Q
    ||||||| |||||||||||||||||||||||| |  |||||| |||||||    
T  44237570 cctgtttaaattggtttatttgagtttatctactgacataagcacttgtg 44237521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 402
Target Start/End: Complemental strand, 45541662 - 45541621
Alignment:
Q  361 agaacatatgaaaacaacttatgatatgttcataagctgttt 402  Q
    ||||| |||||||||| ||||||| |||||||||||||||||    
T  45541662 agaacttatgaaaacagcttatgacatgttcataagctgttt 45541621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 430
Target Start/End: Original strand, 47249465 - 47249534
Alignment:
Q  361 agaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    ||||| ||||||||| |||||||| ||||||||||| |||||   ||||||||||| |||  ||||||||    
T  47249465 agaacttatgaaaaccacttatgacatgttcataagttgtttttggcttattttcataagtcctccaaga 47249534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 2825192 - 2825152
Alignment:
Q  183 cttatttccttaagctctccaagatagcatatgaaaataac 223  Q
    ||||||| | |||||||||||||||||| ||||||||||||    
T  2825192 cttattttcataagctctccaagatagcttatgaaaataac 2825152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 22667449 - 22667413
Alignment:
Q  183 cttatttccttaagctctccaagatagcatatgaaaa 219  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  22667449 cttatttccgtaagctctccaagatagcttatgaaaa 22667413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 22724088 - 22724052
Alignment:
Q  183 cttatttccttaagctctccaagatagcatatgaaaa 219  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  22724088 cttatttccgtaagctctccaagatagcttatgaaaa 22724052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 427
Target Start/End: Complemental strand, 24281132 - 24281072
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    ||||||||||||||||||||| | |||||| |||||  | |||| ||||| ||||||||||    
T  24281132 tatgaaaacaacttatgatatctccataagttgttttcaacttactttcataagctctcca 24281072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 411
Target Start/End: Original strand, 39723385 - 39723429
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttat 411  Q
    |||||||||| ||||||| |||||||||||||||||  |||||||    
T  39723385 tatgaaaacagcttatgacatgttcataagctgtttttagcttat 39723429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 49605781 - 49605833
Alignment:
Q  88 gtttatttgagtttatctatttgcataagtacttgtggaagtgtttgaaagag 140  Q
    ||||||||||||||||||  | |||||||||||||||  ||||||||| ||||    
T  49605781 gtttatttgagtttatcttctagcataagtacttgtgagagtgtttgagagag 49605833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 416
Target Start/End: Complemental strand, 30535656 - 30535599
Alignment:
Q  359 ggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttca 416  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||  || |||||||||    
T  30535656 ggagaacttatgaaaacaacttatgatatgttcgtaagctgttttcaggttattttca 30535599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 416
Target Start/End: Original strand, 15740390 - 15740445
Alignment:
Q  361 agaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttca 416  Q
    ||||| |||||||||||||||||| |||||||||||||||||  | ||||||||||    
T  15740390 agaacttatgaaaacaacttatgacatgttcataagctgtttttaacttattttca 15740445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 430
Target Start/End: Original strand, 25670571 - 25670634
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||||||||||||| ||||| ||||  |||||  |||||||||||| |||||||||||||    
T  25670571 tatgaaaacaacttatgacatgttaataaattgttttcagcttattttcacaagctctccaaga 25670634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 430
Target Start/End: Complemental strand, 21248011 - 21247947
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttca-aaagctctccaaga 430  Q
    |||| ||| ||||||||| ||||||||||| ||||| |||||||||||||  |||||||||||||    
T  21248011 tatggaaataacttatgacatgttcataagttgttttaagcttattttcagtaagctctccaaga 21247947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 427
Target Start/End: Complemental strand, 46082121 - 46082061
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||||||||||||||||| |||  |||||| |||||  |||||||||||| ||||||||||    
T  46082121 tatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataagctctcca 46082061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 412
Target Start/End: Complemental strand, 11048118 - 11048067
Alignment:
Q  361 agaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttatt 412  Q
    ||||| ||| |||||||||||||| |||||||||||||||||  ||||||||    
T  11048118 agaacttatcaaaacaacttatgacatgttcataagctgttttcagcttatt 11048067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 411
Target Start/End: Complemental strand, 19719098 - 19719047
Alignment:
Q  360 gagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttat 411  Q
    |||||| |||||||||||||||||| |||||||||| ||||||  |||||||    
T  19719098 gagaacttatgaaaacaacttatgacatgttcataaactgttttcagcttat 19719047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 25596084 - 25596042
Alignment:
Q  177 tttcaacttatttccttaagctctccaagatagcatatgaaaa 219  Q
    ||||||||||||| | |||||||||||||||||| ||||||||    
T  25596084 tttcaacttattttcataagctctccaagatagcttatgaaaa 25596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 428
Target Start/End: Original strand, 36598341 - 36598402
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaa 428  Q
    |||| ||||| ||||||| |||||||||||||||||  |||||||||  ||| |||||||||    
T  36598341 tatggaaacatcttatgacatgttcataagctgttttcagcttatttcaaaacgctctccaa 36598402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 428
Target Start/End: Complemental strand, 7244760 - 7244704
Alignment:
Q  372 aaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaa 428  Q
    |||||| |||||| ||| ||||||| |||||  |||||||||||| |||||||||||    
T  7244760 aaacaatttatgacatgctcataagttgttttcagcttattttcataagctctccaa 7244704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 411
Target Start/End: Complemental strand, 11047948 - 11047908
Alignment:
Q  371 aaaacaacttatgatatgttcataagctgtttaaagcttat 411  Q
    |||||||||||||| |||||||||||||||||  |||||||    
T  11047948 aaaacaacttatgacatgttcataagctgtttttagcttat 11047908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 36538000 - 36537944
Alignment:
Q  360 gagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttca 416  Q
    |||||| |||| ||||||||||||| ||||||||||| |||||  ||||| ||||||    
T  36538000 gagaacttatggaaacaacttatgacatgttcataagttgtttttagctttttttca 36537944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 411
Target Start/End: Original strand, 43219789 - 43219833
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttat 411  Q
    |||||||||| ||||||| |||||||||||||||||  |||||||    
T  43219789 tatgaaaacagcttatgacatgttcataagctgtttttagcttat 43219833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 427
Target Start/End: Complemental strand, 15120277 - 15120208
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    |||||| | |||| ||||||||||||| |||||||| |||||||| ||||||||||| | ||||||||||    
T  15120277 gggagagcttatggaaacaacttatgacatgttcattagctgttttaagcttattttgataagctctcca 15120208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 34652055 - 34652097
Alignment:
Q  177 tttcaacttatttccttaagctctccaagatagcatatgaaaa 219  Q
    ||||||||||||||| |||||||||||||||||| ||||||||    
T  34652055 tttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 430
Target Start/End: Complemental strand, 16451213 - 16451140
Alignment:
Q  358 gggagaacatatgaaaacaacttatgata-tgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||| |||||||||||||||||| | ||||||| ||||||||  ||||||||||||  || |||||||||    
T  16451213 gggagaacttatgaaaacaacttatgacattgttcatgagctgttttcagcttattttcacgagttctccaaga 16451140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 425
Target Start/End: Complemental strand, 1647327 - 1647263
Alignment:
Q  361 agaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctc 425  Q
    ||||| |||||||||| ||||||| ||| |||||||||||||  ||||||||| || ||||||||    
T  1647327 agaacttatgaaaacagcttatgacatgctcataagctgttttcagcttatttccataagctctc 1647263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 430
Target Start/End: Complemental strand, 8017528 - 8017456
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||   || |||||||| ||| |||||||||    
T  8017528 gggagaacttatgaaaacagcttatgatatgttcataatttgttttctgcgtattttcataagttctccaaga 8017456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 400
Target Start/End: Original strand, 16398449 - 16398489
Alignment:
Q  360 gagaacatatgaaaacaacttatgatatgttcataagctgt 400  Q
    ||||||||||||||||||||||||| |||| ||||||||||    
T  16398449 gagaacatatgaaaacaacttatgacatgtccataagctgt 16398489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 430
Target Start/End: Original strand, 35379001 - 35379064
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||||| || ||||  |||||||||| |||||  |||||||||||| |||||||||||||    
T  35379001 tatgaaaacagctgatgacttgttcataagttgttttcagcttattttcataagctctccaaga 35379064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 16867790 - 16867748
Alignment:
Q  177 tttcaacttatttccttaagctctccaagatagcatatgaaaa 219  Q
    ||||||||||||||| |||||||||||||||||| | ||||||    
T  16867790 tttcaacttatttccataagctctccaagatagcttgtgaaaa 16867748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 428
Target Start/End: Original strand, 28677635 - 28677705
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaa 428  Q
    |||||||| |||||||||| ||||||| || |||||||| |||||   |||||||| || |||||||||||    
T  28677635 gggagaacttatgaaaacagcttatgacattttcataagttgttttcggcttatttccataagctctccaa 28677705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 430
Target Start/End: Original strand, 34652026 - 34652084
Alignment:
Q  372 aaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    ||||||||||||| |||| ||||||||||||  | ||||||| || |||||||||||||    
T  34652026 aaacaacttatgacatgtccataagctgttttcaacttatttccataagctctccaaga 34652084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 430
Target Start/End: Complemental strand, 4607020 - 4606947
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatat-gttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||| | |||||||||||||||| || |||||| ||||| ||  |||||||||||| ||| |||||||||    
T  4607020 gggagaacttgtgaaaacaacttatgacattgttcatgagctgcttttagcttattttcataagttctccaaga 4606947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 413
Target Start/End: Complemental strand, 13220525 - 13220472
Alignment:
Q  360 gagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattt 413  Q
    |||||| ||| ||||||||||||||  |||||||||||||||| || |||||||    
T  13220525 gagaacttataaaaacaacttatgacttgttcataagctgttttaaacttattt 13220472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 430
Target Start/End: Original strand, 14451037 - 14451098
Alignment:
Q  369 tgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||||||||||| |||  ||||||||||||  ||||||||| || ||||| |||||||    
T  14451037 tgaaaacaacttatgacatgaccataagctgttttcagcttatttccacaagctatccaaga 14451098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 419
Target Start/End: Original strand, 1494431 - 1494483
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaa 419  Q
    |||||||||| ||||||| |||| ||||| ||||||  |||||||||||||||    
T  1494431 tatgaaaacagcttatgacatgtccataaactgtttttagcttattttcaaaa 1494483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 1801762 - 1801722
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagct 398  Q
    |||||||| |||||||||| ||||||| |||||||||||||    
T  1801762 gggagaacttatgaaaacagcttatgacatgttcataagct 1801722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 414
Target Start/End: Original strand, 2091014 - 2091066
Alignment:
Q  362 gaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttatttt 414  Q
    |||| |||||| ||| ||||||||||| |||||||||||||  ||||||||||    
T  2091014 gaacttatgaatacagcttatgatatggtcataagctgttttcagcttatttt 2091066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 430
Target Start/End: Original strand, 12313149 - 12313221
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||  |||||||||| ||||||  ||||||||||| || ||  | |||||||||| |||||||||||||    
T  12313149 gggagaatttatgaaaacagcttatgccatgttcataagttgatttcaccttattttcataagctctccaaga 12313221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 393
Target Start/End: Original strand, 15870283 - 15870311
Alignment:
Q  365 catatgaaaacaacttatgatatgttcat 393  Q
    |||||||||||||||||||||||||||||    
T  15870283 catatgaaaacaacttatgatatgttcat 15870311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 428
Target Start/End: Complemental strand, 24347814 - 24347746
Alignment:
Q  360 gagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaa 428  Q
    |||||| ||||||| |||||||||||| ||||||||||  | |  |||||||||||| ||| |||||||    
T  24347814 gagaacttatgaaagcaacttatgataggttcataagccatattcagcttattttcataagttctccaa 24347746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 430
Target Start/End: Complemental strand, 36043990 - 36043926
Alignment:
Q  367 tatgaaaacaacttatgatat-gttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    ||||||||||||||| || || |||||||||||||||  |||| | ||||| |||||||||||||    
T  36043990 tatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctctccaaga 36043926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 324
Target Start/End: Complemental strand, 43808509 - 43808473
Alignment:
Q  288 tatatgatacgcgcttatgatataagcacttaattaa 324  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  43808509 tatatgatacgcgcttatgctataaacacttaattaa 43808473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 9615 - 9671
Alignment:
Q  360 gagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttca 416  Q
    |||||| |||||||||||||||| | |||||||||||||||||  ||||||||||||    
T  9615 gagaacttatgaaaacaacttattacatgttcataagctgtttttagcttattttca 9671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 20936214 - 20936274
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctcca 427  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||| || || |||||||    
T  20936214 tatgaaaacaacttatgatatgttcataagctgttttcaccttatttccataatctctcca 20936274  T

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Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 413
Target Start/End: Original strand, 22662223 - 22662278
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattt 413  Q
    |||||||| |||||||| ||||||||||||||||||||||| |||  |||||||||    
T  22662223 gggagaacttatgaaaaaaacttatgatatgttcataagctattttcagcttattt 22662278  T

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Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 30632037 - 30631987
Alignment:
Q  371 aaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagc 421  Q
    |||||||||||||  ||||||||||||||||| |||||||||| |||||||    
T  30632037 aaaacaacttatggcatgttcataagctgttttaagcttatttccaaaagc 30631987  T

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Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 679803 - 679746
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctct 424  Q
    |||||||||| |||||||||||||||||| ||||||  ||| |||||||| |||||||    
T  679803 tatgaaaacatcttatgatatgttcataaactgttttcagcatattttcataagctct 679746  T

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Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 430
Target Start/End: Original strand, 30066745 - 30066814
Alignment:
Q  361 agaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||| ||||||||||| ||||| |||||||||||| ||||||  ||||| |||| | |||||||||||||    
T  30066745 agaaaatatgaaaacagcttataatatgttcataatctgttttcagcttgtttttataagctctccaaga 30066814  T

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Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 430
Target Start/End: Original strand, 17822841 - 17822913
Alignment:
Q  359 ggagaacatatgaaaacaacttatgata-tgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||||||||||||| ||||||| | | |||||||||| |||  |||||||||||| ||| |||||||||    
T  17822841 ggagaacatatgaaaacagcttatgacatttttcataagctttttttagcttattttcataagttctccaaga 17822913  T

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Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 398
Target Start/End: Original strand, 22666702 - 22666742
Alignment:
Q  358 gggagaacatatgaaaacaacttatgatatgttcataagct 398  Q
    |||||||| |||||||| |||||||||||||||||||||||    
T  22666702 gggagaacttatgaaaaaaacttatgatatgttcataagct 22666742  T

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Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 402
Target Start/End: Complemental strand, 1966026 - 1965991
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgttt 402  Q
    |||||||||||||||||| |||||||||||||||||    
T  1966026 tatgaaaacaacttatgacatgttcataagctgttt 1965991  T

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Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 430
Target Start/End: Complemental strand, 2996658 - 2996595
Alignment:
Q  367 tatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctccaaga 430  Q
    |||||||||||||||||| |||| |||||||| |||  | |||||||||| | |||||||||||    
T  2996658 tatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaaga 2996595  T

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Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 414
Target Start/End: Complemental strand, 25571353 - 25571298
Alignment:
Q  359 ggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttatttt 414  Q
    ||||||| |||| |||||  ||||||||||||||||||||||||  ||||||||||    
T  25571353 ggagaacttatggaaacagtttatgatatgttcataagctgttttcagcttatttt 25571298  T

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Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 248
Target Start/End: Original strand, 54462156 - 54462199
Alignment:
Q  205 gatagcatatgaaaataacatatgaaaatagtttgtctttattt 248  Q
    |||||| |||||||| ||||||||||||||||||| ||||||||    
T  54462156 gatagcttatgaaaacaacatatgaaaatagtttgactttattt 54462199  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 425
Target Start/End: Complemental strand, 1137805 - 1137739
Alignment:
Q  359 ggagaacatatgaaaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctctc 425  Q
    ||||||| |||||||||| ||||||| ||||||||||| |||||  || |||||| || ||||||||    
T  1137805 ggagaacttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataagctctc 1137739  T

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Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 28300318 - 28300362
Alignment:
Q  177 tttcaacttatttccttaagctctccaagatagcatatgaaaata 221  Q
    ||||||||||||| | |||||||| ||||||||| ||||||||||    
T  28300318 tttcaacttattttcataagctcttcaagatagcctatgaaaata 28300362  T

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Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 424
Target Start/End: Complemental strand, 29263450 - 29263398
Alignment:
Q  372 aaacaacttatgatatgttcataagctgtttaaagcttattttcaaaagctct 424  Q
    ||||| ||||||||||||||||||| |||||  ||||||||| || |||||||    
T  29263450 aaacagcttatgatatgttcataagttgttttcagcttatttccacaagctct 29263398  T

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